View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15919_high_5 (Length: 482)
Name: NF15919_high_5
Description: NF15919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15919_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 430; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 21 - 470
Target Start/End: Complemental strand, 41924630 - 41924181
Alignment:
| Q |
21 |
tccattactttctagctttgccaaaacctctttggccttttcaacctttcctaccttgcaaagtccattcaacaaagcattacaagtccactcatcgacc |
120 |
Q |
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| T |
41924630 |
tccattactttctagctttgccaaaatctctttggccttttcaacctttcctaccttgcacagtccattcaacaaagcattacaagtccactcatcgacc |
41924531 |
T |
|
| Q |
121 |
tgtgttccatttccatttaacaaaccattttcatttccacccatcaactgatcatcaaatacaagactcgaaaaccccccaggcaaaaaacctttccttt |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
41924530 |
tgtgttccatttccatttaacaaaccattttcatttccactcatcaactgatcatcaaatacaagactcgaaaaccccctaggcaaaaaacctttccttt |
41924431 |
T |
|
| Q |
221 |
ccatctccaacaacaccctcttagcatcttccaatctccccaaaccacaaagaccacttaacaagcaattgtaagtaacaacattagccttcgaatacgg |
320 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41924430 |
ccatctccaacaacaccctcttagcatcttccaatctccccaaaccacaaagaccacttaacaagcaattgtaagtaacaacattagccttcgaatacgg |
41924331 |
T |
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| Q |
321 |
accattcatcctagccctcaatctaaaagcttcgtctattccacccaccttacaatacccatcaataagcgtattaaaagtcacagtattaggaacaaca |
420 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41924330 |
accattcatcctagccctcaatctaaaagcttcgtctattccacccaccttacaatacccatcaataagcgtattaaaagtcacagtattaggaacaaca |
41924231 |
T |
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| Q |
421 |
tttctttgaatcatttcatcaaacaccttccttgcatcctttatattctt |
470 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
41924230 |
tttctttgaatcatttcatcaaacaccttccttgcatcctttattttctt |
41924181 |
T |
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