View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15918_low_8 (Length: 324)
Name: NF15918_low_8
Description: NF15918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15918_low_8 |
 | |
|
| [»] chr6 (40 HSPs) |
| |
|
| [»] chr1 (3 HSPs) |
| |
|
| [»] chr8 (1 HSPs) |
| |
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| [»] scaffold0003 (1 HSPs) |
| | |
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| [»] scaffold0419 (1 HSPs) |
| | |
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| [»] scaffold0277 (2 HSPs) |
| | |
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| [»] scaffold0349 (1 HSPs) |
| | |
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| [»] chr5 (1 HSPs) |
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| [»] scaffold0038 (2 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 211; Significance: 1e-115; HSPs: 40)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 23 - 324
Target Start/End: Original strand, 26803077 - 26803379
Alignment:
| Q |
23 |
tcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatggg-tccat |
121 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||| ||||| |||||||||||| |||||| ||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
26803077 |
tcgtcagcccttacatgttgctaattaccctgttggattgcactctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccat |
26803176 |
T |
|
| Q |
122 |
acggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttc |
221 |
Q |
| |
|
| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26803177 |
atggttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttc |
26803276 |
T |
|
| Q |
222 |
atgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaacaactggatcggaaattaagttagaccatgttag |
321 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||||||||| ||||||||||| ||| ||||||||||||||| | |||| |||||||| |||||| | |
|
|
| T |
26803277 |
atgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaacaactggattgaaaatcaagttagatcatgtttg |
26803376 |
T |
|
| Q |
322 |
tga |
324 |
Q |
| |
|
||| |
|
|
| T |
26803377 |
tga |
26803379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 21 - 324
Target Start/End: Complemental strand, 27705957 - 27705653
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatggg-tcc |
119 |
Q |
| |
|
||||| || |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||| ||| |
|
|
| T |
27705957 |
agtcgacatcccttacatgttgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcacttcttgatgagggacctgatgatggggtcc |
27705858 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
||| ||||||||||| ||| | ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27705857 |
atatggttggaatttttggcattggaggcttgggtaaatcaacacttgcaagagcaatttataattttgttgctgatcaatttgaaggtttatgttttct |
27705758 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaacaactggatcggaaattaagttagaccatgtt |
319 |
Q |
| |
|
|||||||||| |||||||||||||||| ||| ||||||||||||| ||||||||||| ||| ||||||||||||||||| |||| |||||||| |||||| |
|
|
| T |
27705757 |
tcatgatgtgagagagaattcagctcaaaatgacttgaaacatctccaagagaagcttcttctaaaaacaactggatcgaaaataaagttagatcatgtt |
27705658 |
T |
|
| Q |
320 |
agtga |
324 |
Q |
| |
|
|||| |
|
|
| T |
27705657 |
tgtga |
27705653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 21 - 324
Target Start/End: Original strand, 27679579 - 27679883
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatggg-tcc |
119 |
Q |
| |
|
||||| ||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||| | | ||||||| ||| |
|
|
| T |
27679579 |
agtcgacagcccttacatgttgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggatccgatgatggggtcc |
27679678 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
||| ||||||||||||||| | |||||| ||||| |||||||||||||||||| ||||||||||||||||| |||||||| ||||||| ||||||||| |
|
|
| T |
27679679 |
atatggttggaatttatggcattggaggtttggggaaatcaacacttgcaagacaaatctataattttgttgcagatcaattcgaaggttcatgttttct |
27679778 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaacaactggatcggaaattaagttagaccatgtt |
319 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||| || | |||||||||||||||||||||| |
|
|
| T |
27679779 |
tcatgatgtgagagagaattcagctcaaaataacttgaaatatctccaagagaagctccttttaaaaacaacaggtttggaaattaagttagaccatgtt |
27679878 |
T |
|
| Q |
320 |
agtga |
324 |
Q |
| |
|
||||| |
|
|
| T |
27679879 |
agtga |
27679883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 29 - 324
Target Start/End: Original strand, 26623908 - 26624204
Alignment:
| Q |
29 |
gcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatggg-tccatacggtt |
127 |
Q |
| |
|
||||||||||||||| || ||||| ||||| || ||||||| | |||||||||||| ||| ||||||||| | ||| ||| ||||||| |||||| |||| |
|
|
| T |
26623908 |
gcccttacatgttgctaaataccctgttggattacagtctcaactacaacaagtgaaatcacttcttgataatggatctgatgatggggtccatatggtt |
26624007 |
T |
|
| Q |
128 |
ggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatg |
227 |
Q |
| |
|
||||| ||||||| |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26624008 |
ggaatgtatgggattggaggcttgggcaaatcaacacttgcaagagcaatctataactttgttgctgatcaatttgaaggtttatgttttcttcatgatg |
26624107 |
T |
|
| Q |
228 |
tgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaacaactggatcggaaattaagttagaccatgttagtga |
324 |
Q |
| |
|
|| |||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
26624108 |
tgagagagaattcagctcaaaataacttgaaacatctccaagagaagctcctttttaaaacaactggattggaaattaagttggaccatgttagtga |
26624204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 29 - 324
Target Start/End: Original strand, 26729885 - 26730181
Alignment:
| Q |
29 |
gcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatggg-tccatacggtt |
127 |
Q |
| |
|
||||||||||||||| || ||||| ||||| || ||||||| | |||||||||||| ||| ||||||||| | ||| ||| ||||||| |||||| |||| |
|
|
| T |
26729885 |
gcccttacatgttgctaaataccctgttggattacagtctcaactacaacaagtgaaatcacttcttgataatggatctgatgatggggtccatatggtt |
26729984 |
T |
|
| Q |
128 |
ggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatg |
227 |
Q |
| |
|
||||| ||||||| |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26729985 |
ggaatgtatgggattggaggcttgggcaaatcaacacttgcaagagcaatctataactttgttgctgatcaatttgaaggtttatgttttcttcatgatg |
26730084 |
T |
|
| Q |
228 |
tgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaacaactggatcggaaattaagttagaccatgttagtga |
324 |
Q |
| |
|
|| |||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
26730085 |
tgagagagaattcagctcaaaataacttgaaacatctccaagagaagctcctttttaaaacaactggattggaaattaagttggaccatgttagtga |
26730181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 21 - 324
Target Start/End: Complemental strand, 27698139 - 27697835
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatggg-tcc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| || ||||||| ||||||| ||||| ||| |||||||| | ||| ||| ||||||| ||| |
|
|
| T |
27698139 |
agtcgtcagcccttacatgttgccaattaccctgttggattacagtctcaagtacaaagagtgaaatcaattcttgataatggatctgatgatggggtcc |
27698040 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
||| ||||||||||| ||||| |||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
27698039 |
atatggttggaatttttgggattggaggcttgggaaaatcaacacttgcaagagcaatctataatttggttgctgatcaatttgaaggtttatgttttct |
27697940 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaacaactggatcggaaattaagttagaccatgtt |
319 |
Q |
| |
|
|||| ||||| || |||||||||| | ||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
27697939 |
tcataatgtgagaatgaattcagctaaaaataacttggaacatctccaagagaagctcctttttaaaacaactggatcggaaattaatttagaccatgtt |
27697840 |
T |
|
| Q |
320 |
agtga |
324 |
Q |
| |
|
||||| |
|
|
| T |
27697839 |
agtga |
27697835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 29 - 324
Target Start/End: Original strand, 31285196 - 31285492
Alignment:
| Q |
29 |
gcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatggg-tccatacggtt |
127 |
Q |
| |
|
|||||||||||||||||||||||| ||||| || ||| |||| |||||||||||| || |||||||||| ||| | || | | ||| | || | ||| |
|
|
| T |
31285196 |
gcccttacatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtacacatggta |
31285295 |
T |
|
| Q |
128 |
ggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatg |
227 |
Q |
| |
|
||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||| || ||||||||||||||||||| |
|
|
| T |
31285296 |
ggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttattggtgatcaatttgacggattatgttttcttcatgatg |
31285395 |
T |
|
| Q |
228 |
tgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaacaactggatcggaaattaagttagaccatgttagtga |
324 |
Q |
| |
|
|| |||||||||||||| | ||||||||||||||||| ||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
31285396 |
tgagagagaattcagctaaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttagaccatgttagtga |
31285492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 21 - 281
Target Start/End: Complemental strand, 27427165 - 27426904
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatggg-tcc |
119 |
Q |
| |
|
||||| ||| ||||||||||||||| |||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||| |
|
|
| T |
27427165 |
agtcgacagtccttacatgttgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggacctgatgatggggtcc |
27427066 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27427065 |
atatggttggaatttatgggattggaggctcaggtaaatcaacacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttct |
27426966 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttt |
281 |
Q |
| |
|
| | | || |||||||||||||| |||| |||||||| | | || |||| |||||||| |
|
|
| T |
27426965 |
tgaacaagtcagagagaattcagcttcaaatagcttgaaacgtttccaggagatgctccttt |
27426904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 21 - 289
Target Start/End: Complemental strand, 27718052 - 27717783
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatgg-gtcc |
119 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| || ||| |||||| |||| |
|
|
| T |
27718052 |
agtcgtcaacccttacatgttgccaattaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaaagatctgatgatggagtcc |
27717953 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
| | ||| ||| ||||||| |||||||| |||||||||||||||||||||| ||| || ||||||||| ||||||||||||||||| | | ||||||||| |
|
|
| T |
27717952 |
acatggtaggactttatggtactggaggattgggtaaatcaacacttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttct |
27717853 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
| | ||||| ||||||||||| || ||||| |||||||||||||| || ||||||||||||||||| |
|
|
| T |
27717852 |
tgaaaatgtgagagagaattcaacttcaaataaattgaaacatcttcagaaggagctccttttaaaaaca |
27717783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 21 - 289
Target Start/End: Original strand, 28786867 - 28787136
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatgg-gtcc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| ||| ||| |||||| |||| |
|
|
| T |
28786867 |
agtcgtcagcccttacatgttgccaattaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaaggatctgatgatggagtcc |
28786966 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
| ||| ||| ||||||| |||||||||||||||||||||||||||| || ||| || ||||||||| || |||||||||||||| | | ||||||||| |
|
|
| T |
28786967 |
gcatggtaggactttatggtactggaggcttgggtaaatcaacacttggaaaagcaatttataattttatttctgatcaatttgaatgctcatgttttct |
28787066 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
| | ||||| |||||||||||||| ||||| ||||||||||| || ||| |||||||||||||||| |
|
|
| T |
28787067 |
tgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggtgctccttttaaaaaca |
28787136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 21 - 289
Target Start/End: Complemental strand, 27604257 - 27603988
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatgg-gtcc |
119 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||| ||| ||||||||||| || ||| |||||| |||| |
|
|
| T |
27604257 |
agtcgtcagcccttacatgttgccaattatcctattggattgcagtctcgagtacaacaagtgaaatctcttcttgatgaaagatctgatgatggagtcc |
27604158 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
| | ||| ||| ||||||| |||||||| |||||||||||||||||||||| ||| || ||||||||| ||||||||||||||||| | | ||||||||| |
|
|
| T |
27604157 |
acatggtaggactttatggtactggaggattgggtaaatcaacacttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttct |
27604058 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
| | ||||| |||||||||||||| ||||| ||||||||||| || ||| ||||||||||||||||| |
|
|
| T |
27604057 |
tgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggagctccttttaaaaaca |
27603988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 21 - 289
Target Start/End: Complemental strand, 27610673 - 27610404
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatgg-gtcc |
119 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||| |||||||||| ||||||| |||||| ||||||||||||||| || ||| |||||| |||| |
|
|
| T |
27610673 |
agtcgtcaacccttacatgttgccaattaccctgttggattgcagtctcaagtacaagaagtgaaatcgcttcttgatgaaagatctgatgatggagtcc |
27610574 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
| | ||| ||| ||||||| |||||||| |||||||||||||||||||||| ||| || ||||||||| ||||||||||||||||| | | ||||||||| |
|
|
| T |
27610573 |
acatggtaggactttatggtactggaggattgggtaaatcaacacttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttct |
27610474 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
| | ||||| ||||||||||| || ||||| |||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
27610473 |
tgaaaatgtgagagagaattcaacttcaaataaattgaaacatcttcaggaggagctccttttaaaaaca |
27610404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 21 - 289
Target Start/End: Original strand, 28792988 - 28793257
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatgg-gtcc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| ||| ||| |||||| |||| |
|
|
| T |
28792988 |
agtcgtcagcccttacatgttgccaattaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaaggatctgatgatggagtcc |
28793087 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
| ||| ||| ||||||| |||||||||||||||||||||||||||| || ||| || ||||||||| || |||||||||||||| | | ||||||||| |
|
|
| T |
28793088 |
gcatggtaggactttatggtactggaggcttgggtaaatcaacacttggaaaagcaatttataattttatttctgatcaatttgaatgctcatgttttct |
28793187 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
| | ||||| |||||| ||||||| |||| ||||||||||| || ||| |||||||||||||||| |
|
|
| T |
28793188 |
tgaaaatgtgagagagagttcagcttcaaatagattgaaacatctccaggaggtgctccttttaaaaaca |
28793257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 21 - 289
Target Start/End: Complemental strand, 27592574 - 27592305
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatggg-tcc |
119 |
Q |
| |
|
||||| ||||||||| ||||||||| |||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| ||| ||| | ||||| ||| |
|
|
| T |
27592574 |
agtcgacagcccttaaatgttgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaaggatctgatcatggggtcc |
27592475 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
||| ||||||||||||||||| |||||||||||| |||||||||||||| | ||| || ||||| ||| ||||||||||||||||| | | ||||||||| |
|
|
| T |
27592474 |
atatggttggaatttatgggattggaggcttgggaaaatcaacacttgcgaaagcaatttataactttattgctgatcaatttgaatgctcatgttttct |
27592375 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
| | ||||| ||||| ||||||| |||||||||||| |||| || || ||||||||||||||||| |
|
|
| T |
27592374 |
tgaaaatgtgaaagagagttcagcttcaaataacttgaaaaatctccagcaggagctccttttaaaaaca |
27592305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 30 - 289
Target Start/End: Complemental strand, 27677164 - 27676904
Alignment:
| Q |
30 |
cccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatggg-tccatacggttg |
128 |
Q |
| |
|
|||||||||||||||| |||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||| ||| ||| | ||||| |||||| ||||| |
|
|
| T |
27677164 |
cccttacatgttgccacttaccctgttggattgcagtctcgagtacaacaaatgaaatcgcttcttgatgaaggatctgatcatggggtccatatggttg |
27677065 |
T |
|
| Q |
129 |
gaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgt |
228 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||||| | ||| || ||||||||| ||||||||||||||||| | | |||||||||| | |||| |
|
|
| T |
27677064 |
gaatttatgggattggaggcttgggaaaatcaacacttgcgaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgt |
27676965 |
T |
|
| Q |
229 |
gcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
| ||||| ||||||| |||||||||||| |||| || || ||||||||||||||||| |
|
|
| T |
27676964 |
gaaagagagttcagcttcaaataacttgaaaaatctccagcaggagctccttttaaaaaca |
27676904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 33 - 288
Target Start/End: Original strand, 26656606 - 26656862
Alignment:
| Q |
33 |
ttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatg-ggtccatacggttggaa |
131 |
Q |
| |
|
|||||||||||||| ||||| ||||| || ||||||||||||||||||||| || |||||||||| ||||| || |||| ||| | | ||| ||| |
|
|
| T |
26656606 |
ttacatgttgccaaataccctgttggattagagtctcgagtacaacaagtgaaattgcttcttgataagggatctaaggatgaggttctcatggtaggac |
26656705 |
T |
|
| Q |
132 |
tttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgcg |
231 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||| | ||| || ||||||||||| |||||||||||||||||| ||||||||||||| |||| | |
|
|
| T |
26656706 |
tttatggtactggaggcatgggtaaatcaacacttgccaaagcaatttataattttgtcgctgatcaatttgaaggtgtatgttttcttcacaatgtcag |
26656805 |
T |
|
| Q |
232 |
agagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaac |
288 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| || ||| ||||||||| |||||| |
|
|
| T |
26656806 |
agagaattcagctcataataatttgaaacatctccaggaggagctcctttcaaaaac |
26656862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 33 - 288
Target Start/End: Original strand, 26762577 - 26762833
Alignment:
| Q |
33 |
ttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatg-ggtccatacggttggaa |
131 |
Q |
| |
|
|||||||||||||| ||||| ||||| || ||||||||||||||||||||| || |||||||||| ||||| || |||| ||| | | ||| ||| |
|
|
| T |
26762577 |
ttacatgttgccaaataccctgttggattagagtctcgagtacaacaagtgaaattgcttcttgataagggatctaaggatgaggttctcatggtaggac |
26762676 |
T |
|
| Q |
132 |
tttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgcg |
231 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||| | ||| || ||||||||||| |||||||||||||||||| ||||||||||||| |||| | |
|
|
| T |
26762677 |
tttatggtactggaggcatgggtaaatcaacacttgccaaagcaatttataattttgtcgctgatcaatttgaaggtgtatgttttcttcacaatgtcag |
26762776 |
T |
|
| Q |
232 |
agagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaac |
288 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| || ||| ||||||||| |||||| |
|
|
| T |
26762777 |
agagaattcagctcataataatttgaaacatctccaggaggagctcctttcaaaaac |
26762833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 33 - 289
Target Start/End: Original strand, 26647120 - 26647377
Alignment:
| Q |
33 |
ttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatggg-tccatacggttggaa |
131 |
Q |
| |
|
|||||||| ||||| ||||| ||||| || |||| ||| || ||||||||| || |||||||||| | | | ||| ||| ||| |||||| ||| ||| |
|
|
| T |
26647120 |
ttacatgtagccaaataccctgttggattagagtcccgattagaacaagtgaaattgcttcttgataaagaatctgatgaaggggtccatatggtaggac |
26647219 |
T |
|
| Q |
132 |
tttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgcg |
231 |
Q |
| |
|
||||||| |||||||| |||||||||||||||||||| | ||| || |||||||||||||||||||||||||||||| |||| ||||||||| |||| | |
|
|
| T |
26647220 |
tttatggtactggaggtttgggtaaatcaacacttgccaaagcgatttataattttgttgctgatcaatttgaaggtgtatgctttcttcataatgtcag |
26647319 |
T |
|
| Q |
232 |
agagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || || ||||||||| ||||||| |
|
|
| T |
26647320 |
agagaattcagctcataataacttgaaacatctccagaaggagctcctttcaaaaaca |
26647377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 33 - 289
Target Start/End: Original strand, 26753088 - 26753345
Alignment:
| Q |
33 |
ttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatggg-tccatacggttggaa |
131 |
Q |
| |
|
|||||||| ||||| ||||| ||||| || |||| ||| || ||||||||| || |||||||||| | | | ||| ||| ||| |||||| ||| ||| |
|
|
| T |
26753088 |
ttacatgtagccaaataccctgttggattagagtcccgattagaacaagtgaaattgcttcttgataaagaatctgatgaaggggtccatatggtaggac |
26753187 |
T |
|
| Q |
132 |
tttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgcg |
231 |
Q |
| |
|
||||||| |||||||| |||||||||||||||||||| | ||| || |||||||||||||||||||||||||||||| |||| ||||||||| |||| | |
|
|
| T |
26753188 |
tttatggtactggaggtttgggtaaatcaacacttgccaaagcgatttataattttgttgctgatcaatttgaaggtgtatgctttcttcataatgtcag |
26753287 |
T |
|
| Q |
232 |
agagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || || ||||||||| ||||||| |
|
|
| T |
26753288 |
agagaattcagctcataataacttgaaacatctccagaaggagctcctttcaaaaaca |
26753345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 21 - 286
Target Start/End: Original strand, 28781730 - 28781996
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatgg-gtcc |
119 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||||| || ||||| |||||||||||||||| ||||||||||| ||| ||| || | |||| ||| |
|
|
| T |
28781730 |
agtcgtcagcacttacatgttgccaattaccctgttggattacagtcccgagtacaacaagtgaaatcgcttcttggtgaaggatatgataatggagtca |
28781829 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
| ||| ||| ||||||| |||||||||||||||||||||||||||| || ||| | ||||| || ||||||||||||||||| | | ||||||||| |
|
|
| T |
28781830 |
ggatggtaggactttatggtactggaggcttgggtaaatcaacacttgtaaaagcagtttataacttaattgctgatcaatttgaatgctcatgttttct |
28781929 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaa |
286 |
Q |
| |
|
| | ||||| |||||||||||||| ||||| ||||||||||| || ||| |||||||||||||| |
|
|
| T |
28781930 |
tgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggagctccttttaaaa |
28781996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 34 - 289
Target Start/End: Complemental strand, 27337635 - 27337379
Alignment:
| Q |
34 |
tacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatggg-tccatacggttggaat |
132 |
Q |
| |
|
|||| |||||||| ||||| ||||| || ||||| |||||||||||||| | || |||||||||||||| | ||| ||| ||| || | | ||| ||| | |
|
|
| T |
27337635 |
tacacgttgccaaataccctgttggattacagtcccgagtacaacaagtaaaattgcttcttgatgaggaatctgatgaaggggtcaacatggtaggact |
27337536 |
T |
|
| Q |
133 |
ttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgcga |
232 |
Q |
| |
|
|||||| ||| |||||||||| |||||||||||||||| ||| || |||||||| ||||||||||||||||||| |||| ||||||||| |||| || |
|
|
| T |
27337535 |
ttatggtactagaggcttgggaaaatcaacacttgcaaaagcaatttataatttcattgctgatcaatttgaaggagtatgctttcttcataatgttaga |
27337436 |
T |
|
| Q |
233 |
gagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
||||||||||||| ||| |||||||||||||| || || ||||||||| ||||||| |
|
|
| T |
27337435 |
gagaattcagctcgtaaaaacttgaaacatctccagaaggagctcctttcaaaaaca |
27337379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 34 - 289
Target Start/End: Complemental strand, 27398375 - 27398119
Alignment:
| Q |
34 |
tacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatggg-tccatacggttggaat |
132 |
Q |
| |
|
|||| |||||||| ||||| ||||| || ||||| |||||||||||||| | || |||||||||||||| | ||| ||| ||| || | | ||| ||| | |
|
|
| T |
27398375 |
tacacgttgccaaataccctgttggattacagtcccgagtacaacaagtaaaattgcttcttgatgaggaatctgatgaaggggtcaacatggtaggact |
27398276 |
T |
|
| Q |
133 |
ttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgcga |
232 |
Q |
| |
|
|||||| ||| |||||||||| |||||||||||||||| ||| || |||||||| ||||||||||||||||||| |||| ||||||||| |||| || |
|
|
| T |
27398275 |
ttatggtactagaggcttgggaaaatcaacacttgcaaaagcaatttataatttcattgctgatcaatttgaaggagtatgctttcttcataatgttaga |
27398176 |
T |
|
| Q |
233 |
gagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
||||||||||||| ||| |||||||||||||| || || ||||||||| ||||||| |
|
|
| T |
27398175 |
gagaattcagctcgtaaaaacttgaaacatctccagaaggagctcctttcaaaaaca |
27398119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 26884807 - 26884969
Alignment:
| Q |
128 |
ggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatg |
227 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||||||||||||| || |||||||||| ||| | | |
|
|
| T |
26884807 |
ggaatttatggtactggaggcttgggtaaatcaacacttgcaaaagcaatttataattatgttgctgatcaatttgaatgtgtatgttttctgcataaag |
26884906 |
T |
|
| Q |
228 |
tgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaacaa |
290 |
Q |
| |
|
| | ||||||||| |||||||||||||||||||||| || ||| | |||||||||||||||| |
|
|
| T |
26884907 |
tcagggagaattcaactcataataacttgaaacatctccaggaggaactccttttaaaaacaa |
26884969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 132 - 287
Target Start/End: Original strand, 25539284 - 25539439
Alignment:
| Q |
132 |
tttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgcg |
231 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||||| ||| | | |||||||||||||||||||||||||| | |||||||||||||| |||| | |
|
|
| T |
25539284 |
tttatggtactggaggcatgggtaaatcaacacttgcaaaagcagtttttaattttgttgctgatcaatttgaagttgtatgttttcttcataatgtcag |
25539383 |
T |
|
| Q |
232 |
agagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaa |
287 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||| |||||||||||| ||||| |
|
|
| T |
25539384 |
agagaattcaagtcataataacttgaaacatctccaaaagaagctcctttcaaaaa |
25539439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 289
Target Start/End: Original strand, 26862230 - 26862478
Alignment:
| Q |
42 |
gccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatggg-tccatacggttggaatttatggga |
140 |
Q |
| |
|
||||| ||||| ||||| || |||| |||||| ||||||||| || |||||||||| || | ||| ||| ||| | || | ||| ||| ||||||| | |
|
|
| T |
26862230 |
gccaaataccctgttggattaaagtcccgagtagaacaagtgaaattgcttcttgatatggaatctgatgaaggggtacacatggtaggactttatggta |
26862329 |
T |
|
| Q |
141 |
ctggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgcgagagaattc |
240 |
Q |
| |
|
|||||||| |||| |||||||||||||||| ||| || |||||||||||||| ||||||||||||||| |||||||||||||| | || |||||||||| |
|
|
| T |
26862330 |
ctggaggcatggggaaatcaacacttgcaaaagcaatttataattttgttgccgatcaatttgaaggtgtatgttttcttcataaagttagagagaattc |
26862429 |
T |
|
| Q |
241 |
agctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
| ||||||||| |||||||||||| || || |||| |||||||||||| |
|
|
| T |
26862430 |
aactcataatagcttgaaacatctccagaaggagcttcttttaaaaaca |
26862478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 21 - 311
Target Start/End: Complemental strand, 27530854 - 27530563
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatg-ggtcc |
119 |
Q |
| |
|
|||||| |||||||| |||||||||| || || ||||| || ||||| ||||||||||| |||| | || ||||||||| | ||| ||||| ||||| |
|
|
| T |
27530854 |
agtcgtgagcccttagatgttgccaaatatcctgttggattacagtcccgagtacaacatgtgaaagggcatcttgatgaaaaatctgatgatgaggtcc |
27530755 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
| | ||| ||| ||||||| ||||||||| | ||||||||||||||||||| ||| || |||||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
27530754 |
acatggtaggactttatggtactggaggcataggtaaatcaacacttgcaaaagcaatttataatttcattgctgatcaatttgaagttttatgttttct |
27530655 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaacaactggatcggaaattaagttag |
311 |
Q |
| |
|
| ||||| ||| |||||| || |||||||||||||||| |||||||| ||||||||||||||| | ||| ||| |||||||||| |
|
|
| T |
27530654 |
agaaaatgtgagagtgaattcgacttcagataacttgaaacatctccaagagaaactccttttaaaaacagttagattggacattaagttag |
27530563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 42 - 264
Target Start/End: Original strand, 25580372 - 25580595
Alignment:
| Q |
42 |
gccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatg-ggtccatacggttggaatttatggga |
140 |
Q |
| |
|
||||| ||||| ||||| || ||||| ||| || ||||||||| || ||||||||| ||| ||| |||| |||||| | ||| ||| ||||||| | |
|
|
| T |
25580372 |
gccaaataccctgttggattacagtcccgaatagaacaagtgaaattgcttcttgacatgggctctgaggatgtggtccacatggtaggactttatggta |
25580471 |
T |
|
| Q |
141 |
ctggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgcgagagaattc |
240 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||| ||| |
|
|
| T |
25580472 |
ctggaggcatgggtaaatcaacacttgcaaaagcagtttataattttgttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagatttc |
25580571 |
T |
|
| Q |
241 |
agctcataataacttgaaacatct |
264 |
Q |
| |
|
| || |||||||||||||||||| |
|
|
| T |
25580572 |
aattcttaataacttgaaacatct |
25580595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 140 - 289
Target Start/End: Original strand, 26143617 - 26143766
Alignment:
| Q |
140 |
actggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgcgagagaatt |
239 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| |
|
|
| T |
26143617 |
actggaggcatgggtaaatcaacacttgcaaaagcagtttataattttgttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaatt |
26143716 |
T |
|
| Q |
240 |
cagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
|| |||||||||| |||||||||| || || | |||||||||| |||| |
|
|
| T |
26143717 |
caagtcataataacctgaaacatctccaggaagatctccttttaagaaca |
26143766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 140 - 287
Target Start/End: Original strand, 25483808 - 25483955
Alignment:
| Q |
140 |
actggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgcgagagaatt |
239 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||| | | ||||||| |||||||||||||||||||| |||||||||||||| |||| ||||||||| |
|
|
| T |
25483808 |
actggaggcatgggtaaatcaacacttgcaaaagcagtttttaattttcttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaatt |
25483907 |
T |
|
| Q |
240 |
cagctcataataacttgaaacatcttcaagagaagctccttttaaaaa |
287 |
Q |
| |
|
|| |||||||||| |||||||||| ||| ||| |||||||| ||||| |
|
|
| T |
25483908 |
caagtcataataacctgaaacatctccaaaagatgctcctttcaaaaa |
25483955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 33 - 311
Target Start/End: Original strand, 26824460 - 26824739
Alignment:
| Q |
33 |
ttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatg-ggtccatacggttggaa |
131 |
Q |
| |
|
|||||||||||||| ||||| ||||| || ||||| |||||||||||||||| ||| ||||||||| | | | ||| ||||| |||||||| ||| ||| |
|
|
| T |
26824460 |
ttacatgttgccaaatacccggttggattacagtcccgagtacaacaagtgaaatctcttcttgataacgaatctgatgatgtggtccatatggtaggac |
26824559 |
T |
|
| Q |
132 |
tttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgcg |
231 |
Q |
| |
|
|||| || | |||||| || ||||||||||||||||||| ||| | | ||||| | |||||||| ||||||||| ||| ||||||||| | | ||| | |
|
|
| T |
26824560 |
tttacggtattggaggtttaggtaaatcaacacttgcaaaagcaacttttaattctattgctgataaatttgaagttttttgttttcttgagaacgtgag |
26824659 |
T |
|
| Q |
232 |
agagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaacaactggatcggaaattaagttag |
311 |
Q |
| |
|
||||||||||||| | || |||| || |||| |||||| | |||||||||||||||| |||| ||||||||||||| |
|
|
| T |
26824660 |
agagaattcagctaagcatggcttggaaaatctccaagagcaactccttttaaaaacaattggagaagaaattaagttag |
26824739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 33 - 241
Target Start/End: Complemental strand, 25492860 - 25492651
Alignment:
| Q |
33 |
ttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatgggt-ccatacggttggaa |
131 |
Q |
| |
|
|||||||||||||| ||||| ||||| || || || ||||||||||| |||| || |||||| ||||||| | ||| |||| || ||| | ||| ||| |
|
|
| T |
25492860 |
ttacatgttgccaaataccctgttggattacaatcccgagtacaacacgtgaaattgcttctagatgaggtatctgaggatgagttccacatggtaggac |
25492761 |
T |
|
| Q |
132 |
tttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgcg |
231 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||||| | | |||||||| || ||||||||||||||||||||||||||||||| |||||| | |
|
|
| T |
25492760 |
tttatggtactggaggcttaggtaaatcaacacttgcaaaatcaatctataacttcattgctgatcaatttgaaggtttatgttttctaggagatgtgag |
25492661 |
T |
|
| Q |
232 |
agagaattca |
241 |
Q |
| |
|
|||||||||| |
|
|
| T |
25492660 |
agagaattca |
25492651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 128 - 287
Target Start/End: Original strand, 26056659 - 26056818
Alignment:
| Q |
128 |
ggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatg |
227 |
Q |
| |
|
||||||| ||| || |||||| ||||||||||||||||||||| ||| | | ||||| | |||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
26056659 |
ggaatttttggtaccggaggcatgggtaaatcaacacttgcaaaagcagtttttaattctattgctgatcaatttgaaggtgtatgttttcttcataatg |
26056758 |
T |
|
| Q |
228 |
tgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaa |
287 |
Q |
| |
|
| ||||||||||| ||| ||| |||||||||||||| || |||||||||||| ||||| |
|
|
| T |
26056759 |
tcagagagaattcaactcttaagaacttgaaacatctccagaagaagctcctttcaaaaa |
26056818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 128 - 287
Target Start/End: Original strand, 26076629 - 26076788
Alignment:
| Q |
128 |
ggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatg |
227 |
Q |
| |
|
||||||| ||| || |||||| ||||||||||||||||||||| ||| | | ||||| | |||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
26076629 |
ggaatttttggtaccggaggcatgggtaaatcaacacttgcaaaagcagtttttaattctattgctgatcaatttgaaggtgtatgttttcttcataatg |
26076728 |
T |
|
| Q |
228 |
tgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaa |
287 |
Q |
| |
|
| ||||||||||| ||| ||| |||||||||||||| || |||||||||||| ||||| |
|
|
| T |
26076729 |
tcagagagaattcaactcttaagaacttgaaacatctccagaagaagctcctttcaaaaa |
26076788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 144 - 287
Target Start/End: Original strand, 25511645 - 25511788
Alignment:
| Q |
144 |
gaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgcgagagaattcagc |
243 |
Q |
| |
|
||||| ||||||||||||||||||||| ||| | | ||||| | ||||||||||||||||| || |||||||||||||| |||| ||||||||||| | |
|
|
| T |
25511645 |
gaggcatgggtaaatcaacacttgcaaaagcagtttttaattctattgctgatcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaac |
25511744 |
T |
|
| Q |
244 |
tcataataacttgaaacatcttcaagagaagctccttttaaaaa |
287 |
Q |
| |
|
|| ||| |||||||||||||| || |||||||||||| ||||| |
|
|
| T |
25511745 |
tcttaagaacttgaaacatctccagaagaagctcctttcaaaaa |
25511788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 131 - 244
Target Start/End: Original strand, 28140275 - 28140388
Alignment:
| Q |
131 |
atttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgc |
230 |
Q |
| |
|
|||||||||| ||||| | ||||||| ||||||||||| ||| || ||||||||| |||| |||||||||||| |||| |||||||||||| ||||| |
|
|
| T |
28140275 |
atttatgggatgggagggtcgggtaaaacaacacttgcacaagcaatttataattttattgccgatcaatttgaatgtttgtgttttcttcataatgtga |
28140374 |
T |
|
| Q |
231 |
gagagaattcagct |
244 |
Q |
| |
|
|||| | ||||||| |
|
|
| T |
28140375 |
gagaaatttcagct |
28140388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 27215202 - 27215322
Alignment:
| Q |
141 |
ctggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgcgagagaattc |
240 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||| || | |||||| |||||||||| |||||||||| || |||||| | |||||| ||||||||| |
|
|
| T |
27215202 |
ctggaggcatgggtaaatcaacacttgcaaaagcaatttttaatttcattgctgatcagtttgaaggttcatattttctagaagatgtgaaagagaattc |
27215301 |
T |
|
| Q |
241 |
agctcataataacttgaaaca |
261 |
Q |
| |
|
| || |||||||||||||| |
|
|
| T |
27215302 |
aactttaaataacttgaaaca |
27215322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 26937790 - 26937872
Alignment:
| Q |
152 |
ggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgcgaga |
234 |
Q |
| |
|
|||||||||||||||||| |||| || |||||||| ||| ||||||||||||| |||| |||||||||||| |||| ||||| |
|
|
| T |
26937790 |
ggtaaatcaacacttgcacgagcaatttataatttgattggtgatcaatttgaaagtttgtgttttcttcataatgtacgaga |
26937872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 29843429 - 29843338
Alignment:
| Q |
131 |
atttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttca |
222 |
Q |
| |
|
|||||||| | ||| || ||||||||| |||||||||| |||| || |||||||| |||||||| |||||||| |||| ||||||||||| |
|
|
| T |
29843429 |
atttatggaattggtggattgggtaaaacaacacttgctcgagcaatttataatttgattgctgataaatttgaatgtttgtgttttcttca |
29843338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 28243538 - 28243632
Alignment:
| Q |
134 |
tatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgt |
228 |
Q |
| |
|
||||||||||| || |||| || |||||||||||||||| | ||||||| | |||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
28243538 |
tatgggactggtggaatgggaaagacaacacttgcaagagcagtttataattccatagctgatcaatttgattgtttatgttttcttcacgatgt |
28243632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 28227720 - 28227789
Alignment:
| Q |
159 |
caacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgt |
228 |
Q |
| |
|
||||||||||||| || | ||||||||| | || ||||||||||| ||||| ||||||||||| ||||| |
|
|
| T |
28227720 |
caacacttgcaagggcagtttataattttatagccgatcaatttgatggtttgtgttttcttcacgatgt |
28227789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 21 - 324
Target Start/End: Complemental strand, 267893 - 267589
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatggg-tcc |
119 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||||| || ||||| |||||||||||||| || |||||||||| | ||| ||| ||||||| ||| |
|
|
| T |
267893 |
agtcgtgagcccttacatgttgccaattaccctgttggattatggtctcaagtacaacaagtgaaattgcttcttgataatggatctgatgatggggtcc |
267794 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
267793 |
atatggttggaatttatgggattggaggcttgggtaaatcaacccttgcaagagcaatctataattttattgctgatcaatttgaaggattatgttttct |
267694 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataa-taacttgaaacatcttcaagagaagctccttttaaaaacaactggatcggaaattaagttagaccatgt |
318 |
Q |
| |
|
|||||||||| |||| ||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
267693 |
tcatgatgtgagagaaaattcagct-ataagtaacttgaaacatctccaagagaagctccttttaaaaacaactggattggaaattaagttagaccatgt |
267595 |
T |
|
| Q |
319 |
tagtga |
324 |
Q |
| |
|
|||||| |
|
|
| T |
267594 |
tagtga |
267589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 32 - 311
Target Start/End: Complemental strand, 28127217 - 28126937
Alignment:
| Q |
32 |
cttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatg-ggtccatacggttgga |
130 |
Q |
| |
|
||||||||||||||| || || ||||| || ||| | |||||||||||||| | |||||| ||| ||||| || ||||| |||||| | ||| ||| |
|
|
| T |
28127217 |
cttacatgttgccaaatatcctgttggattacaggaccaagtacaacaagtgaatttgcttctcgataagggatatgatgatgaggtccacatggtagga |
28127118 |
T |
|
| Q |
131 |
atttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgc |
230 |
Q |
| |
|
||||||| | ||||||||||||||||||||||||||||| ||| || |||||||| ||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
28127117 |
ctttatggtattggaggcttgggtaaatcaacacttgcaaaagcaatttataatttcattgctgatcaatttgaaggtttatgttttctagaagatgtga |
28127018 |
T |
|
| Q |
231 |
gagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaacaactggatcggaaattaagttag |
311 |
Q |
| |
|
|||||| |||| ||| |||| ||||||||||| ||||| ||||||||||| |||||| ||||| ||| |||||||||| |
|
|
| T |
28127017 |
gagagatttcaactccatataatttgaaacatctccaagaaaagctccttttgaaaacagttggattggacattaagttag |
28126937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 33 - 241
Target Start/End: Complemental strand, 28163916 - 28163707
Alignment:
| Q |
33 |
ttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatg-ggtccatacggttggaa |
131 |
Q |
| |
|
||||||||||| || || || ||||| || || |||| |||||||||||||| || |||||| ||| ||||| || ||||| |||||| | ||| ||| |
|
|
| T |
28163916 |
ttacatgttgcaaaatatcctgttggattacaatctcaagtacaacaagtgaaattgcttctcgataagggatatgatgatgaggtccacatggtaggac |
28163817 |
T |
|
| Q |
132 |
tttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgcg |
231 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||| ||| || |||||||| ||||||||||||||||||||||||||||||| | |||||| | |
|
|
| T |
28163816 |
tttatgatactggaggcttgggtaaatcaacacttgcaaaagcaatttataatttcattgctgatcaatttgaaggtttatgttttctagaagatgtgag |
28163717 |
T |
|
| Q |
232 |
agagaattca |
241 |
Q |
| |
|
|||||||||| |
|
|
| T |
28163716 |
agagaattca |
28163707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 29 - 324
Target Start/End: Complemental strand, 29273383 - 29273087
Alignment:
| Q |
29 |
gcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatggg-tccatacggtt |
127 |
Q |
| |
|
|||||||||||||||||| ||||| ||||| || ||||||| |||||||||||| | ||||||||||||| | ||| ||| ||||||| |||||| |||| |
|
|
| T |
29273383 |
gcccttacatgttgccaaataccctgttggattacagtctcaagtacaacaagtcaaatcgcttcttgataatggatctgatgatgggatccatatggtt |
29273284 |
T |
|
| Q |
128 |
ggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatg |
227 |
Q |
| |
|
||||||||||||| ||| ||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
29273283 |
ggaatttatgggattggtggcttgggtaaatcaacccttgcaagagcaatctataatttttttgctgatcaatttgaagatttatgttttcttcatgatg |
29273184 |
T |
|
| Q |
228 |
tgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaacaactggatcggaaattaagttagaccatgttagtga |
324 |
Q |
| |
|
|| |||||||||||||| | ||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
29273183 |
tgagagagaattcagctaaaaataacttgaaacatctccaagagaaactccttttaaaaacaactggattggaaattaagttagatcatgttagtga |
29273087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 146; Significance: 7e-77; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 21 - 281
Target Start/End: Original strand, 60198 - 60459
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatggg-tcc |
119 |
Q |
| |
|
||||| ||| ||||||||||||||| |||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||| |
|
|
| T |
60198 |
agtcgacagtccttacatgttgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggacctgatgatggggtcc |
60297 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
60298 |
atatggttggaatttatgggattggaggctcaggtaaatcaacacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttct |
60397 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttt |
281 |
Q |
| |
|
| | | || |||||||||||||| |||| |||||||| | | || |||| |||||||| |
|
|
| T |
60398 |
tgaacaagtcagagagaattcagcttcaaatagcttgaaacgtttccaggagatgctccttt |
60459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 146; Significance: 7e-77; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 21 - 281
Target Start/End: Original strand, 18074390 - 18074651
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatggg-tcc |
119 |
Q |
| |
|
||||| ||| ||||||||||||||| |||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||| |
|
|
| T |
18074390 |
agtcgacagtccttacatgttgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggacctgatgatggggtcc |
18074489 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18074490 |
atatggttggaatttatgggattggaggctcaggtaaatcaacacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttct |
18074589 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttt |
281 |
Q |
| |
|
| | | || |||||||||||||| |||| |||||||| | | || |||| |||||||| |
|
|
| T |
18074590 |
tgaacaagtcagagagaattcagcttcaaatagcttgaaacgtttccaggagatgctccttt |
18074651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 21 - 289
Target Start/End: Complemental strand, 18679109 - 18678840
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatgg-gtcc |
119 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| || || |||||| |||| |
|
|
| T |
18679109 |
agtcggcagcccttacatgttgccaattaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaatgatcttatgatggagtcc |
18679010 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
| ||| ||| ||||||| | ||||||| ||||||||| ||||||||||| ||| || ||||||||| ||||||||||||||||| | | ||||||||| |
|
|
| T |
18679009 |
gcatggtaggactttatggcattggaggcatgggtaaattaacacttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttct |
18678910 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
| | ||||| |||||||||||||| ||| | ||||||||||| || ||| | ||||||||||||||| |
|
|
| T |
18678909 |
tgaaaatgtgagagagaattcagcttcaaatcaattgaaacatctccaggaggaactccttttaaaaaca |
18678840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 21 - 289
Target Start/End: Complemental strand, 18698949 - 18698680
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatgg-gtcc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| | ||||||||||| | ||| ||| |||||| |||| |
|
|
| T |
18698949 |
agtcgtcagcccttacatgttgccaattaccctgttggattgcagtctcgagtacaacaagtgaaagcgcttcttgataaaggatctgatgatggagtcc |
18698850 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
| | | ||| ||||||| | ||||||| ||||||||||||||||||| | ||| || ||||||||| ||||||||||||||||| | | ||||||||| |
|
|
| T |
18698849 |
gcatgttaggactttatggcattggaggcatgggtaaatcaacacttgcgaaagcaatttataattttattgctgatcaatttgaatgctcatgttttct |
18698750 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
| | ||||| |||||||||||||| ||| | ||||||||||| || ||| | ||||||||||||||| |
|
|
| T |
18698749 |
tgaaaatgtgagagagaattcagcttcaaatcaattgaaacatctccaggaggaactccttttaaaaaca |
18698680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 21 - 289
Target Start/End: Complemental strand, 18723634 - 18723365
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatgg-gtcc |
119 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||| | ||| || || ||| |||| |
|
|
| T |
18723634 |
agtcgtcagcccttacatgttgccacttaccctgttgggttgcagtctcgagtacaacaagtgaaatcgcttcttgataaaggatctaatggtggagtcc |
18723535 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
| | | ||| ||||||| | ||||||| |||| |||||||||||||||| || || ||||||||| ||||||||||||||||| | | ||||||||| |
|
|
| T |
18723534 |
gcatgataggactttatggtattggaggcatgggaaaatcaacacttgcaaaaggaatttataattttattgctgatcaatttgaatgctcatgttttct |
18723435 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
| | | ||| |||||||||||||| ||| | ||||||||||| || ||| | ||||||||||||||| |
|
|
| T |
18723434 |
tgaaaacgtgagagagaattcagcttcaaatcaattgaaacatctccaggaggaactccttttaaaaaca |
18723365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 21 - 289
Target Start/End: Complemental strand, 18731053 - 18730784
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatgg-gtcc |
119 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||| | ||| || || ||| |||| |
|
|
| T |
18731053 |
agtcgtcagcccttacatgttgccatttaccctgttgggttgcagtctcgagtacaacaagtgaaatcgcttcttgataaaggatcttatggtggagtcc |
18730954 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
| | | ||| ||||||| | ||||||| |||| |||||||||||||| | || || ||||||||| ||||||||||||||||| | | ||||||||| |
|
|
| T |
18730953 |
gcatgataggactttatggtattggaggcatgggaaaatcaacacttgctaaagtaatttataattttattgctgatcaatttgaatgctcatgttttct |
18730854 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
| | ||||| |||||||||||||| ||| | ||||||||||| || ||| | ||||||||||||||| |
|
|
| T |
18730853 |
tgaaaatgtgagagagaattcagcttcaaatcaattgaaacatctccaggaggaactccttttaaaaaca |
18730784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 21 - 289
Target Start/End: Complemental strand, 18655026 - 18654757
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatgg-gtcc |
119 |
Q |
| |
|
||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||| | ||| ||| || ||| |||| |
|
|
| T |
18655026 |
agtcgtcagcccttacatgctgccagttaccctgttgggttgcagtctcgagtacaacaagtgaaatcgcttcttgataaaggatctgatggtggagtcc |
18654927 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
| | | ||| ||||||| | ||||||| |||| |||||||||||||||| | | || |||||| | ||||||||||||||||| | | ||||||||| |
|
|
| T |
18654926 |
gcatgataggactttatggtattggaggcatgggaaaatcaacacttgcaaaatcaattaataattgtattgctgatcaatttgaatgctcatgttttct |
18654827 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
| | ||||| |||| |||||| || ||| | ||||||||||| || ||| | ||||||||||||||| |
|
|
| T |
18654826 |
tgaaaatgtgagagaaaattcatcttcaaatcaattgaaacatctccaggaggaactccttttaaaaaca |
18654757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 21 - 289
Target Start/End: Original strand, 8116 - 8385
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatgg-gtcc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| |||| ||||||||||||||| ||| ||| |||||| |||| |
|
|
| T |
8116 |
agtcgtcagcccttacatgttgccaattaccctgttggattacagtctcgagtacaacatgtgaaatcgcttcttgatgaaggatctgatgatggagtcc |
8215 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
| | ||| ||| ||||||| |||||||||||||||||||||||||||| || ||| || ||||||||| || |||||||||||||| | | ||||||||| |
|
|
| T |
8216 |
acatggtaggactttatggtactggaggcttgggtaaatcaacacttggaaaagcaatttataattttatttctgatcaatttgaatgctcatgttttct |
8315 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
| | ||||| |||||||||||||| ||||| ||||||||||| || ||| | ||||||||||||||| |
|
|
| T |
8316 |
tgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggaactccttttaaaaaca |
8385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 126; Significance: 6e-65; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 21 - 289
Target Start/End: Complemental strand, 13228 - 12959
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatgg-gtcc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| |||| ||||||||||||||| ||| ||| |||||| |||| |
|
|
| T |
13228 |
agtcgtcagcccttacatgttgccaattaccctgttggattacagtctcgagtacaacatgtgaaatcgcttcttgatgaaggatctgatgatggagtcc |
13129 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
| | ||| ||| ||||||| |||||||||||||||||||||||||||| || ||| || ||||||||| || |||||||||||||| | | ||||||||| |
|
|
| T |
13128 |
acatggtaggactttatggtactggaggcttgggtaaatcaacacttggaaaagcaatttataattttatttctgatcaatttgaatgctcatgttttct |
13029 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
| | ||||| |||||||||||||| ||||| ||||||||||| || ||| | ||||||||||||||| |
|
|
| T |
13028 |
tgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggaactccttttaaaaaca |
12959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 21 - 289
Target Start/End: Complemental strand, 4265 - 3996
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatgg-gtcc |
119 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| ||||| || ||||||||||||||||| |||| ||||||||||||||| ||| ||| | |||| | || |
|
|
| T |
4265 |
agtcatcagcccttacatgttgccaattaccctgttggattacagtctcgagtacaacatgtgaaatcgcttcttgatgaaggatctgatcatggagccc |
4166 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
| | ||| ||| ||||||| |||||||||||||||||||||||||||| || ||| || ||||||||| |||||||| |||||||| | | ||||||||| |
|
|
| T |
4165 |
acatggtaggactttatggtactggaggcttgggtaaatcaacacttggaaaagcaatttataattttattgctgatgaatttgaatgctcatgttttct |
4066 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
| | ||||| |||||||||||||| ||||| ||||||||||| || ||| ||||||||||||||||| |
|
|
| T |
4065 |
tgaaaatgtgagagagaattcagcttcaaataaattgaaacatctccaggaggagctccttttaaaaaca |
3996 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 21 - 289
Target Start/End: Complemental strand, 3092 - 2823
Alignment:
| Q |
21 |
agtcgtcagcccttacatgttgccaattaccccgttgggttgcagtctcgagtacaacaagtgagatcgcttcttgatgagggacctgttgatgg-gtcc |
119 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||| || ||||||||||||||||||||| ||||||||||||||| || ||| |||||| |||| |
|
|
| T |
3092 |
agtcgtcaacccttacatgttgccaattaccctgttggaatgaagtctcgagtacaacaagtgaaatcgcttcttgatgaaagatctgatgatggagtcc |
2993 |
T |
|
| Q |
120 |
atacggttggaatttatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttct |
219 |
Q |
| |
|
| | ||| ||| ||||||| |||||||| |||||||||||||||||||||| ||| || ||||||||| ||||||||||||||||| | | ||||||||| |
|
|
| T |
2992 |
acatggtaggactttatggtactggaggattgggtaaatcaacacttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttct |
2893 |
T |
|
| Q |
220 |
tcatgatgtgcgagagaattcagctcataataacttgaaacatcttcaagagaagctccttttaaaaaca |
289 |
Q |
| |
|
| | ||||| |||||||||||||| ||||| |||||||||||||| | ||||||||||||||||| |
|
|
| T |
2892 |
tgaaaatgtgagagagaattcagcttcaaataaattgaaacatcttcagttggagctccttttaaaaaca |
2823 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 152 - 324
Target Start/End: Original strand, 16691628 - 16691800
Alignment:
| Q |
152 |
ggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgcgagagaattcagctcataata |
251 |
Q |
| |
|
|||||| |||||||||| |||| || |||||||| ||||||||||||||||| |||| |||||||||||||| ||| |||| |||||| || | || |
|
|
| T |
16691628 |
ggtaaaacaacacttgctcgagcaatttataatttgattgctgatcaatttgaatgtttgtgttttcttcatgacgtgagagaaaattcatctaaacatg |
16691727 |
T |
|
| Q |
252 |
acttgaaacatcttcaagagaagctccttttaaaaacaactggatcggaaattaagttagaccatgttagtga |
324 |
Q |
| |
|
||| ||||||||||||| | |||||||| ||||| | ||||| || |||||||||| ||||||||||| |
|
|
| T |
16691728 |
gcttagaacatcttcaagaaaggctcctttccaaaaccattggattagacattaagttaggacatgttagtga |
16691800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 3280418 - 3280511
Alignment:
| Q |
150 |
tgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgcgagagaattcagc |
243 |
Q |
| |
|
||||||| |||| ||||||||||| | |||||||| ||||| ||||||||||| || ||||||||||||| ||||| |||| |||||||| |
|
|
| T |
3280418 |
tgggtaagacaactcttgcaagagcagtttataatttcattgctaatcaatttgaatgtgtatgttttcttcacaatgtgagagaaaattcagc |
3280511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 43700 - 43794
Alignment:
| Q |
134 |
tatgggactggaggcttgggtaaatcaacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgt |
228 |
Q |
| |
|
||||||||||| || |||| || |||||||||||||||| | ||||||| | |||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
43700 |
tatgggactggtggaatgggaaagacaacacttgcaagagcagtttataattccatagctgatcaatttgattgtttatgttttcttcacgatgt |
43794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 28218 - 28287
Alignment:
| Q |
159 |
caacacttgcaagagctatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgt |
228 |
Q |
| |
|
||||||||||||| || | ||||||||| | || ||||||||||| ||||| ||||||||||| ||||| |
|
|
| T |
28218 |
caacacttgcaagggcagtttataattttatagccgatcaatttgatggtttgtgttttcttcacgatgt |
28287 |
T |
|
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