View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15919_low_1 (Length: 653)

Name: NF15919_low_1
Description: NF15919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15919_low_1
NF15919_low_1
[»] chr4 (115 HSPs)
chr4 (17-511)||(22882453-22882944)
chr4 (17-511)||(22934117-22934608)
chr4 (510-644)||(22882974-22883109)
chr4 (510-644)||(22934638-22934773)
chr4 (240-511)||(33089853-33090128)
chr4 (270-472)||(12073406-12073612)
chr4 (270-480)||(379385-379600)
chr4 (270-455)||(26699390-26699580)
chr4 (361-640)||(26364080-26364360)
chr4 (383-511)||(44570431-44570564)
chr4 (270-457)||(33989873-33990065)
chr4 (383-508)||(32091456-32091581)
chr4 (274-501)||(35662426-35662656)
chr4 (271-473)||(6655969-6656174)
chr4 (274-472)||(8665422-8665623)
chr4 (270-511)||(12119513-12119764)
chr4 (276-461)||(46703525-46703715)
chr4 (527-631)||(3785915-3786019)
chr4 (269-461)||(34112842-34113035)
chr4 (361-511)||(56178681-56178830)
chr4 (361-508)||(6677446-6677594)
chr4 (361-511)||(47038455-47038602)
chr4 (274-441)||(50673800-50673970)
chr4 (387-513)||(5349879-5350009)
chr4 (363-511)||(54199952-54200099)
chr4 (368-511)||(24969087-24969229)
chr4 (361-511)||(26175680-26175829)
chr4 (361-511)||(36994499-36994648)
chr4 (275-508)||(38811143-38811379)
chr4 (361-511)||(48893682-48893835)
chr4 (274-472)||(8648153-8648354)
chr4 (368-511)||(31474125-31474268)
chr4 (361-474)||(46147435-46147547)
chr4 (361-461)||(27417009-27417108)
chr4 (361-511)||(5429654-5429803)
chr4 (361-511)||(5871795-5871944)
chr4 (361-472)||(9927502-9927612)
chr4 (361-511)||(34570458-34570607)
chr4 (390-461)||(34788847-34788918)
chr4 (361-511)||(37740600-37740749)
chr4 (270-472)||(40632459-40632664)
chr4 (361-511)||(48143017-48143167)
chr4 (383-511)||(35369511-35369634)
chr4 (326-472)||(50262708-50262855)
chr4 (361-511)||(12745480-12745629)
chr4 (361-511)||(36463433-36463582)
chr4 (373-472)||(54883034-54883132)
chr4 (368-472)||(2209727-2209831)
chr4 (368-453)||(4587992-4588076)
chr4 (312-508)||(21703829-21704027)
chr4 (270-472)||(41639440-41639645)
chr4 (516-640)||(41961222-41961351)
chr4 (383-508)||(41961395-41961520)
chr4 (361-508)||(12739594-12739740)
chr4 (361-508)||(12747800-12747946)
chr4 (384-511)||(53345192-53345319)
chr4 (361-511)||(52095406-52095555)
chr4 (361-511)||(29999850-29999999)
chr4 (516-640)||(50674073-50674199)
chr4 (516-612)||(12073236-12073333)
chr4 (383-511)||(48142443-48142571)
chr4 (516-612)||(379223-379319)
chr4 (361-511)||(6542223-6542374)
chr4 (361-461)||(12743969-12744068)
chr4 (361-461)||(12744091-12744190)
chr4 (361-461)||(12745358-12745457)
chr4 (361-472)||(41964429-41964540)
chr4 (395-511)||(55085442-55085557)
chr4 (519-586)||(33089758-33089825)
chr4 (529-628)||(35370578-35370677)
chr4 (361-472)||(52467398-52467508)
chr4 (361-431)||(5370127-5370196)
chr4 (516-614)||(35662284-35662381)
chr4 (516-640)||(41964230-41964355)
chr4 (361-474)||(21688261-21688373)
chr4 (369-508)||(44967881-44968020)
chr4 (519-612)||(46703344-46703437)
chr4 (419-511)||(35370449-35370541)
chr4 (361-511)||(3913423-3913572)
chr4 (368-474)||(13992344-13992448)
chr4 (368-461)||(45687233-45687326)
chr4 (383-461)||(22628958-22629038)
chr4 (516-612)||(54882864-54882961)
chr4 (385-461)||(16422674-16422750)
chr4 (516-612)||(33989706-33989802)
chr4 (373-511)||(5207898-5208035)
chr4 (377-461)||(6199932-6200018)
chr4 (361-511)||(29254469-29254618)
chr4 (516-582)||(50262925-50262992)
chr4 (516-640)||(6655771-6655897)
chr4 (516-640)||(55085592-55085718)
chr4 (516-596)||(2209573-2209654)
chr4 (390-510)||(3677438-3677559)
chr4 (519-612)||(12119383-12119475)
chr4 (368-495)||(1122866-1122993)
chr4 (510-633)||(6200085-6200209)
chr4 (517-612)||(8665251-8665347)
chr4 (527-639)||(35369679-35369790)
chr4 (393-509)||(3739178-3739295)
chr4 (368-438)||(40975060-40975129)
chr4 (398-472)||(41639277-41639351)
chr4 (394-511)||(52082733-52082850)
chr4 (361-511)||(37229765-37229915)
chr4 (517-612)||(8647982-8648078)
chr4 (361-511)||(51337039-51337188)
chr4 (517-582)||(27417189-27417255)
chr4 (368-461)||(31495367-31495461)
chr4 (400-461)||(28684894-28684955)
chr4 (383-452)||(37755026-37755095)
chr4 (400-461)||(51904491-51904551)
chr4 (377-461)||(52065622-52065706)
chr4 (413-453)||(39662348-39662388)
chr4 (516-560)||(40632342-40632386)
chr4 (148-188)||(44569890-44569930)
chr4 (274-310)||(55085394-55085430)
[»] chr3 (99 HSPs)
chr3 (374-511)||(35138762-35138899)
chr3 (270-501)||(46860459-46860694)
chr3 (383-507)||(20937635-20937759)
chr3 (368-511)||(51398789-51398931)
chr3 (361-511)||(7762240-7762389)
chr3 (377-511)||(26323133-26323267)
chr3 (361-516)||(40735353-40735507)
chr3 (361-472)||(34491226-34491336)
chr3 (361-511)||(53921547-53921696)
chr3 (388-511)||(8166527-8166651)
chr3 (361-511)||(5236500-5236649)
chr3 (361-511)||(22835046-22835195)
chr3 (361-511)||(30236101-30236249)
chr3 (361-511)||(40734473-40734622)
chr3 (368-508)||(1313855-1313996)
chr3 (368-511)||(7764442-7764581)
chr3 (368-511)||(39153412-39153554)
chr3 (361-511)||(760822-760971)
chr3 (373-495)||(4055819-4055941)
chr3 (361-472)||(4569966-4570076)
chr3 (383-510)||(5373207-5373336)
chr3 (361-511)||(31314420-31314569)
chr3 (368-509)||(32891080-32891221)
chr3 (361-511)||(44331520-44331669)
chr3 (361-511)||(44700522-44700671)
chr3 (361-511)||(45095139-45095287)
chr3 (530-640)||(34795685-34795795)
chr3 (414-511)||(3148087-3148184)
chr3 (270-472)||(43401745-43401956)
chr3 (528-632)||(20937481-20937585)
chr3 (361-511)||(29196430-29196580)
chr3 (383-511)||(39127522-39127650)
chr3 (361-461)||(46173382-46173481)
chr3 (361-461)||(54593729-54593828)
chr3 (361-472)||(19683933-19684043)
chr3 (368-511)||(5258195-5258338)
chr3 (361-471)||(9581297-9581406)
chr3 (377-466)||(25491027-25491116)
chr3 (361-453)||(33191865-33191955)
chr3 (270-461)||(36018877-36019068)
chr3 (368-472)||(49199520-49199624)
chr3 (365-481)||(54739001-54739117)
chr3 (276-461)||(6095554-6095742)
chr3 (361-461)||(29810893-29810992)
chr3 (361-511)||(16499005-16499153)
chr3 (361-472)||(29682373-29682483)
chr3 (373-511)||(37408433-37408570)
chr3 (368-511)||(5260374-5260517)
chr3 (368-511)||(9666517-9666660)
chr3 (361-474)||(29813075-29813187)
chr3 (516-612)||(34491057-34491154)
chr3 (368-472)||(43403795-43403899)
chr3 (389-511)||(5433947-5434071)
chr3 (377-461)||(24635282-24635366)
chr3 (373-473)||(32744492-32744590)
chr3 (270-472)||(41819470-41819677)
chr3 (368-511)||(23200189-23200330)
chr3 (384-505)||(1683457-1683577)
chr3 (516-640)||(6095826-6095952)
chr3 (516-612)||(49199697-49199795)
chr3 (527-608)||(1683336-1683417)
chr3 (516-612)||(30235969-30236066)
chr3 (384-452)||(31340268-31340335)
chr3 (516-634)||(36018672-36018792)
chr3 (516-644)||(46860282-46860413)
chr3 (361-480)||(47304256-47304375)
chr3 (368-511)||(23197990-23198131)
chr3 (519-594)||(26323306-26323381)
chr3 (383-505)||(2020129-2020242)
chr3 (368-511)||(9636177-9636320)
chr3 (516-640)||(40913154-40913280)
chr3 (270-425)||(55301920-55302079)
chr3 (516-640)||(47304067-47304192)
chr3 (397-461)||(50432733-50432797)
chr3 (378-437)||(40519258-40519316)
chr3 (393-511)||(40612582-40612701)
chr3 (393-511)||(40612786-40612905)
chr3 (377-448)||(41510300-41510371)
chr3 (516-640)||(4569766-4569892)
chr3 (519-640)||(5434108-5434230)
chr3 (361-427)||(40913352-40913417)
chr3 (373-464)||(54744305-54744396)
chr3 (219-303)||(20937844-20937926)
chr3 (363-495)||(4075516-4075651)
chr3 (373-461)||(23391965-23392052)
chr3 (557-632)||(35138975-35139050)
chr3 (530-585)||(39127418-39127473)
chr3 (368-461)||(801115-801209)
chr3 (394-511)||(23410405-23410522)
chr3 (397-505)||(37761548-37761658)
chr3 (368-461)||(7780055-7780147)
chr3 (516-612)||(54593549-54593645)
chr3 (516-612)||(41819751-41819846)
chr3 (530-612)||(55302206-55302289)
chr3 (380-461)||(42960723-42960803)
chr3 (219-303)||(5270559-5270641)
chr3 (596-633)||(26323821-26323858)
chr3 (279-353)||(26323027-26323105)
chr3 (397-441)||(28253346-28253390)
[»] chr2 (64 HSPs)
chr2 (271-511)||(33648145-33648391)
chr2 (270-508)||(30217993-30218235)
chr2 (361-511)||(17057413-17057562)
chr2 (361-511)||(17085396-17085545)
chr2 (377-461)||(42261545-42261629)
chr2 (361-511)||(1631776-1631924)
chr2 (361-511)||(2334462-2334611)
chr2 (361-456)||(24398087-24398182)
chr2 (361-511)||(36318053-36318202)
chr2 (361-511)||(36773537-36773686)
chr2 (361-513)||(33162494-33162645)
chr2 (377-505)||(41454215-41454343)
chr2 (361-511)||(723788-723937)
chr2 (361-511)||(5723300-5723448)
chr2 (270-461)||(35446833-35447027)
chr2 (368-511)||(4503184-4503326)
chr2 (383-511)||(7597076-7597205)
chr2 (368-511)||(42362327-42362469)
chr2 (361-511)||(36988120-36988269)
chr2 (361-511)||(38312215-38312364)
chr2 (368-511)||(45099729-45099871)
chr2 (361-511)||(29867844-29867993)
chr2 (361-511)||(34139814-34139964)
chr2 (361-472)||(45726943-45727053)
chr2 (362-511)||(11690476-11690624)
chr2 (361-508)||(42019914-42020063)
chr2 (373-511)||(17490204-17490335)
chr2 (361-461)||(6595050-6595149)
chr2 (368-440)||(7815324-7815395)
chr2 (377-488)||(34811281-34811393)
chr2 (383-511)||(36205731-36205857)
chr2 (388-511)||(41446113-41446237)
chr2 (361-511)||(14633869-14634019)
chr2 (516-640)||(1631959-1632085)
chr2 (368-466)||(3897010-3897108)
chr2 (363-480)||(26353189-26353306)
chr2 (516-640)||(45726744-45726870)
chr2 (553-634)||(42261875-42261956)
chr2 (364-511)||(12123631-12123777)
chr2 (362-472)||(11151636-11151745)
chr2 (516-640)||(42288337-42288463)
chr2 (368-461)||(4484381-4484474)
chr2 (361-511)||(13121744-13121891)
chr2 (368-508)||(30833323-30833463)
chr2 (361-461)||(32289588-32289688)
chr2 (361-472)||(42288154-42288264)
chr2 (381-511)||(24885636-24885765)
chr2 (516-640)||(35447111-35447237)
chr2 (373-438)||(7451166-7451230)
chr2 (377-437)||(4561137-4561197)
chr2 (384-511)||(11067280-11067406)
chr2 (422-511)||(17450566-17450655)
chr2 (373-441)||(11049598-11049666)
chr2 (408-500)||(36271651-36271744)
chr2 (527-612)||(43730992-43731076)
chr2 (412-472)||(14202499-14202559)
chr2 (516-611)||(17450436-17450531)
chr2 (552-612)||(24397902-24397962)
chr2 (421-461)||(35214268-35214308)
chr2 (374-425)||(19401318-19401369)
chr2 (398-476)||(2869639-2869717)
chr2 (522-640)||(30218269-30218386)
chr2 (402-460)||(36283002-36283060)
chr2 (270-310)||(17450756-17450796)
[»] chr6 (51 HSPs)
chr6 (275-461)||(5043652-5043842)
chr6 (361-508)||(25073546-25073693)
chr6 (274-472)||(21588945-21589146)
chr6 (276-474)||(22424780-22424983)
chr6 (361-472)||(2972983-2973093)
chr6 (361-511)||(9183075-9183224)
chr6 (361-511)||(26954330-26954478)
chr6 (276-441)||(26800632-26800801)
chr6 (361-472)||(17758037-17758147)
chr6 (361-472)||(21593678-21593788)
chr6 (361-511)||(26830167-26830316)
chr6 (361-511)||(28137452-28137601)
chr6 (270-501)||(17762975-17763211)
chr6 (361-511)||(5406244-5406392)
chr6 (361-511)||(5410569-5410717)
chr6 (361-511)||(31404719-31404867)
chr6 (361-511)||(5413438-5413586)
chr6 (383-508)||(186691-186817)
chr6 (361-511)||(4045398-4045548)
chr6 (361-452)||(603132-603222)
chr6 (516-613)||(603307-603405)
chr6 (368-511)||(30834587-30834730)
chr6 (361-461)||(3808752-3808852)
chr6 (368-511)||(2171583-2171724)
chr6 (516-612)||(26830351-26830448)
chr6 (361-445)||(2908499-2908583)
chr6 (361-461)||(33160396-33160495)
chr6 (516-640)||(2973166-2973292)
chr6 (516-640)||(5043442-5043568)
chr6 (388-482)||(5740068-5740162)
chr6 (368-511)||(16452380-16452523)
chr6 (368-511)||(3038954-3039096)
chr6 (516-608)||(21593514-21593605)
chr6 (390-461)||(12221176-12221247)
chr6 (361-511)||(33211229-33211378)
chr6 (516-640)||(17762804-17762930)
chr6 (405-466)||(27106178-27106239)
chr6 (405-466)||(27147984-27148045)
chr6 (516-640)||(3808936-3809061)
chr6 (368-428)||(412158-412219)
chr6 (527-582)||(22425065-22425119)
chr6 (514-612)||(5741016-5741114)
chr6 (516-614)||(11660450-11660546)
chr6 (409-461)||(14563756-14563808)
chr6 (414-480)||(16569038-16569106)
chr6 (564-644)||(25072996-25073076)
chr6 (361-412)||(5409113-5409163)
chr6 (368-461)||(3072810-3072904)
chr6 (405-474)||(6097528-6097596)
chr6 (308-345)||(12221094-12221131)
chr6 (398-434)||(26310436-26310472)
[»] chr8 (73 HSPs)
chr8 (274-511)||(42434944-42435183)
chr8 (219-511)||(3772167-3772460)
chr8 (270-472)||(4283538-4283743)
chr8 (365-511)||(1292511-1292656)
chr8 (532-639)||(33655548-33655655)
chr8 (514-640)||(40585541-40585666)
chr8 (361-513)||(33352123-33352274)
chr8 (361-508)||(32902217-32902364)
chr8 (361-513)||(30291579-30291731)
chr8 (361-511)||(4162475-4162620)
chr8 (361-480)||(18655405-18655524)
chr8 (361-507)||(7597592-7597739)
chr8 (373-511)||(27811253-27811390)
chr8 (361-472)||(30143354-30143464)
chr8 (361-511)||(43036398-43036547)
chr8 (361-511)||(42498168-42498318)
chr8 (368-511)||(4731633-4731775)
chr8 (373-508)||(11712056-11712192)
chr8 (361-472)||(40328793-40328904)
chr8 (361-511)||(5689246-5689395)
chr8 (361-511)||(15212761-15212910)
chr8 (361-511)||(18141796-18141944)
chr8 (361-472)||(19491743-19491853)
chr8 (361-511)||(34256551-34256699)
chr8 (270-511)||(11383962-11384204)
chr8 (368-511)||(31218231-31218374)
chr8 (373-472)||(3303726-3303824)
chr8 (361-472)||(40221759-40221869)
chr8 (361-511)||(40321055-40321204)
chr8 (373-472)||(44353807-44353905)
chr8 (361-511)||(34254375-34254523)
chr8 (361-481)||(1822296-1822417)
chr8 (361-481)||(1856741-1856862)
chr8 (384-508)||(33655370-33655494)
chr8 (361-461)||(12702678-12702777)
chr8 (368-511)||(1746270-1746412)
chr8 (361-472)||(6598986-6599096)
chr8 (361-472)||(6674439-6674549)
chr8 (361-472)||(10930243-10930353)
chr8 (361-511)||(41366658-41366807)
chr8 (368-511)||(17982627-17982770)
chr8 (388-508)||(41266946-41267067)
chr8 (516-612)||(11383830-11383927)
chr8 (368-472)||(9765759-9765862)
chr8 (383-505)||(3231861-3231984)
chr8 (376-455)||(10240185-10240264)
chr8 (409-511)||(10929774-10929876)
chr8 (377-511)||(18106139-18106271)
chr8 (373-461)||(1345427-1345514)
chr8 (368-511)||(44303828-44303972)
chr8 (368-511)||(19945410-19945554)
chr8 (394-461)||(30909393-30909459)
chr8 (397-511)||(41364926-41365040)
chr8 (516-640)||(40221560-40221686)
chr8 (516-640)||(42435218-42435344)
chr8 (516-612)||(4283368-4283465)
chr8 (393-505)||(11137007-11137118)
chr8 (361-437)||(8153807-8153882)
chr8 (368-439)||(10015128-10015197)
chr8 (361-456)||(29796364-29796460)
chr8 (377-511)||(8965751-8965884)
chr8 (377-511)||(7444878-7445011)
chr8 (516-609)||(44353639-44353733)
chr8 (516-612)||(40328623-40328720)
chr8 (378-508)||(40585691-40585822)
chr8 (218-303)||(11137213-11137296)
chr8 (219-351)||(9633513-9633640)
chr8 (270-336)||(2999751-2999820)
chr8 (539-617)||(10101402-10101480)
chr8 (421-509)||(38863847-38863936)
chr8 (361-426)||(3073917-3073981)
chr8 (516-611)||(18655246-18655341)
chr8 (369-428)||(40873712-40873769)
[»] chr5 (73 HSPs)
chr5 (219-508)||(316740-317032)
chr5 (361-508)||(10054860-10055006)
chr5 (377-508)||(35616147-35616278)
chr5 (361-511)||(39468593-39468742)
chr5 (361-511)||(13239726-13239875)
chr5 (270-472)||(40147275-40147480)
chr5 (361-504)||(3325895-3326038)
chr5 (270-508)||(30802807-30803044)
chr5 (368-511)||(13695741-13695884)
chr5 (368-507)||(16452059-16452197)
chr5 (274-501)||(27637565-27637796)
chr5 (361-511)||(13488178-13488327)
chr5 (373-511)||(33831655-33831792)
chr5 (361-511)||(42309979-42310128)
chr5 (514-644)||(316577-316705)
chr5 (274-472)||(5058061-5058260)
chr5 (377-511)||(10700708-10700841)
chr5 (361-511)||(25412736-25412884)
chr5 (223-511)||(33905927-33906220)
chr5 (361-472)||(213479-213589)
chr5 (361-511)||(8565990-8566139)
chr5 (361-472)||(28278330-28278440)
chr5 (361-511)||(42426279-42426428)
chr5 (361-511)||(42428474-42428623)
chr5 (516-612)||(5057891-5057988)
chr5 (373-511)||(533744-533881)
chr5 (361-511)||(538000-538149)
chr5 (368-511)||(36074094-36074238)
chr5 (361-472)||(38747019-38747129)
chr5 (361-461)||(37439166-37439265)
chr5 (368-511)||(13343035-13343177)
chr5 (516-634)||(14689639-14689756)
chr5 (368-511)||(30182563-30182705)
chr5 (516-640)||(40147076-40147202)
chr5 (383-460)||(32579250-32579327)
chr5 (383-460)||(32609561-32609638)
chr5 (361-441)||(9049386-9049465)
chr5 (368-480)||(16409480-16409592)
chr5 (270-427)||(30793195-30793352)
chr5 (545-633)||(33906286-33906374)
chr5 (516-611)||(16641168-16641263)
chr5 (361-511)||(28750699-28750848)
chr5 (368-511)||(31182948-31183088)
chr5 (361-511)||(32636799-32636948)
chr5 (394-511)||(5887492-5887609)
chr5 (368-461)||(22097889-22097980)
chr5 (516-640)||(27015347-27015473)
chr5 (368-461)||(26177906-26177999)
chr5 (377-466)||(32583342-32583431)
chr5 (368-480)||(18441699-18441811)
chr5 (361-511)||(3075702-3075851)
chr5 (370-437)||(8445764-8445831)
chr5 (393-476)||(14689502-14689585)
chr5 (518-612)||(4160477-4160571)
chr5 (361-438)||(30682966-30683044)
chr5 (516-612)||(38746849-38746946)
chr5 (384-437)||(42926916-42926968)
chr5 (368-428)||(9789275-9789335)
chr5 (394-454)||(16641013-16641073)
chr5 (390-461)||(8038221-8038292)
chr5 (270-340)||(27015669-27015741)
chr5 (419-508)||(19806361-19806449)
chr5 (516-640)||(213284-213406)
chr5 (416-467)||(5007569-5007621)
chr5 (388-452)||(32576368-32576431)
chr5 (391-434)||(18470923-18470966)
chr5 (427-461)||(4160656-4160690)
chr5 (219-303)||(10700548-10700630)
chr5 (270-353)||(4160733-4160819)
chr5 (150-215)||(4160886-4160953)
chr5 (516-580)||(8019464-8019526)
chr5 (405-461)||(26170797-26170853)
chr5 (153-214)||(33905832-33905895)
[»] chr1 (103 HSPs)
chr1 (271-459)||(6808479-6808672)
chr1 (383-633)||(12318588-12318826)
chr1 (307-511)||(47255328-47255532)
chr1 (361-511)||(10925198-10925350)
chr1 (270-472)||(13547038-13547243)
chr1 (377-495)||(16914234-16914353)
chr1 (361-511)||(3156840-3156989)
chr1 (361-495)||(22079307-22079441)
chr1 (361-511)||(46064893-46065042)
chr1 (361-511)||(49918325-49918474)
chr1 (274-472)||(37168311-37168513)
chr1 (270-472)||(13548949-13549154)
chr1 (361-508)||(9109463-9109610)
chr1 (368-511)||(37282742-37282884)
chr1 (361-511)||(8550831-8550980)
chr1 (361-511)||(31659213-31659362)
chr1 (361-510)||(4552681-4552829)
chr1 (373-511)||(13138032-13138167)
chr1 (516-640)||(41135636-41135760)
chr1 (377-508)||(1050503-1050634)
chr1 (361-511)||(28220270-28220419)
chr1 (373-511)||(50169266-50169403)
chr1 (377-511)||(25652061-25652195)
chr1 (270-511)||(31925655-31925899)
chr1 (271-461)||(47115196-47115391)
chr1 (361-474)||(19754507-19754619)
chr1 (361-511)||(37503601-37503747)
chr1 (368-511)||(834218-834360)
chr1 (361-511)||(45644398-45644548)
chr1 (361-511)||(193587-193735)
chr1 (219-515)||(2926484-2926779)
chr1 (361-511)||(3189305-3189454)
chr1 (361-511)||(3198122-3198271)
chr1 (361-511)||(3206961-3207110)
chr1 (377-511)||(15820282-15820415)
chr1 (361-511)||(28265598-28265747)
chr1 (361-472)||(41360928-41361038)
chr1 (361-511)||(44455135-44455284)
chr1 (361-511)||(19752661-19752810)
chr1 (368-511)||(196959-197101)
chr1 (361-461)||(11348723-11348822)
chr1 (373-461)||(42298031-42298118)
chr1 (368-455)||(928027-928113)
chr1 (361-511)||(1833497-1833646)
chr1 (378-461)||(4535541-4535624)
chr1 (361-511)||(28223465-28223614)
chr1 (368-474)||(23555316-23555421)
chr1 (274-471)||(7482183-7482384)
chr1 (361-511)||(20762646-20762796)
chr1 (270-472)||(29136261-29136467)
chr1 (516-640)||(19754306-19754435)
chr1 (516-612)||(34602567-34602663)
chr1 (516-612)||(34603420-34603516)
chr1 (361-511)||(13659380-13659529)
chr1 (361-511)||(16455597-16455745)
chr1 (361-511)||(50167219-50167368)
chr1 (516-640)||(47114986-47115112)
chr1 (361-454)||(3460728-3460821)
chr1 (516-612)||(11348542-11348639)
chr1 (516-612)||(31925933-31926030)
chr1 (368-461)||(32471486-32471578)
chr1 (368-472)||(37033123-37033227)
chr1 (373-449)||(2263030-2263106)
chr1 (368-495)||(13938128-13938255)
chr1 (361-511)||(37559912-37560062)
chr1 (516-644)||(28242199-28242329)
chr1 (276-353)||(28242438-28242518)
chr1 (373-501)||(34603561-34603689)
chr1 (516-612)||(193455-193552)
chr1 (516-640)||(7482459-7482583)
chr1 (368-461)||(13316403-13316495)
chr1 (516-612)||(29136091-29136188)
chr1 (387-508)||(41135798-41135919)
chr1 (368-511)||(3847172-3847314)
chr1 (282-436)||(5459956-5460111)
chr1 (361-474)||(40122240-40122354)
chr1 (373-511)||(44650218-44650356)
chr1 (516-640)||(37168112-37168238)
chr1 (516-640)||(37879138-37879264)
chr1 (516-612)||(13547316-13547413)
chr1 (516-612)||(13549227-13549324)
chr1 (516-612)||(19752529-19752626)
chr1 (516-612)||(37033300-37033397)
chr1 (390-461)||(1485843-1485914)
chr1 (368-511)||(6398621-6398763)
chr1 (389-508)||(33775887-33776006)
chr1 (516-634)||(22079144-22079261)
chr1 (516-640)||(42298202-42298328)
chr1 (373-461)||(30476502-30476589)
chr1 (372-495)||(30670084-30670207)
chr1 (405-461)||(36683715-36683771)
chr1 (414-461)||(37879007-37879054)
chr1 (516-582)||(47255567-47255634)
chr1 (387-446)||(38746786-38746847)
chr1 (276-340)||(37876721-37876788)
chr1 (540-639)||(9109653-9109753)
chr1 (368-431)||(51765450-51765514)
chr1 (410-452)||(43342389-43342431)
chr1 (409-502)||(41053280-41053378)
chr1 (399-455)||(8871129-8871185)
chr1 (271-340)||(19754641-19754712)
chr1 (387-447)||(27558335-27558394)
chr1 (274-310)||(34603742-34603778)
[»] chr7 (89 HSPs)
chr7 (271-454)||(22328339-22328527)
chr7 (270-472)||(29608751-29608956)
chr7 (361-511)||(47673987-47674136)
chr7 (270-472)||(8359264-8359471)
chr7 (274-472)||(48599287-48599488)
chr7 (361-511)||(1113632-1113781)
chr7 (361-472)||(2361016-2361126)
chr7 (361-511)||(30024776-30024925)
chr7 (361-511)||(48491554-48491703)
chr7 (270-461)||(4508655-4508849)
chr7 (361-511)||(23555014-23555164)
chr7 (361-511)||(26417291-26417440)
chr7 (373-511)||(27347792-27347929)
chr7 (361-511)||(31733013-31733162)
chr7 (274-441)||(32358007-32358177)
chr7 (361-461)||(23565105-23565205)
chr7 (368-508)||(5116582-5116722)
chr7 (361-472)||(6431985-6432095)
chr7 (361-511)||(18126619-18126768)
chr7 (361-472)||(22269987-22270097)
chr7 (377-461)||(43363531-43363617)
chr7 (361-511)||(43864219-43864368)
chr7 (361-455)||(4253572-4253666)
chr7 (274-472)||(3259009-3259210)
chr7 (361-508)||(4586139-4586285)
chr7 (368-511)||(35853889-35854031)
chr7 (361-511)||(36146452-36146601)
chr7 (361-453)||(36574559-36574651)
chr7 (388-508)||(1360221-1360343)
chr7 (361-460)||(2759241-2759339)
chr7 (361-511)||(8153317-8153466)
chr7 (361-511)||(14069877-14070026)
chr7 (361-511)||(14379905-14380054)
chr7 (361-507)||(19502156-19502302)
chr7 (361-511)||(41649055-41649203)
chr7 (361-511)||(47676180-47676329)
chr7 (326-508)||(3904624-3904808)
chr7 (361-511)||(29991029-29991177)
chr7 (361-474)||(2390294-2390406)
chr7 (383-511)||(31518770-31518897)
chr7 (274-472)||(34310668-34310870)
chr7 (537-617)||(23794074-23794154)
chr7 (368-511)||(31105444-31105586)
chr7 (361-472)||(496027-496137)
chr7 (276-472)||(4510503-4510702)
chr7 (276-472)||(4512345-4512544)
chr7 (361-472)||(25615867-25615977)
chr7 (373-510)||(38671278-38671414)
chr7 (516-612)||(2390126-2390223)
chr7 (361-446)||(6359996-6360080)
chr7 (516-612)||(34310943-34311040)
chr7 (368-511)||(25767011-25767151)
chr7 (361-511)||(41317478-41317627)
chr7 (361-472)||(48489445-48489555)
chr7 (516-640)||(2361199-2361324)
chr7 (373-511)||(4178749-4178885)
chr7 (516-640)||(4512617-4512743)
chr7 (516-612)||(6360139-6360236)
chr7 (308-461)||(31518928-31519081)
chr7 (516-612)||(48599561-48599658)
chr7 (361-509)||(26639297-26639449)
chr7 (368-480)||(39731374-39731486)
chr7 (387-434)||(27073868-27073915)
chr7 (387-434)||(27204398-27204445)
chr7 (516-640)||(29608551-29608677)
chr7 (516-612)||(6431815-6431912)
chr7 (361-461)||(18396342-18396442)
chr7 (400-511)||(12097941-12098052)
chr7 (506-632)||(1360371-1360497)
chr7 (365-456)||(23344005-23344095)
chr7 (527-644)||(22328637-22328755)
chr7 (557-633)||(43363683-43363759)
chr7 (377-508)||(40808567-40808697)
chr7 (516-606)||(3258846-3258935)
chr7 (516-640)||(4510775-4510901)
chr7 (407-511)||(24525985-24526090)
chr7 (368-511)||(48408777-48408921)
chr7 (405-511)||(4538627-4538733)
chr7 (222-303)||(1360075-1360154)
chr7 (394-451)||(2995330-2995388)
chr7 (516-640)||(4508933-4509059)
chr7 (422-511)||(5514113-5514202)
chr7 (368-461)||(43504205-43504299)
chr7 (383-428)||(20128279-20128323)
chr7 (516-600)||(22269829-22269914)
chr7 (538-591)||(22552683-22552736)
chr7 (361-410)||(24525546-24525594)
chr7 (390-438)||(23793904-23793952)
chr7 (150-190)||(26639641-26639681)
[»] scaffold0466 (2 HSPs)
scaffold0466 (270-511)||(7303-7546)
scaffold0466 (516-612)||(7172-7269)
[»] scaffold0002 (3 HSPs)
scaffold0002 (377-461)||(490380-490464)
scaffold0002 (368-511)||(434507-434650)
scaffold0002 (553-634)||(490710-490791)
[»] scaffold0219 (1 HSPs)
scaffold0219 (361-508)||(27486-27634)
[»] scaffold0176 (1 HSPs)
scaffold0176 (274-461)||(17956-18146)
[»] scaffold0286 (2 HSPs)
scaffold0286 (368-511)||(11532-11674)
scaffold0286 (516-640)||(11373-11499)
[»] scaffold0016 (1 HSPs)
scaffold0016 (361-511)||(114577-114726)
[»] scaffold0053 (1 HSPs)
scaffold0053 (368-453)||(25086-25171)
[»] scaffold1519 (1 HSPs)
scaffold1519 (368-511)||(891-1032)
[»] scaffold0197 (2 HSPs)
scaffold0197 (553-633)||(1671-1751)
scaffold0197 (384-508)||(1461-1585)
[»] scaffold0006 (1 HSPs)
scaffold0006 (361-511)||(149141-149290)
[»] scaffold0066 (1 HSPs)
scaffold0066 (361-461)||(20459-20558)
[»] scaffold0236 (1 HSPs)
scaffold0236 (219-429)||(10546-10758)
[»] scaffold0014 (2 HSPs)
scaffold0014 (385-472)||(80351-80437)
scaffold0014 (516-640)||(80510-80636)
[»] scaffold0491 (2 HSPs)
scaffold0491 (368-508)||(11212-11352)
scaffold0491 (368-461)||(8786-8879)


Alignment Details
Target: chr4 (Bit Score: 347; Significance: 0; HSPs: 115)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 17 - 511
Target Start/End: Original strand, 22882453 - 22882944
Alignment:
Q  17 agtatggaagttggtaacagtaggggtgtctataacttaatgcacagtaaagccatgcataaagggaagnnnnnnnnn-cctattactgtgttagcttaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||          ||||||||||| |||||||||    
T  22882453 agtatggaagttggtaacagtaggggtgtctataacttaatgcacagtaaagccgtgtataaagggaagaaaaaaaaaacctattactgtattagcttaa 22882552  T
Q  116 caacatagtactcgattgtcttgtgaatcaggtaggtaacttcaaatctcacatcaataaaattgagatttgtgattcaagtatctgacaaccaataacc 215  Q
    |||||||||||||||||||||||||||||     |||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||| ||||||||    
T  22882553 caacatagtactcgattgtcttgtgaatc----gggtaacttcaaatctcgcatcaataaaattgagatttgtgatacaagtatctgccaatcaataacc 22882648  T
Q  216 tctatctagatataatctaaaaatcaagtttaaagtaaaaccacaatagaatatcaaagaataaacaagataaagagagtatagaaaatataacaccaag 315  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  22882649 tctatctagatataatctaaaaaccaagtttaaagtaaaaccacaatggaatatcaaagaataaataagataaagagagtatagaaaaaataacaccaag 22882748  T
Q  316 aaatgttaatccagttcggtccaacaatgatctactctnnnnnnnattgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagt 415  Q
    ||||||| |||||||||||||||||||||| ||||||        ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  22882749 aaatgtttatccagttcggtccaacaatgacctactccgggggagattgatttctctaatccactaccaatgagttctttacgaagagatacaaaagggt 22882848  T
Q  416 tacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22882849 tacaagaaattagcttcaacaaactctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaaggcactcaatgattttca 22882944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 17 - 511
Target Start/End: Original strand, 22934117 - 22934608
Alignment:
Q  17 agtatggaagttggtaacagtaggggtgtctataacttaatgcacagtaaagccatgcataaagggaagnnnnnnnnn-cctattactgtgttagcttaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||          ||||||||||| |||||||||    
T  22934117 agtatggaagttggtaacagtaggggtgtctataacttaatgcacagtaaagccgtgtataaagggaagaaaaaaaaaacctattactgtattagcttaa 22934216  T
Q  116 caacatagtactcgattgtcttgtgaatcaggtaggtaacttcaaatctcacatcaataaaattgagatttgtgattcaagtatctgacaaccaataacc 215  Q
    |||||||||||||||||||||||||||||     |||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||| ||||||||    
T  22934217 caacatagtactcgattgtcttgtgaatc----gggtaacttcaaatctcgcatcaataaaattgagatttgtgatacaagtatctgccaatcaataacc 22934312  T
Q  216 tctatctagatataatctaaaaatcaagtttaaagtaaaaccacaatagaatatcaaagaataaacaagataaagagagtatagaaaatataacaccaag 315  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  22934313 tctatctagatataatctaaaaaccaagtttaaagtaaaaccacaatggaatatcaaagaataaataagataaagagagtatagaaaaaataacaccaag 22934412  T
Q  316 aaatgttaatccagttcggtccaacaatgatctactctnnnnnnnattgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagt 415  Q
    ||||||| |||||||||||||||||||||| ||||||        ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  22934413 aaatgtttatccagttcggtccaacaatgacctactccgggggagattgatttctctaatccactaccaatgagttctttacgaagagatacaaaagggt 22934512  T
Q  416 tacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22934513 tacaagaaattagcttcaacaaactctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaaggcactcaatgattttca 22934608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 510 - 644
Target Start/End: Original strand, 22882974 - 22883109
Alignment:
Q  510 caattttagaatctaatcccc-aaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctca 608  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22882974 caattctagaatctaaccccccaaaagagaaccaaccattatcctttgattttctaaggatcttctcttttggtctcctaagactcgcccaaattgctca 22883073  T
Q  609 caaagactctcatttgatgtgtttccaaaccctatg 644  Q
    |||||||||||||||||||||||||| |||||||||    
T  22883074 caaagactctcatttgatgtgtttcctaaccctatg 22883109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 510 - 644
Target Start/End: Original strand, 22934638 - 22934773
Alignment:
Q  510 caattttagaatctaatcccc-aaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctca 608  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22934638 caattctagaatctaaccccccaaaagagaaccaaccattatcctttgattttctaaggatcttctcttttggtctcctaagactcgcccaaattgctca 22934737  T
Q  609 caaagactctcatttgatgtgtttccaaaccctatg 644  Q
    |||||||||||||||||||||||||| |||||||||    
T  22934738 caaagactctcatttgatgtgtttcctaaccctatg 22934773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 240 - 511
Target Start/End: Complemental strand, 33090128 - 33089853
Alignment:
Q  240 caagtttaaagtaaaaccacaatagaatatcaaagaataaacaagataaagagagtatagaaaatataacacc----aagaaatgttaatccagttcggt 335  Q
    ||||| ||||| ||||||||||| |||   |||| |||||||||||||||||||| | |||||| | |||| |    ||||| |||| ||| ||| ||||    
T  33090128 caagtgtaaagcaaaaccacaatcgaac--caaaaaataaacaagataaagagagcagagaaaagagaacaacttcaaagaattgtttatctagtccggt 33090031  T
Q  336 ccaacaatgatctactctnnnnnnna--ttgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttca 433  Q
    |||||||| | |||||||       |  ||||| |||||||||||||| |||||||||||||||| ||||||||||||  |||| || ||||||||||||    
T  33090030 ccaacaataacctactctagaggagagattgatctctctaatccactatcaatgagttctttacagagagatacaaaatggttataataaattagcttca 33089931  T
Q  434 acaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    ||||||||||||||||||||| |||||| ||| ||| | |||||||||| ||||||||||||||||||||||||||||    
T  33089930 acaagctctccaagaacaaacataatttctattcatctctcaatctcttcccatgaacaagacactcaatgattttca 33089853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 270 - 472
Target Start/End: Complemental strand, 12073612 - 12073406
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttg 364  Q
    ||||||||||||||||||||||||||| |||||| ||||||   |||||||||||| | | |||||||||||||||||| |||||||       |  |||    
T  12073612 caaagaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacctagttcggtccaacaatgacctactctggaagagagattg 12073513  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttta 464  Q
    || |||| ||||||||| |||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||||||||||||| ||    
T  12073512 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaataaattagcttcaacaagctcacaaagaacaaacctaatttcta 12073414  T
Q  465 tccatttt 472  Q
     |||||||    
T  12073413 cccatttt 12073406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 270 - 480
Target Start/End: Complemental strand, 379600 - 379385
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttg 364  Q
    ||||| ||||||||||||||||||||| |||||| ||||||   |||||||||||| |||||||||||||||||||||| |||||||       |  |||    
T  379600 caaaggataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcatccagttcggtccaacaatgacctactctggaggagagattg 379501  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttta 464  Q
    || |||| ||||||||| |||| ||||||| |||||| |||||||| | |||||||||||||||||||||||||||| | ||||||||||||||||| ||    
T  379500 atctctccaatccactatcaattagttctt-acaaagcgatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttcta 379402  T
Q  465 tccatttt-tcaatctc 480  Q
     ||||||| ||||||||    
T  379401 cccattttctcaatctc 379385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 270 - 455
Target Start/End: Original strand, 26699390 - 26699580
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataac---accaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttg 364  Q
    ||||||||||||||||||||||||||| |||||| |||||   || ||||||| || | |||||||||||||||||||| |||||||       |  |||    
T  26699390 caaagaataaacaagataaagagagtaaagaaaagataacggcactaagaaatttttacccagttcggtccaacaatgacctactctgggatagagattg 26699489  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc 455  Q
    || |||| |||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  26699490 atctctccaatccattataaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagaacaaacc 26699580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 361 - 640
Target Start/End: Complemental strand, 26364360 - 26364080
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| |||||||||  ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| || | |||||||| |||||||    
T  26364360 attgatctctccaatccactattaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 26364262  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttcaattttagaatctaatccccaaaagagaaccaaccattatcctttgatt 559  Q
    | || |||||||  |||||||   | |||||||||||||| | || ||  ||| | || ||||||| | ||||||||||||||||| ||| | |||||||    
T  26364261 tctacccattttcccaatctc-accaatgaacaagacactaattgtttcccaactctaaaatctaaccaccaaaagagaaccaacccttagcatttgatt 26364163  T
Q  560 t-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-gactctcatttgatgtgtttccaaaccc 640  Q
    |  |||||||| |||||||||||| ||  ||||||| ||||| ||||||||||| |||||||   | |||||||||| |||||    
T  26364162 tcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtttcccaaccc 26364080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 383 - 511
Target Start/End: Original strand, 44570431 - 44570564
Alignment:
Q  383 caatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctt 482  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||| ||||||| |||||| || |||||||||||||||||    
T  44570431 caatgagttctttacaaagagatacaaaaatgttacaagaaattagtttcaacaagctctccaacaacaaacataatttcta-ccatttttcaatctctt 44570529  T
Q  483 tc------catgaacaagacactcaatgattttca 511  Q
     |      |||||||||||||||||||||||||||    
T  44570530 cccatgaacatgaacaagacactcaatgattttca 44570564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 270 - 457
Target Start/End: Complemental strand, 33990065 - 33989873
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataa---caccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttg 364  Q
    ||||||||||||||||||||||||||| | |||||||||   |||||||||||||| | |||||||  ||||| ||||| |||||||       |  |||    
T  33990065 caaagaataaacaagataaagagagtagaaaaaatataataacaccaagaaatgtttacccagttcaatccaagaatgacctactctggtggagagattg 33989966  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaaccta 457  Q
    || |||| |||||||||  || ||||| ||||||||||||||||||||  ||||||||||||||||||||||| ||||| |||||||||||||    
T  33989965 atctctccaatccactattaacgagttatttacaaagagatacaaaaggattacaagaaattagcttcaacaaactctctaagaacaaaccta 33989873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 383 - 508
Target Start/End: Complemental strand, 32091581 - 32091456
Alignment:
Q  383 caatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctt 482  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| || |  |||  ||||||  |    
T  32091581 caatgtgttctttacaaagagatacaaaagagttacaagaaattagtttcaacaaactctccaagaacaaacctaatttctagcattttcccaatcttct 32091482  T
Q  483 tccatgaacaagacactcaatgattt 508  Q
     |||||||||||| ||||||||||||    
T  32091481 cccatgaacaagagactcaatgattt 32091456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 274 - 501
Target Start/End: Complemental strand, 35662656 - 35662426
Alignment:
Q  274 gaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnnat--tgattt 368  Q
    ||||||||||||||||||||||| |||||| ||||||   |||| ||||||| || ||||||||||||||  ||| |||||||       ||  |||| |    
T  35662656 gaataaacaagataaagagagtaaagaaaagataacaacaccaaaaaatgttcattcagttcggtccaact-tgacctactcttgaggagatattgatct 35662558  T
Q  369 ctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcca 468  Q
    ||| ||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||   |||||||| |||||||| || |||    
T  35662557 ctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaaactcataaagaacaaccctaatttctaccca 35662459  T
Q  469 -tttttcaatctctttccatgaacaagacactca 501  Q
     ||||||||||||   | ||||||||||||||||    
T  35662458 ttttttcaatctc-accaatgaacaagacactca 35662426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 271 - 473
Target Start/End: Complemental strand, 6656174 - 6655969
Alignment:
Q  271 aaagaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttga 365  Q
    |||| ||||||||||||||||||||| |||||| ||||||   |||||||||||| | ||| |||||||||||  ||| |||||||       |  ||||    
T  6656174 aaaggataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccaattcggtccaact-tgacctactctggatgagagattga 6656076  T
Q  366 tttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttat 465  Q
    | |||| ||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| || | |||||||| | |||||| ||     
T  6656075 tctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagttcacaaagaacaaccttaatttctac 6655977  T
Q  466 ccattttt 473  Q
    ||||||||    
T  6655976 ccattttt 6655969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 274 - 472
Target Start/End: Complemental strand, 8665623 - 8665422
Alignment:
Q  274 gaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgattt 368  Q
    ||||||||||||||||||||||| |||||| ||||||   |||||||||||  | | |||| ||||||||  ||| |||||||       |  ||||| |    
T  8665623 gaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgtacacctagtttggtccaact-tgacctactctggaggagagattgatct 8665525  T
Q  369 ctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcca 468  Q
    ||| ||||||||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||| || |||    
T  8665524 ctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctctcaaagaacaaccctaatttctaccca 8665426  T
Q  469 tttt 472  Q
    ||||    
T  8665425 tttt 8665422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 270 - 511
Target Start/End: Complemental strand, 12119764 - 12119513
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatata-------acaccaagaaat-gttaatccagttcggtccaacaatgatctactctnnnnnnn- 360  Q
    |||||| |||||||||||||||||||| |||||| |||       |||||||||||| ||| | | |||||||||||||||||| |||||||            
T  12119764 caaagactaaacaagataaagagagtagagaaaaaatagatgacaacaccaagaaattgttcacctagttcggtccaacaatgacctactcttgggagag 12119665  T
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc-taat 459  Q
    |||||| |||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| || | ||||||||||| ||||    
T  12119664 attgatctctccaatccactataaatgagttctttacaaagagatacaaaagggttacaagaaattagcttcaaaaagttcacaaagaacaaaccataat 12119565  T
Q  460 tttta-tccatttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    || || ||  |||| |||||||   | |||||||||||||||| |||||||||    
T  12119564 ttctactcttttttccaatctc-acctatgaacaagacactcattgattttca 12119513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 276 - 461
Target Start/End: Complemental strand, 46703715 - 46703525
Alignment:
Q  276 ataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgatttct 370  Q
    ||||||||||||||||||||| |||||| ||||||   |||||||||||| | ||| |||||||||||||||| |||||||       |  ||||| |||    
T  46703715 ataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccaattcggtccaacaatgacctactctggaggagagattgatctct 46703616  T
Q  371 ctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    | |||||||||  ||||||||||| |||||||||||||||| | |||||||||||||||||| ||||||||| | |||||||| ||||||||    
T  46703615 ccaatccactataaatgagttctt-acaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaattt 46703525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 527 - 631
Target Start/End: Complemental strand, 3786019 - 3785915
Alignment:
Q  527 ccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgat 626  Q
    ||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||| |||||     
T  3786019 ccccaaaagagaaccaactcttagcctttgatttcctaaggatattctcttttggtctcccaagactcgcacaatttgctcacaaagactctcctttgaa 3785920  T
Q  627 gtgtt 631  Q
    |||||    
T  3785919 gtgtt 3785915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 269 - 461
Target Start/End: Complemental strand, 34113035 - 34112842
Alignment:
Q  269 tcaaagaataaacaagataaagagagtatagaaaatataacaccaagaaat-gttaatccagttcggtccaacaatgatctactctnnnnnnnattgatt 367  Q
    |||||||||||||||||||||| ||||| |||||| | ||||||||  ||| ||| | | | |||||||||||||||| ||||| |       |  |||     
T  34113035 tcaaagaataaacaagataaagtgagtagagaaaagagaacaccaaataattgtttaccaaattcggtccaacaatgacctactataggggagagagatc 34112936  T
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||| | | ||||| ||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  34112935 tctccacttcactatcaatgagttctttacaaagagatgcaaaagggttacatgaaattagcttcaacaagctctcctagaacaaacataattt 34112842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 56178681 - 56178830
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| || | |||||||| |||||||    
T  56178681 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 56178779  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || || ||||  |||||||   | ||||||||||||||||||||||||||    
T  56178780 tctaccctttttcccaatctc-accaatgaacaagacactcaatgattttca 56178830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 361 - 508
Target Start/End: Complemental strand, 6677594 - 6677446
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaag--aacaaacctaa 458  Q
    |||||| |||| |||||| || ||| || ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||  || ||||||||    
T  6677594 attgatctctcaaatccattatcaaagacttctttacaaagatatacaaaagggttacaagaaattagcttcaacaagctctccaagaaaaaaaacctaa 6677495  T
Q  459 tttttatccatttttcaatctctttccatgaacaagacactcaatgattt 508  Q
    ||| || ||||||| |||| |||| ||| |||||||| ||||||| ||||    
T  6677494 tttcta-ccattttccaatttcttcccaagaacaagagactcaattattt 6677446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 47038455 - 47038602
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||| ||| ||||| ||||||||| || ||||||||||||||||||||||||||| | |||||||| |||||||    
T  47038455 attgatctctccaatccactatcaatgagtcctt-acaaacagatacaaatga-ttacaagaaattagcttcaacaagctcacaaagaacaaccctaatt 47038552  T
Q  461 tttatccatttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||| |||||||   | ||||||||||||||||||||||||||    
T  47038553 tctacccattttccaatctc-accaatgaacaagacactcaatgattttca 47038602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 274 - 441
Target Start/End: Original strand, 50673800 - 50673970
Alignment:
Q  274 gaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgattt 368  Q
    ||||||||||||||||||||||| |||||| ||||||   |||||||||||| | | |||||||||||||  ||| |||||||       |  ||||| |    
T  50673800 gaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacctagttcggtccaact-tgacctactctggaggagagattgatct 50673898  T
Q  369 ctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctc 441  Q
    ||| ||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  50673899 ctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctc 50673970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 387 - 513
Target Start/End: Complemental strand, 5350009 - 5349879
Alignment:
Q  387 gagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttc-- 484  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||| ||||| || | ||||||||||||||||| || |||||||| ||||||||||      
T  5350009 gagttctttacaaagagatacaaacgagctacaaggaattagcttcgacaagttcacaaagaacaaacctaatttctacccattttttaatctctttccg 5349910  T
Q  485 --catgaacaagacactcaatgattttcaat 513  Q
      | |||||||||||||||| ||||||||||    
T  5349909 tacgtgaacaagacactcaaagattttcaat 5349879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 363 - 511
Target Start/End: Original strand, 54199952 - 54200099
Alignment:
Q  363 tgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttt 462  Q
    |||| |||||||| ||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| || | |||||||| ||||||||     
T  54199952 tgatctctctaattcactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttc 54200050  T
Q  463 tatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  54200051 tacccattttcccaatctc-accaatgaacaagacactcaatgattttca 54200099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 24969229 - 24969087
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| |||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||| ||||||| || ||    
T  24969229 tctccaatccactatcaattagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaatctaatttctaccc 24969131  T
Q  468 attttt-caatctctttccatgaacaagacactcaatgattttca 511  Q
    |||||| |||||||   | | ||||||||| ||||||||||||||    
T  24969130 atttttccaatctc-accaaagaacaagactctcaatgattttca 24969087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 26175680 - 26175829
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||| |||||||||||| | |||||||| |||||||    
T  26175680 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaccctaatt 26175778  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | |  |||||||  |||||||   | ||||||||||||||||||||||||||    
T  26175779 tctccccattttcccaatctc-accaatgaacaagacactcaatgattttca 26175829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 36994648 - 36994499
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| |||||| |||||||| | |||||||||||||||||||||||||||| | |||||||| | |||||    
T  36994648 attgatctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccttaatt 36994550  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  36994549 tctacccattttcccaatctc-accaatgaacaagacactcaatgattttca 36994499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 275 - 508
Target Start/End: Original strand, 38811143 - 38811379
Alignment:
Q  275 aataaacaagataaagagagtatagaaaatataacacca----agaaatgttaatccagttcggtccaacaatgatctactctnnnnnnnattgatttct 370  Q
    ||||||||| |||||||||||| |||||| | |||| ||    |||| |||| | |||||||||||||||||||| |||||||       |  ||| |||    
T  38811143 aataaacaatataaagagagtagagaaaagagaacaacaccgaagaattgtttacccagttcggtccaacaatgacctactcttggggagagagatctct 38811242  T
Q  371 ctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatt 470  Q
    |   | ||||| ||||||||  |||||||||| ||||||||  || || ||||||||  |||||||| |||||||||||||||| |||||| || |||||    
T  38811243 ccgcttcactatcaatgagtcatttacaaaga-atacaaaatggtcactagaaattaaattcaacaaactctccaagaacaaacttaatttgtacccatt 38811341  T
Q  471 tttcaatctctttccatgaacaagacactcaatgattt 508  Q
    | |||||||||||| |||||||||| ||||||||||||    
T  38811342 tctcaatctctttctatgaacaagagactcaatgattt 38811379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 48893682 - 48893835
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaa----gaacaaacct 456  Q
    |||||| |||| ||||||||| ||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | ||    |||||| |||    
T  48893682 attgatctctccaatccactatcaaagagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaacaatgaacaaccct 48893780  T
Q  457 aatttttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    ||||| || ||||||| ||||||||   | ||||||||||||||||||||||||||    
T  48893781 aatttctacccattttctcaatctc-accaatgaacaagacactcaatgattttca 48893835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 274 - 472
Target Start/End: Complemental strand, 8648354 - 8648153
Alignment:
Q  274 gaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgattt 368  Q
    ||||||||||||||||||||||| |||||| ||||||   |||||||||||| | |||||| ||||||||  ||| |||||||       |  ||||| |    
T  8648354 gaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagtttggtccaact-tgacctactctggaggagagattgatct 8648256  T
Q  369 ctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcca 468  Q
    ||| |||||| || |||||||||||| ||||||||||||||| | |||| ||||||||||||||||||| ||| | | |||||| |||||||| ||||||    
T  8648255 ctccaatccaatatcaatgagttctt-acaaagagatacaaatgggttataagaaattagcttcaacaaactcacaatgaacaaccctaatttctatcca 8648157  T
Q  469 tttt 472  Q
    ||||    
T  8648156 tttt 8648153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 31474268 - 31474125
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaa-acctaatttttatc 466  Q
    |||| |||| |||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||   |||||||| ||||||||| || |    
T  31474268 tctccaatcaactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaaactcaaaaagaacaagacctaatttctacc 31474170  T
Q  467 catttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    |||||| ||||||||   | ||||||||||||||||||||||||||    
T  31474169 cattttctcaatctc-accaatgaacaagacactcaatgattttca 31474125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 361 - 474
Target Start/End: Original strand, 46147435 - 46147547
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | | |||||| |||||||    
T  46147435 attgatgtctccaatccactatcaaagagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaatgaacaaccctaatt 46147533  T
Q  461 tttatccatttttc 474  Q
    | || |||||||||    
T  46147534 tctacccatttttc 46147547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 361 - 461
Target Start/End: Original strand, 27417009 - 27417108
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||    
T  27417009 attgatctctccaatccactatcaatgagtt-tttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatt 27417107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 5429803 - 5429654
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||| ||||||||| | |||||||||||||||||||||||||||| | ||||| || |||||||    
T  5429803 attgatctctccaatccactatcaatgagttctt-acaaatagatacaaatgggttacaagaaattagcttcaacaagctcacgaagaataaccctaatt 5429705  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | ||  ||||||  |||||||   | ||||||||||||||||||||||||||    
T  5429704 tctactcattttcccaatctc-accaatgaacaagacactcaatgattttca 5429654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 5871944 - 5871795
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||||||||||||| ||| ||||||||  ||||| |||| ||| | ||||||||||||| |||| ||||||||| | ||||||||||||||||    
T  5871944 attgatctctctaatccactatcaaagagttcttg-caaagtgataaaaatgggttacaagaaatttgcttaaacaagctcacaaagaacaaacctaatt 5871846  T
Q  461 tttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||||| ||||||   | ||||||||||||||||||||||||||    
T  5871845 tctacccatttttccaatctcac-caatgaacaagacactcaatgattttca 5871795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 472
Target Start/End: Original strand, 9927502 - 9927612
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||    
T  9927502 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 9927600  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  9927601 tctacccatttt 9927612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 34570458 - 34570607
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||  | ||||||||||||||||||||||||| || | |||||||| |||||||    
T  34570458 attgatctctccaatccactatcaatgagttctt-acaaagagatacaattgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 34570556  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || | |||||  |||||||   | ||||||||||||||||||||||||||    
T  34570557 tctacctattttcccaatctc-accaatgaacaagacactcaatgattttca 34570607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 390 - 461
Target Start/End: Original strand, 34788847 - 34788918
Alignment:
Q  390 ttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||    
T  34788847 ttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctctccaagagcaatcctaattt 34788918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 37740749 - 37740600
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||    
T  37740749 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 37740651  T
Q  461 tttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 511  Q
    | || || |||| | ||||||   | |||||||||||||||| |||||||||    
T  37740650 tataccctttttccaaatctc-accaatgaacaagacactcagtgattttca 37740600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 270 - 472
Target Start/End: Complemental strand, 40632664 - 40632459
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttg 364  Q
    ||||| ||||||||||||||||||||| | |||| ||||||   |||||||||||| | |||||||||||||||  |||  |||| |       |  |||    
T  40632664 caaaggataaacaagataaagagagtaaaaaaaagataacaacaccaagaaatgtttacccagttcggtccaact-tgacttactttagaggagagattg 40632566  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttta 464  Q
    || |||| ||||||||| |||||||||||| |||||||||||||||   |||||||||||||||||||||||||||| | ||||||||  ||||||| ||    
T  40632565 atctctccaatccactatcaatgagttctt-acaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaactctaatttcta 40632467  T
Q  465 tccatttt 472  Q
     |||||||    
T  40632466 cccatttt 40632459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 48143167 - 48143017
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| |  |||||||||||||| ||||||||||||||||||||||||| || | |||||||| |||||||    
T  48143167 attgatctctccaatccactatcaatgagttctt-atgaagagatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 48143069  T
Q  461 tttatccattttt--caatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |  |||||  |||||||   | ||||||||||||||||||||||||||    
T  48143068 tctacctttttttcccaatctc-accaatgaacaagacactcaatgattttca 48143017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 383 - 511
Target Start/End: Original strand, 35369511 - 35369634
Alignment:
Q  383 caatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctt 482  Q
    ||||||||||||||||||||||||     |||||  |||||||||| |||| ||||||| ||||||||||||||||||| ||  |||||  |||| ||||    
T  35369511 caatgagttctttacaaagagata-----gagttttaagaaattagtttcatcaagctcaccaagaacaaacctaatttctactcatttcccaatgtctt 35369605  T
Q  483 tccatgaacaagacactcaatgattttca 511  Q
     | ||||||||||||||||||||||||||    
T  35369606 gcaatgaacaagacactcaatgattttca 35369634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 326 - 472
Target Start/End: Original strand, 50262708 - 50262855
Alignment:
Q  326 ccagttcggtccaacaatgatctactctnnnnnnna--ttgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaa 423  Q
    |||||||||||||||||||| |||||||       |  ||||| |||| |||| |||| |||||||||||| ||||||||||||||| | ||||||||||    
T  50262708 ccagttcggtccaacaatgacctactctggaggaaagattgatatctccaatcaactatcaatgagttctt-acaaagagatacaaatgggttacaagaa 50262806  T
Q  424 attagcttcaacaagctctccaagaacaaacctaatttttatccatttt 472  Q
    |||||||||||||||||| | |||||||| | ||||||  |||||||||    
T  50262807 attagcttcaacaagctcacaaagaacaaccgtaatttcgatccatttt 50262855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 12745480 - 12745629
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||| ||  ||||| || | |||||||| |||||||    
T  12745480 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagttttgacaagttcacaaagaacaaccctaatt 12745578  T
Q  461 tttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||| | ||||||   | ||||||||||||||||||||||||||    
T  12745579 tctacccattttcctaatctc-gccaatgaacaagacactcaatgattttca 12745629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 36463433 - 36463582
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||  ||| |||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | | |||||  |||||||    
T  36463433 attgatctctccaatccactgtcaaagagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaacagccctaatt 36463531  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | ||||||||||  |||||||   | |||||||||||||||||||| |||||    
T  36463532 tctatccattttcccaatctc-accaatgaacaagacactcaatgaatttca 36463582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 373 - 472
Target Start/End: Complemental strand, 54883132 - 54883034
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 472  Q
    ||||||||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | || ||||| |||||||| || |||||||    
T  54883132 aatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaaaaacaaccctaatttctacccatttt 54883034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 368 - 472
Target Start/End: Complemental strand, 2209831 - 2209727
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatc 466  Q
    |||| ||||||||| |||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||| | ||||| || |||||||| || |    
T  2209831 tctccaatccactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagcttcaacaagctcacaaagaaaaaccctaatttctacc 2209733  T
Q  467 catttt 472  Q
    ||||||    
T  2209732 catttt 2209727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 368 - 453
Target Start/End: Complemental strand, 4588076 - 4587992
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa 453  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  | |||||||||    
T  4588076 tctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagcttcaacaagcttacaaagaacaaa 4587992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 312 - 508
Target Start/End: Original strand, 21703829 - 21704027
Alignment:
Q  312 caagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnn-attgatttctctaatccactaccaatgagttctttacaaagagatacaaa 410  Q
    ||||||||||| | ||||||||||| |||||||| ||||| |        |||||| |||| ||||||||  |||||||||||||||||| |||||||||    
T  21703829 caagaaatgtttacccagttcggtcaaacaatgacctactatggggatagattgatatctccaatccactgtcaatgagttctttacaaaaagatacaaa 21703928  T
Q  411 agagttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattt 508  Q
    |  | |||||||||| | |||||||||||| || |||||| ||||||||||| || |  ||| |||||||||| ||| |||||| | ||| ||||||||    
T  21703929 aagggtacaagaaatcatcttcaacaagctttctaagaacaaaacctaatttctacctttttctcaatctcttcccaagaacaatagacttaatgattt 21704027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 270 - 472
Target Start/End: Complemental strand, 41639645 - 41639440
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttg 364  Q
    ||||| ||||||||||||||||||||| |||||  ||||||   |||||||||||| |  ||||||||||||||  ||| |||||||       |  |||    
T  41639645 caaaggataaacaagataaagagagtaaagaaacgataacaacaccaagaaatgttcactcagttcggtccaact-tgacctactctggaggagagattg 41639547  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttta 464  Q
    || |||| ||||||||| | |||||||||| ||||| ||||||||| | ||||||||||||||||||||| ||| || | |||||||| |||||||| ||    
T  41639546 atctctccaatccactatcgatgagttctt-acaaatagatacaaatgggttacaagaaattagcttcaaaaagttcacaaagaacaaccctaatttcta 41639448  T
Q  465 tccatttt 472  Q
     |||||||    
T  41639447 cccatttt 41639440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 41961351 - 41961222
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaa-----attgctcaca 610  Q
    |||||||||| || |||||||||||||||| ||| | |||||||| ||||||||||||| ||||||||||| ||||||| |||||      |||||||||    
T  41961351 tagaatctaaccctcaaaagagaaccaacccttagcttttgatttcctaaggatattcttttttggtctcccaagactcacccaagttacgttgctcaca 41961252  T
Q  611 aagactctcatttgatgtgtttccaaaccc 640  Q
     |||||||| ||| |||||||||| |||||    
T  41961251 tagactctcctttaatgtgtttcccaaccc 41961222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 383 - 508
Target Start/End: Complemental strand, 41961520 - 41961395
Alignment:
Q  383 caatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctt 482  Q
    |||||| ||||||||||||||||||||||   |||||||||||||||   | ||||||||||| |||||||| |||||| ||  | |||| |||||||||    
T  41961520 caatgacttctttacaaagagatacaaaatgattacaagaaattagcactaccaagctctccatgaacaaacttaatttctactctttttccaatctctt 41961421  T
Q  483 tccatgaacaagacactcaatgattt 508  Q
      ||||||||||| ||||||||||||    
T  41961420 ctcatgaacaagagactcaatgattt 41961395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 361 - 508
Target Start/End: Original strand, 12739594 - 12739740
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||| | ||||| ||||||||| | ||||||||||||||||||  ||||| || | |||||||| |||||||    
T  12739594 attgatctctccaatccactatcaatgagttcat-acaaatagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccctaatt 12739692  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattt 508  Q
    | ||||||||||  |||||||   | |||||||||||||||||||||||    
T  12739693 tctatccattttcccaatctc-accaatgaacaagacactcaatgattt 12739740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 361 - 508
Target Start/End: Original strand, 12747800 - 12747946
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||| | ||||| ||||||||| | ||||||||||||||||||  ||||| || | |||||||| |||||||    
T  12747800 attgatctctccaatccactatcaatgagttcat-acaaatagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccctaatt 12747898  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattt 508  Q
    | ||||||||||  |||||||   | |||||||||||||||||||||||    
T  12747899 tctatccattttcccaatctc-accaatgaacaagacactcaatgattt 12747946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 384 - 511
Target Start/End: Complemental strand, 53345319 - 53345192
Alignment:
Q  384 aatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaa-caaacctaatttttatccatttttcaatctctt 482  Q
    ||||||||||||||||| ||||| ||||| ||||||||||||||| |||||||||||| | ||||| ||| | |||||| ||||  ||| |||||||| |    
T  53345319 aatgagttctttacaaaaagatataaaagggttacaagaaattagtttcaacaagctcacaaagaatcaaccttaatttctatcattttctcaatctc-t 53345221  T
Q  483 tccatgaacaagacactcaatgattttca 511  Q
     | || |||||||||||||||||||||||    
T  53345220 ccgataaacaagacactcaatgattttca 53345192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 52095406 - 52095555
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||| || ||||| ||||||||||||||| | ||||||||||||||||||  ||||| || | |||||||| |||||||    
T  52095406 attgatctctccaatccactatcaaagatttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccctaatt 52095504  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  52095505 tctacccattttcccaatctc-accaatgaacaagacactcaatgattttca 52095555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 29999850 - 29999999
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||||||||||||   ||| ||||||||||||||||||||||||||||||  ||| | || | |||||||| |||||||    
T  29999850 attgatctctccaatccactatcaatgagttcttacaaaaaagatacaaaagagttacaagaaattagctttgacatgttcacaaagaacaaccctaatt 29999949  T
Q  461 tttatccatttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || || |||  |||||||   | ||||||||||||||||| ||||||||    
T  29999950 tctacccttttcccaatctc-accaatgaacaagacactcaacgattttca 29999999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 50674073 - 50674199
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 613  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||| ||||    
T  50674073 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaag 50674172  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  50674173 actctccactcatgtgtttcccaaccc 50674199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 12073333 - 12073236
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||||| ||| | ||||||||  |||||||| |||||||||||| || |||||||| ||||| |||||||||||    
T  12073333 tagaatctaacccccaaaagagaaccaacccttagcatttgatttcactaaggatcttctcttttggtttcataagactcacccaagttgctcacaaa 12073236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 383 - 511
Target Start/End: Original strand, 48142443 - 48142571
Alignment:
Q  383 caatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccatttttcaatctct 481  Q
    |||||||||||||||||||||||| | ||| ||||||||||| |||||||||||||||| | ||||||||| |||||||| ||||   ||  |||||||     
T  48142443 caatgagttctttacaaagagatatacaagggttacaagaaactagcttcaacaagctcacaaagaacaaaccctaatttctatcatgttcccaatctc- 48142541  T
Q  482 ttccatgaacaagacactcaatgattttca 511  Q
     || |||  |||||||||||||||||||||    
T  48142542 atcaatgggcaagacactcaatgattttca 48142571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 379319 - 379223
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| || |||||||||||||||| ||| |||||||||| |||||||| |||||||||| | ||  ||||||| ||||| |||||||||||    
T  379319 tagaatctaacccacaaaagagaaccaacccttagcctttgatttcctaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaa 379223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 6542223 - 6542374
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaat 459  Q
    |||||| |||| ||||||||| ||| |||||||| |||||||||||||||||  | |||||||||||| |||||||||||| | ||||||||| ||||||    
T  6542223 attgatctctccaatccactatcaacgagttctt-acaaagagatacaaaaggctaacaagaaattagtttcaacaagctcacaaagaacaaatcctaat 6542321  T
Q  460 ttttatccattttt---caatctctttccatgaacaagacactcaatgattttca 511  Q
    || || ||||||||   |||||||   | |||||||||||||||||| |||||||    
T  6542322 ttcta-ccattttttcccaatctc-cccaatgaacaagacactcaataattttca 6542374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 461
Target Start/End: Original strand, 12743969 - 12744068
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||  ||||| || | |||||||| |||||||    
T  12743969 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccctaatt 12744067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 461
Target Start/End: Original strand, 12744091 - 12744190
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||  ||||| || | |||||||| |||||||    
T  12744091 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccctaatt 12744189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 461
Target Start/End: Original strand, 12745358 - 12745457
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||  ||||| || | |||||||| |||||||    
T  12745358 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccctaatt 12745456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 41964540 - 41964429
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaat 459  Q
    |||||| |||| ||||||||| |||||||||| |||||||| ||||||||| | ||||||| |||||||||| ||||||||| | |||||||| ||||||    
T  41964540 attgatctctccaatccactatcaatgagttc-ttacaaagggatacaaaatgggttacaataaattagcttaaacaagctcacaaagaacaaccctaat 41964442  T
Q  460 ttttatccatttt 472  Q
    || || |||||||    
T  41964441 ttctacccatttt 41964429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 395 - 511
Target Start/End: Original strand, 55085442 - 55085557
Alignment:
Q  395 tacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaag 494  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||| | |||||||| | |||||| || | ||||| |||||||   | |||||||||    
T  55085442 tacaaagagatacaaatggtttacaagaaattagcttcaacaagctcacaaagaacaaccttaatttctacctattttccaatctc-accaatgaacaag 55085540  T
Q  495 acactcaatgattttca 511  Q
    ||| |||||||||||||    
T  55085541 acagtcaatgattttca 55085557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 519 - 586
Target Start/End: Complemental strand, 33089825 - 33089758
Alignment:
Q  519 aatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcc 586  Q
    ||||||| | ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||    
T  33089825 aatctaacctccaaaagagaaccaacctttagcctttgattttctaaggatcttctcttttggtctcc 33089758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 529 - 628
Target Start/End: Original strand, 35370578 - 35370677
Alignment:
Q  529 ccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgt 628  Q
    ||||||||||||||||||||| |||||||||| | || ||| |||| ||||||| |||  |||||| ||||| ||||| |||||||||||| ||||||||    
T  35370578 ccaaaagagaaccaaccattagcctttgatttcccaaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatgt 35370677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 361 - 472
Target Start/End: Original strand, 52467398 - 52467508
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||  |||| || |||||| |||||||| | ||||||||| |||||||||||||||||| | ||||||||||||||||    
T  52467398 attgatctctccaatccactatcaaaaagttatt-acaaagtgatacaaatgggttacaagatattagcttcaacaagctcacaaagaacaaacctaatt 52467496  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  52467497 tctacccatttt 52467508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 361 - 431
Target Start/End: Original strand, 5370127 - 5370196
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagctt 431  Q
    |||||| |||||| ||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  5370127 attgatctctctagtccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctt 5370196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 614
Target Start/End: Complemental strand, 35662381 - 35662284
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaaga 614  Q
    ||||||||||  |||||||||||||||||| ||| | |||||||| |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||||    
T  35662381 tagaatctaacacccaaaagagaaccaacccttagc-tttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaga 35662284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 41964355 - 41964230
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 613  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||| ||||    
T  41964355 tagaatctaa-ccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaag 41964257  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  41964256 actctctactcatgtgtttcccaaccc 41964230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 361 - 474
Target Start/End: Complemental strand, 21688373 - 21688261
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||| || || ||||||||||||  | |||||||||||| ||||||||| ||||||| |||||||||||| | |||||||| |||||||    
T  21688373 attgatctctccaattcattatcaatgagttcttc-cgaagagatacaaatgagttacaaaaaattagtttcaacaagctcacaaagaacaaccctaatt 21688275  T
Q  461 tttatccatttttc 474  Q
    | || |||||||||    
T  21688274 tctacccatttttc 21688261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 369 - 508
Target Start/End: Original strand, 44967881 - 44968020
Alignment:
Q  369 ctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatcc 467  Q
    |||||||| |||  ||| ||||| |||||||||||||||||| | ||||||||||||| |||||| |||||||||||||| | ||||||||||| || ||    
T  44967881 ctctaatctactctcaacgagttttttacaaagagatacaaatg-gttacaagaaattggcttcagcaagctctccaagagcaaaacctaatttcta-cc 44967978  T
Q  468 atttt-tcaatctctttccatgaacaagacactcaatgattt 508  Q
    |||||  ||||||||| ||| |||||| |  |||||||||||    
T  44967979 attttcccaatctcttcccaagaacaacaggctcaatgattt 44968020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 519 - 612
Target Start/End: Complemental strand, 46703437 - 46703344
Alignment:
Q  519 aatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    ||||||| ||||||||||||||||||  ||| |||||||||| |||||||| |||||||||||| ||  ||||||| ||||| ||||| |||||    
T  46703437 aatctaacccccaaaagagaaccaacttttagcctttgatttcctaaggattttctcttttggtttcacaagactcacccaagttgctgacaaa 46703344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 419 - 511
Target Start/End: Original strand, 35370449 - 35370541
Alignment:
Q  419 aagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    |||||||||| |||| ||||||| ||||||||||||||||||| ||  |||||  |||| |||| | |||||||||||||||||| |||||||    
T  35370449 aagaaattagtttcatcaagctcaccaagaacaaacctaatttctactcatttcccaatgtcttgcaatgaacaagacactcaataattttca 35370541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 3913572 - 3913423
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||| ||||||| | |||| ||||||||||||||||||| ||| | |||||||   ||||||    
T  3913572 attgatctctccaatccactatcaatgagttctt-acaaagatatacaaatgggttaaaagaaattagcttcaacaaactcacaaagaacagctctaatt 3913474  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | ||  ||||||  |||||||     ||||||||||||||||||||||||||    
T  3913473 tctactcattttcccaatctc-acaaatgaacaagacactcaatgattttca 3913423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 368 - 474
Target Start/End: Original strand, 13992344 - 13992448
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| |||||||||||| |||| |||||||||||||||||||||||||||| ||  ||||| || | |||||||| |||||||| || ||    
T  13992344 tctccaatccactatcaatgagttctt-acaa-gagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaaccctaatttctaccc 13992441  T
Q  468 atttttc 474  Q
     ||||||    
T  13992442 ttttttc 13992448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 45687233 - 45687326
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaattt 461  Q
    |||| ||||||||| |||||||||||| ||||| ||||||||| |||||| |||||||||||||  |||||||| | |||||| |||||||||||    
T  45687233 tctccaatccactatcaatgagttctt-acaaatagatacaaatgagttataagaaattagctttgacaagctcacaaagaacaaaacctaattt 45687326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 383 - 461
Target Start/End: Original strand, 22628958 - 22629038
Alignment:
Q  383 caatgagttctttacaaagagata--caaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||||||||||||| |||||| |  ||||||||||| ||||||||| |||||| ||||||||||||| ||| ||||||||    
T  22628958 caatgagttctttactaagagagatgcaaaagagttataagaaattaacttcaataagctctccaagagcaatcctaattt 22629038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 54882961 - 54882864
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||   |||||| ||||| || ||||||||    
T  54882961 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacgagactcacccaagtttctcacaaa 54882864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 385 - 461
Target Start/End: Original strand, 16422674 - 16422750
Alignment:
Q  385 atgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||||||| ||||||||| ||||||||| ||| | ||||||||||||||| |||||||| || ||||||| ||||||    
T  16422674 atgagttcattacaaagatatacaaaagggtttctagaaattagcttcaaaaagctctcaaaaaacaaacataattt 16422750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 33989802 - 33989706
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| | |||||||||||| || | ||| |||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  33989802 tagaatctaacctccaaaagagaacaaatccttagcctttgattacctaaggatcttctcttttggtttcaaaagactcacccaagttgctcacaaa 33989706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 373 - 511
Target Start/End: Original strand, 5207898 - 5208035
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccattt 471  Q
    ||||||||| |||||||||||| ||||| ||||| | ||| ||| ||| ||||||||||||||||| || | ||||||||| |||||||| || || |||    
T  5207898 aatccactatcaatgagttctt-acaaatagatatacaagggttgcaataaattagcttcaacaagttcacaaagaacaaaccctaatttctaccctttt 5207996  T
Q  472 ttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | ||||| | | | ||||||||| |||| |||||||||||    
T  5207997 tccaatcac-tccaatgaacaagtcactaaatgattttca 5208035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 377 - 461
Target Start/End: Original strand, 6199932 - 6200018
Alignment:
Q  377 cactaccaatgagttctttacaaaga--gatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||| ||||||||| |||||||| |  |||||||||||||||||| ||||||| ||||||||  | || |||||||||||||||||    
T  6199932 cactatcaatgagttatttacaaatatagatacaaaagagttacaataaattagtttcaacaaagtgtctaagaacaaacctaattt 6200018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 29254618 - 29254469
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||| |||||||| ||||||||| ||||| | ||| |||||||||| |||||||||||||   || |||||  ||||||    
T  29254618 attgatctctccaatccactatcaacgagttctt-acaaagagacacaaatgggttgcaagaaattaacttcaacaagctcataaaaaacaactctaatt 29254520  T
Q  461 tttatcc-atttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || || ||||  |||||||   | ||||||||||||||||||||||||||    
T  29254519 tctacccaatttcccaatctc-accaatgaacaagacactcaatgattttca 29254469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 582
Target Start/End: Original strand, 50262925 - 50262992
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggt 582  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||  |||||| | ||||||||||||    
T  50262925 tagaatctaacccccaaaagagaaccaaccattagcctttgatttcactaagggtcttctcttttggt 50262992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 6655897 - 6655771
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 613  Q
    |||||||||| ||| ||||||||| ||||| ||| ||||||||||| |||| ||| |||||||||||| ||  ||||||| ||||| ||||||| ||| |    
T  6655897 tagaatctaaccccaaaaagagaaacaacctttagcctttgattttactaatgatcttctcttttggtttcacaagactcacccaagttgctcagaaatg 6655798  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  6655797 actctccactcatgtgtttcccaaccc 6655771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 55085592 - 55085718
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 613  Q
    |||||||||| ||||||| ||||| ||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| | ||| ||||||||||| |    
T  55085592 tagaatctaacccccaaaggagaatcaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacacaagttgctcacaaatg 55085691  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  55085692 actctccactcatgtgtttcccaaccc 55085718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 516 - 596
Target Start/End: Complemental strand, 2209654 - 2209573
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgc 596  Q
    |||||||||| |||||||||||||||||||  || ||||||||||  |||||||| |||||||||||| ||  |||||||||    
T  2209654 tagaatctaacccccaaaagagaaccaacccatagcctttgatttcactaaggatcttctcttttggtttcacaagactcgc 2209573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 390 - 510
Target Start/End: Complemental strand, 3677559 - 3677438
Alignment:
Q  390 ttctttacaaagagatacaaaagagttacaagaaa-ttagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatg 488  Q
    |||| |||||||||||||||||   |||||| ||| |||||||||| ||| | | ||||||||| | ||||||  | || ||||||||| |||| |||||    
T  3677559 ttctctacaaagagatacaaaatgattacaaaaaaattagcttcaataagtttttcaagaacaaccttaatttccacccgtttttcaatatcttcccatg 3677460  T
Q  489 aacaagacactcaatgattttc 510  Q
    ||| ||| ||||||||||||||    
T  3677459 aactagagactcaatgattttc 3677438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 519 - 612
Target Start/End: Complemental strand, 12119475 - 12119383
Alignment:
Q  519 aatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    ||||||| ||||||||||||||||||| ||| | || |||||  ||||||| |||||||||||| ||  ||||| | |||||||||||||||||    
T  12119475 aatctaacccccaaaagagaaccaacccttaac-ttcgatttcttaaggatcttctcttttggtttcacaagacacacccaaattgctcacaaa 12119383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 368 - 495
Target Start/End: Original strand, 1122866 - 1122993
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaaga-gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatc 466  Q
    |||| |||| |||| |||||||||  |||||||||||||||||| | ||||| | |||||| |||||||||  | ||||| ||| ||| |||||| ||||    
T  1122866 tctcaaatctactatcaatgagtttcttacaaagagatacaaaaaatgttactataaattaacttcaacaaattttccaaaaac-aacgtaatttctatc 1122964  T
Q  467 catttttcaatctctttccatgaacaaga 495  Q
    |||||| ||||||| | ||||||| ||||    
T  1122965 cattttccaatctcctcccatgaataaga 1122993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 633
Target Start/End: Original strand, 6200085 - 6200209
Alignment:
Q  510 caattttagaatctaatccccaaaagagaac-caaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctca 608  Q
    ||||| ||||||||||| ||||||| | ||  ||||| ||||| ||||| ||| ||||||| |||||||||||| ||  |||| ||  ||||||||||||    
T  6200085 caattctagaatctaatgcccaaaaaaaaaatcaacccttatcatttgactttataaggatcttctcttttggtatctcaagattcatccaaattgctca 6200184  T
Q  609 caaagactctcatttgatgtgtttc 633  Q
     || ||||||||| | |||||||||    
T  6200185 taaggactctcatctcatgtgtttc 6200209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 517 - 612
Target Start/End: Complemental strand, 8665347 - 8665251
Alignment:
Q  517 agaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    ||||||||| |||||||||| |||||||   || ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  8665347 agaatctaacccccaaaagaaaaccaacacataacctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 8665251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 527 - 639
Target Start/End: Original strand, 35369679 - 35369790
Alignment:
Q  527 ccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgat 626  Q
    ||||||||||||||||||| ||| |||||||||  | ||| || |||| ||||| | |||  |||||| ||||| ||||| ||||||||| || ||||||    
T  35369679 ccccaaaagagaaccaacccttagcctttgattcccaaag-atcttctattttgctatccatagactcacccaagttgcttacaaagactatcttttgat 35369777  T
Q  627 gtgtttccaaacc 639  Q
    ||||||| |||||    
T  35369778 gtgtttctaaacc 35369790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 509
Target Start/End: Original strand, 3739178 - 3739295
Alignment:
Q  393 tttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaac-ctaatttttatccatttt-tcaatctctttccatgaa 490  Q
    ||||||||||||||||| || || | |||||||||||||||| ||| | | ||||||||||  |||||||||| || |||| |||||||||||| | |||    
T  3739178 tttacaaagagatacaatag-gtcataagaaattagcttcaataagttattcaagaacaaaatctaatttttaccctttttttcaatctctttcaaagaa 3739276  T
Q  491 caagacactcaatgatttt 509  Q
      ||| |||||||||||||    
T  3739277 acagagactcaatgatttt 3739295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 438
Target Start/End: Original strand, 40975060 - 40975129
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaag 438  Q
    ||||||||| |||| ||| |||| | |||||||||||||||| |||||||| |||||||| ||||||||||    
T  40975060 tctctaatctactatcaaagagt-cattacaaagagatacaatagagttaccagaaattaacttcaacaag 40975129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 472
Target Start/End: Complemental strand, 41639351 - 41639277
Alignment:
Q  398 aaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 472  Q
    ||||||||||||| | ||||||||||||||||||||| ||| |  | |||||||| |||||||| || |||||||    
T  41639351 aaagagatacaaatgggttacaagaaattagcttcaaaaagtttacaaagaacaaccctaatttctacccatttt 41639277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 511
Target Start/End: Original strand, 52082733 - 52082850
Alignment:
Q  394 ttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaaca 492  Q
    ||||||||||||||||| | ||||||||||||||| ||  ||||| || | |||||||| |||| ||| || |||||||  |||||||   | |||||||    
T  52082733 ttacaaagagatacaaatgggttacaagaaattagttttgacaagttcacaaagaacaaccctagtttctacccattttcccaatctc-accaatgaaca 52082831  T
Q  493 agacactcaatgattttca 511  Q
    ||||| |||||||||||||    
T  52082832 agacagtcaatgattttca 52082850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 37229765 - 37229915
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagata-caaaagagttacaagaaattagcttcaacaagctctccaagaaca-aacctaa 458  Q
    |||||| |||| |||||||||  ||||||||| |||||||||||||  ||||| ||||||| ||||| |||| ||||||||| | ||||||| | |||||    
T  37229765 attgatctctccaatccactataaatgagttc-ttacaaagagatataaaaagggttacaacaaatttgctttaacaagctcacaaagaacacaccctaa 37229863  T
Q  459 tttttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    ||| || |||||||  |||||||   | |||||||||||||||| |||||||||    
T  37229864 tttcta-ccattttcccaatctc-accaatgaacaagacactcattgattttca 37229915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 517 - 612
Target Start/End: Complemental strand, 8648078 - 8647982
Alignment:
Q  517 agaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    ||||||||| ||||||||||||||||||   || | ||||||||  |||||||| |||||||||| | ||  ||||||| ||||| |||||||||||    
T  8648078 agaatctaacccccaaaagagaaccaacacataacatttgatttcactaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaa 8647982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 51337188 - 51337039
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa--cctaa 458  Q
    |||||| |||||||| ||||| |||||||||| ||| ||||||||||||||| |||| || |||||| |||  | |||||| | |||||||||  | |||    
T  51337188 attgatctctctaatacactatcaatgagttc-ttaaaaagagatacaaaagggttataataaattatctt--aaaagctcacaaagaacaaatccgtaa 51337092  T
Q  459 tttttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    ||| || || |||| ||||||||   | ||||||| ||||||||||||||||||    
T  51337091 tttctaccctttttctcaatctc-accaatgaacaggacactcaatgattttca 51337039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 582
Target Start/End: Original strand, 27417189 - 27417255
Alignment:
Q  517 agaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggt 582  Q
    ||||||||| ||||||||||||||||||| |||  |||||||||  |||||||| |||| |||||||    
T  27417189 agaatctaacccccaaaagagaaccaacccttagtctttgatttcactaaggatcttcttttttggt 27417255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 31495367 - 31495461
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||| |||| |||| ||||||||||||   |||||||||||||| ||||||||||||||||| ||  ||||| || | | |||||| ||||||||    
T  31495367 tctccaatcaactatcaatgagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttcacaatgaacaatcctaattt 31495461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 461
Target Start/End: Original strand, 28684894 - 28684955
Alignment:
Q  400 agagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||| ||||||||||||||||||| |||||| ||||||| | |||||||  | |||||||||    
T  28684894 agagttacaaaagagttacaagaagttagctccaacaagttatccaagagtacacctaattt 28684955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 37755026 - 37755095
Alignment:
Q  383 caatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaa 452  Q
    ||||||||| |||| ||||||||| ||||  |||||||||||||| ||||| |||  |||| ||||||||    
T  37755026 caatgagttttttagaaagagataaaaaaaggttacaagaaattatcttcaccaaattctctaagaacaa 37755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 461
Target Start/End: Original strand, 51904491 - 51904551
Alignment:
Q  400 agagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||||||||| ||||| ||||||||||| ||| |||| ||||||||||||| | |||||||    
T  51904491 agagatacaaa-gagttgcaagaaattagattcgacaaactctccaagaacatatctaattt 51904551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 461
Target Start/End: Complemental strand, 52065706 - 52065622
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||| |||||||||  | |||||||||||||||| | ||||||  ||| ||||||||| |||||||| |||||| ||||||||||    
T  52065706 cactatcaatgagtttctaacaaagagatacaaaaggggttacagaaaaatagcttcaataagctctctaagaac-aacctaattt 52065622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 413 - 453
Target Start/End: Original strand, 39662348 - 39662388
Alignment:
Q  413 agttacaagaaattagcttcaacaagctctccaagaacaaa 453  Q
    ||||||||||||||||||||||||| || ||||||| ||||    
T  39662348 agttacaagaaattagcttcaacaatctttccaagagcaaa 39662388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 516 - 560
Target Start/End: Complemental strand, 40632386 - 40632342
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt 560  Q
    |||||||||| ||||||||||||||||||| ||| | ||||||||    
T  40632386 tagaatctaacccccaaaagagaaccaacccttaacatttgattt 40632342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 44569890 - 44569930
Alignment:
Q  148 taggtaacttcaaatctcacatcaataaaattgagatttgt 188  Q
    ||||||| || ||||||||||||||||||||| ||||||||    
T  44569890 taggtaattttaaatctcacatcaataaaatttagatttgt 44569930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #115
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 55085394 - 55085430
Alignment:
Q  274 gaataaacaagataaagagagtatagaaaatataaca 310  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  55085394 gaataaacaagataaagagagtaaagaaaagataaca 55085430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 3e-50; HSPs: 99)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 374 - 511
Target Start/End: Original strand, 35138762 - 35138899
Alignment:
Q  374 atccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt 473  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||| |||||| || |||||| |    
T  35138762 atccactatcaatgagttctttacaaagagatacaaaagagttgcaagaaattaacttcaacaaactcaccaagaacaaacataatttctacccatttct 35138861  T
Q  474 caatctctttccatgaacaagacactcaatgattttca 511  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35138862 caatctctttccatgaacaagacactcaatgattttca 35138899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 270 - 501
Target Start/End: Complemental strand, 46860694 - 46860459
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttg 364  Q
    ||||| ||||||||||||||||||||| |||||| ||||||   |||| ||||||| ||||| |||||||||||||||| |||||||       |  |||    
T  46860694 caaaggataaacaagataaagagagtaaagaaaagataacaacaccaaaaaatgttcatccaattcggtccaacaatgacctactctggaggaaagattg 46860595  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttta 464  Q
    || |||| ||||||||| ||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||| | ||||||||||||||||| ||    
T  46860594 atctctccaatccactatcaatgagttatt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttcta 46860496  T
Q  465 tccatttt-tcaatctctttccatgaacaagacactca 501  Q
     ||||||| ||||||||   | ||||||||||||||||    
T  46860495 cccattttctcaatctc-accaatgaacaagacactca 46860459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 383 - 507
Target Start/End: Complemental strand, 20937759 - 20937635
Alignment:
Q  383 caatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctt 482  Q
    ||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| |||||| || | ||||| | |||||||    
T  20937759 caatgagttcttttcaaagagatacaaaagggttacaagaaattaacttcaacaagctctccaaaaacaaacataatttctacctattttccgatctctt 20937660  T
Q  483 tccatgaacaagacactcaatgatt 507  Q
    || |||||||||| |||||||||||    
T  20937659 tctatgaacaagagactcaatgatt 20937635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 51398931 - 51398789
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| || | |||||||| |||||||| || ||    
T  51398931 tctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagttcactaagaacaaccctaatttctaccc 51398833  T
Q  468 attttt-caatctctttccatgaacaagacactcaatgattttca 511  Q
    |||||| |||||||  || ||||||||||||||||||||||||||    
T  51398832 atttttccaatctc-atcaatgaacaagacactcaatgattttca 51398789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 7762389 - 7762240
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||||    
T  7762389 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 7762291  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || || |||| ||||||||   | ||||| ||||||||||||||||||||    
T  7762290 tctaccctttttctcaatctc-accaatgaataagacactcaatgattttca 7762240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 377 - 511
Target Start/End: Original strand, 26323133 - 26323267
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 476  Q
    ||||| ||||||||| ||||| |||| ||||||||  |||||||||||||||||||||||| |||| ||| ||||||||||||||||| || ||| ||||    
T  26323133 cactatcaatgagttttttaccaagatatacaaaaaggttacaagaaattagcttcaacaaactcttcaaaaacaaacctaatttttacccttttctcaa 26323232  T
Q  477 tctctttccatgaacaagacactcaatgattttca 511  Q
    |||| | |||||||||||||||| |||||| ||||    
T  26323233 tctcatcccatgaacaagacacttaatgatgttca 26323267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 361 - 516
Target Start/End: Complemental strand, 40735507 - 40735353
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| |||||||||||||||   ||||||| |||||||||||||||||||| | |||||||| |||||||    
T  40735507 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaactggttacaataaattagcttcaacaagctcacaaagaacaaccctaatt 40735409  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttcaatttt 516  Q
    | || ||||||| ||||||||   | |||||||||||||||||||||||||| ||||    
T  40735408 tctacccattttctcaatctc-accaatgaacaagacactcaatgattttcactttt 40735353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 34491336 - 34491226
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | |||||||| |||||||    
T  34491336 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatt 34491238  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  34491237 tctacccatttt 34491226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 53921547 - 53921696
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| |||||  |||||||| |||||||||||||||||||| ||||||||| | || |||||||||||||    
T  53921547 attgatctctccaatccactatcaatgagttctt-acaaaatgatacaaatgagttacaagaaattagctttaacaagctcacaaacaacaaacctaatt 53921645  T
Q  461 tttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||||| ||||||   | ||||||||||||||||||||||||||    
T  53921646 tctacccatttttccaatctcac-caatgaacaagacactcaatgattttca 53921696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 388 - 511
Target Start/End: Original strand, 8166527 - 8166651
Alignment:
Q  388 agttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccat 487  Q
    ||||||||||||||||||||||||  |||| |||| |||| ||||||||| ||||||||||||||||||||||| ||  ||||| |||||||| ||||||    
T  8166527 agttctttacaaagagatacaaaaaggttataagatattaacttcaacaaactctccaagaacaaacctaatttctactcatttatcaatctc-ttccat 8166625  T
Q  488 gaacaag--acactcaatgattttca 511  Q
    |||||||  |||||||||||||||||    
T  8166626 gaacaagacacactcaatgattttca 8166651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 5236500 - 5236649
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| |||||| || |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||    
T  5236500 attgatctctcgaatccattatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 5236598  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  5236599 tctacccattttcccaatctc-accaatgaacaagacactcaatgattttca 5236649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 22835046 - 22835195
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| |||||| |||||||| | |||||||||||||||||| ||||||||| | ||||||||||||||||    
T  22835046 attgatctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatt 22835144  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||     ||||||||||||||||||||||||||    
T  22835145 tctacccattttcccaatctc-acaaatgaacaagacactcaatgattttca 22835195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 30236249 - 30236101
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| |||||||||||||||   |||||||||||||||||||||||||||| | |||||||| |||||||    
T  30236249 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatt 30236151  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||  || ||||||||||||||| ||||||||||    
T  30236150 tctacccattttcccaatctc-atcaatgaacaagacactc-atgattttca 30236101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 40734622 - 40734473
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| |||||| |||||||| | ||||||||||||||| |||||||||||| | |||||||| |||||||    
T  40734622 attgatctctccaatccactatcaatgagttctt-acaaagggatacaaatgtgttacaagaaattaggttcaacaagctcacaaagaacaaccctaatt 40734524  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  40734523 tctacccattttcccaatctc-accaatgaacaagacactcaatgattttca 40734473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 368 - 508
Target Start/End: Original strand, 1313855 - 1313996
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatc 466  Q
    ||||||||||| || ||||||||||||| |||||| |||||||||  || |||||||||||||| |||||||||||||||||| |||| ||||||||| |    
T  1313855 tctctaatccaatatcaatgagttcttttcaaagatatacaaaaggcttgcaagaaattagctttaacaagctctccaagaacaaaacataatttttacc 1313954  T
Q  467 catttttcaatctctttccatgaacaagacactcaatgattt 508  Q
    | ||| ||||||||||  || ||| |||| ||||||| ||||    
T  1313955 cttttctcaatctcttctcaagaataagagactcaataattt 1313996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 7764581 - 7764442
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||| || | |||||||| |||||||| || ||    
T  7764581 tctccaatccactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagctttaacaagttcacaaagaacaaccctaatttctaccc 7764483  T
Q  468 atttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
      |||||  ||||   | ||||||||||||||||||||||||||    
T  7764482 --ttttccctctc-accaatgaacaagacactcaatgattttca 7764442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 39153412 - 39153554
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| |||||||||||| | |||| |||||||| |||||||||||||||||||| ||||||||| | | ||||||||||||||| || ||    
T  39153412 tctccaatccactatcaatgagttctt-ataaagggatacaaatgagttacaagaaattagcttaaacaagctcacaatgaacaaacctaatttctaccc 39153510  T
Q  468 atttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    |||||  |||||||    |||||||||||||||||||||||||||    
T  39153511 attttcccaatctc-acacatgaacaagacactcaatgattttca 39153554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 760971 - 760822
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| |||||| |||||||| | |||||||||||||||||| ||||||||| | ||||||| ||||||||    
T  760971 attgatctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacagacctaatt 760873  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||     ||||||||||||||||||||||||||    
T  760872 tctacccattttcccaatctc-acaaatgaacaagacactcaatgattttca 760822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 373 - 495
Target Start/End: Original strand, 4055819 - 4055941
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaaga-gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattt 471  Q
    ||||||||| |||||||||  |||||||||||||||||||| |||||||||||||| |||  ||||| ||||||||||| |||||||||| || ||||||    
T  4055819 aatccactatcaatgagtttcttacaaagagatacaaaagaggttacaagaaattaacttttacaagttctccaagaac-aacctaatttctacccattt 4055917  T
Q  472 ttcaatctctttccatgaacaaga 495  Q
      ||||||||| ||||||||||||    
T  4055918 cccaatctcttcccatgaacaaga 4055941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 4570076 - 4569966
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| | | |||||| |||||||    
T  4570076 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaataagctcacaatgaacaaccctaatt 4569978  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  4569977 tctacccatttt 4569966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 383 - 510
Target Start/End: Complemental strand, 5373336 - 5373207
Alignment:
Q  383 caatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccattttt--caatct 479  Q
    |||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||||||   ||||||||| |||||||| || || |||||  ||||||    
T  5373336 caatgagttccttacaaagagatataaaagggttacaataaattagcttcaacaagctcaaaaagaacaaagcctaatttctacccttttttcccaatct 5373237  T
Q  480 ctttccatgaacaagacactcaatgattttc 510  Q
    | ||| |||||||||||||||||||||||||    
T  5373236 c-ttcaatgaacaagacactcaatgattttc 5373207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 31314569 - 31314420
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||| |||||||| ||||| ||||||||| | ||||||||||||||||||||||||| || | | |||||| |||||||    
T  31314569 attgatctctccaatccactatcaaagagttctt-acaaaaagatacaaatgggttacaagaaattagcttcaacaagatcacaatgaacaaccctaatt 31314471  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||| ||||||||   | ||||||||||||||||||||||||||    
T  31314470 tctacccattttctcaatctc-acctatgaacaagacactcaatgattttca 31314420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 368 - 509
Target Start/End: Complemental strand, 32891221 - 32891080
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatc 466  Q
    |||| ||||||||| ||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | |||||| |||| |||||| || |    
T  32891221 tctccaatccactatcaacgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacttaatttctacc 32891123  T
Q  467 catttt-tcaatctctttccatgaacaagacactcaatgatttt 509  Q
    |||||| ||||||||   | | ||||||||||||||||||||||    
T  32891122 cattttctcaatctc-accgaagaacaagacactcaatgatttt 32891080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 44331669 - 44331520
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||| ||||||| ||||||||||||||| |  ||||||||||||||||||||||||||| | | |||||| |||||||    
T  44331669 attgatctctccaatccactatcaataagttctt-acaaagagatacaaatggcttacaagaaattagcttcaacaagctcacaatgaacaaccctaatt 44331571  T
Q  461 tttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||| | ||||||   | ||||||||||||||||||||||||||    
T  44331570 tctacccattttcctaatctc-accaatgaacaagacactcaatgattttca 44331520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 44700522 - 44700671
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||| |||||||| |||||||||||||||   |||||||||||||||||||||||| ||| | |||||||| |||||||    
T  44700522 attgatctctccaatccactatcaaagagttctt-acaaagagatacaaataggttacaagaaattagcttcaacaaactcacaaagaacaaccctaatt 44700620  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  44700621 tctacccattttcccaatctc-accaatgaacaagacactcaatgattttca 44700671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 45095287 - 45095139
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||    
T  45095287 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatt 45095189  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  45095188 tcta-ccattttcccaatctc-accaatgaacaagacactcaatgattttca 45095139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 530 - 640
Target Start/End: Complemental strand, 34795795 - 34795685
Alignment:
Q  530 caaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtg 629  Q
    ||||||||||||| || ||| ||||||||||||||||||| |||||||||||||||| ||||||| ||||| || || ||||| |||||| |||||||||    
T  34795795 caaaagagaaccatcccttagcctttgattttctaaggatcttctcttttggtctcccaagactcacccaagtttcttacaaaaactctcctttgatgtg 34795696  T
Q  630 tttccaaaccc 640  Q
    | ||| |||||    
T  34795695 tatcccaaccc 34795685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 414 - 511
Target Start/End: Original strand, 3148087 - 3148184
Alignment:
Q  414 gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| |||||||||| |||  ||||| | ||||||| |||||||    
T  3148087 gttacaagaaattagcttcaacaagctcttcaagaagaaacctaatttctatccatttctcaatctcttcccacaaacaaaagactcaattattttca 3148184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 270 - 472
Target Start/End: Original strand, 43401745 - 43401956
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaat------ataacaccaagaaat-gttaatccagttcggtccaacaatgatctactctnnnnnnna- 361  Q
    ||||| ||||||||||||||||||||| ||||||       | |||||||||| || ||| | ||||||||||||||| |||| |||||||       |     
T  43401745 caaaggataaacaagataaagagagtagagaaaaatagacaacaacaccaagagattgttcacccagttcggtccaaccatgacctactctggaggagag 43401844  T
Q  362 -ttgatttctctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaat 459  Q
     || ||||||| ||||||||| |||||||||||| ||||||||||| |||| | |||||||||||||||||||||||||||| | |||||||| ||||||    
T  43401845 attaatttctccaatccactatcaatgagttctt-acaaagagataaaaaatgcgttacaagaaattagcttcaacaagctcacaaagaacaaccctaat 43401943  T
Q  460 ttttatccatttt 472  Q
    || || |||||||    
T  43401944 ttctacccatttt 43401956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 528 - 632
Target Start/End: Complemental strand, 20937585 - 20937481
Alignment:
Q  528 cccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatg 627  Q
    |||||||||||||||||| |||||||||||||| ||||| || |||||||||||||||| |||| || ||||| ||  |||||||||||| | |||||||    
T  20937585 cccaaaagagaaccaacctttatcctttgatttcctaagaatcttctcttttggtctcccaagaatcacccaagtttgtcacaaagactcccttttgatg 20937486  T
Q  628 tgttt 632  Q
    |||||    
T  20937485 tgttt 20937481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 29196430 - 29196580
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaat 459  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||| ||||||||||||||  |||||||| | ||||||||| ||||||    
T  29196430 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttccaagaaattagctttgacaagctcacaaagaacaaaccctaat 29196528  T
Q  460 ttttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    || || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  29196529 ttctacccattttcccaatctc-accaatgaacaagacactcaatgattttca 29196580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 383 - 511
Target Start/End: Complemental strand, 39127650 - 39127522
Alignment:
Q  383 caatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctt 482  Q
    ||||||||| ||||| || |||||||||| |  || ||||||||||||||||||||||| |||||||||||| |||||| ||   |||| ||||||||||    
T  39127650 caatgagttatttacgaaaagatacaaaaaaactataagaaattagcttcaacaagctcaccaagaacaaacataatttatacttatttctcaatctctt 39127551  T
Q  483 tccatgaacaagacactcaatgattttca 511  Q
      |||||| ||||| ||||||||||||||    
T  39127550 ctcatgaataagacgctcaatgattttca 39127522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 361 - 461
Target Start/End: Complemental strand, 46173481 - 46173382
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||| ||||| ||||||||||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||    
T  46173481 attgatctctccaatccactatcaatgaattctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatt 46173383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 361 - 461
Target Start/End: Complemental strand, 54593828 - 54593729
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||| | |||||||| |||||||    
T  54593828 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaataaattagcttcaacaagctcacaaagaacaaccctaatt 54593730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 472
Target Start/End: Original strand, 19683933 - 19684043
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||    
T  19683933 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatt 19684031  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  19684032 tctacccatttt 19684043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 5258195 - 5258338
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| ||||||||||||  |||||||||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || ||    
T  5258195 tctccaatccactatcaatgagttcttc-caaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccc 5258293  T
Q  468 attttt--caatctctttccatgaacaagacactcaatgattttca 511  Q
     |||||  |||||||   | ||||||||||||||||||||||||||    
T  5258294 ttttttcccaatctc-accaatgaacaagacactcaatgattttca 5258338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 361 - 471
Target Start/End: Complemental strand, 9581406 - 9581297
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| |||||| |||||||| | |||| ||||||||||||| ||||||||| | ||||||||||||||||    
T  9581406 attgatctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttaaaagaaattagcttaaacaagctcacaaagaacaaacctaatt 9581308  T
Q  461 tttatccattt 471  Q
    | || ||||||    
T  9581307 tctacccattt 9581297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 377 - 466
Target Start/End: Original strand, 25491027 - 25491116
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatc 466  Q
    ||||| |||||| |||||||||||||||||||||||   || ||||||| ||||||||||||||||| ||||||||||||||||| ||||    
T  25491027 cactatcaatgatttctttacaaagagatacaaaaggagtataagaaatcagcttcaacaagctctcaaagaacaaacctaatttctatc 25491116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 361 - 453
Target Start/End: Complemental strand, 33191955 - 33191865
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa 453  Q
    |||||| |||||||||||||| |||||||||||||||||||| ||  ||||  |||||||||| ||||||||||||||||||| |||||||||    
T  33191955 attgatctctctaatccactatcaatgagttctttacaaagacat--aaaatggttacaagaacttagcttcaacaagctctctaagaacaaa 33191865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 270 - 461
Target Start/End: Complemental strand, 36019068 - 36018877
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnnattgat 366  Q
    ||||| ||||||||||||||||||||| | |||| ||||||   |||| ||||||| |||||||||||||||||||  ||  |||         |||||     
T  36019068 caaaggataaacaagataaagagagtagaaaaaagataacaacaccaaaaaatgttcatccagttcggtccaacaaacat--actgggggagagattgac 36018971  T
Q  367 ttctctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
     |||| |||||||||  ||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||| | |||||||| ||||||||    
T  36018970 ctctccaatccactat-aatgagttctt-acaaagagatacaaaatgagttacaagaaattaacttcaacaagctcacaaagaacaaccctaattt 36018877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 368 - 472
Target Start/End: Original strand, 49199520 - 49199624
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatc 466  Q
    |||| ||||||||| |||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||| | |||||||| | |||||| || |    
T  49199520 tctccaatccactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccttaatttctacc 49199618  T
Q  467 catttt 472  Q
    ||||||    
T  49199619 catttt 49199624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 365 - 481
Target Start/End: Original strand, 54739001 - 54739117
Alignment:
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaac-ctaattttt 463  Q
    ||||||| ||||||||| |||||||||||||||| ||||||| ||||||||||| | ||||||| |||||||||||| | |||||||||| ||||||| |    
T  54739001 atttctccaatccactatcaatgagttctttacagagagatataaaagagttac-ataaattagtttcaacaagctcacaaagaacaaacactaatttct 54739099  T
Q  464 atccatttttcaatctct 481  Q
    | |  |||||||||||||    
T  54739100 accattttttcaatctct 54739117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 276 - 461
Target Start/End: Original strand, 6095554 - 6095742
Alignment:
Q  276 ataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgatttct 370  Q
    ||||||||||||||||||||| |||||| ||||||   |||||||||||| |  ||||||||||||||  ||| |||||||       |  ||||| |||    
T  6095554 ataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacacagttcggtccaact-tgacctactctggaggagagattgatctct 6095652  T
Q  371 ctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    | ||||||||| |||||||||||| ||||||||||||||| | |||||||||||||| |||||| ||| |  | |||||||| ||||||||    
T  6095653 ccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattaacttcaagaagtttacaaagaacaaccctaattt 6095742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 361 - 461
Target Start/End: Complemental strand, 29810992 - 29810893
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| || | ||||||||  ||||||    
T  29810992 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaactctaatt 29810894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 16499153 - 16499005
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||| ||| | || |||||||||||||||||||||||| | ||| ||||| |||||||    
T  16499153 attgatctctccaatccactatcaatgagttctt-acaaagagatataaatgggtaacaagaaattagcttcaacaagct-tacaaaaacaaccctaatt 16499056  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | ||||| ||||  |||||||     ||||||||||||||||||||||||||    
T  16499055 tctatccgttttcccaatctc-acaaatgaacaagacactcaatgattttca 16499005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 29682483 - 29682373
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| |||||| |||||||| | || ||||||||||||||| ||||||||| | |||||||||| |||||    
T  29682483 attgatctctccaatccactatcaatgagttctt-acaaagggatacaaatgggtgacaagaaattagcttaaacaagctcacaaagaacaaacataatt 29682385  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  29682384 tctacccatttt 29682373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 373 - 511
Target Start/End: Complemental strand, 37408570 - 37408433
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 472  Q
    ||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || || ||||    
T  37408570 aatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttt 37408472  T
Q  473 -tcaatctctttccatgaacaagacactcaatgattttca 511  Q
      |||||||   | |||||||||||||||||| |||||||    
T  37408471 cccaatctc-accaatgaacaagacactcaataattttca 37408433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 5260374 - 5260517
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| ||||||||||||  |||||||||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || ||    
T  5260374 tctccaatccactatcaatgagttcttc-caaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccc 5260472  T
Q  468 attttt--caatctctttccatgaacaagacactcaatgattttca 511  Q
     |||||  |||||||   | |||| |||||||||||||||||||||    
T  5260473 ttttttcccaatctc-accaatgaccaagacactcaatgattttca 5260517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 9666517 - 9666660
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatc 466  Q
    |||| ||||||||| ||| || ||||| |||||||| || ||| |||||||||||||||||||||||||||||| | |||||| ||| ||||||| || |    
T  9666517 tctccaatccactatcaaagaattctt-acaaagaggtataaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaatctaatttctacc 9666615  T
Q  467 cattttt-caatctctttccatgaacaagacactcaatgattttca 511  Q
    ||||||| |||||||     ||||||||||||||||||||||||||    
T  9666616 catttttccaatctc-acaaatgaacaagacactcaatgattttca 9666660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 361 - 474
Target Start/End: Complemental strand, 29813187 - 29813075
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| |||||||||  ||||||||||| |||||||||| |||| | ||||||||||||||||||||||||| || | |||||||| |||||||    
T  29813187 attgatctctccaatccactataaatgagttctt-acaaagagatgcaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 29813089  T
Q  461 tttatccatttttc 474  Q
    | || | |||||||    
T  29813088 tctacctatttttc 29813075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 34491154 - 34491057
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  34491154 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 34491057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 368 - 472
Target Start/End: Original strand, 43403795 - 43403899
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatc 466  Q
    |||| ||||||||| |||||||||||| ||||||||||| || | |||||||||||||| ||||||||||||||| | |||||||| |||||||| || |    
T  43403795 tctccaatccactatcaatgagttctt-acaaagagataaaacatgagttacaagaaatgagcttcaacaagctcacaaagaacaagcctaatttctacc 43403893  T
Q  467 catttt 472  Q
    ||||||    
T  43403894 catttt 43403899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 389 - 511
Target Start/End: Original strand, 5433947 - 5434071
Alignment:
Q  389 gttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccatttt---tcaatctctttc 484  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||||||| | ||||||||| |||||||| || |||||||    |||||||   |    
T  5433947 gttctttacaaagagatataaaagggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttcta-ccattttctcccaatctc-acc 5434044  T
Q  485 catgaacaagacactcaatgattttca 511  Q
     ||||||||||||||||||||||||||    
T  5434045 aatgaacaagacactcaatgattttca 5434071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 377 - 461
Target Start/End: Complemental strand, 24635366 - 24635282
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||| |||||| ||  ||| |||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  24635366 cactatcaatgaattgattataaagagatacaaaatagttacaaaaaattagcttcaacaaactctccaagaacaaacttaattt 24635282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 373 - 473
Target Start/End: Original strand, 32744492 - 32744590
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 472  Q
    ||||||||| ||| |||||||| |||||| |||||||| |||||||||||||||||||| ||||||||| | ||||||||| ||||||| || |||||||    
T  32744492 aatccactatcaaagagttctt-acaaagtgatacaaatgagttacaagaaattagcttaaacaagctcacaaagaacaaa-ctaatttctacccatttt 32744589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 270 - 472
Target Start/End: Original strand, 41819470 - 41819677
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatat----aacaccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--tt 363  Q
    ||||| |||||||||||||||| |||| |||||| |     |||||||| ||||||| | |||||| ||||||||||||| |||||||       |  ||    
T  41819470 caaaggataaacaagataaagaaagtagagaaaaaaataacaacaccaataaatgttcacccagtttggtccaacaatgacctactctggaggagagatt 41819569  T
Q  364 gatttctctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttt 462  Q
    ||| |||| |||||||||  ||||||||||| |||||||||||||||| | ||||||||||||||||||  |||||||| | || ||||| ||||||||     
T  41819570 gatgtctccaatccactat-aatgagttctt-acaaagagatacaaaatgggttacaagaaattagcttagacaagctcacaaaaaacaaccctaatttc 41819667  T
Q  463 tatccatttt 472  Q
    || |||||||    
T  41819668 tacccatttt 41819677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 23200189 - 23200330
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||| ||||| |||||||||||| ||||| ||||||||||| ||||||||||||||||||  ||||| || | ||||||||  ||||||| || ||    
T  23200189 tctccaattcactatcaatgagttctt-acaaaaagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaactctaatttcta-cc 23200286  T
Q  468 atttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    |||||||    |||  ||| ||||||||||||||||||||||||    
T  23200287 atttttcccaatctcaccaagaacaagacactcaatgattttca 23200330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 384 - 505
Target Start/End: Complemental strand, 1683577 - 1683457
Alignment:
Q  384 aatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctt 482  Q
    ||||||||||||||||||||||  ||||  | |||||||||||||| |||| |||||||| |||||| ||| |||||| || ||||||| ||||||| ||    
T  1683577 aatgagttctttacaaagagattaaaaac-gatacaagaaattagcatcaataagctctcgaagaacgaacttaatttcta-ccattttctcaatctatt 1683480  T
Q  483 tccatgaacaagacactcaatga 505  Q
    ||||||||||||| |||| ||||    
T  1683479 tccatgaacaagagactcgatga 1683457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 6095826 - 6095952
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 613  Q
    |||||||||| ||||||||||||||||||| ||| | ||||||||  |||||||| |||||||||||| ||  ||||||| ||||| ||||||||||| |    
T  6095826 tagaatctaacccccaaaagagaaccaacctttagcatttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatg 6095925  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  6095926 actctccactcatgtgtttcccaaccc 6095952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 612
Target Start/End: Original strand, 49199697 - 49199795
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactc-gcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||| ||  |||||||  ||||| |||||||||||    
T  49199697 tagaatctaacccccaaaagagaaccaaccattagcctttgatttcactaaggatcttctcttttggtttcacaagactcaacccaagttgctcacaaa 49199795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 527 - 608
Target Start/End: Complemental strand, 1683417 - 1683336
Alignment:
Q  527 ccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctca 608  Q
    |||||||||| |||||||| ||| ||||||||||||||||||| |||||||||||||||  ||||||| || || |||||||    
T  1683417 ccccaaaagataaccaacccttagcctttgattttctaaggatcttctcttttggtctcacaagactcaccaaagttgctca 1683336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 30236066 - 30235969
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||| ||||| |||| |||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  30236066 tagaatctaacccccaaaagagaaccaatcattagccttcgatttcactaaggatcttctcttttggtttcacaagactcacccaacttgctcacaaa 30235969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 384 - 452
Target Start/End: Original strand, 31340268 - 31340335
Alignment:
Q  384 aatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaa 452  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||    
T  31340268 aatgagttctt-acaaagagatacaaatgagttacatgaaattagcttcaacaagctcacaaagaacaa 31340335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 516 - 634
Target Start/End: Complemental strand, 36018792 - 36018672
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 613  Q
    |||||||||| ||||||||||||||||| |  || ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| ||||||||||| |    
T  36018792 tagaatctaaaccccaaaagagaaccaatccatagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatg 36018693  T
Q  614 actctcatttgatgtgtttcc 634  Q
    ||||||  || ||||||||||    
T  36018692 actctccattcatgtgtttcc 36018672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 516 - 644
Target Start/End: Complemental strand, 46860413 - 46860282
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccat--tatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa- 612  Q
    |||||||||| ||||||||||||||||||| |  ||  ||||||||| |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||     
T  46860413 tagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaat 46860314  T
Q  613 gactctcatttgatgtgtttccaaaccctatg 644  Q
    |||||||   | |||||||||| | |||||||    
T  46860313 gactctccactcatgtgtttcccatccctatg 46860282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 361 - 480
Target Start/End: Complemental strand, 47304375 - 47304256
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| || |||||||||| | | ||||||||| |||| ||||||||||||| | |||||||| | |||||    
T  47304375 attgatctctccaatccactatcaatgagttctt-acgaagagatacagatgggttacaagatattaacttcaacaagctcacaaagaacaaccataatt 47304277  T
Q  461 tttatccatttt-tcaatctc 480  Q
    | || ||||||| ||||||||    
T  47304276 tctacccattttctcaatctc 47304256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 23197990 - 23198131
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||| ||||| |||||||||||| ||||| ||||||||||| ||||||||||||||||||  ||||| || | || |||||  ||||||| || ||    
T  23197990 tctccaattcactatcaatgagttctt-acaaaaagatacaaaagggttacaagaaattagctttgacaagttcacaaaaaacaactctaatttcta-cc 23198087  T
Q  468 atttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    |||||||    |||  ||| ||||||||||||||||||||||||    
T  23198088 atttttcccaatctcaccaagaacaagacactcaatgattttca 23198131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 519 - 594
Target Start/End: Original strand, 26323306 - 26323381
Alignment:
Q  519 aatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactc 594  Q
    ||||||| || |||||||||||||||| ||| | |||||||| ||||||||||||| ||||||||||| |||||||    
T  26323306 aatctaaccctcaaaagagaaccaacccttagcttttgatttcctaaggatattcttttttggtctcccaagactc 26323381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 505
Target Start/End: Complemental strand, 2020242 - 2020129
Alignment:
Q  383 caatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctt 482  Q
    |||||||||||||||||||| ||||||||  |||| ||||||||||||||||         |||||||||| |||| || || |||||| ||||||||||    
T  2020242 caatgagttctttacaaagaaatacaaaacggttataagaaattagcttcaa---------caagaacaaatctaacttctacccatttctcaatctctt 2020152  T
Q  483 tccatgaacaagacactcaatga 505  Q
     |||| ||||||| |||||||||    
T  2020151 cccataaacaagagactcaatga 2020129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 9636177 - 9636320
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| |||||||||||| ||||| ||||||||||| ||||||||||||||| ||  ||||| || | |||||||| |||||||| || ||    
T  9636177 tctccaatccactatcaatgagttctt-acaaaaagatacaaaagggttacaagaaattagttttgacaagttcacaaagaacaaccctaatttctaccc 9636275  T
Q  468 attttt--caatctctttccatgaacaagacactcaatgattttca 511  Q
     ||| |  |||||||   | |||| |||||||||||||||||||||    
T  9636276 ttttctcccaatctc-accaatgaccaagacactcaatgattttca 9636320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 40913280 - 40913154
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 613  Q
    |||||||||| ||||||||||||||||||| ||| ||||| ||||  |||||||| |||||||||| | ||  ||||||| ||||| ||||||||||| |    
T  40913280 tagaatctaacccccaaaagagaaccaacccttaacctttaatttcactaaggatcttctcttttgctttcacaagactcacccaatttgctcacaaatg 40913181  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  40913180 actctccactcatgtgtttcccaaccc 40913154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 270 - 425
Target Start/End: Original strand, 55301920 - 55302079
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatat---aacaccaagaaatgttaatccagttcggtccaacaatgatctactct--nnnnnnnattg 364  Q
    ||||| ||||||||||||||||||||| |||||| ||   ||||| |||||||||| | | |||||||||||||||||| ||||| |         ||||    
T  55301920 caaaggataaacaagataaagagagtaaagaaaagataacaacactaagaaatgttcaccaagttcggtccaacaatgacctactatggaggagagattg 55302019  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaat 425  Q
    || |||| ||||||||| |||||| ||| |||||||||||||||||   ||||||||||||    
T  55302020 atctctccaatccactatcaatgaattc-ttacaaagagatacaaataggttacaagaaat 55302079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 47304192 - 47304067
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaaga 614  Q
    |||||||||| ||||||||||||||||||| |||   ||||||||  ||||||||||||||||||||| |   ||||||| || || ||||||||||| |    
T  47304192 tagaatctaacccccaaaagagaaccaacccttagtttttgatttcactaaggatattctcttttggttttacaagactcacctaagttgctcacaaaaa 47304093  T
Q  615 ctctcatttgatgtgtttccaaaccc 640  Q
    |||||   | |||||||||| |||||    
T  47304092 ctctccactcatgtgtttcccaaccc 47304067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 397 - 461
Target Start/End: Original strand, 50432733 - 50432797
Alignment:
Q  397 caaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||||||||||||||| || |||||||||| |||||||| ||||||||||| || |||||||||    
T  50432733 caaagagatacaaaagatttgcaagaaattaacttcaacacgctctccaagagcagacctaattt 50432797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 378 - 437
Target Start/End: Original strand, 40519258 - 40519316
Alignment:
Q  378 actaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaa 437  Q
    |||| ||||||||||||||||||||||||||||| | ||||||||||||| |||||||||    
T  40519258 actatcaatgagttctttacaaagagatacaaaata-ttacaagaaattaacttcaacaa 40519316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 393 - 511
Target Start/End: Complemental strand, 40612701 - 40612582
Alignment:
Q  393 tttacaaagagatacaaaagagttacaagaaattagctt-caacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaac 491  Q
    |||||||||||||||||||    || || ||||| |||| ||| || |||| |||||||||| |||||||||| |||| |  |||| ||||| |||||||    
T  40612701 tttacaaagagatacaaaattaataaaaaaaattggctttcaataaactcttcaagaacaaatctaatttttacccatctcacaatatcttttcatgaac 40612602  T
Q  492 aagacactcaatgattttca 511  Q
    |||| |||||||||||||||    
T  40612601 aagagactcaatgattttca 40612582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 393 - 511
Target Start/End: Complemental strand, 40612905 - 40612786
Alignment:
Q  393 tttacaaagagatacaaaagagttacaagaaattagctt-caacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaac 491  Q
    |||||||||||||||||||    || || ||||| |||| ||| || |||| |||||||||| |||||||||| |||| |  |||| ||||| |||||||    
T  40612905 tttacaaagagatacaaaattaataaaaaaaattggctttcaataaactcttcaagaacaaatctaatttttacccatctcacaatatcttttcatgaac 40612806  T
Q  492 aagacactcaatgattttca 511  Q
    |||| |||||||||||||||    
T  40612805 aagagactcaatgattttca 40612786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 377 - 448
Target Start/End: Complemental strand, 41510371 - 41510300
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaaga 448  Q
    ||||| |||| |||| |||| ||| ||||||||| ||||||||||||||||||||||||| | |||||||||    
T  41510371 cactatcaattagttatttataaaaagatacaaacgagttacaagaaattagcttcaacatgttctccaaga 41510300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 4569892 - 4569766
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 613  Q
    |||||||||| | ||||||||||||||||| ||| ||||||||||  |||| |||  ||||||||||| ||  ||||||| ||||| |||||||| ||||    
T  4569892 tagaatctaaccaccaaaagagaaccaacccttagcctttgatttcactaaagatcatctcttttggtttcacaagactcacccaagttgctcacaaaag 4569793  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  4569792 actctccactcatgtgtttcccaaccc 4569766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 519 - 640
Target Start/End: Original strand, 5434108 - 5434230
Alignment:
Q  519 aatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaagactc 617  Q
    ||||||| ||||||||||||| ||| | |||  ||||||||   ||||||| |||||||||||| ||| ||||||| ||||| |||||||| ||||||||    
T  5434108 aatctaacccccaaaagagaatcaatctttagtctttgattacataaggatcttctcttttggtttcccaagactcacccaacttgctcacaaaagactc 5434207  T
Q  618 tcatttgatgtgtttccaaaccc 640  Q
    ||   | |||||||||| |||||    
T  5434208 tccactcatgtgtttcctaaccc 5434230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 361 - 427
Target Start/End: Complemental strand, 40913417 - 40913352
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaatta 427  Q
    |||||| |||| ||||||||| | |||||||||| ||||||||||||||| ||||||||||||||||    
T  40913417 attgatctctccaatccactatcgatgagttctt-acaaagagatacaaatgagttacaagaaatta 40913352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 464
Target Start/End: Original strand, 54744305 - 54744396
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattag-cttcaacaagctctccaagaacaaacc-taattttta 464  Q
    ||||||||| || | |||||||||||||||||||||||  |||||||| ||||||| ||||||| ||||||||||||  ||||| |||||||||    
T  54744305 aatccactatcagtaagttctttacaaagagatacaaa--agttacaataaattagccttcaactagctctccaagaggaaaccttaattttta 54744396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 219 - 303
Target Start/End: Complemental strand, 20937926 - 20937844
Alignment:
Q  219 atctagatataatctaaaaatcaagtttaaagtaaaaccacaatagaatatcaaagaataaacaagataaagagagtatagaaaa 303  Q
    |||||||| |||||||  |||||||| |||||||||| |||||| |||   |||| |||||||||||||||||||||| ||||||    
T  20937926 atctagatctaatctattaatcaagtgtaaagtaaaatcacaatcgaac--caaataataaacaagataaagagagtagagaaaa 20937844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 495
Target Start/End: Original strand, 4075516 - 4075651
Alignment:
Q  363 tgatttctctaatccactaccaatgagttctttacaaagagatacaaaaga-gttacaagaaattagcttcaacaagctctccaagaacaaac--ctaat 459  Q
    |||| |||| ||||||||| ||| |||||  |||||||| ||||||||||| |||||||||||||| |||  ||||| |||| |||||||  |   ||||    
T  4075516 tgatctctccaatccactatcaaagagtttcttacaaagtgatacaaaagaggttacaagaaattaacttttacaagttctctaagaacagcctaataat 4075615  T
Q  460 ttttatccatttttcaatctctttccatgaacaaga 495  Q
    || || ||||||  ||||||||||| ||||||||||    
T  4075616 ttctacccatttcccaatctctttctatgaacaaga 4075651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 373 - 461
Target Start/End: Original strand, 23391965 - 23392052
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||||||| ||| ||||||||  ||||| |||||||| | |||||||||||||| ||| ||||||||| | |||||||||| ||||||    
T  23391965 aatccactatcaaagagttcttg-caaagtgatacaaatgggttacaagaaattatcttaaacaagctcacaaagaacaaacttaattt 23392052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 557 - 632
Target Start/End: Original strand, 35138975 - 35139050
Alignment:
Q  557 attttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtgttt 632  Q
    |||| |||||||| |||| ||||||||||| |||||||   ||| ||||||| ||||||||||||||||| |||||    
T  35138975 atttcctaaggatcttctattttggtctcccaagactcattcaagttgctcataaagactctcatttgatttgttt 35139050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 530 - 585
Target Start/End: Complemental strand, 39127473 - 39127418
Alignment:
Q  530 caaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctc 585  Q
    ||||||||||| |||| ||| |||||||||| |||||| |||||||||||||||||    
T  39127473 caaaagagaactaacccttagcctttgatttcctaagggtattctcttttggtctc 39127418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 801209 - 801115
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatac-aaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||| ||||||||| ||||||||||||   |||||||||| ||||||||||||||||||||| ||  ||||| || | | |||||| ||||||||    
T  801209 tctccaatccactatcaatgagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttcacaatgaacaaccctaattt 801115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 511
Target Start/End: Original strand, 23410405 - 23410522
Alignment:
Q  394 ttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-aatctctttccatgaaca 492  Q
    |||||||| |||||||| | |||| | ||||||||||| ||||||||| | ||||| |||| |||||| || ||||||| | ||| ||  |  |||||||    
T  23410405 ttacaaagtgatacaaatgggttatacgaaattagcttaaacaagctcacaaagaataaacataatttctacccattttccaaatttcact-aatgaaca 23410503  T
Q  493 agacactcaatgattttca 511  Q
    |||||||||||||||||||    
T  23410504 agacactcaatgattttca 23410522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 505
Target Start/End: Original strand, 37761548 - 37761658
Alignment:
Q  397 caaagagata-caaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc-taatttttatccatttttcaatctctttccatgaacaag 494  Q
    |||||||||| |||||| ||||||| ||||||| || ||||||| | | ||||||||||| ||||||||| |  ||| ||| |||||||||| |||||||    
T  37761548 caaagagatatcaaaagggttacaataaattagttttaacaagcccacaaagaacaaaccttaatttttacctttttctcattctctttccaagaacaag 37761647  T
Q  495 acactcaatga 505  Q
    | ||| |||||    
T  37761648 agacttaatga 37761658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 7780055 - 7780147
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||| ||||||||| ||||||||||||   ||||||||||||||| ||||||||||||||| ||  ||||| || | | |||||| ||||||||    
T  7780055 tctccaatccactatcaatgagttcttacaaaagagatacaaaag-gttacaagaaattagatttgacaagttcacaatgaacaaccctaattt 7780147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 54593645 - 54593549
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||| ||||| ||| ||||||||||  |||||||| |||| ||||||| ||  ||||||| | ||| |||||||||||    
T  54593645 tagaatctaacccccaaaagagaa-caacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaagttgctcacaaa 54593549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 516 - 612
Target Start/End: Original strand, 41819751 - 41819846
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| | | ||||||||||||||| ||| | ||||||||  ||| ||| |||||||||||| || |||||||| | ||| |||||||||||    
T  41819751 tagaatctaaccgctaaaagagaaccaacccttagc-tttgatttcataaagatcttctcttttggtttcataagactcactcaagttgctcacaaa 41819846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 530 - 612
Target Start/End: Original strand, 55302206 - 55302289
Alignment:
Q  530 caaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    ||||||||||||||||  || ||||||||||  |||||||| |||||||||||| ||  ||||||| | ||| |||||||||||    
T  55302206 caaaagagaaccaacccctagcctttgatttcactaaggatcttctcttttggtttcacaagactcactcaagttgctcacaaa 55302289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 380 - 461
Target Start/End: Original strand, 42960723 - 42960803
Alignment:
Q  380 taccaatgagttctttacaaagaga-tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||||||| || |||||||||| | ||||||| ||||||||||||||| ||||||||| |||| ||||||||| | ||||||    
T  42960723 taccaatgatttttttacaaagataatacaaaatagttacaagaaatta-cttcaacaaactct-caagaacaaccgtaattt 42960803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 303
Target Start/End: Complemental strand, 5270641 - 5270559
Alignment:
Q  219 atctagatataatctaaaaatcaagtttaaagtaaaaccacaatagaatatcaaagaataaacaagataaagagagtatagaaaa 303  Q
    |||||||| |||||||  || ||||| ||| | ||||||||||| |||   ||||||||||||| ||||||||||||| ||||||    
T  5270641 atctagatctaatctagcaaccaagtgtaatgcaaaaccacaatcgaac--caaagaataaacatgataaagagagtagagaaaa 5270559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 596 - 633
Target Start/End: Original strand, 26323821 - 26323858
Alignment:
Q  596 cccaaattgctcacaaagactctcatttgatgtgtttc 633  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  26323821 cccaagttgctcacaaagactctcctttgatgtgtttc 26323858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 353
Target Start/End: Original strand, 26323027 - 26323105
Alignment:
Q  279 aacaagataaagagagtatagaaaa---tataacacc-aagaaatgttaatccagttcggtccaacaatgatctactct 353  Q
    |||||||||||||||||| ||||||    |||||||| ||||| |||| | ||| |||||||||||||||| |||||||    
T  26323027 aacaagataaagagagtagagaaaagagaataacaccaaagaattgtttacccacttcggtccaacaatgacctactct 26323105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 441
Target Start/End: Original strand, 28253346 - 28253390
Alignment:
Q  397 caaagagatacaaaagagttacaagaaattagcttcaacaagctc 441  Q
    |||||| ||||||||  |||||||||||||| |||||||||||||    
T  28253346 caaagaaatacaaaatcgttacaagaaattaacttcaacaagctc 28253390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 1e-45; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 271 - 511
Target Start/End: Complemental strand, 33648391 - 33648145
Alignment:
Q  271 aaagaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttga 365  Q
    |||||||||||||||||||||||||| |||||| | ||||   |||| ||||||| | |||||||||||||||||||| |||||||       |  ||||    
T  33648391 aaagaataaacaagataaagagagtagagaaaagacaacaacaccaataaatgtttacccagttcggtccaacaatgacctactctggaggagagattga 33648292  T
Q  366 tttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaattttta 464  Q
    | |||| ||||| ||| |||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||| | ||||||||| |||||||||||    
T  33648291 tctctccaatccgctatcaatgagttctttacaaagaaatacaaaagggttacaggaaattagcttcaacaagctcacaaagaacaaaccctaattttta 33648192  T
Q  465 tccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
     ||||||| |||||||| |  |||| |||||||||||||| |||||||    
T  33648191 -ccattttctcaatctcctctcatgtacaagacactcaattattttca 33648145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 270 - 508
Target Start/End: Original strand, 30217993 - 30218235
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatata---acaccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnn--attg 364  Q
    ||||||||||||||||||||||||||| |||||| | |   ||||||| ||||||| | | ||||| ||||||||||||  ||||||         ||||    
T  30217993 caaagaataaacaagataaagagagtagagaaaa-agagctacaccaaaaaatgtttaccgagttcagtccaacaatgacttactctgggggagtgattg 30218091  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttta 464  Q
    || | |  || |||||| |||||| || |||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||| || ||    
T  30218092 atcttttcaacccactatcaatgaattatttacaaagagatacaaaatggttacaagaaattagcttcaataagctctccaagaacaaacctaacttcta 30218191  T
Q  465 tccatttttcaatctctttccatgaacaagacactcaatgattt 508  Q
     |||||| |||||||| |||||||||||||||||||||||||||    
T  30218192 cccatttctcaatctccttccatgaacaagacactcaatgattt 30218235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 17057413 - 17057562
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||  | |||||||| |||||||    
T  17057413 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaaaaaattagcttcaacaagcttgcaaagaacaaccctaatt 17057511  T
Q  461 tttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||||| ||||||   | ||||||||||||||||||||||||||    
T  17057512 tctacccatttttccaatctcac-caatgaacaagacactcaatgattttca 17057562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 17085396 - 17085545
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||  | |||||||| |||||||    
T  17085396 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaaaaaattagcttcaacaagcttgcaaagaacaaccctaatt 17085494  T
Q  461 tttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||||| ||||||   | ||||||||||||||||||||||||||    
T  17085495 tctacccatttttccaatctcac-caatgaacaagacactcaatgattttca 17085545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 377 - 461
Target Start/End: Original strand, 42261545 - 42261629
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42261545 cactatcaatgagtactttacaaagatatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacttaattt 42261629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 1631776 - 1631924
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||| |||||||||||||||||| | |||||||| |||||||    
T  1631776 attgatttctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagatattagcttcaacaagctcacaaagaacaatcctaatt 1631874  T
Q  461 tttatccattttt-caatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||| |||||||   | ||||||||||||||| ||||||||||    
T  1631875 tctacccatttttccaatctc-accaatgaacaagacactc-atgattttca 1631924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 2334462 - 2334611
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| || | |||||||| ||| |||    
T  2334462 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttactagaaattagcttcaacaagttcacaaagaacaacccttatt 2334560  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  2334561 tctacccattttcccaatctc-accaatgaacaagacactcaatgattttca 2334611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 361 - 456
Target Start/End: Complemental strand, 24398182 - 24398087
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacct 456  Q
    |||||| |||| |||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||    
T  24398182 attgatctctccaatccattatcaatgagttctttacaaagagatacaaaagggttacaagaaattagcttcaacaagctcacaaagaacaaacct 24398087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 36318053 - 36318202
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||| ||||||| |||||||||||| | |||||||| |||||||    
T  36318053 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaataaattagtttcaacaagctcacaaagaacaaccctaatt 36318151  T
Q  461 tttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||||| ||||||   | ||||||||||||||||||||||||||    
T  36318152 tctacccatttttccaatctcac-caatgaacaagacactcaatgattttca 36318202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 36773686 - 36773537
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | |||||||| |||||||    
T  36773686 attgatctctccaatccactatcaaagagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatt 36773588  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | |  |||||||  |||||||   | ||||||||||||||||||||||||||    
T  36773587 tattcccattttcccaatctc-accaatgaacaagacactcaatgattttca 36773537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 361 - 513
Target Start/End: Original strand, 33162494 - 33162645
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||||||||||||| |||||||||||| ||| ||||||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||    
T  33162494 attgatctctctaatccactatcaatgagttctt-acagagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatt 33162592  T
Q  461 tttatccatttttc-aatctctttccatgaacaagacactcaatgattttcaat 513  Q
    | || ||||||| | ||| ||   | ||||||||||||||| ||||||||||||    
T  33162593 tctacccattttcctaatttc-accaatgaacaagacactcgatgattttcaat 33162645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 377 - 505
Target Start/End: Complemental strand, 41454343 - 41454215
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-a 475  Q
    ||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||||||||||||| || |||||| ||||||| || ||||||||| |    
T  41454343 cactatcaatgagttctttacaaatatatacaaaagagttgctagaaattagcttcaacaagctctcaaaaaacaaatctaatttcta-ccatttttcga 41454245  T
Q  476 atctctttccatgaacaagacactcaatga 505  Q
    |||| ||||||||| ||||| |||||||||    
T  41454244 atctttttccatgatcaagatactcaatga 41454215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 723788 - 723937
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| |||||| |||||||| | |||||||||||||||||| ||||||||| | ||||||||||||||||    
T  723788 attgatctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatt 723886  T
Q  461 tttatcca-tttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||| |||| |||||||     ||||||||||||||||||||||||||    
T  723887 tctacccagttttccaatctc-acaaatgaacaagacactcaatgattttca 723937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 5723300 - 5723448
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||||  ||||||||||||||||||  ||||| || | |||||||| |||||||    
T  5723300 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaaaggttacaagaaattagctttgacaagttcacaaagaacaagcctaatt 5723398  T
Q  461 tttatccatttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || || ||| ||||||||   | ||||||||||||||||||||||||||    
T  5723399 tctacccttttctcaatctc-accaatgaacaagacactcaatgattttca 5723448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 270 - 461
Target Start/End: Original strand, 35446833 - 35447027
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnnat--tg 364  Q
    ||||| ||||||||||||||||||||| |||||| ||||||   |||||||||||| | |||||||||||||||  ||| |||||||       |   ||    
T  35446833 caaagcataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctggaggagagagtg 35446931  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    || |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||| ||||||||| || | |||||||| ||||||||    
T  35446932 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagattcaacaagatcacaaagaacaaccctaattt 35447027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 4503184 - 4503326
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||  ||||| || | |||||||| |||||||| || ||    
T  4503184 tctccaatccactatcaatgagttctt--caaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaaccctaatttcta-cc 4503280  T
Q  468 attttt---caatctctttccatgaacaagacactcaatgattttca 511  Q
    ||||||   ||||||| | | ||||||||||||||||||||||||||    
T  4503281 attttttcccaatctc-tccaatgaacaagacactcaatgattttca 4503326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 383 - 511
Target Start/End: Original strand, 7597076 - 7597205
Alignment:
Q  383 caatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatccatttttcaatctct 481  Q
    |||||||||||||||||| |||||||||||| |||||||||||||| ||| ||||| ||   | |||| ||||||||||| ||| ||||| |||||||||    
T  7597076 caatgagttctttacaaaaagatacaaaagacttacaagaaattagtttcgacaagttcataaggaacaaaacctaatttctattcatttctcaatctct 7597175  T
Q  482 ttccatgaacaagacactcaatgattttca 511  Q
    | |||||||||||||||| | |||||||||    
T  7597176 tcccatgaacaagacactgagtgattttca 7597205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 42362469 - 42362327
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| |||||||||||| |||||| |||||||| | |||||||||||||||||| ||||||||| | ||||||||||||||||| || ||    
T  42362469 tctccaatccactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctaccc 42362371  T
Q  468 atttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    |||||  |||||||     ||||||||||||||||||||||||||    
T  42362370 attttcccaatctc-acaaatgaacaagacactcaatgattttca 42362327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 36988120 - 36988269
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||  |||||||| |  ||||||| |||||||    
T  36988120 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagttttgacaagctcacatagaacaaccctaatt 36988218  T
Q  461 tttatccattttt-caatctctttccatgaacaagacactcaatgattttca 511  Q
    | || || ||||| ||||| |   | ||||||||||||||||||||||||||    
T  36988219 tctacccttttttccaatc-ccaccaatgaacaagacactcaatgattttca 36988269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 38312364 - 38312215
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||||||| |||| ||||||||||||||| | ||||||||||||||| ||||||||| || | |||||||| |||||||    
T  38312364 attgatctctccaatccactatcaatgagatctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagttcacaaagaacaaccctaatt 38312266  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  38312265 tctacccattttcccaatctc-accaatgaacaagacactcaatgattttca 38312215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 45099871 - 45099729
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||  ||||| || | |||||||| |||||||| || ||    
T  45099871 tctccaatccactatcaatgagttctt--caaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccc 45099774  T
Q  468 attttt--caatctctttccatgaacaagacactcaatgattttca 511  Q
     |||||  |||||||   | ||||||||||||||||||||||||||    
T  45099773 ttttttcccaatctc-accaatgaacaagacactcaatgattttca 45099729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 29867993 - 29867844
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||| |||||||| ||||||||||||||| | ||||||||||||||||||  ||||| || | |||||||| |||||||    
T  29867993 attgatctctccaatccactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccctaatt 29867895  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  29867894 tctacccattttcccaatctc-accaatgaacaagacactcaatgattttca 29867844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 34139814 - 34139964
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||||||||||||   |||| |||||| | | |||||||||||||||||| ||||||||| | |||||||| |||||||    
T  34139814 attgatctctccaatccactatcaatgagttcttacaaaagggatacatatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatt 34139913  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||| ||||||||     ||||||||||||||||||||||||||    
T  34139914 tctacccattttctcaatctc-acaaatgaacaagacactcaatgattttca 34139964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 45727053 - 45726943
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| |||||||||||||||   |||||||||||||||||||||||||||| | ||||||||  ||||||    
T  45727053 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaactctaatt 45726955  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  45726954 tctacccatttt 45726943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 362 - 511
Target Start/End: Complemental strand, 11690624 - 11690476
Alignment:
Q  362 ttgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||| |||| ||||||||| ||| || ||||| |||||| |||||||| | |||||||||||||||||| ||||||||| | |||||||||||||||||    
T  11690624 ttgatctctccaatccactatcaacgatttctt-acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaattt 11690526  T
Q  462 ttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
     || |||||||  |||||||     ||||||||||||||||||||||||||    
T  11690525 ctacccattttcccaatctc-acaaatgaacaagacactcaatgattttca 11690476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 361 - 508
Target Start/End: Original strand, 42019914 - 42020063
Alignment:
Q  361 attgatttctctaatccactaccaatgagttcttt--acaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaa 458  Q
    |||||| |||| ||| ||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||||| ||||||| |  |||||||||| |||    
T  42019914 attgatctctcaaattcactatcaatgagttttttttacaaagagatacaaaagagttacaagaaattagcttctacaagctttataagaacaaacataa 42020013  T
Q  459 tttttatccatttttcaatctctttccatgaacaagacactcaatgattt 508  Q
     || || || ||||  |||||||| ||| ||| || | ||||||||||||    
T  42020014 attctaccctttttctaatctcttcccaagaaaaatagactcaatgattt 42020063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 373 - 511
Target Start/End: Original strand, 17490204 - 17490335
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 472  Q
    ||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | ||||| ||    ||||| || |||||||    
T  17490204 aatccactatcaatgagttctt-acaaagagttacaaaagagttacaagaaattagcttcaacaagctcacaaagaataa----aatttcta-ccatttt 17490297  T
Q  473 tcaatctctttccatgaacaagacactcaatgattttca 511  Q
     |||||||   | |||||||||||| |||||||||||||    
T  17490298 ccaatctc-aacaatgaacaagacattcaatgattttca 17490335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 361 - 461
Target Start/End: Original strand, 6595050 - 6595149
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||| |||||||| |||||||||| |||||| ||||||||||||||||||||||||| || | |||||||| |||||||    
T  6595050 attgatctctccaatccactatcaacgagttctt-acaaagagattcaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 6595148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 7815324 - 7815395
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagct 440  Q
    |||| |||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7815324 tctccaatccactataaatgagttctt-acaaagagatacaaaagagttacaagaaattagcttcaacaagct 7815395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 377 - 488
Target Start/End: Original strand, 34811281 - 34811393
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-a 475  Q
    ||||| |||||||||  ||||||||||||| ||||||||||||| |||||||||||||||||||||| |||| ||| | |||||| || |  |||||| |    
T  34811281 cactatcaatgagtttcttacaaagagatataaaagagttacaataaattagcttcaacaagctctctaagagcaatcttaatttctaccattttttcaa 34811380  T
Q  476 atctctttccatg 488  Q
    |||||||||||||    
T  34811381 atctctttccatg 34811393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 383 - 511
Target Start/End: Original strand, 36205731 - 36205857
Alignment:
Q  383 caatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt--caatctc 480  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||  ||||| || | |||||||| |||||||| || ||||||||  |||||||    
T  36205731 caatgagttctt--caaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaaccctaatttcta-ccatttttcccaatctc 36205827  T
Q  481 tttccatgaacaagacactcaatgattttca 511  Q
       | ||||||||||||||||||||||||||    
T  36205828 -accaatgaacaagacactcaatgattttca 36205857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 388 - 511
Target Start/End: Complemental strand, 41446237 - 41446113
Alignment:
Q  388 agttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-aatctctttcca 486  Q
    ||||||||| ||||||||||||||| |||||   |||||||||||||||||||||| |||||||||| |||||| || |  |||||| |||||||||||     
T  41446237 agttctttataaagagatacaaaagggttacttaaaattagcttcaacaagctctcaaagaacaaacataatttctacctttttttcgaatctctttccg 41446138  T
Q  487 tgaacaagacactcaatgattttca 511  Q
    |||  ||||  ||||||||||||||    
T  41446137 tgattaagaggctcaatgattttca 41446113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 14633869 - 14634019
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| | ||||||||||   |||| |||||||| | |||||||||||||||||| ||||||||| | |||||||| |||||||    
T  14633869 attgatctctccaatccactatctatgagttcttacaaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaatcctaatt 14633968  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||     ||||||||||||||||||||||||||    
T  14633969 tctacccattttaccaatctc-acaaatgaacaagacactcaatgattttca 14634019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 1631959 - 1632085
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 613  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||| ||||    
T  1631959 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaag 1632058  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  1632059 actctccactcatgtgtttcccaaccc 1632085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 368 - 466
Target Start/End: Complemental strand, 3897108 - 3897010
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatc 466  Q
    |||||||||||||  ||||||||||||||||||   ||||||||||||||||| |||||||||||||| || ||| ||||||||| | |||||| ||||    
T  3897108 tctctaatccactttcaatgagttctttacaaaattatacaaaagagttacaaaaaattagcttcaacgagttcttcaagaacaatcttaatttctatc 3897010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 363 - 480
Target Start/End: Complemental strand, 26353306 - 26353189
Alignment:
Q  363 tgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc-taattt 461  Q
    |||| |||| ||||||||| |||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||| ||| | ||||||||||| ||||||    
T  26353306 tgatctctccaatccactatcaatgagtactt-acaaaaagatacaaaagtgttacaagaaattagcttcaacaaactcacaaagaacaaaccttaattt 26353208  T
Q  462 ttatccatttttcaatctc 480  Q
     ||  | ||||||||||||    
T  26353207 ctacacttttttcaatctc 26353189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 45726870 - 45726744
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 613  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  | ||||| ||||| ||||||||||| |    
T  45726870 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacatgactcacccaagttgctcacaaatg 45726771  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | ||||||||||||||||    
T  45726770 actctccactcatgtgtttccaaaccc 45726744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 553 - 634
Target Start/End: Original strand, 42261875 - 42261956
Alignment:
Q  553 tttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtgtttcc 634  Q
    |||||||| |||| ||||| ||||||||||||| |||||||||||||| ||||||| ||| |||||| ||||||||||||||    
T  42261875 tttgatttcctaatgatatactcttttggtctcgtaagactcgcccaagttgctcataaaaactctcctttgatgtgtttcc 42261956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 364 - 511
Target Start/End: Original strand, 12123631 - 12123777
Alignment:
Q  364 gatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttt 463  Q
    |||||||||  | ||||| || |||||||||||||||  ||||||||||||||||||||||| |||||||||||  ||   ||||||||  ||||||| |    
T  12123631 gatttctctgcttcactatcattgagttctttacaaaatgatacaaaagagttacaagaaataagcttcaacaaaatcataaagaacaactctaatttat 12123730  T
Q  464 atccatttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    |  |||||| ||||||| |   ||||||||||||||| ||||||||||    
T  12123731 actcattttccaatctc-tcaaatgaacaagacactcgatgattttca 12123777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 362 - 472
Target Start/End: Original strand, 11151636 - 11151745
Alignment:
Q  362 ttgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||| |||| ||||||||| | | |||||||| |||||| |||||||| | |||||||||||||||||| ||||||||| | ||||||||| |||||||    
T  11151636 ttgatctctccaatccactatctaagagttctt-acaaagtgatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaatctaattt 11151734  T
Q  462 ttatccatttt 472  Q
     || |||||||    
T  11151735 ctacccatttt 11151745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 42288337 - 42288463
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 613  Q
    |||||||||| ||| ||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||| ||||    
T  42288337 tagaatctaaacccgaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaag 42288436  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  42288437 actctccactcatgtgtttcccaaccc 42288463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 4484381 - 4484474
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||| ||||||||| ||||||||||||   ||||||||||||||| ||||||||||||||||||  ||||| || | |||||||| ||||||||    
T  4484381 tctccaatccactatcaatgagttcttacaaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaattt 4484474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 13121891 - 13121744
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaat 459  Q
    ||||||||||  ||||||||| ||||||||| | |||||||||||||||| |  ||||||||||||| ||||||||||||| | ||||||||| ||||||    
T  13121891 attgatttcttcaatccactatcaatgagtt-tctacaaagagatacaaagg--ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaat 13121795  T
Q  460 ttttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    || || |||||||  || ||||   | ||||||||||||||||||||||||||    
T  13121794 ttcta-ccattttcccagtctc-accaatgaacaagacactcaatgattttca 13121744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 508
Target Start/End: Complemental strand, 30833463 - 30833323
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| ||||||||||||   ||||||||||||||| |||||||||||||| |||  ||||| || | |||||||| |||||||| || ||    
T  30833463 tctccaatccactatcaatgagttcttacaaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaaccctaatttctaccc 30833364  T
Q  468 atttttcaatctctttccatgaacaagacactcaatgattt 508  Q
     ||| ||    |||  ||| |||||||||||||||||||||    
T  30833363 ttttctcccaatctcaccaagaacaagacactcaatgattt 30833323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 361 - 461
Target Start/End: Complemental strand, 32289688 - 32289588
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| ||||||||  |||| ||||||||||||   ||||||||||||||||||||||||||||||| ||  ||||| || | |||||||| |||||||    
T  32289688 attgatctctctaatttactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaaccctaatt 32289589  T
Q  461 t 461  Q
    |    
T  32289588 t 32289588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 361 - 472
Target Start/End: Original strand, 42288154 - 42288264
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| |||||| || ||||||| |||| ||||||| ||||||| | ||||||| |||||||||||||||||||| | |||||||| | |||||    
T  42288154 attgatctctccaatccattatcaatgagctctt-acaaagaaatacaaatgggttacaataaattagcttcaacaagctcacaaagaacaaccttaatt 42288252  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  42288253 tctacccatttt 42288264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 511
Target Start/End: Complemental strand, 24885765 - 24885636
Alignment:
Q  381 accaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctc 480  Q
    |||||||||||||| ||| || | |||||| | |||||||||||||||||| ||||||||| | ||||||||||||||||| ||  |||||| | |  |     
T  24885765 accaatgagttctt-acagaggggtacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctactcattttcccaattt 24885667  T
Q  481 tttccatgaacaagacactcaatgattttca 511  Q
    |    ||||||||||||||||||||||||||    
T  24885666 tacaaatgaacaagacactcaatgattttca 24885636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 35447111 - 35447237
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 613  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  ||||| || |||||||||||| |   ||||||| ||||| |||||||| ||||    
T  35447111 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagtatcttctcttttggttttacaagactcacccaagttgctcacaaaag 35447210  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  35447211 actctccactcatgtgtttcccaaccc 35447237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 373 - 438
Target Start/End: Complemental strand, 7451230 - 7451166
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaag 438  Q
    ||||||||| ||||||||| || ||||||||||||||| || ||||||||||||||||||||||||    
T  7451230 aatccactatcaatgagttatt-acaaagagatacaaatgaattacaagaaattagcttcaacaag 7451166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 377 - 437
Target Start/End: Complemental strand, 4561197 - 4561137
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaa 437  Q
    ||||| |||||| || |||||||||||||||||||  ||||||||||||||||||||||||    
T  4561197 cactaacaatgaattttttacaaagagatacaaaaatgttacaagaaattagcttcaacaa 4561137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 384 - 511
Target Start/End: Complemental strand, 11067406 - 11067280
Alignment:
Q  384 aatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt-caatctctt 482  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||  |||||||| | ||| ||||  ||||||| || |||||||| |||| ||      
T  11067406 aatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagctcacaaagtacaacactaatttctacccatttttccaatttc-a 11067309  T
Q  483 tccatgaacaagacactcaatgattttca 511  Q
     | ||||| ||||||||||||||||||||    
T  11067308 ccaatgaataagacactcaatgattttca 11067280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 422 - 511
Target Start/End: Complemental strand, 17450655 - 17450566
Alignment:
Q  422 aaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 511  Q
    |||||||||||||||||||| | |||||||| |||||| | || ||||||||| ||||||   | ||||||||||||||||||||||||||    
T  17450655 aaattagcttcaacaagctcacaaagaacaagcctaatctctacccatttttcaaatctc-accaatgaacaagacactcaatgattttca 17450566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 373 - 441
Target Start/End: Complemental strand, 11049666 - 11049598
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatac-aaaagagttacaagaaattagcttcaacaagctc 441  Q
    |||| |||| |||||||||||| |||||||||||| ||||| |||| |||||||||||||||||||||||    
T  11049666 aatctactatcaatgagttctt-acaaagagatactaaaagggttataagaaattagcttcaacaagctc 11049598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 408 - 500
Target Start/End: Complemental strand, 36271744 - 36271651
Alignment:
Q  408 aaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctcttt-ccatgaacaagacactc 500  Q
    ||||| ||||||||| |||| |||||||||||| ||||| || ||||||||||||||  ||||| ||||| | ||| |||||||||||| ||||    
T  36271744 aaaagggttacaagatattaacttcaacaagctttccaataaaaaacctaatttttactcatttctcaatttttttcccatgaacaagagactc 36271651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 612
Target Start/End: Complemental strand, 43731076 - 43730992
Alignment:
Q  527 ccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| |||||||| |||  ||||||||| ||| ||||||||| ||||||| ||| |||| || |||||||||||||||||    
T  43731076 ccccaaaaga-aaccaacctttagactttgatttcctacggatattctattttggtttcccaagattcacccaaattgctcacaaa 43730992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 412 - 472
Target Start/End: Original strand, 14202499 - 14202559
Alignment:
Q  412 gagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 472  Q
    |||||||||||||||||||| ||||||||| | |||||||||| |||||| || |||||||    
T  14202499 gagttacaagaaattagcttaaacaagctcacaaagaacaaacataatttctacccatttt 14202559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 611
Target Start/End: Complemental strand, 17450531 - 17450436
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaa 611  Q
    ||||||| || |||||| |||||| ||||| ||| |||||||||| |||| ||| |||||||||||| ||  ||||||| ||||| || |||||||    
T  17450531 tagaatccaacccccaatagagaatcaacccttagcctttgatttcctaatgatcttctcttttggtttcacaagactcacccaagtttctcacaa 17450436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 552 - 612
Target Start/End: Complemental strand, 24397962 - 24397902
Alignment:
Q  552 ctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||| |||||||||||||||||||||||| ||  ||||||  ||||||||| |||||||    
T  24397962 ctttgactttctaaggatattctcttttggtttcacaagactaacccaaattggtcacaaa 24397902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 461
Target Start/End: Complemental strand, 35214308 - 35214268
Alignment:
Q  421 gaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  35214308 gaaattagcttcagcaagctctccaagagcaaacctaattt 35214268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 425
Target Start/End: Complemental strand, 19401369 - 19401318
Alignment:
Q  374 atccactaccaatgagttctttacaaagagatacaaaagagttacaagaaat 425  Q
    |||||||| |||| |||| |||||||||||||| || |||||||||||||||    
T  19401369 atccactatcaataagttttttacaaagagatataatagagttacaagaaat 19401318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 398 - 476
Target Start/End: Complemental strand, 2869717 - 2869639
Alignment:
Q  398 aaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaac--aaacctaatttttatccatttttcaa 476  Q
    |||| |||||||| ||||||||||||||||||||  | |||||| | ||||||  ||||||||||| || |||||||||||    
T  2869717 aaagtgatacaaaggagttacaagaaattagctt--aaaagctcacaaagaacaaaaacctaatttctacccatttttcaa 2869639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 640
Target Start/End: Original strand, 30218269 - 30218386
Alignment:
Q  522 ctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcat 621  Q
    |||| |||||||||||||||||   ||| | |||||||| ||||||||   | |||||||| ||  ||||||| | ||| ||||||||||||| |||| |    
T  30218269 ctaacccccaaaagagaaccaatatttagcttttgatttcctaaggatcccc-cttttggtttcgcaagactcactcaagttgctcacaaagattctcct 30218367  T
Q  622 ttgatgtgtttccaaaccc 640  Q
    ||| ||||||||| |||||    
T  30218368 ttggtgtgtttcccaaccc 30218386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 36283002 - 36283060
Alignment:
Q  402 agatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    ||||| |||||||||||||||||||| |||||||||  | | ||||||||| |||||||    
T  36283002 agataaaaaagagttacaagaaattaacttcaacaaattattcaagaacaatcctaatt 36283060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 270 - 310
Target Start/End: Complemental strand, 17450796 - 17450756
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataaca 310  Q
    ||||| ||||||||||||||||||||| |||||| ||||||    
T  17450796 caaaggataaacaagataaagagagtacagaaaagataaca 17450756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 9e-41; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 275 - 461
Target Start/End: Complemental strand, 5043842 - 5043652
Alignment:
Q  275 aataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgatttc 369  Q
    |||||||||||||||||||||| |||||| ||||||   |||||||||||| | |||||||||||||||||||| ||||| |       |  ||||| ||    
T  5043842 aataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaacaatgacctactatggaggagagattgatctc 5043743  T
Q  370 tctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    || |||| |||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||    
T  5043742 tccaatctactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaacctaattt 5043652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 361 - 508
Target Start/End: Complemental strand, 25073693 - 25073546
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||| ||| |||||| ||||||||| | ||||| ||| ||||||    
T  25073693 attgatttctctaatccactatcaatgagttctttacatagagatacaaaagggttacaataaaatagctttaacaagctcacgaagaataaatctaatt 25073594  T
Q  461 tttatccatttttcaatctctttccatgaacaagacactcaatgattt 508  Q
    | || |  |||||||||||| | |||||||||||| ||||||||||||    
T  25073593 tctaccattttttcaatctcctcccatgaacaagatactcaatgattt 25073546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 274 - 472
Target Start/End: Complemental strand, 21589146 - 21588945
Alignment:
Q  274 gaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgattt 368  Q
    ||||||||||||||| || |||| |||||| ||||||   |||||||||||| | |||||||||||||||  ||| |||||||       |  ||||| |    
T  21589146 gaataaacaagataaggaaagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctggaggagagattgatct 21589048  T
Q  369 ctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcca 468  Q
    ||| ||||||||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||| || |||    
T  21589047 ctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctaccca 21588949  T
Q  469 tttt 472  Q
    ||||    
T  21588948 tttt 21588945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 276 - 474
Target Start/End: Original strand, 22424780 - 22424983
Alignment:
Q  276 ataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgatttct 370  Q
    ||||||||||||||||||||| |||||| ||||||   |||||||||||| | ||||| |||||||||||||| |||||||       |  ||||| |||    
T  22424780 ataaacaagataaagagagtagagaaaagataacaacaccaagaaatgttcacccagtacggtccaacaatgacctactctgaaggagagattgatctct 22424879  T
Q  371 ctaatccactaccaatgagttctttacaaagagatacaaaa--gagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcca 468  Q
    | |||||||||  ||||||||||| ||||||||||||||||  | |||||||||||||||||| ||||||||| | |||||||| |||||||| || |||    
T  22424880 ccaatccactat-aatgagttctt-acaaagagatacaaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctaccca 22424977  T
Q  469 tttttc 474  Q
    ||||||    
T  22424978 tttttc 22424983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 361 - 472
Target Start/End: Original strand, 2972983 - 2973093
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | ||||||||||||||||    
T  2972983 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatt 2973081  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  2973082 tctacccatttt 2973093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 9183075 - 9183224
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||  || | |||||||| |||||||    
T  9183075 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaacaaccctaatt 9183173  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||| ||||||||   | ||||||||||||||||||||||||||    
T  9183174 tctacccattttctcaatctc-accaatgaacaagacactcaatgattttca 9183224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 26954330 - 26954478
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||| | |||||||| |||||||    
T  26954330 attgatctctccaatccactatcaatgagttctt-acaaagagatacagatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatt 26954428  T
Q  461 tttatccatttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || | ||||  |||||||     ||||||||||||||||||||||||||    
T  26954429 tataccaatttcccaatctc-acatatgaacaagacactcaatgattttca 26954478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 276 - 441
Target Start/End: Complemental strand, 26800801 - 26800632
Alignment:
Q  276 ataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactct--nnnnnnnattgatttct 370  Q
    |||||||||||||| |||||| |||||| ||||||   |||||||||||| |||||||||||||||||||||| |||||||         |||||| |||    
T  26800801 ataaacaagataaaaagagtagagaaaagataacaacaccaagaaatgttcatccagttcggtccaacaatgacctactctggaggagagattgatctct 26800702  T
Q  371 ctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctc 441  Q
    | |||||||||  ||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||    
T  26800701 ccaatccacta-taatgagttc-ttacaaagagatacaaaattagttacaagaaattagcttcaacaagctc 26800632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 17758147 - 17758037
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||    
T  17758147 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatt 17758049  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  17758048 tctacccatttt 17758037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 21593788 - 21593678
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||    
T  21593788 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatt 21593690  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  21593689 tctacccatttt 21593678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 26830167 - 26830316
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| |  ||||||||||||||||||||||||||| | ||||||||  ||||||    
T  26830167 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatggattacaagaaattagcttcaacaagctcacaaagaacaactctaatt 26830265  T
Q  461 tttatccattttt-caatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||| |||||||   | ||||||||||||||| ||||||||||    
T  26830266 tctacccatttttccaatctcacccaatgaacaagacactc-atgattttca 26830316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 28137452 - 28137601
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||| ||||||| | |||||||||||||||||| ||||||||| | |||||||| |||||||    
T  28137452 attgatctctccaatccactatcaatgagttctt-acaaagaaatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatt 28137550  T
Q  461 tttatccatttttcaatctctttcc-atgaacaagacactcaatgattttca 511  Q
    | || ||||||| | || |||  || ||||||||||||||||||||||||||    
T  28137551 tctacccattttcccat-tctcaccaatgaacaagacactcaatgattttca 28137601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 270 - 501
Target Start/End: Complemental strand, 17763211 - 17762975
Alignment:
Q  270 caaagaataaacaagataaagagagtata-gaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--tt 363  Q
    ||||| || |||||||||||||||||| | ||||| ||||||   |||||||||||| | | ||||||||||||   |||||||||||       |  ||    
T  17763211 caaaggatgaacaagataaagagagtaaaagaaaagataacaacaccaagaaatgttcacctagttcggtccaaacttgatctactctggaggagagatt 17763112  T
Q  364 gatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttt 463  Q
    |||  ||| ||||||||| ||||||||||||  |||| ||||||||| |||||||||||||||||||||||||||||| | |||||||| |||||||| |    
T  17763111 gatcactccaatccactatcaatgagttcttc-caaaaagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttct 17763013  T
Q  464 atccatttt-tcaatctctttccatgaacaagacactca 501  Q
    | ||||||| ||||||||   | ||||||||||||||||    
T  17763012 acccattttctcaatctc-accaatgaacaagacactca 17762975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 5406244 - 5406392
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||    
T  5406244 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatt 5406342  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  5406343 tcta-ccattttcccaatctc-accaatgaacaagacactcaatgattttca 5406392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 5410569 - 5410717
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||    
T  5410569 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatt 5410667  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  5410668 tcta-ccattttcccaatctc-accaatgaacaagacactcaatgattttca 5410717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 31404719 - 31404867
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||    
T  31404719 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatt 31404817  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||  |  ||||||||||||||||||||||||||    
T  31404818 tcta-ccattttcccaatctcact-gatgaacaagacactcaatgattttca 31404867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 5413438 - 5413586
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||    
T  5413438 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcgcaaagaacaaccctaatt 5413536  T
Q  461 tttatccatttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |  |||  |||||||   | ||||||||||||||||||||||||||    
T  5413537 tctacctttttcccaatctc-accaatgaacaagacactcaatgattttca 5413586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 383 - 508
Target Start/End: Complemental strand, 186817 - 186691
Alignment:
Q  383 caatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc--aatctc 480  Q
    |||||| ||||||||||||||||||||||||| || || || ||| |||||||||||||||||||||||||||| |||| || |||||||||  | ||||    
T  186817 caatgaattctttacaaagagatacaaaagagctataaaaatttaacttcaacaagctctccaagaacaaaccttatttcta-ccatttttccgattctc 186719  T
Q  481 tttccatgaacaagacactcaatgattt 508  Q
    ||||| ||| ||||| |||| |||||||    
T  186718 tttccgtgaccaagagactcgatgattt 186691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 4045548 - 4045398
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaat 459  Q
    |||||| |||| ||||||||| ||||||||| |||||||||||||| ||||   |||||||||||||||||||||||||||   ||||||||| ||||||    
T  4045548 attgatctctccaatccactatcaatgagttatttacaaagagatataaaatgattacaagaaattagcttcaacaagctcataaagaacaaaccctaat 4045449  T
Q  460 ttttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    || || |||||||  ||||||| | | || |||||||||||||||||||||||    
T  4045448 ttcta-ccattttcccaatctc-tccaataaacaagacactcaatgattttca 4045398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 452
Target Start/End: Original strand, 603132 - 603222
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaa 452  Q
    ||||||||||| ||||||||| ||| |||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | ||||||||    
T  603132 attgatttctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 603222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 516 - 613
Target Start/End: Original strand, 603307 - 603405
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaag 613  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| ||||||||||||    
T  603307 tagaatctaacccccaaaagagaaccaaccattagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaag 603405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 30834587 - 30834730
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| ||||||||||||  |||||||||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || ||    
T  30834587 tctccaatccactatcaatgagttcttc-caaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccc 30834685  T
Q  468 attttt--caatctctttccatgaacaagacactcaatgattttca 511  Q
     |||||  |||||||   | ||||||||||||||||||||||||||    
T  30834686 ttttttcccaatctc-accaatgaacaagacactcaatgattttca 30834730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 361 - 461
Target Start/End: Original strand, 3808752 - 3808852
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaat 459  Q
    |||||| |||| ||||||||| |||||||||||| |||||||||||||||| | ||||||||||||||| |||||||||||| | |||||||| ||||||    
T  3808752 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaccctaat 3808850  T
Q  460 tt 461  Q
    ||    
T  3808851 tt 3808852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 2171583 - 2171724
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||  ||||| || | |||||||| |||||||| || ||    
T  2171583 tctccaatccactatcaatgagttctt-acaaagagatacaaagg-gttacaagaaattagctttgacaagttcacaaagaacaaccctaatttcta-cc 2171679  T
Q  468 attttt--caatctctttccatgaacaagacactcaatgattttca 511  Q
    ||||||  |||||||   | ||||||||||||||||||||||||||    
T  2171680 atttttcccaatctc-accaatgaacaagacactcaatgattttca 2171724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 516 - 612
Target Start/End: Original strand, 26830351 - 26830448
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  ||||| || |||||||||||| ||  ||||||||||||| |||||||||||    
T  26830351 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagaatcttctcttttggtttcacaagactcgcccaagttgctcacaaa 26830448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 2908583 - 2908499
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctcca 445  Q
    ||||||||||  ||||||||| |||||||||||||||||  |||||||||||||||  || |||||| |||||||||||||||||    
T  2908583 attgatttcttcaatccactatcaatgagttctttacaataagatacaaaagagttgtaaaaaattatcttcaacaagctctcca 2908499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 461
Target Start/End: Original strand, 33160396 - 33160495
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||  ||||| || | ||||||||  ||||||    
T  33160396 attgatctctccaatccaccatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaactctaatt 33160494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 2973166 - 2973292
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 613  Q
    |||||||||||||| ||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| ||| ||||||| |    
T  2973166 tagaatctaatccctaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgttcacaaatg 2973265  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    |||||   || |||||||||| |||||    
T  2973266 actctgcattcatgtgtttcccaaccc 2973292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 5043568 - 5043442
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 613  Q
    |||||||||| ||||||||||||||||||  ||| |||||||||   |||||||| |||||||||||| ||  ||||||| |||||||||||||| ||||    
T  5043568 tagaatctaacccccaaaagagaaccaactcttagcctttgattccactaaggatcttctcttttggtttcacaagactcacccaaattgctcacaaaag 5043469  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  5043468 actctccactcatgtgtttcccaaccc 5043442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 388 - 482
Target Start/End: Original strand, 5740068 - 5740162
Alignment:
Q  388 agttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctt 482  Q
    ||||||||||||||| |||||||||  |||||| ||||| | |||||||||||||| || | |||||||| ||| |||||||||| |||||||||    
T  5740068 agttctttacaaagaaatacaaaaggtttacaataaattggtttcaacaagctctctaaaagcaaacctagtttctatccattttccaatctctt 5740162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 16452380 - 16452523
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| ||||||||||||  ||||||||||  |||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || ||    
T  16452380 tctccaatccactatcaatgagttcttc-caaagagatatgaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccc 16452478  T
Q  468 attttt--caatctctttccatgaacaagacactcaatgattttca 511  Q
     |||||  |||||||   | ||||||||||||||||||||||||||    
T  16452479 ttttttcccaatctc-accaatgaacaagacactcaatgattttca 16452523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 3038954 - 3039096
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| |||||||||  || |||||||| ||||||||||||||| | ||||||||||||||||||||| |||||| | | |||||| |||||||| || |     
T  3038954 tctccaatccactattaaagagttctt-acaaagagatacaaatgggttacaagaaattagcttcaaaaagctcacaatgaacaaccctaatttctacca 3039052  T
Q  468 atttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    |||||  |||||||   | |||||||||||| |||||||||||||    
T  3039053 attttcccaatctc-accaatgaacaagacattcaatgattttca 3039096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 516 - 608
Target Start/End: Complemental strand, 21593605 - 21593514
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctca 608  Q
    |||||||||| ||||||||||||||||||| ||| | |||||||| |||||||| |||||||||||| ||  ||||||| ||||| |||||||    
T  21593605 tagaatctaacccccaaaagagaaccaacccttagc-tttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctca 21593514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 390 - 461
Target Start/End: Original strand, 12221176 - 12221247
Alignment:
Q  390 ttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||||||||||| |||||||||||||||||| ||||||| |||||| |  ||| ||||||||||||||||||    
T  12221176 ttctttacaaagtgatacaaaagagttacaaaaaattagtttcaacgaattcttcaagaacaaacctaattt 12221247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 33211229 - 33211378
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| |||||| ||  ||||||||||| ||||||||||||||| ||| |||||||||||| ||||| ||||||| | |||||||| | |||||    
T  33211229 attgatctctccaatccattataaatgagttctt-acaaagagatacaaatgagctacaagaaattaacttcatcaagctcacaaagaacaaccataatt 33211327  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || | |||||  |||||||   | |||||||| |||||||||||||||||    
T  33211328 tctaccaattttcccaatctc-accaatgaacaaaacactcaatgattttca 33211378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 17762930 - 17762804
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 613  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| ||||||||| || ||  ||||||| ||||| |||||| | ||||    
T  17762930 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctctttttgtttcacaagactcacccaagttgctcccaaaag 17762831  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  17762830 actctccactcatgtgtttcccaaccc 17762804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 405 - 466
Target Start/End: Original strand, 27106178 - 27106239
Alignment:
Q  405 tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatc 466  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||| || |||||||||||    
T  27106178 tacaaaagagttacaagaaattagcttcaacaatctcttcaacaacacacttaatttttatc 27106239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 405 - 466
Target Start/End: Original strand, 27147984 - 27148045
Alignment:
Q  405 tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatc 466  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||| || |||||||||||    
T  27147984 tacaaaagagttacaagaaattagcttcaacaatctcttcaacaacacacttaatttttatc 27148045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 3808936 - 3809061
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 613  Q
    |||||||||| |||||||| |||||||||| ||| ||||||||||  |||||||| |||||||||||| |   ||||||| ||||| ||||||||||| |    
T  3808936 tagaatctaacccccaaaa-agaaccaacccttagcctttgatttcactaaggattttctcttttggttttacaagactcacccaagttgctcacaaatg 3809034  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  3809035 actctccactcatgtgtttcccaaccc 3809061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 368 - 428
Target Start/End: Complemental strand, 412219 - 412158
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatac-aaaagagttacaagaaattag 428  Q
    |||||||||||||| ||||||||||||   |||||||||| |||||||||||||||||||||    
T  412219 tctctaatccactatcaatgagttcttacaaaagagatacaaaaagagttacaagaaattag 412158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 527 - 582
Target Start/End: Original strand, 22425065 - 22425119
Alignment:
Q  527 ccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggt 582  Q
    ||||||||||||||||||| ||| | |||||||| |||||||||||||||||||||    
T  22425065 ccccaaaagagaaccaacccttagc-tttgatttcctaaggatattctcttttggt 22425119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 514 - 612
Target Start/End: Original strand, 5741016 - 5741114
Alignment:
Q  514 tttagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||||| |||| |||   |||||||| ||| |||||||||| |||||||| ||| ||||| || ||  |||| || |||||||||||||||||    
T  5741016 tttagaatctaaccccccaaaagtaaccaacccttagcctttgatttactaaggatcttcactttttgtttctcaagattcacccaaattgctcacaaa 5741114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 516 - 614
Target Start/End: Complemental strand, 11660546 - 11660450
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaaga 614  Q
    |||||||||| ||||||||  ||||||||| ||| ||||||| || ||| || ||| |||||||||||||| |||| ||  ||||||||||||||||||    
T  11660546 tagaatctaa-ccccaaaat-gaaccaacccttagcctttgaattcctatggttatcctcttttggtctcccaagattcatccaaattgctcacaaaga 11660450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 409 - 461
Target Start/End: Complemental strand, 14563808 - 14563756
Alignment:
Q  409 aaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||||||||||||||| || ||||| || |||||||||||||||| ||||||    
T  14563808 aaagagttacaagaaataagtttcaataaactctccaagaacaaacataattt 14563756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 480
Target Start/End: Complemental strand, 16569106 - 16569038
Alignment:
Q  414 gttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatccatttt-tcaatctc 480  Q
    |||||||||||||||||| ||||||||| | |||||| ||||||||||| || ||||||| ||||||||    
T  16569106 gttacaagaaattagcttaaacaagctcacaaagaacaaaacctaatttctacccattttctcaatctc 16569038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 644
Target Start/End: Complemental strand, 25073076 - 25072996
Alignment:
Q  564 aaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtgtttccaaaccctatg 644  Q
    |||||| |||||||||||| ||| |||||    |||| || | || |||||||||| ||||||||||||||||||||||||    
T  25073076 aaggatcttctcttttggtttcccaagacctatccaagtttcacataaagactctcctttgatgtgtttccaaaccctatg 25072996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 412
Target Start/End: Original strand, 5409113 - 5409163
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaag 412  Q
    |||||| |||| ||||||||| |||||||||| |||||||||||||||||||    
T  5409113 attgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaag 5409163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 3072810 - 3072904
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||| ||| ||||| ||||||||||||   |||||||||||||| ||||||||||||||||| ||  ||||| || | | |||||| ||||||||    
T  3072810 tctccaattcactatcaatgagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttcacaatgaacaaccctaattt 3072904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 474
Target Start/End: Original strand, 6097528 - 6097596
Alignment:
Q  405 tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc 474  Q
    |||||||||||||||||||||||| ||  ||||| || | |||||||| |||||||| || |||||||||    
T  6097528 tacaaaagagttacaagaaattagatttgacaagttcacaaagaacaatcctaatttcta-ccatttttc 6097596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 345
Target Start/End: Original strand, 12221094 - 12221131
Alignment:
Q  308 acaccaagaaatgttaatccagttcggtccaacaatga 345  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  12221094 acaccaagaaatgtttacccagttcggtccaacaatga 12221131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 398 - 434
Target Start/End: Original strand, 26310436 - 26310472
Alignment:
Q  398 aaagagatacaaaagagttacaagaaattagcttcaa 434  Q
    |||||||||||||  ||||||||||||||||||||||    
T  26310436 aaagagatacaaagaagttacaagaaattagcttcaa 26310472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 274 - 511
Target Start/End: Original strand, 42434944 - 42435183
Alignment:
Q  274 gaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgattt 368  Q
    |||||||||||||||||| |||| |||||| ||||||   |||||||||||| | |||||||||||||||  ||| |||||||       |  |||||||    
T  42434944 gaataaacaagataaagaaagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctggaggagagattgattt 42435042  T
Q  369 ctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcca 468  Q
    ||| ||||||||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||| || |||    
T  42435043 ctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctaccca 42435141  T
Q  469 ttttt-caatctctttccatgaacaagacactcaatgattttca 511  Q
    ||||| |||||||   | ||||||||||||||| ||||||||||    
T  42435142 tttttccaatctc-accaatgaacaagacactc-atgattttca 42435183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 219 - 511
Target Start/End: Complemental strand, 3772460 - 3772167
Alignment:
Q  219 atctagatataatctaaaaatcaagtttaaagtaaaaccacaatagaatatcaaagaataaacaagataaagagagtatagaaaatataacacca---ag 315  Q
    |||||||| ||||||| |||||||||  | || |||||||||||  ||   ||||||||||||||||||||||||||| |||||| |||||||||   ||    
T  3772460 atctagatttaatctagaaatcaagtgcatagcaaaaccacaatctaac--caaagaataaacaagataaagagagtagagaaaagataacaccaccaag 3772363  T
Q  316 aaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgatttctctaatccactaccaatgagttctttacaaagagatacaaaaga 413  Q
    |||| || |||||||| ||||||||  ||| |||||||       |  ||||| |||| ||||||||| |||| | ||||| ||||||| ||||||| ||    
T  3772362 aaatatttatccagtttggtccaact-tgacctactctgagagatagattgatctctccaatccactatcaataaattctt-acaaagatatacaaatga 3772265  T
Q  414 gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    |||||||||||||||||| || |||||| | ||||||||||||||||| |||| ||||| ||||||||   | |||||||||||||||||| |||||||    
T  3772264 gttacaagaaattagcttaaataagctcacaaagaacaaacctaatttctatcaattttctcaatctc-accaatgaacaagacactcaatcattttca 3772167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 270 - 472
Target Start/End: Complemental strand, 4283743 - 4283538
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttg 364  Q
    ||||| ||||||||||||||||||||| |||||| ||||||   |||||||||||| | |||||||||||||||  ||| |||||||       |  |||    
T  4283743 caaaggataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctagaggggagattg 4283645  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttta 464  Q
    || |||| ||||||||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | || ||||| |||||||| ||    
T  4283644 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaaaaacaaccctaatttcta 4283546  T
Q  465 tccatttt 472  Q
     |||||||    
T  4283545 cccatttt 4283538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 365 - 511
Target Start/End: Original strand, 1292511 - 1292656
Alignment:
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttta 464  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||| |||||| ||    
T  1292511 atttctcaaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaacttaatttcta 1292609  T
Q  465 tccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
     ||||||| ||||||||   | | |||||||||||||||| |||||||    
T  1292610 cccattttctcaatctc-accaaagaacaagacactcaataattttca 1292656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 532 - 639
Target Start/End: Original strand, 33655548 - 33655655
Alignment:
Q  532 aaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtgtt 631  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||||||| |||||||||| || |||||||||||||||||||| ||| ||| |||||||    
T  33655548 aaagagaaccaacccttaacctttgattttctaaggatcttctcttttgttctcctaagattcacccaaattgctcacaaagacactcctttaatgtgtt 33655647  T
Q  632 tccaaacc 639  Q
    ||||||||    
T  33655648 tccaaacc 33655655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 514 - 640
Target Start/End: Complemental strand, 40585666 - 40585541
Alignment:
Q  514 tttagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaag 613  Q
    |||||||||||  ||||||||||||||||||| |||  ||||||||| |||||||| |||||||||||||| | || |||| ||||||||||||||||||    
T  40585666 tttagaatctac-ccccaaaagagaaccaacccttagtctttgatttcctaaggatcttctcttttggtctaccaatactcacccaaattgctcacaaag 40585568  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    |||||| |||||||||||| |||||||    
T  40585567 actctcctttgatgtgttttcaaaccc 40585541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 361 - 513
Target Start/End: Complemental strand, 33352274 - 33352123
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||| ||||||||| || | |||||||| |||||||    
T  33352274 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattaggttcaacaagttcacaaagaacaaccctaatt 33352176  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttcaat 513  Q
    |||| |||||||  |||||||   | ||||||||||||||||||||||||||||    
T  33352175 tttacccattttcccaatctc-accaatgaacaagacactcaatgattttcaat 33352123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 361 - 508
Target Start/End: Original strand, 32902217 - 32902364
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||| ||||| |||||| ||||||| |||||||||||||| ||||||||||||||||||||||||   |||||| |||||||| |||||    
T  32902217 attgatctctcaaattcactatcaatgaattctttagaaagagatacaaaaaagttacaagaaattagcttcaacagagtctccatgaacaaacataatt 32902316  T
Q  461 tttatccatttttcaatctctttccatgaacaagacactcaatgattt 508  Q
    | || |||||| |||||||| |  ||||| ||||| ||||||||||||    
T  32902317 tctacccatttatcaatctcctctcatgatcaagagactcaatgattt 32902364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 361 - 513
Target Start/End: Complemental strand, 30291731 - 30291579
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaat 459  Q
    |||||| |||| ||||||||| ||| || ||||| |||||| |||||||| |||||||||||||||||||||||||||||| | |||||| |||||||||    
T  30291731 attgatctctccaatccactatcaaagaattctt-acaaagtgatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacctaat 30291633  T
Q  460 ttttatccatttt-tcaatctctttccatgaacaagacactcaatgattttcaat 513  Q
    || || ||||||| ||||||||   | ||||||||||||||||||||||||||||    
T  30291632 ttctacccattttctcaatctc-accaatgaacaagacactcaatgattttcaat 30291579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 4162620 - 4162475
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||| ||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||| |    
T  4162620 attgatatctccaatcc-ctatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagttctcaaagaacaaacctaact 4162523  T
Q  461 tttatccatttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||| |  || ||    ||||||||||||||||||||||||||    
T  4162522 tctacccattttcctctcact---aatgaacaagacactcaatgattttca 4162475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 361 - 480
Target Start/End: Complemental strand, 18655524 - 18655405
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||||||||||||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | |||||||| | |||||    
T  18655524 attgatctctctaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccttaatt 18655426  T
Q  461 tttatccatttt-tcaatctc 480  Q
    | || ||||||| ||||||||    
T  18655425 tctacccattttctcaatctc 18655405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 507
Target Start/End: Complemental strand, 7597739 - 7597592
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaat 459  Q
    |||||| |||| ||||||||| |||||  |||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||| ||| ||    
T  7597739 attgatctctccaatccactatcaatgcattctttacaaagagatacaaaaggattataagaaattagcttcaacaagctctccaagaacaaaacctgat 7597640  T
Q  460 ttttatccatttttcaatctctttccatgaacaagacactcaatgatt 507  Q
    || |   | |||| ||||||||| ||| |||||| | |||||||||||    
T  7597639 ttattctctttttccaatctcttcccaagaacaaaagactcaatgatt 7597592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 373 - 511
Target Start/End: Complemental strand, 27811390 - 27811253
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 472  Q
    ||||||||| ||||| |||||| ||||||||||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||    
T  27811390 aatccactatcaatgggttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttt 27811292  T
Q  473 -tcaatctctttccatgaacaagacactcaatgattttca 511  Q
      |||||||   | ||||||||||||||||||||||||||    
T  27811291 cccaatctc-accaatgaacaagacactcaatgattttca 27811253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 30143464 - 30143354
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||    
T  30143464 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatt 30143366  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  30143365 tctacccatttt 30143354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 43036547 - 43036398
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| || |||||||||||||| ||||||||| || | |||||||| |||||||    
T  43036547 attgatctctcaaatccactatcaatgagttctt-acaaagagatacaaatgaattacaagaaattagtttcaacaagttcacaaagaacaaccctaatt 43036449  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  43036448 tctacccattttcccaatctc-accaatgaacaagacactcaatgattttca 43036398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 42498318 - 42498168
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||| || | |||||||| |||||||    
T  42498318 attgatctctccaatccactatcaatgagttctt-acaaagaaatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 42498220  T
Q  461 tttatccattttt--caatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |  |||||  |||||||   | ||||||||||||||||||||||||||    
T  42498219 tctacctttttttcccaatctc-accaatgaacaagacactcaatgattttca 42498168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 4731775 - 4731633
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||| |||||||||||| | |||| ||| |||||||| || ||    
T  4731775 tctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattaggttcaacaagctcacaaagagcaaccctaatttctaccc 4731677  T
Q  468 atttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    |||||  |||||||   | ||||||||||||||||||||||||||    
T  4731676 attttcccaatctc-accaatgaacaagacactcaatgattttca 4731633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 373 - 508
Target Start/End: Original strand, 11712056 - 11712192
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatccattt 471  Q
    ||||||||| ||||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||||||| | |||| ||||||||||| |||   |||    
T  11712056 aatccactatcaatgagttatttacaaagagatataaaagggtttcaagaaattagcttcaacaagctctcaaggaacaaaacctaatttatattatttt 11712155  T
Q  472 ttcaatctctttccatgaacaagacactcaatgattt 508  Q
     |||||||||| | | |||||| | ||||||||||||    
T  11712156 ctcaatctcttccaaagaacaaaagactcaatgattt 11712192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 40328904 - 40328793
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaat 459  Q
    |||||| |||| ||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||| || ||||||||| | |||||||||||||||    
T  40328904 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaatgagttacaagaaattagtttaaacaagctcacaaagaacaaacctaat 40328806  T
Q  460 ttttatccatttt 472  Q
    || || |||||||    
T  40328805 ttctacccatttt 40328793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 5689395 - 5689246
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||  |||||||| | ||| || | | |||||    
T  5689395 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagctcacaaagcaccaccttaatt 5689297  T
Q  461 tttatccattttt-caatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||| ||||||| ||  ||||||||||||||||||||||||||    
T  5689296 tctacccatttttccaatctcatt-aatgaacaagacactcaatgattttca 5689246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 15212910 - 15212761
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| |||||| || |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||    
T  15212910 attgatctctccaatccattatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 15212812  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | |||||||||||| |||||||||||||    
T  15212811 tctacccattttcccaatctc-accaatgaacaagacattcaatgattttca 15212761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 18141944 - 18141796
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||| |||||||| |||||| |||||||| | |||||||||||||||||||||||||||| | |||||| |||||||||    
T  18141944 attgatctctccaatccactatcaaagagttctt-acaaagtgatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aacctaatt 18141847  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  18141846 tctacccattttcacaatctc-accaatgaacaagacactcaatgattttca 18141796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 472
Target Start/End: Original strand, 19491743 - 19491853
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| ||| |||||||||| ||| |||||||| ||||||||||||||| | ||||||||||||||| |||||||||||| | ||||||||||||||||    
T  19491743 attgatctctttaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaacctaatt 19491841  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  19491842 tctacccatttt 19491853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 34256551 - 34256699
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||||| |||||||||||||| |||  ||||| || | |||||||| |||||||    
T  34256551 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaaccctaatt 34256649  T
Q  461 tttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||||| ||||||   | ||||||||||||||||||||||||||    
T  34256650 tcta-ccatttttccaatctcac-caatgaacaagacactcaatgattttca 34256699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 270 - 511
Target Start/End: Complemental strand, 11384204 - 11383962
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaat---ataacaccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttg 364  Q
    ||||| ||||||||||||||||||||| ||||||    | |||||||| ||||||| | |||||||||||||||  | | |||||||       |  | |    
T  11384204 caaaggataaacaagataaagagagtaaagaaaaatagacaacaccaaaaaatgttcacccagttcggtccaact-taacctactctggaggagagatcg 11384106  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttta 464  Q
    || |||| |||||| || ||||| |||||| ||||||||||||||| |||||||||||||||||||||||||| ||| | |||||||| |||||||| ||    
T  11384105 atgtctccaatccagtatcaatgggttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaaactcacaaagaacaaccctaatttcta 11384007  T
Q  465 tccattttt-caatctctttccatgaacaagacactcaatgattttca 511  Q
     |||||||| ||||||| |   ||||||||||||||| ||||||||||    
T  11384006 cccatttttccaatctcat--aatgaacaagacactc-atgattttca 11383962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 31218374 - 31218231
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || ||    
T  31218374 tctctaatccactatcaatgagttcttc-caaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttcta-cc 31218277  T
Q  468 attttt---caatctctttccatgaacaagacactcaatgattttca 511  Q
    ||||||   |||||||   | ||||||||||||||||||||||||||    
T  31218276 attttttcccaatctc-accaatgaacaagacactcaatgattttca 31218231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 373 - 472
Target Start/End: Original strand, 3303726 - 3303824
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 472  Q
    ||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||| || ||||||||| | |||||||||| |||||| || |||||||    
T  3303726 aatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattaggttaaacaagctcacaaagaacaaacttaatttctacccatttt 3303824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 40221869 - 40221759
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||| |||||||| ||||||||||||||| | ||||||||||||||| |||||||||||| | |||||||| |||||||    
T  40221869 attgatctctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaccctaatt 40221771  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  40221770 tctacccatttt 40221759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 40321204 - 40321055
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||| ||||| ||||||||||||||| || | |||||||||||||| ||||||||||||| | | |||||| |||||||    
T  40321204 attgatctctccaatccactatcaaagagtt-tttacaaagagatactaatgggttacaagaaattaacttcaacaagctcacaatgaacaaccctaatt 40321106  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  40321105 tctacccattttcccaatctc-acctatgaacaagacactcaatgattttca 40321055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 373 - 472
Target Start/End: Complemental strand, 44353905 - 44353807
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 472  Q
    ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||| || |||||||    
T  44353905 aatccactatcaatgagttctt-acaaagagatacaaatgtgttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccatttt 44353807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 34254375 - 34254523
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||| ||||||| ||||||||||||||||| |||||||||||||| |||  ||||| || | |||||||| |||||||    
T  34254375 attgatctctccaatccactatcaataagttctt-acaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaaccctaatt 34254473  T
Q  461 tttatccatttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || || |||  |||||||   | ||||||||||||||||||||||||||    
T  34254474 tctacccttttcccaatctc-accaatgaacaagacactcaatgattttca 34254523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 1822417 - 1822296
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc-taat 459  Q
    |||||| |||| ||| |||||  | |||||| |||||||| ||||| ||||| |||||||||||||||||||||||||||| | ||||||||||| ||||    
T  1822417 attgatctctccaattcactattagtgagttatttacaaatagatataaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccataat 1822318  T
Q  460 ttttatccatttttcaatctct 481  Q
    || ||||| |||| ||||||||    
T  1822317 ttctatcctttttgcaatctct 1822296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 1856862 - 1856741
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc-taat 459  Q
    |||||| |||| ||| |||||  | |||||| |||||||| ||||| ||||| |||||||||||||||||||||||||||| | ||||||||||| ||||    
T  1856862 attgatctctccaattcactattagtgagttatttacaaatagatataaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccataat 1856763  T
Q  460 ttttatccatttttcaatctct 481  Q
    || ||||| |||| ||||||||    
T  1856762 ttctatcctttttgcaatctct 1856741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 384 - 508
Target Start/End: Original strand, 33655370 - 33655494
Alignment:
Q  384 aatgagttctttacaaagagatacaaaagagtt-acaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctt 482  Q
    ||||| |||||| |||||||||| |||| |||| || |||||| ||||||||||| ||||| ||||||||| ||||||| |||| |||| | ||| || |    
T  33655370 aatgaattcttttcaaagagataaaaaaaagtttacgagaaatcagcttcaacaaactctctaagaacaaatctaatttctatctatttcttaatatc-t 33655468  T
Q  483 tccatgaacaagacactcaatgattt 508  Q
    ||||||||||||||||||||||||||    
T  33655469 tccatgaacaagacactcaatgattt 33655494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 361 - 461
Target Start/End: Original strand, 12702678 - 12702777
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| |||||| || |||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||| || | |||||||| |||||||    
T  12702678 attgatctctccaatccaatatcaatgagttctt-acaaagagacacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 12702776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 1746270 - 1746412
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttta--t 465  Q
    |||| ||||||||| ||||||||||||  |||||||||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| ||  |    
T  1746270 tctccaatccactatcaatgagttctt--caaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacct 1746367  T
Q  466 ccatttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
       ||||||||||||   | ||||||||||||||||||||||||||    
T  1746368 ttttttttcaatctc-accaatgaacaagacactcaatgattttca 1746412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 6599096 - 6598986
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||||||||||||| |||||||||||| |||||   ||||||| | |||||||||||||||||| ||||||||| | |||||||||| |||||    
T  6599096 attgatctctctaatccactatcaatgagttctt-acaaaagtatacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaacttaatt 6598998  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  6598997 tctacccatttt 6598986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 6674549 - 6674439
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||||||||||||| |||||||||||| |||||   ||||||| | |||||||||||||||||| ||||||||| | |||||||||| |||||    
T  6674549 attgatctctctaatccactatcaatgagttctt-acaaaagtatacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaacttaatt 6674451  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  6674450 tctacccatttt 6674439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 472
Target Start/End: Original strand, 10930243 - 10930353
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||||| |||||| ||||||||||| ||| | |||||||||||||||||||||| ||||| | |||| ||| |||||||    
T  10930243 attgatctctccaatccactatcaatgtgttctt-acaaagagatataaatgggttacaagaaattagcttcaacgagctcacaaagagcaaccctaatt 10930341  T
Q  461 tttatccatttt 472  Q
    | ||||||||||    
T  10930342 tctatccatttt 10930353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 41366658 - 41366807
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| |||||||||  ||||||||||| |||||| ||||||||   |||| ||||||||||||| ||||||||  | |||||||||| |||||    
T  41366658 attgatctctccaatccactataaatgagttctt-acaaagggatacaaataggttaaaagaaattagcttaaacaagcttacaaagaacaaacataatt 41366756  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||| ||||||||  | | |||||||||||||||||||||||||    
T  41366757 tctacccattttctcaatctcagt-cttgaacaagacactcaatgattttca 41366807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 17982770 - 17982627
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| ||||||||||||  |||||||||||||||| |||||||||||||| |||  ||||| || | |||||||| |||||||| || ||    
T  17982770 tctccaatccactatcaatgagttcttc-caaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaaccctaatttctaccc 17982672  T
Q  468 attttt--caatctctttccatgaacaagacactcaatgattttca 511  Q
     |||||  |||||||   | ||||||||||||||||||||||||||    
T  17982671 ttttttcccaatctc-accaatgaacaagacactcaatgattttca 17982627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 388 - 508
Target Start/End: Complemental strand, 41267067 - 41266946
Alignment:
Q  388 agttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatccatttt-tcaatctctttcc 485  Q
    ||||||||| ||||| |||||||||||||||||||||||||  |||||||| |||| |||||| ||||||||||| || ||||||| |||| ||||| |     
T  41267067 agttctttagaaagaaatacaaaagagttacaagaaattagtctcaacaagttctctaagaacaaaacctaatttcta-ccattttctcaaactcttcct 41266969  T
Q  486 atgaacaagacactcaatgattt 508  Q
    | |||||||| ||||||||||||    
T  41266968 aagaacaagagactcaatgattt 41266946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 11383927 - 11383830
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  11383927 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 11383830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 368 - 472
Target Start/End: Complemental strand, 9765862 - 9765759
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||   ||||||| | |||||||| |||||||| || ||    
T  9765862 tctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgccaagctcacaaagaacaaccctaatttctaccc 9765764  T
Q  468 atttt 472  Q
    |||||    
T  9765763 atttt 9765759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 383 - 505
Target Start/End: Original strand, 3231861 - 3231984
Alignment:
Q  383 caatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccatttttcaatctct 481  Q
    |||| ||||||||||||||||||||||||  |||| || |||||||||||||||||||| | ||||||||| |||||||| ||    ||| |||||||||    
T  3231861 caataagttctttacaaagagatacaaaatggttaaaaaaaattagcttcaacaagctcacgaagaacaaagcctaatttctacatttttctcaatctct 3231960  T
Q  482 ttccatgaacaagacactcaatga 505  Q
    | | | |||||||| |||||||||    
T  3231961 tcctaagaacaagagactcaatga 3231984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 10240264 - 10240185
Alignment:
Q  376 ccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc 455  Q
    |||||| ||||||||||||||||||||||| ||| |  ||||||||||||||| |||||||||||| | |||||||||||    
T  10240264 ccactatcaatgagttctttacaaagagatccaacatggttacaagaaattagattcaacaagctcacaaagaacaaacc 10240185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 409 - 511
Target Start/End: Complemental strand, 10929876 - 10929774
Alignment:
Q  409 aaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttca-atctctttccatgaacaagacactcaatgatt 507  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||| || ||||||| || |||||   | | ||||||||||||||||||||    
T  10929876 aaagagttacaagaaattagcttcaacaagctcacaaagaacaaacataatttctacccattttccatatctc-accaaagaacaagacactcaatgatt 10929778  T
Q  508 ttca 511  Q
    ||||    
T  10929777 ttca 10929774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 377 - 511
Target Start/End: Original strand, 18106139 - 18106271
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-a 475  Q
    ||||| |||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||| | ||||||||   || ||| |||||||||||| |    
T  18106139 cactatcaatgagttctt-acaaa-agatacaaatgagttacaagaaattagcttcaacaagctcgcaaagaacaactatagtttctatccatttttcca 18106236  T
Q  476 atctctttccatgaacaagacactcaatgattttca 511  Q
    |||||   | |||||||||||||||||  |||||||    
T  18106237 atctcac-cgatgaacaagacactcaacaattttca 18106271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 373 - 461
Target Start/End: Original strand, 1345427 - 1345514
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||||||| ||||||||||||| |||||||||||| | | ||||||||||||||||||||| || ||| | |||||||| ||||||||    
T  1345427 aatccactatcaatgagttcttt-caaagagatacatatgggttacaagaaattagcttcaataaactcacaaagaacaaccctaattt 1345514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 44303972 - 44303828
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| |||||||||||| | |||||||||||||||  |||||||||||||||||  ||||| || | |||||||| | |||||| || ||    
T  44303972 tctccaatccactatcaatgagttcttaa-aaagagatacaaaaggattacaagaaattagctttgacaagttcacaaagaacaaccttaatttctaccc 44303874  T
Q  468 attttt---caatctctttccatgaacaagacactcaatgattttca 511  Q
     |||||   |||||||   | ||||||||||||||||||||||||||    
T  44303873 tttttttcccaatctc-accaatgaacaagacactcaatgattttca 44303828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 19945410 - 19945554
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagag-ttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatc 466  Q
    |||| ||||||||| ||||||||||||  |||||||||||||||| | |||||||||||||||||  ||||| || | |||||||| | |||||| || |    
T  19945410 tctccaatccactatcaatgagttcttc-caaagagatacaaaagtggttacaagaaattagctttgacaagttcacaaagaacaaccataatttctacc 19945508  T
Q  467 cattttt--caatctctttccatgaacaagacactcaatgattttca 511  Q
    | |||||  |||||||   | ||||||||||||||||||||||||||    
T  19945509 cttttttcccaatctc-accaatgaacaagacactcaatgattttca 19945554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 394 - 461
Target Start/End: Complemental strand, 30909459 - 30909393
Alignment:
Q  394 ttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||||||||||||||| ||||||||||||||||| || ||||||||||||||||  |||||||||||    
T  30909459 ttacaaagagatacaaa-gagttacaagaaattagtttaaacaagctctccaagagtaaacctaattt 30909393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 397 - 511
Target Start/End: Original strand, 41364926 - 41365040
Alignment:
Q  397 caaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaaga 495  Q
    ||||| |||||||| | |||||||||||||||||| ||||| ||| | ||||||||||||||||| || | |||||  |||||||  | | |||||||||    
T  41364926 caaagggatacaaatgtgttacaagaaattagcttaaacaaactcacaaagaacaaacctaatttctaccaattttcccaatctcagt-cttgaacaaga 41365024  T
Q  496 cactcaatgattttca 511  Q
    ||||||||||||||||    
T  41365025 cactcaatgattttca 41365040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 40221686 - 40221560
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 613  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| |   ||||||| || || |||||||| ||||    
T  40221686 tagaatctaacccccaaaagagaaccaacctttagcctttgatttcactaaggatcttctcttttggttttacaagactcacctaagttgctcacaaaag 40221587  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  40221586 actctccactcatgtgtttcccaaccc 40221560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 42435218 - 42435344
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 613  Q
    |||||||||| || |||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| | ||| |||||||| ||||    
T  42435218 tagaatctaaccctcaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcactcaagttgctcacaaaag 42435317  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||  || || ||||||| |||||    
T  42435318 actctccattcatatgtttcccaaccc 42435344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 4283465 - 4283368
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  |||||||  |||| || ||||||||    
T  4283465 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcaaccaagtttctcacaaa 4283368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 393 - 505
Target Start/End: Complemental strand, 11137118 - 11137007
Alignment:
Q  393 tttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaac 491  Q
    |||||||||||||||||||  |||| |||||||||||||||||||| ||| |||| ||| || |||||| || ||||||| |||||||| |||||||||     
T  11137118 tttacaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta-ccattttctcaatctc-ttccatgaaa 11137021  T
Q  492 aagacactcaatga 505  Q
    || | |||||||||    
T  11137020 aatagactcaatga 11137007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 361 - 437
Target Start/End: Complemental strand, 8153882 - 8153807
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaa 437  Q
    |||||| |||| |||| |||| |||||||||||| ||||||| |||||||||||||||| ||| |||||||||||||    
T  8153882 attgatctctccaatcaactatcaatgagttctt-acaaagatatacaaaagagttacacgaatttagcttcaacaa 8153807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 368 - 439
Target Start/End: Complemental strand, 10015197 - 10015128
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagc 439  Q
    |||| ||||||||| |||||||||| | |  |||||||||||| ||||||||||||||||||||||||||||    
T  10015197 tctccaatccactatcaatgagttcctaa--aagagatacaaatgagttacaagaaattagcttcaacaagc 10015128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 361 - 456
Target Start/End: Original strand, 29796364 - 29796460
Alignment:
Q  361 attgatttctctaatccactaccaatgagttcttt-acaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacct 456  Q
    |||||| |||| |||||| ||  |||||||| ||| ||||| || |||||||  |||||||||||| |||||||||||| |||||||||||||||||    
T  29796364 attgatctctccaatccattataaatgagtttttttacaaataggtacaaaaatgttacaagaaatcagcttcaacaagttctccaagaacaaacct 29796460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 377 - 511
Target Start/End: Original strand, 8965751 - 8965884
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccatttttca 475  Q
    ||||| |||||||||||| ||||||||||| ||||| |||| ||||||||| ||||||||| |||   ||||||||| |||||||| || |  |||  ||    
T  8965751 cactatcaatgagttctt-acaaagagatataaaagggttataagaaattaacttcaacaaactcataaagaacaaaccctaatttctacctttttccca 8965849  T
Q  476 atctctttccatgaacaagacactcaatgattttca 511  Q
    |||||   | ||||||||||||||||||||||||||    
T  8965850 atctc-accaatgaacaagacactcaatgattttca 8965884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 377 - 511
Target Start/End: Original strand, 7444878 - 7445011
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 476  Q
    ||||| ||||||| |  ||||||||||||| | | | ||||||| |||||  |||||||||||| |   |||||||| ||||||| || | |||| ||||    
T  7444878 cactagcaatgagattcttacaaagagatatagagg-gttacaacaaatttacttcaacaagctatattagaacaaatctaatttctaccaatttctcaa 7444976  T
Q  477 tctctttccatgaacaagacactcaatgattttca 511  Q
    |||||| |||||||||||| |||||| ||||||||    
T  7444977 tctcttcccatgaacaagagactcaaagattttca 7445011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 609
Target Start/End: Complemental strand, 44353733 - 44353639
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac 609  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  ||||| || || ||||||||| ||  ||||||| ||||| ||||||||    
T  44353733 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagaatcttttcttttggtttcacaagactcacccaagttgctcac 44353639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 40328720 - 40328623
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||||   || ||||||||||  |||| ||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  40328720 tagaatctaacccccaaaagagaaccaactcatagcctttgatttcactaaagatcttctcttttggtttcacaagactcacccaagttgctcacaaa 40328623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 378 - 508
Target Start/End: Complemental strand, 40585822 - 40585691
Alignment:
Q  378 actaccaatgagttcttt-acaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaa-caaacctaatttttatccatttttca 475  Q
    |||| ||||||||||||| ||||| |||||||||||  |||||| ||||| | ||||||||||||  ||||||  |||| ||||| |||  |||||||||    
T  40585822 actatcaatgagttcttttacaaaaagatacaaaaggcttacaaaaaattcgtttcaacaagctc-acaagaataaaacttaattcttactcatttttca 40585724  T
Q  476 atctctttccatgaacaagacactcaatgattt 508  Q
    || ||||  ||| ||||||| ||||||||||||    
T  40585723 atttcttctcataaacaagagactcaatgattt 40585691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 11137296 - 11137213
Alignment:
Q  218 tatctagatataatctaaaaatcaagtttaaagtaaaaccacaatagaatatcaaagaataaacaagataaagagagtatagaaaa 303  Q
    |||||| || |||||||  |||||||| ||||| ||||||||||| |||   ||| ||||||||||||||||||||||| ||||||    
T  11137296 tatctaaatctaatctagcaatcaagtataaagaaaaaccacaatcgaac--caatgaataaacaagataaagagagtagagaaaa 11137213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 219 - 351
Target Start/End: Original strand, 9633513 - 9633640
Alignment:
Q  219 atctagatataatctaaaaatcaagtttaaagtaaaaccacaatagaatatcaaagaataaacaagataaagagagtatagaaaatataacacc-aagaa 317  Q
    |||||||| |||| ||| |||||| | |||| ||||| |||||| |||   |||||||||||||||||||||||||  ||||||  | |||||| |||||    
T  9633513 atctagatctaatataacaatcaattgtaaaataaaatcacaattgaac--caaagaataaacaagataaagagag--tagaaa--acaacaccaaagaa 9633606  T
Q  318 atgttaatccagttcggtccaacaatgatctact 351  Q
     |||| |  ||||||||||||||||||| |||||    
T  9633607 ttgtttacacagttcggtccaacaatgacctact 9633640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 2999751 - 2999820
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatat---aacaccaagaaatgttaatccagttcggtc 336  Q
    ||||||||||||||||||||||||||| |||||| ||   |||| ||||||||||| |  ||||||||||    
T  2999751 caaagaataaacaagataaagagagtagagaaaagatatcaacatcaagaaatgtttactcagttcggtc 2999820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 539 - 617
Target Start/End: Original strand, 10101402 - 10101480
Alignment:
Q  539 accaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactc 617  Q
    ||||||| |||  |||||||||  ||||||| | |||||||| |||||||||| ||  |||| ||||||||||||||||    
T  10101402 accaacccttagactttgatttaataaggatctcctcttttgatctcctaagattcatccaagttgctcacaaagactc 10101480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 421 - 509
Target Start/End: Complemental strand, 38863936 - 38863847
Alignment:
Q  421 gaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccatttttc-aatctctttccatgaacaagacactcaatgatttt 509  Q
    |||||||| |||||||| |||||| | |||||| |||||||| || ||||||  | |||||||||||| |||||||| |||||||||||||    
T  38863936 gaaattagtttcaacaaactctcccaaaacaaaacctaatttcta-ccatttccctaatctctttccaagaacaagagactcaatgatttt 38863847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 426
Target Start/End: Original strand, 3073917 - 3073981
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaatt 426  Q
    |||||| |||| || ||| || |||||||||||| ||||||||||||||||  |||||||||||||    
T  3073917 attgatctctccaagccattatcaatgagttctt-acaaagagatacaaaaatgttacaagaaatt 3073981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 516 - 611
Target Start/End: Complemental strand, 18655341 - 18655246
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaa 611  Q
    |||||||||| ||||||||||| | ||||| ||| ||||||||||  |||||||| |||||||||| | ||  ||||||| || || ||||||||||    
T  18655341 tagaatctaa-ccccaaaagagtatcaacccttagcctttgatttcactaaggatcttctcttttgatttcacaagactcaccgaagttgctcacaa 18655246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 428
Target Start/End: Complemental strand, 40873769 - 40873712
Alignment:
Q  369 ctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattag 428  Q
    ||||||| ||||| ||| ||||||||||||||||| |||  ||| |||||||||||||||    
T  40873769 ctctaattcactatcaaagagttctttacaaagagttac--aagggttacaagaaattag 40873712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 2e-38; HSPs: 73)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 219 - 508
Target Start/End: Complemental strand, 317032 - 316740
Alignment:
Q  219 atctagatataatctaaaaatcaagtttaaagtaaaaccacaatagaatatcaaagaataaacaagataaagagagtatagaaaatataacacca---ag 315  Q
    |||||||| | |||||  || ||||| ||||| ||||||||||| |||   |||||||||||||| ||||||||||||  ||||| | |||| ||   ||    
T  317032 atctagatcttatctagcaaccaagtgtaaagcaaaaccacaattgaac--caaagaataaacaaaataaagagagtagggaaaagagaacaacacaaag 316935  T
Q  316 aaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgatttctctaatccactaccaatgagttctttacaaagagatacaaaaga 413  Q
    || |||| | | |||||||||||||||||| |||||||       |  |||||  |||  ||||| || ||||||||||||||||||||||||||||||     
T  316934 aattgtttaccaagttcggtccaacaatgacctactctaggggagagattgatccctccgatccattatcaatgagttctttacaaagagatacaaaagg 316835  T
Q  414 gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattt 508  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| || |  ||| ||||||| || || | ||||||| || |||||||||    
T  316834 attacaagaaattagcttcaacaagctctccaagaacaaacctaatttctacctttttctcaatcttttcccctaaacaagagacccaatgattt 316740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 361 - 508
Target Start/End: Original strand, 10054860 - 10055006
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||| ||||| |||||||||| ||||||||||||||||||| |||| ||||||||||||||||||| |||| ||||||||||| |||||    
T  10054860 attgatatctccaatacactatcaatgagttcattacaaagagatacaaaag-gttataagaaattagcttcaacaaactcttcaagaacaaacataatt 10054958  T
Q  461 tttatccatttttcaatctctttccatgaacaagacactcaatgattt 508  Q
    | || |||||| |||||||||||| |||||||| | ||||||||||||    
T  10054959 tctacccatttctcaatctctttctatgaacaatagactcaatgattt 10055006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 377 - 508
Target Start/End: Complemental strand, 35616278 - 35616147
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 476  Q
    ||||| |||||||||||||||||||| ||||||||| |||||||||||||| ||| ||| ||||||||||||||||||||||||| ||  ||||| ||||    
T  35616278 cactatcaatgagttctttacaaagaaatacaaaagggttacaagaaattaacttaaacgagctctccaagaacaaacctaatttctactcatttctcaa 35616179  T
Q  477 tctctttccatgaacaagacactcaatgattt 508  Q
    |||||| || ||||||||| ||||||||||||    
T  35616178 tctcttcccgtgaacaagagactcaatgattt 35616147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 39468593 - 39468742
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||||||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||    
T  39468593 attgatctctctaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 39468691  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||  |  ||||||||||||||||||||||||||    
T  39468692 tctacccattttcccaatctcact-aatgaacaagacactcaatgattttca 39468742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 13239875 - 13239726
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || | ||||| || |||||||    
T  13239875 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagcttcaacaagttcacaaagaaaaaccctaatt 13239777  T
Q  461 tttatccattttt--caatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||||  |||||||   | ||||||||||||||||||||||||||    
T  13239776 tcta-ccattttttccaatctc-accaatgaacaagacactcaatgattttca 13239726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 270 - 472
Target Start/End: Complemental strand, 40147480 - 40147275
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataa---caccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttg 364  Q
    ||||| |||||||||||||| |||||| |||||| ||||   ||| || ||||||| | |||||||||||||||  ||| |||||||       |  |||    
T  40147480 caaaggataaacaagataaatagagtaaagaaaagataaaaacacaaaaaaatgttcacccagttcggtccaact-tgacctactctggaggagagattg 40147382  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttta 464  Q
    || |||| ||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | |||||||| |||||||| ||    
T  40147381 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacgaagaacaaccctaatttcta 40147283  T
Q  465 tccatttt 472  Q
     |||||||    
T  40147282 cccatttt 40147275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 361 - 504
Target Start/End: Complemental strand, 3326038 - 3325895
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||||||||||| | || ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  3326038 attgatctctctaatccaccatcattgagttctttacaaagagatacacaatggttacaagaaattagcttcaacaagctcttcaagaacaaaactaatt 3325939  T
Q  461 tttatccatttttcaatctctttccatgaacaagacactcaatg 504  Q
    | || |  ||||||||| |||| | | |||||||| || |||||    
T  3325938 tctacctttttttcaatttcttcctaagaacaagatacccaatg 3325895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 270 - 508
Target Start/End: Complemental strand, 30803044 - 30802807
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataacaccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnnattgatttc 369  Q
    ||||||||||||||||||||||||||| | |||  |  |||| || ||||||||| || ||||||||||||||||| ||| | |       |  ||| ||    
T  30803044 caaagaataaacaagataaagagagtagaaaaacaaacacacaaaaaaatgttaaccctgttcggtccaacaatgacctattgtgcgggagagagatctc 30802945  T
Q  370 tctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccat 469  Q
    |||  | || || ||| |||||||||||||| |||||||||||  |||||| ||||||| |||||||||||| | |||||||||||||| || || ||||    
T  30802944 tctgcttcattatcaacgagttctttacaaatagatacaaaaggattacaataaattagtttcaacaagctcacaaagaacaaacctaa-ttctacccat 30802846  T
Q  470 ttttcaatctctttccatgaacaagacactcaatgattt 508  Q
    |||||||||||||  |||||| |||| ||| ||||||||    
T  30802845 ttttcaatctcttctcatgaataagagactaaatgattt 30802807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 13695741 - 13695884
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatc 466  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| | ||||||||| |||||||| || |    
T  13695741 tctctaatccactattaatgagttctttacaaagagatacaaaagggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttgtacc 13695840  T
Q  467 catttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | |||  ||||||| | | | ||| |||| |||||||||||||||    
T  13695841 cttttcccaatctc-tccaaagaaaaagatactcaatgattttca 13695884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 368 - 507
Target Start/End: Complemental strand, 16452197 - 16452059
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| |||||||||  ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||   |||||||||| |||||| || ||    
T  16452197 tctccaatccactatgaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcagaaagaacaaacttaatttctaccc 16452099  T
Q  468 attttt-caatctctttccatgaacaagacactcaatgatt 507  Q
    |||||| |||||||  || ||||||||||||||||||||||    
T  16452098 atttttccaatctc-atcaatgaacaagacactcaatgatt 16452059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 274 - 501
Target Start/End: Original strand, 27637565 - 27637796
Alignment:
Q  274 gaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactct--nnnnnnnattgattt 368  Q
    ||||||||||||||||||||||| |||||| ||||||   ||||||||| || | |||||||||||||||||||| |||||||         |||||| |    
T  27637565 gaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatattcacccagttcggtccaacaatgacctactctgcaggagagattgatct 27637664  T
Q  369 ctctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    ||| |||||||||  ||||||||| |||||||||||||||||| | ||||||||||||||| || |||||||||   |||||||| |||||||| || ||    
T  27637665 ctccaatccacta-taatgagttc-ttacaaagagatacaaaatgggttacaagaaattagtttaaacaagctcataaagaacaaccctaatttctaccc 27637762  T
Q  468 atttt-tcaatctctttccatgaacaagacactca 501  Q
    ||||| ||||||||   | ||||||||||||||||    
T  27637763 attttctcaatctc-accaatgaacaagacactca 27637796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 13488327 - 13488178
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||    
T  13488327 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 13488229  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||| |  | |||||||||||||||||| |||||||    
T  13488228 tctacccattttcccaatct-taccaatgaacaagacactcaataattttca 13488178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 373 - 511
Target Start/End: Complemental strand, 33831792 - 33831655
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 472  Q
    ||||||||| |||||||||||| ||||||||||||||| | |||||||||||||||||| ||||||||| | ||||||||||||||||| || |||||||    
T  33831792 aatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacccatttt 33831694  T
Q  473 t-caatctctttccatgaacaagacactcaatgattttca 511  Q
    | |||||||     ||||| ||||||||||||||||||||    
T  33831693 tccaatctc-acaaatgaataagacactcaatgattttca 33831655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 42309979 - 42310128
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| || ||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||| | |||    
T  42309979 attgatctcgctaatccactatcaataagttctt-acaaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagatcaaacttgatt 42310077  T
Q  461 tttatcc-atttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || || |||| ||||||||   | |||| |||||||||||||||||||||    
T  42310078 tctacccaatttctcaatctc-accaatgagcaagacactcaatgattttca 42310128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 514 - 644
Target Start/End: Complemental strand, 316705 - 316577
Alignment:
Q  514 tttagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaag 613  Q
    |||| ||||||| ||||||||||||||||||| ||| |||||||||| ||| |||| |||||||||||||||| |||| || || || ||||||||||||    
T  316705 tttaaaatctaacccccaaaagagaaccaacccttagcctttgatttccta-ggattttctcttttggtctcccaagattcacc-aagttgctcacaaag 316608  T
Q  614 actctcatttgatgtgtttccaaaccctatg 644  Q
    |||||| |||||||||||||| |||| ||||    
T  316607 actctcttttgatgtgtttcccaaccttatg 316577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 274 - 472
Target Start/End: Complemental strand, 5058260 - 5058061
Alignment:
Q  274 gaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgattt 368  Q
    ||||||||||||||||||||||| |||||| ||||||   |||||||||||| | |||||||||||||||  ||| |||||||       |  ||||| |    
T  5058260 gaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctagaggagagattgatct 5058162  T
Q  369 ctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcca 468  Q
    ||| ||||||||| |||||||||||| ||||||||||||||| | | ||||||||| |||||||||||||||| |  ||||||| |||||||| || |||    
T  5058161 ctccaatccactatcaatgagttctt-acaaagagatacaaatgggatacaagaaaatagcttcaacaagctcac--agaacaaccctaatttctaccca 5058065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 377 - 511
Target Start/End: Original strand, 10700708 - 10700841
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 476  Q
    ||||| |||||||||||||  ||||||||||||||  |||| ||||| ||||||||||||||||||| ||||||||||||||||| || |  |||| |||    
T  10700708 cactatcaatgagttctttttaaagagatacaaaaatgttataagaa-ttagcttcaacaagctctctaagaacaaacctaatttctaccttttttccaa 10700806  T
Q  477 tctctttccatgaacaagacactcaatgattttca 511  Q
    ||| ||| ||||||||| | |||||||||||||||    
T  10700807 tctattttcatgaacaaaatactcaatgattttca 10700841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 25412884 - 25412736
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||    
T  25412884 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatt 25412786  T
Q  461 tttatccatttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || || |||  |||||||   | ||||||||||||||||||||||||||    
T  25412785 tctacccttttcccaatctc-accaatgaacaagacactcaatgattttca 25412736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 223 - 511
Target Start/End: Original strand, 33905927 - 33906220
Alignment:
Q  223 agatataatctaaaaatcaagtttaaagtaaaaccacaatagaatatcaaagaataaacaagataaagagagtatagaa--------aatataacaccaa 314  Q
    |||| |||||||  |||||||| ||||||||||||||| | |||   ||| ||||||||||||||||||||||||||||        || | ||||| ||    
T  33905927 agatttaatctagcaatcaagtgtaaagtaaaaccacattcgaac--caatgaataaacaagataaagagagtatagaattaaaaaaaaaaaaacacaaa 33906024  T
Q  315 -gaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgatttctctaatccactaccaatgagttctttacaaagagatacaaaa 411  Q
     ||| |||| | |||| ||||||||||| ||| |||||||       |  ||||| | || |||| |||| |||||||||||||||||||||||||||||    
T  33906025 agaattgtttacccagctcggtccaacattgacctactctagggaagagattgatctttccaatctactatcaatgagttctttacaaagagatacaaaa 33906124  T
Q  412 gagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    |  ||||||||| |||||||| |||||||||||||| || |||||||||| || ||||||  |||| |||| |||||    |||||||||||||| ||||    
T  33906125 ggattacaagaagttagcttcgacaagctctccaagcactaacctaatttatacccatttcacaatttcttcccatg----agacactcaatgatgttca 33906220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 213589 - 213479
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | |||||||||||||||||| ||||||||| | |||||||| |||||||    
T  213589 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttaacaagctcacaaagaacaaccctaatt 213491  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  213490 tctacccatttt 213479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 8565990 - 8566139
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||| || |||||||| | |||||||||||||||||| ||||||||| | |||||||||||||| |    
T  8565990 attgatctctccaatccactatcaatgagttctt-acagagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaagt 8566088  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||| ||||||||     ||||||||||||||||||||||||||    
T  8566089 tctacccattttctcaatctc-acaaatgaacaagacactcaatgattttca 8566139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 28278440 - 28278330
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| | |||||||| | |||||    
T  28278440 attgatctctccaatccactatcaatgagtt-tttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccataatt 28278342  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  28278341 tctacccatttt 28278330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 42426279 - 42426428
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||| ||||||||||||||||||||  || | |||||||| |||||||    
T  42426279 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttgcaagaaattagcttcaacaatttcacaaagaacaaccctaatt 42426377  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||| ||||||||   | |||||||||||||||||| |||||||    
T  42426378 tctacccattttctcaatctc-accaatgaacaagacactcaataattttca 42426428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 42428474 - 42428623
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| || | ||||| || | |||||    
T  42428474 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaaaaaccataatt 42428572  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  42428573 tctacccattttcccaatctc-accaatgaacaagacactcaatgattttca 42428623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 5057988 - 5057891
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||| |||||||||||| ||  ||||||||||||| |||||||||||    
T  5057988 tagaatctaacccccaaaagagaaccaacccttagcctttgattttactaaggatcttctcttttggtttcacaagactcgcccaagttgctcacaaa 5057891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 373 - 511
Target Start/End: Complemental strand, 533881 - 533744
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 472  Q
    ||||||||| |||||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||| | |||| ||| |||||||| || |||||||    
T  533881 aatccactatcaatgagttctt-acaaagagatacaaatgggttacaaaaaattagcttcaacaagctcacaaagaccaaccctaatttctacccatttt 533783  T
Q  473 -tcaatctctttccatgaacaagacactcaatgattttca 511  Q
      |||||||   | ||||||||||||| ||||||||||||    
T  533782 cccaatctc-accaatgaacaagacacgcaatgattttca 533744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 538149 - 538000
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| |||| |||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | |||| ||| | |||||    
T  538149 attgatctctccaatctactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagagcaaccttaatt 538051  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||  |  ||||||||||||| ||||||||||||    
T  538050 tctacccattttcccaatctcact-aatgaacaagacacgcaatgattttca 538000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 36074094 - 36074238
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||  ||||| || | |||||||| |||||||| || ||    
T  36074094 tctccaatccactatcaatgagttctt--caaagagatacaaaagagttacaagaaattagctttgacaagttcgcaaagaacaaccctaatttctaccc 36074191  T
Q  468 attttt----caatctctttccatgaacaagacactcaatgattttca 511  Q
     |||||    |||||||   | ||||||||||||||||||||||||||    
T  36074192 ttttttttcccaatctc-accaatgaacaagacactcaatgattttca 36074238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 38747129 - 38747019
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||| ||| ||||||||| ||| |||||||||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||    
T  38747129 attgatctctccaatcctctatcaatgagtt-tttccaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatt 38747031  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  38747030 tctacccatttt 38747019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 361 - 461
Target Start/End: Complemental strand, 37439265 - 37439166
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||  ||||| || | |||||||| |||||||    
T  37439265 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattaactttgacaagttcacaaagaacaaccctaatt 37439167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 13343177 - 13343035
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| ||||||||||||  ||||||||||||||||  |||||||||||||||||  ||||| || | |||||||| |||||||| || ||    
T  13343177 tctccaatccactatcaatgagttctt--caaagagatacaaaaggattacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccc 13343080  T
Q  468 attttt--caatctctttccatgaacaagacactcaatgattttca 511  Q
     |||||  |||||||   | ||||||||||||||||||||||||||    
T  13343079 ttttttcccaatctc-accaatgaacaagacactcaatgattttca 13343035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 516 - 634
Target Start/End: Original strand, 14689639 - 14689756
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagac 615  Q
    ||||||||| ||||||||||||||||||||  || ||||||||||||||||||| || ||||||||| ||| ||||||   | || ||||||||||| ||    
T  14689639 tagaatcta-tccccaaaagagaaccaacccctagcctttgattttctaaggatcttttcttttggtgtcccaagacttatctaagttgctcacaaatac 14689737  T
Q  616 tctcatttgatgtgtttcc 634  Q
    |||| ||| ||||||||||    
T  14689738 tctccttttatgtgtttcc 14689756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 30182705 - 30182563
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| ||||||||||||  |||||||||| ||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || ||    
T  30182705 tctccaatccactatcaatgagttcttc-caaagagatagaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttcta-cc 30182608  T
Q  468 attttt--caatctctttccatgaacaagacactcaatgattttca 511  Q
    ||||||  |||||||   | ||||||||||||||||||||||||||    
T  30182607 atttttcccaatctc-accaatgaacaagacactcaatgattttca 30182563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 40147202 - 40147076
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 613  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||| ||||    
T  40147202 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaag 40147103  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  40147102 actctccactcatgtgtttcccaaccc 40147076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 383 - 460
Target Start/End: Complemental strand, 32579327 - 32579250
Alignment:
Q  383 caatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||| || ||||||||||    
T  32579327 caatgagttatttacaaagacatacataagagttacaagaaattagtttcaataagctctccaaaaataaacctaatt 32579250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 383 - 460
Target Start/End: Complemental strand, 32609638 - 32609561
Alignment:
Q  383 caatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||| ||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| ||||| |||| |||||    
T  32609638 caataagttctttacaaagaaatacaaaagagttacaagaaattaacttcaacaaactctcaaagaataaacttaatt 32609561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 441
Target Start/End: Original strand, 9049386 - 9049465
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctc 441  Q
    |||||| |||| ||||||||  |||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||    
T  9049386 attgatctctccaatccactgtcaatgagttctt-acaaagagatacaaaatggttacaagaaattagcttcaacaagctc 9049465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 368 - 480
Target Start/End: Complemental strand, 16409592 - 16409480
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| ||||||||||||   ||||||||||||||||||||||||||||||| ||  ||||| || | |||||||| |||||||| || ||    
T  16409592 tctccaatccactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaaccctaatttctaccc 16409493  T
Q  468 atttttcaatctc 480  Q
     |||| |||||||    
T  16409492 tttttccaatctc 16409480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 270 - 427
Target Start/End: Complemental strand, 30793352 - 30793195
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataacaccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnnattgatttc 369  Q
    ||||||||||||||||||||||||||| |||||  |  ||||||||||||||| | |  |||||||||||||||||  ||||||       |  ||| ||    
T  30793352 caaagaataaacaagataaagagagtagagaaacaaacacaccaagaaatgtttaccttgttcggtccaacaatgacttactctaggggagagagatctc 30793253  T
Q  370 tctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaatta 427  Q
    || | | ||||| |||| ||||||||||||||||||||||||  ||||||| ||||||    
T  30793252 tccacttcactatcaattagttctttacaaagagatacaaaatggttacaataaatta 30793195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 545 - 633
Target Start/End: Original strand, 33906286 - 33906374
Alignment:
Q  545 cattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtgtttc 633  Q
    ||||| |||||||||| |||||||| |||||||||||| ||| ||||||| ||||| |||||||| ||| ||||| |||||||||||||    
T  33906286 cattagcctttgatttcctaaggatcttctcttttggtttcccaagactcacccaagttgctcactaagtctctcctttgatgtgtttc 33906374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 516 - 611
Target Start/End: Original strand, 16641168 - 16641263
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaa 611  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||| |||| || |||||||||||| ||  ||||||| || || ||| ||||||    
T  16641168 tagaatctaatccccaaaagagaaccaacctttagcctttgattttttaagtatcttctcttttggtttcacaagactcaccaaagttgttcacaa 16641263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 28750699 - 28750848
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||| ||||||| ||||||||| | |||||| ||||||| |||||||||  ||   |||||||| |||||||    
T  28750699 attgatctctccaatccactatcaatgagttc-ttacaaaaagatacaaatgggttacaggaaattaacttcaacaatttcataaagaacaaccctaatt 28750797  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  28750798 tctacccattttcccaatctc-accaatgaacaagacactcaatgattttca 28750848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 31183088 - 31182948
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| |||||| || |||||||||||| |||||| |||||||| | |||||||||||||| ||| ||||| ||| | |||||||| |||||||| || ||    
T  31183088 tctccaatccagtatcaatgagttctt-acaaagggatacaaatg-gttacaagaaattaacttaaacaaactcacaaagaacaatcctaatttctaccc 31182991  T
Q  468 atttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    ||||| |||||||     ||||||||||||||||||||||||||    
T  31182990 attttccaatctc-acaaatgaacaagacactcaatgattttca 31182948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 32636948 - 32636799
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||| |||||||| ||||||||||||||| | ||||||||||||||||||  ||||| || | |||||||| | |||||    
T  32636948 attgatctctccaatccactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccataatt 32636850  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||| ||||||||||||||||||||    
T  32636849 tctacccattttcccaatctc-accaatgaataagacactcaatgattttca 32636799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 394 - 511
Target Start/End: Original strand, 5887492 - 5887609
Alignment:
Q  394 ttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaaca 492  Q
    |||||||| |||||||| | ||| |||||||||||||| ||||||||| | ||||||||| ||||||| |||||||||| ||||||||     |||||||    
T  5887492 ttacaaagtgatacaaatgggttgcaagaaattagcttaaacaagctcacaaagaacaaatctaatttctatccattttctcaatctc-acaaatgaaca 5887590  T
Q  493 agacactcaatgattttca 511  Q
    ||||| |||||||||||||    
T  5887591 agacattcaatgattttca 5887609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 22097980 - 22097889
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||||||||||||| ||||||||| |||||||| ||||||  ||| |||| ||||||||| |||||||||  ||||||||||||| ||||||||    
T  22097980 tctctaatccactatcaatgagttttttacaaatagatac--aagggttataagaaattaacttcaacaaattctccaagaacaaccctaattt 22097889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 27015473 - 27015347
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 613  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| |   ||||||| ||||| |||||||| ||||    
T  27015473 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggttttacaagactcacccaagttgctcacaaaag 27015374  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  27015373 actctccactcatgtgtttcccaaccc 27015347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 26177999 - 26177906
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||| ||||||||| ||||||||||||   ||||||||||||||||||||||||||||||| ||  ||||| || | |||||||| ||||||||    
T  26177999 tctccaatccactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaaccctaattt 26177906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 377 - 466
Target Start/End: Original strand, 32583342 - 32583431
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatc 466  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||   ||||||||||||||| || ||||||||||| | |||||| ||||    
T  32583342 cactatcaatgagttctttacaaaaagatacaaaagagatacacataattagcttcaacaacctttccaagaacaatcataatttctatc 32583431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 480
Target Start/End: Original strand, 18441699 - 18441811
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| ||||||||||||   ||||||||||||||||||||||||||||||| ||  ||||| || | | |||||| |||||||| || ||    
T  18441699 tctccaatccactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaggaacaaccctaatttctaccc 18441798  T
Q  468 atttttcaatctc 480  Q
     |||| |||||||    
T  18441799 tttttccaatctc 18441811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 3075702 - 3075851
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||| ||||| ||| || ||||| ||||| ||||||||| | ||||||||||||||| |||| ||||||| | ||||||||||||||||    
T  3075702 attgatctctccaattcactatcaacgaattctt-acaaaaagatacaaatgggttacaagaaattagattcagcaagctcacaaagaacaaacctaatt 3075800  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || | ||||| ||||||||     |||||| |||||||||||||||||||    
T  3075801 tctacctattttctcaatctc-acaaatgaacgagacactcaatgattttca 3075851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 370 - 437
Target Start/End: Complemental strand, 8445831 - 8445764
Alignment:
Q  370 tctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaa 437  Q
    ||||||| |||| |||| ||||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  8445831 tctaatctactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttcaacaa 8445764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 476
Target Start/End: Original strand, 14689502 - 14689585
Alignment:
Q  393 tttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 476  Q
    |||||||||||||||||||   |||||| |||||||||||||||||| ||||| |||||||| |||||| || | |||||||||    
T  14689502 tttacaaagagatacaaaaatattacaaaaaattagcttcaacaagcactccatgaacaaacataatttctaccaatttttcaa 14689585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 518 - 612
Target Start/End: Complemental strand, 4160571 - 4160477
Alignment:
Q  518 gaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||| ||||||||||||||||||| ||| ||||| |||  |||||||| |||||||||||| ||| |||| || ||| | |||||||||||    
T  4160571 gaatctaacccccaaaagagaaccaacccttagcctttaattacctaaggatcttctcttttggtttcccaagattcaccctagttgctcacaaa 4160477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 361 - 438
Target Start/End: Original strand, 30682966 - 30683044
Alignment:
Q  361 attgatttctctaatccactaccaatgagttct-ttacaaagagatacaaaagagttacaagaaattagcttcaacaag 438  Q
    |||||| |||| ||||||||| ||||||||  | ||||||||| ||||||||| |||||||||||||||||||||||||    
T  30682966 attgatctctccaatccactatcaatgagtattcttacaaagaaatacaaaagggttacaagaaattagcttcaacaag 30683044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 38746946 - 38746849
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||   ||||||| |||||||||||| ||  ||||||| ||||| |||||| ||||    
T  38746946 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcaataaggatcttctcttttggtttcacaagactcacccaagttgctcgcaaa 38746849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 42926968 - 42926916
Alignment:
Q  384 aatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaa 437  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  42926968 aatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaa 42926916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 368 - 428
Target Start/End: Original strand, 9789275 - 9789335
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattag 428  Q
    |||| ||||||||| ||||||||||||   |||||||||||||||||||||||||||||||    
T  9789275 tctccaatccactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattag 9789335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 394 - 454
Target Start/End: Original strand, 16641013 - 16641073
Alignment:
Q  394 ttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaac 454  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||||| | ||||||||||    
T  16641013 ttacaaagagatacaaaagagttatcagaaatcagcttcaacaagctcacaaagaacaaac 16641073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 461
Target Start/End: Complemental strand, 8038292 - 8038221
Alignment:
Q  390 ttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||||| |||| |||||||||||||| |||||| |||||||||| ||||||||||||  ||| ||||||||    
T  8038292 ttctttaaaaagtgatacaaaagagttgcaagaagttagcttcaagaagctctccaagggcaatcctaattt 8038221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 270 - 340
Target Start/End: Complemental strand, 27015741 - 27015669
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatata--acaccaagaaatgttaatccagttcggtccaac 340  Q
    ||||| ||||||||||||||||||||| |||||| |||  ||||||| ||||||| | |||||||||||||||    
T  27015741 caaagcataaacaagataaagagagtaaagaaaaaataacacaccaaaaaatgttcacccagttcggtccaac 27015669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 508
Target Start/End: Complemental strand, 19806449 - 19806361
Alignment:
Q  419 aagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-aatctctttccatgaacaagacactcaatgattt 508  Q
    ||||||||||||||||||| ||| | |||||||| |||||||| || ||||||||| ||||||   | |||||||||||||||||||||||    
T  19806449 aagaaattagcttcaacaaactcacaaagaacaa-cctaatttctacccatttttccaatctcac-caatgaacaagacactcaatgattt 19806361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 213406 - 213284
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 613  Q
    |||||||||| |||||||||||||||     ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||| ||||    
T  213406 tagaatctaacccccaaaagagaaccc----ttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaag 213311  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  213310 actctccactcatgtgtttcccaaccc 213284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 416 - 467
Target Start/End: Complemental strand, 5007621 - 5007569
Alignment:
Q  416 tacaagaaattagcttcaacaagctctccaagaa-caaacctaatttttatcc 467  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||| |||||    
T  5007621 tacaagaaattagctttaacaagctctccaagaataaaacctaatttctatcc 5007569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 388 - 452
Target Start/End: Original strand, 32576368 - 32576431
Alignment:
Q  388 agttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaa 452  Q
    ||||||||| ||||||||||||||  |||| ||| |||||||||||||||||| |||| ||||||    
T  32576368 agttcttta-aaagagatacaaaatggttataagtaattagcttcaacaagctttccatgaacaa 32576431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 434
Target Start/End: Complemental strand, 18470966 - 18470923
Alignment:
Q  391 tctttacaaagagatacaaaagagttacaagaaattagcttcaa 434  Q
    ||||||| |||||||||||||||| ||||| |||||||||||||    
T  18470966 tctttactaagagatacaaaagagctacaaaaaattagcttcaa 18470923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 427 - 461
Target Start/End: Complemental strand, 4160690 - 4160656
Alignment:
Q  427 agcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||||||||||| ||||||||||||||||||||||    
T  4160690 agcttcaacaagttctccaagaacaaacctaattt 4160656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 303
Target Start/End: Original strand, 10700548 - 10700630
Alignment:
Q  219 atctagatataatctaaaaatcaagtttaaagtaaaaccacaatagaatatcaaagaataaacaagataaagagagtatagaaaa 303  Q
    ||||| || |||||||| |||||||| ||||  |||||||||||  |||  |||||||||| |||||||||||| ||| ||||||    
T  10700548 atctatatttaatctaacaatcaagtgtaaatcaaaaccacaatcaaat--caaagaataagcaagataaagagcgtagagaaaa 10700630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 270 - 353
Target Start/End: Complemental strand, 4160819 - 4160733
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataacacca---agaaatgttaatccagttcggtccaacaatgatctactct 353  Q
    ||||||||||||||||||| ||||  |||||||| |||||| ||   | |||| || | |||||| ||||||||||||| |||||||    
T  4160819 caaagaataaacaagataatgagaacatagaaaagataacaacactaataaatatttacccagtttggtccaacaatgacctactct 4160733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 4160953 - 4160886
Alignment:
Q  150 ggtaacttcaaatctcacatcaataaaattgagatttgtgattcaagtatc--tgacaaccaataacc 215  Q
    ||||||| ||||||||||||||||| |||| |||||| ||   ||||||||  |||||||||||||||    
T  4160953 ggtaactccaaatctcacatcaatataatttagatttatggggcaagtatcaatgacaaccaataacc 4160886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 516 - 580
Target Start/End: Complemental strand, 8019526 - 8019464
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttg 580  Q
    |||||||||| |||||||| | |||||||| ||| ||||||||||||||||||| ||| ||||||    
T  8019526 tagaatctaacccccaaaa-ataaccaacc-ttagcctttgattttctaaggatcttcacttttg 8019464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 26170853 - 26170797
Alignment:
Q  405 tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||||||||||||||||||||||| ||  ||||| || | |||||||| ||||||||    
T  26170853 tacaaaagagttacaagaaattagatttgacaagttcacaaagaacaatcctaattt 26170797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 33905832 - 33905895
Alignment:
Q  153 aacttcaaatctcacatcaataaaattgagatttgtgattcaagtatc--tgacaaccaataac 214  Q
    |||| ||||||||||| |||| ||||| ||||||||||  ||||||||  ||||||||||||||    
T  33905832 aactccaaatctcacaccaattaaatttagatttgtgaaacaagtatcaatgacaaccaataac 33905895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 3e-37; HSPs: 103)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 271 - 459
Target Start/End: Complemental strand, 6808672 - 6808479
Alignment:
Q  271 aaagaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttga 365  Q
    |||| ||||||||||||||||||||| | || | | ||||   ||||||||| || ||| ||||||| |||||||| | |||||||       |  ||||    
T  6808672 aaagcataaacaagataaagagagtagaaaacaaagaacaactccaagaaatatttatctagttcggaccaacaataacctactctgaggaagagattga 6808573  T
Q  366 tttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaat 459  Q
    | |||| |||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6808572 tctctccaatccactataaatgagttctttacaaagagatacaaaagagttacaagaagttagcttcaacaagctctccaagaacaaacctaat 6808479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 383 - 633
Target Start/End: Original strand, 12318588 - 12318826
Alignment:
Q  383 caatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctt 482  Q
    |||||||||||| |  |||| ||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||   |||||||     
T  12318588 caatgagttcttaaagaagacatacaaaatggttacaagaaattagcttcaacaagctctccatgaacaaacctaatttctacccatttccaaatctcta 12318687  T
Q  483 tccatgaacaagacactcaatgattttcaattttagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggt 582  Q
     |||||||||||| ||||||||| |||||          || | |||| |||||||||||||| ||| |||||||||| | || ||| |||| |||||||    
T  12318688 cccatgaacaagaaactcaatga-tttca----------ctca-cccccaaagagaaccaacccttagcctttgatttccaaaagattttctattttggt 12318775  T
Q  583 ctcctaagactcgcccaaattgctcacaaagactctcatttgatgtgtttc 633  Q
    |||| ||||||| ||||| ||||||| ||| |||||| |||||||||||||    
T  12318776 ctcccaagactcacccaagttgctcataaaaactctcctttgatgtgtttc 12318826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 307 - 511
Target Start/End: Original strand, 47255328 - 47255532
Alignment:
Q  307 aacaccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgatttctctaatccactaccaatgagttctttacaaagaga 404  Q
    |||||||||||||||| | |||||||||||||||||||| |||||||       |  ||||| |||| ||||||||| |||||||||||| |||||||||    
T  47255328 aacaccaagaaatgttcacccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactatcaatgagttctt-acaaagaga 47255426  T
Q  405 tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt-caatctctttccatgaacaagacactcaat 503  Q
    |||||| | |||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||| |||||||   | ||||||||||||||| ||    
T  47255427 tacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttttccaatctc-accaatgaacaagacactc-at 47255524  T
Q  504 gattttca 511  Q
    ||||||||    
T  47255525 gattttca 47255532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 10925350 - 10925198
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctt--tacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaa 458  Q
    ||||||||||| ||||||||| |||||| |||||  |||||||||||||||| |||||||||||||||||||||||||||||| | |||||||| | |||    
T  10925350 attgatttctccaatccactatcaatgaattcttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccataa 10925251  T
Q  459 tttttatccat-ttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    ||| ||||||| |||||||||||   | ||||||||||||||||||||||||||    
T  10925250 tttctatccattttttcaatctc-accaatgaacaagacactcaatgattttca 10925198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 270 - 472
Target Start/End: Original strand, 13547038 - 13547243
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttg 364  Q
    ||||||||||||||||||||||||||| |||||| ||||||   |||||||||||| | |||||||||||||||  ||| |||||||       |  |||    
T  13547038 caaagaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctggaggagagattg 13547136  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttta 464  Q
    || |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||| | |||||||| |||||||| ||    
T  13547137 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaaatagcttcaacaagctcacaaagaacaaccctaatttcta 13547235  T
Q  465 tccatttt 472  Q
     |||||||    
T  13547236 cccatttt 13547243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 377 - 495
Target Start/End: Original strand, 16914234 - 16914353
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaa-ttagcttcaacaagctctccaagaacaaacctaatttttatccatttttca 475  Q
    ||||| |||||||||||||||||||||||||||||| |||| |||||| |||||||||||| ||||||||||||||||| ||||||||| ||||||  ||    
T  16914234 cactatcaatgagttctttacaaagagatacaaaagggttagaagaaacttagcttcaacaggctctccaagaacaaacataatttttacccatttccca 16914333  T
Q  476 atctctttccatgaacaaga 495  Q
    ||||||| ||||||||||||    
T  16914334 atctcttcccatgaacaaga 16914353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 3156989 - 3156840
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||    
T  3156989 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 3156891  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||| ||||||||   | ||||||||||||||||||||||||||    
T  3156890 tctacccattttctcaatctc-accaatgaacaagacactcaatgattttca 3156840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 361 - 495
Target Start/End: Complemental strand, 22079441 - 22079307
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| |||||| || |||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||| | |||||||||| |||||    
T  22079441 attgatctctccaatccaatatcaatgagttctttacaaagagatacaaaatggttacaagaaattagctttaacaagctcacaaagaacaaacataatt 22079342  T
Q  461 tttatccatttttc-aatctctttccatgaacaaga 495  Q
    | || ||||||||| |||||||| ||||||||||||    
T  22079341 tcta-ccatttttccaatctcttcccatgaacaaga 22079307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 46065042 - 46064893
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| |||||||||  ||||||||||| ||||||||||||| | |||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  46065042 attgatctctccaatccactatgaatgagttctt-acaaagagatacacatgagttacaagaaattagcttcaacgagctcacaaagaacaaacctaatt 46064944  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    ||||||||||||  |||||||     ||||||||||||||||||||||||||    
T  46064943 tttatccattttcccaatctc-acaaatgaacaagacactcaatgattttca 46064893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 49918474 - 49918325
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||    
T  49918474 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 49918376  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||| ||||||||   | ||||||||||||||||||||||||||    
T  49918375 tctacccattttctcaatctc-accaatgaacaagacactcaatgattttca 49918325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 274 - 472
Target Start/End: Complemental strand, 37168513 - 37168311
Alignment:
Q  274 gaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgattt 368  Q
    ||||||||||||||||||||||| |||||| ||||||   |||||||||||| | |||||||||||||||  ||| |||||||       |  ||||| |    
T  37168513 gaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctggaggagagattgatct 37168415  T
Q  369 ctctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    ||| ||||||||| |||||||||||| |||||||||||||||| | |||||||||||||||||| ||||||||| | |||||||| |||||||| || ||    
T  37168414 ctccaatccactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctaccc 37168316  T
Q  468 atttt 472  Q
    |||||    
T  37168315 atttt 37168311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 270 - 472
Target Start/End: Original strand, 13548949 - 13549154
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttg 364  Q
    ||||||||||||||||||||||||||| |||||| ||||||   |||||||||||| | |||||||||||||||  ||| |||||||       |  |||    
T  13548949 caaagaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctggaggagagattg 13549047  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttta 464  Q
    || |||| ||||||||| |||||||||||| ||||||||||||||| | |||||| |||||||| || ||||||||| | |||||||| |||||||| ||    
T  13549048 atctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacatgaaattaggtttaacaagctcacaaagaacaaccctaatttcta 13549146  T
Q  465 tccatttt 472  Q
     |||||||    
T  13549147 cccatttt 13549154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 361 - 508
Target Start/End: Original strand, 9109463 - 9109610
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||| ||||| ||| | |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||| | |||| |||||    
T  9109463 attgatctctccaatacactatcaacgtgttctttacaaagagatacaaaagggttacaagaaattaacttcaacaagttctccaagtaaaaacttaatt 9109562  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattt 508  Q
    | | |||||||| |||||||| | ||||||||||||||||||| |||||    
T  9109563 tct-tccattttctcaatctcctaccatgaacaagacactcaaggattt 9109610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 37282742 - 37282884
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatc 466  Q
    |||| |||||||||| |||||||||||||||||||||| |||||| ||||| | |||||||||||||||||||| | | ||||||| |||||||| || |    
T  37282742 tctccaatccactactaatgagttctttacaaagagatgcaaaagggttaccataaattagcttcaacaagctcacaaggaacaaaccctaatttata-c 37282840  T
Q  467 catttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    |||||||||||||| | | ||||||||||||||||||| ||||||    
T  37282841 catttttcaatctc-tccaatgaacaagacactcaatggttttca 37282884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 8550831 - 8550980
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| |||||| |||||||| |||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  8550831 attgatctctccaatccactatcaatgagttctt-acaaagggatacaaatgagttacaagaaattagcttaaacaagctcacaaagaacaaacctaatt 8550929  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||     ||||||||||||||||||||||||||    
T  8550930 tctacccattttcccaatctc-acaaatgaacaagacactcaatgattttca 8550980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 31659362 - 31659213
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||| ||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | |||||||  |||||||    
T  31659362 attgatctctccaatccactatcaataagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacagccctaatt 31659264  T
Q  461 tttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||||| ||||||   | ||||||||||||||||||||||||||    
T  31659263 tctacccatttttccaatctcac-caatgaacaagacactcaatgattttca 31659213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 361 - 510
Target Start/End: Original strand, 4552681 - 4552829
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| |||||| || |||||||||||| |||||| |||||||| | |||||||||||||||||||||||||||| | ||| ||||||||||||    
T  4552681 attgatctctccaatccattatcaatgagttctt-acaaagggatacaaaggggttacaagaaattagcttcaacaagctcacaaaggacaaacctaatt 4552779  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttc 510  Q
    | || ||||||| ||||||||   | |||||||||||||||||||||||||    
T  4552780 tctacccattttctcaatctc-accaatgaacaagacactcaatgattttc 4552829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 373 - 511
Target Start/End: Original strand, 13138032 - 13138167
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 472  Q
    ||||||||| ||||| |||||| |||||||||| |||| | |||||||||||||||||||||||||||| | ||||||  ||||||||| ||||||||||    
T  13138032 aatccactatcaatgtgttctt-acaaagagatgcaaatgggttacaagaaattagcttcaacaagctcacaaagaac-gacctaatttctatccatttt 13138129  T
Q  473 tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    ||||||||   | ||||||||||||||||||||||||||    
T  13138130 tcaatctc-accaatgaacaagacactcaatgattttca 13138167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 41135760 - 41135636
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagac 615  Q
    |||||||||| ||||||||||||||||| | ||| ||||| |||| | || ||| |||||||||||| ||||||||||| ||||| || |||||||||||    
T  41135760 tagaatctaacccccaaaagagaaccaatccttagcctttaatttccaaatgatcttctcttttggtttcctaagactcacccaagtttctcacaaagac 41135661  T
Q  616 tctcatttgatgtgtttccaaaccc 640  Q
    |||| |||||||||||||| |||||    
T  41135660 tctcctttgatgtgtttcccaaccc 41135636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 377 - 508
Target Start/End: Original strand, 1050503 - 1050634
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 476  Q
    ||||| ||| ||||| |||||||||||| ||||||  ||||||||||||||||||||| |||||||| ||||||| |||||||||| | ||||||  |||    
T  1050503 cactatcaacgagttatttacaaagagacacaaaaatgttacaagaaattagcttcaataagctctcgaagaacacacctaattttcacccatttcccaa 1050602  T
Q  477 tctctttccatgaacaagacactcaatgattt 508  Q
    ||||||  ||||||||||| ||||||| ||||    
T  1050603 tctcttcacatgaacaagagactcaataattt 1050634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 28220270 - 28220419
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||    
T  28220270 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 28220368  T
Q  461 tttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||| | ||||||   | ||||| ||||||||||||||||||||    
T  28220369 tctacccattttccgaatctc-accaatgaataagacactcaatgattttca 28220419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 373 - 511
Target Start/End: Original strand, 50169266 - 50169403
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 472  Q
    ||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||  |||||||| | |||||||| |||||||| || |||||||    
T  50169266 aatccactatcaatgagtactt-acaaagagatacaaatgagttacaagaaattagctttgacaagctcacaaagaacaaccctaatttctacccatttt 50169364  T
Q  473 tc-aatctctttccatgaacaagacactcaatgattttca 511  Q
    || ||||||   | ||||||||||||||||||||||||||    
T  50169365 tccaatctcac-caatgaacaagacactcaatgattttca 50169403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 377 - 511
Target Start/End: Complemental strand, 25652195 - 25652061
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 476  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| || |||| || |||||| || | |||| ||||    
T  25652195 cactatcaaagagttctttacaaagagatacaagagagttacaagaaattagcttcaacaaactctcaaataacacacttaatttctaccaatttctcaa 25652096  T
Q  477 tctctttccatgaacaagacactcaatgattttca 511  Q
    | | ||  ||||||||| | |||||||||||||||    
T  25652095 tattttctcatgaacaaaatactcaatgattttca 25652061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 270 - 511
Target Start/End: Original strand, 31925655 - 31925899
Alignment:
Q  270 caaagaataa-acaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--tt 363  Q
    |||||||||| ||||||||| ||||||| |||||| ||||||   |||||||||||| | | |||||||||||||  ||| |||||||       |  ||    
T  31925655 caaagaataatacaagataacgagagtaaagaaaaaataacaacaccaagaaatgttcacctagttcggtccaact-tgacctactctagaggagagatt 31925753  T
Q  364 gatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttt 463  Q
    ||| |||| ||||||||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | | |||||  |||||||| |    
T  31925754 gatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaacatccctaatttct 31925852  T
Q  464 atccatttttcaatctctttcc-atgaacaagacactcaatgattttca 511  Q
    | ||||||||| | ||||  || ||||||||||||||| ||||||||||    
T  31925853 acccatttttcca-ctctcaccaatgaacaagacactc-atgattttca 31925899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 271 - 461
Target Start/End: Complemental strand, 47115391 - 47115196
Alignment:
Q  271 aaagaataaacaagataaagagagtatagaaaatataacacca---agaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttga 365  Q
    |||| |||||||||||||| |||| | |||||| |||||| ||   ||||||||| | |||||||||||||||||||| |||||||       |  ||||    
T  47115391 aaaggataaacaagataaaaagagcagagaaaagataacaacatcaagaaatgttcacccagttcggtccaacaatgacctactctggagcagagattga 47115292  T
Q  366 tttctctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    | |||| ||||||||| ||||| ||| ||||||||||||||||||| | |||||||||||||||||| ||||||||| | |||||||| ||||||||    
T  47115291 tctctccaatccactatcaatgggtt-tttacaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaattt 47115196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 361 - 474
Target Start/End: Complemental strand, 19754619 - 19754507
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| |||||||||||||||   |||||||||||||||||||||||||||| | |||||||| |||||||    
T  19754619 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatcggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatt 19754521  T
Q  461 tttatccatttttc 474  Q
    | || |||||||||    
T  19754520 tctacccatttttc 19754507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 37503601 - 37503747
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||    ||||||||||||||||||||||||| || | |||||||| |||||||    
T  37503601 attgatctctccaatccactatcaatgagttctt-acaaagagatacaag---gttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 37503696  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    |||| |||||||  |||||||   | ||||||||||||||||||||||||||    
T  37503697 tttacccattttcccaatctc-accaatgaacaagacactcaatgattttca 37503747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 834218 - 834360
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| |||||||||||| |||||| |||||||| | |||||||||||||||||| ||||||||| | |||||||| |||||||| |||||    
T  834218 tctccaatccactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctatcc 834316  T
Q  468 atttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    |||||  |||||||     ||||||||||||||||||||||||||    
T  834317 attttcccaatctc-acaaatgaacaagacactcaatgattttca 834360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 45644398 - 45644548
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaat 459  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| ||||| ||||||||||||||  |||||||| | |||||| |||| ||||    
T  45644398 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttgcaagaaattagctttgacaagctcacaaagaacaaaacttaat 45644496  T
Q  460 ttttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    || |||||||||| ||||||||   | |||||||||||||| |||||||||||    
T  45644497 ttctatccattttctcaatctc-accaatgaacaagacacttaatgattttca 45644548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 193735 - 193587
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||    |||||||| |||||||    
T  193735 attgatctctccaatccactatcaatgagttatt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctaataaagaacaaccctaatt 193637  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||| ||||||||   | ||||||||||||||| ||||||||||    
T  193636 tctacccattttctcaatctc-accaatgaacaagacactc-atgattttca 193587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 219 - 515
Target Start/End: Complemental strand, 2926779 - 2926484
Alignment:
Q  219 atctagatataatctaaaaatcaagtttaaagtaaaaccacaatagaatatcaaagaataaacaagataaagagagtatagaaaatataacacca----a 314  Q
    ||||| || |||||||| |||||||| |||| |||||||| |||  |||  ||||||||||||||||||||||||||| || ||| | |||| ||    |    
T  2926779 atctatatctaatctaacaatcaagtgtaaaataaaaccataattaaat--caaagaataaacaagataaagagagtagagtaaaaagaacaacaccaaa 2926682  T
Q  315 gaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgatttctctaatccactaccaatgagttctttacaaagagatacaaaag 412  Q
    ||| |||| | | |||||||| ||||||||| |||||||       |  ||||| |||| |||||||||||||||| ||| || ||||||||| |||||     
T  2926681 gaattgtttacctagttcggtgcaacaatgacctactctgcagaagagattgatctctccaatccactaccaatgaattcgtttcaaagagatgcaaaaa 2926582  T
Q  413 agttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt-caatctctttccatgaacaagacactcaatgattttca 511  Q
     ||||||| |||||| ||| |||||| ||| |||| ||||||||||||| || |||||||| |||||     |||| || |||||||||||| |||||||    
T  2926581 ggttacaataaattaactttaacaagttcttcaagcacaaacctaatttcta-ccatttttccaatc-----ccataaataagacactcaataattttca 2926488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 3189454 - 3189305
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||| |||||||||||||||||| |||||||||||||||||| || | |||||||| |||||||    
T  3189454 attgatctctccaatccactatcaatgagttctt-acaaaaagatacaaaagagttacaggaaattagcttcaacaagttcacaaagaacaaccctaatt 3189356  T
Q  461 tttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 511  Q
    | || || |||| | ||||||   | |||||||||||||||| |||||||||    
T  3189355 tataccctttttccaaatctc-accaatgaacaagacactcagtgattttca 3189305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 3198271 - 3198122
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||| |||||||||||||||||| |||||||||||||||||| || | |||||||| |||||||    
T  3198271 attgatctctccaatccactatcaatgagttctt-acaaaaagatacaaaagagttacaggaaattagcttcaacaagttcacaaagaacaaccctaatt 3198173  T
Q  461 tttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 511  Q
    | || || |||| | ||||||   | |||||||||||||||| |||||||||    
T  3198172 tataccctttttccaaatctc-accaatgaacaagacactcagtgattttca 3198122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 3207110 - 3206961
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||| |||||||||||||||||| |||||||||||||||||| || | |||||||| |||||||    
T  3207110 attgatctctccaatccactatcaatgagttctt-acaaaaagatacaaaagagttacaggaaattagcttcaacaagttcacaaagaacaaccctaatt 3207012  T
Q  461 tttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 511  Q
    | || || |||| | ||||||   | |||||||||||||||| |||||||||    
T  3207011 tataccctttttccaaatctc-accaatgaacaagacactcagtgattttca 3206961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 377 - 511
Target Start/End: Complemental strand, 15820415 - 15820282
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccat-ttttca 475  Q
    ||||| |||||||||||| | ||||||||||||| | |||||||||||||||||||||||||||| | |||||||||||||||||||| |||| ||| ||    
T  15820415 cactatcaatgagttcttaa-aaagagatacaaatgtgttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttttacccatctttcca 15820317  T
Q  476 atctctttccatgaacaagacactcaatgattttca 511  Q
    || ||   | | ||||||||||||||||||||||||    
T  15820316 atatc-accaaagaacaagacactcaatgattttca 15820282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 28265598 - 28265747
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||| |||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | | |||||| |||||||    
T  28265598 attgatctctccaatccactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaacaaccctaatt 28265696  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || | |||||  |||||||   | ||||||||||||||||||||||||||    
T  28265697 tctacctattttcccaatctc-gccaatgaacaagacactcaatgattttca 28265747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 41361038 - 41360928
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| ||| |||||||||| ||| |||||||| ||||||||||||||| | ||||||||||||||| |||||||||||| | ||||||||||||||||    
T  41361038 attgatctctttaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaacctaatt 41360940  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  41360939 tctacccatttt 41360928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 44455284 - 44455135
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||| || | |||||||| |||||||    
T  44455284 attgatctctccaatccactatcaatgagttctt-acaaaaagatacaaatgagttacaagaaattagtttcaacaagttcacaaagaacaaccctaatt 44455186  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||| ||||||    
T  44455185 tctacccattttcccaatctc-accaatgaacaagacactcaatggttttca 44455135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 19752810 - 19752661
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||| ||| |||||||||||| |||||||||||||||   |||||||||||||||||||||||||||| | |||||||| |||||||    
T  19752810 attgatctctccaatcctctatcaatgagttctt-acaaagagatacaaatcggttacaagaaattagcttcaacaagctcgcaaagaacaaccctaatt 19752712  T
Q  461 tttatccatttt--tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  ||||||||   | ||||||||||||||| ||||||||||    
T  19752711 tctacccattttactcaatctc-accaatgaacaagacactc-atgattttca 19752661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 196959 - 197101
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| |||||||||||| |||||| |||||||| |||||||||||||||| ||| ||||||||| | |||||||| |||||||| || |     
T  196959 tctccaatccactatcaatgagttctt-acaaagggatacaaatgagttacaagaaattaacttaaacaagctcacaaagaacaaccctaatttctacca 197057  T
Q  468 atttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    ||||| ||||||||     ||||||||||||||||||||||||||    
T  197058 attttctcaatctc-acaaatgaacaagacactcaatgattttca 197101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 361 - 461
Target Start/End: Complemental strand, 11348822 - 11348723
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| | ||||||||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||    
T  11348822 attgatctctccaatccactatcaatgagttctt-agaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatt 11348724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 373 - 461
Target Start/End: Original strand, 42298031 - 42298118
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | || ||||| ||||||||    
T  42298031 aatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaaaaacaaccctaattt 42298118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 368 - 455
Target Start/End: Original strand, 928027 - 928113
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc 455  Q
    ||||||||||||||  |||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||||||    
T  928027 tctctaatccactattaatgagtt-tttacaaagagatccaaaagggttacaagaaattagcttcaacaagctcacaaagaacaaacc 928113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 1833646 - 1833497
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| |||||||||||| |||||||||| |   || | |||||||| |||||||    
T  1833646 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaatttagcttcaatagattcacaaagaacaaccctaatt 1833548  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  1833547 tctacccattttcccaatctc-accaatgaacaagacactcaatgattttca 1833497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 378 - 461
Target Start/End: Original strand, 4535541 - 4535624
Alignment:
Q  378 actaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||| |||||||||||||||||||||||||||||  |||||||||||||  |||||| ||||||||||||||||||| ||||||    
T  4535541 actatcaatgagttctttacaaagagatacaaaaatgttacaagaaattgacttcaataagctctccaagaacaaacttaattt 4535624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 28223465 - 28223614
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| ||   |||| ||| | |||||    
T  28223465 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcagaaagatcaaccataatt 28223563  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  28223564 tctacccattttcccaatctc-accaatgaacaagacactcaatgattttca 28223614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 368 - 474
Target Start/End: Original strand, 23555316 - 23555421
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| |||||||||||| ||||||||||||||| |||||| |||||||||| ||||||||| || | |||||||| |||||||| || ||    
T  23555316 tctccaatccactatcaatgagttctt-acaaagagatacaaatgagttataagaaattagtttcaacaagttcacaaagaacaaccctaatttctaccc 23555414  T
Q  468 atttttc 474  Q
    |||||||    
T  23555415 atttttc 23555421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 274 - 471
Target Start/End: Original strand, 7482183 - 7482384
Alignment:
Q  274 gaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgattt 368  Q
    ||||||||||||||||||||||| |||||| || |||   ||| |||||||| | | |||||||||||||  ||| |||||||       |  ||||| |    
T  7482183 gaataaacaagataaagagagtaaagaaaagatgacaataccatgaaatgttcacctagttcggtccaact-tgacctactctgaaggagagattgatct 7482281  T
Q  369 ctctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    ||| ||| ||||| |||||||||||| |||||||||||||||| | |||||||||||||||||| ||||||||| | |||||||| |||||||| || ||    
T  7482282 ctccaattcactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctaccc 7482380  T
Q  468 attt 471  Q
    ||||    
T  7482381 attt 7482384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 20762796 - 20762646
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| || |||||||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||    
T  20762796 attgatctctccaatccactatcaatgagttctt-acgaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatt 20762698  T
Q  461 tttatccatttt--tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || || ||||  ||||||||   | |||||||||| |||||||||||||||    
T  20762697 tctacccttttttctcaatctc-accaatgaacaagatactcaatgattttca 20762646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 270 - 472
Target Start/End: Complemental strand, 29136467 - 29136261
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaat---ataacaccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttg 364  Q
    ||||| ||||||||||||||||||||| ||||||    | | |||||||||||||| | | ||||||||||||   ||| |||||||       |  |||    
T  29136467 caaaggataaacaagataaagagagtagagaaaaatagacagcaccaagaaatgttcacctagttcggtccaaacttgacctactctggaggagagattg 29136368  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttta 464  Q
    || |||| ||||||| | |||||||||||| ||||||| ||||||| | ||| |||||||||||||||||||||||| | |||||||| |||||||| ||    
T  29136367 atctctccaatccacgatcaatgagttctt-acaaagaaatacaaatgggttccaagaaattagcttcaacaagctcacaaagaacaaccctaatttcta 29136269  T
Q  465 tccatttt 472  Q
     |||||||    
T  29136268 cccatttt 29136261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 19754435 - 19754306
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatt----ttctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-a 610  Q
    |||||||||| |||||||||||||||||||||||||||||||||    || ||||||| |||||||||||| ||  ||||||| ||||| |||||||| |    
T  19754435 tagaatctaacccccaaaagagaaccaaccattatcctttgatttcacttataaggattttctcttttggtttcacaagactcacccaagttgctcacaa 19754336  T
Q  611 aagactctcatttgatgtgtttccaaaccc 640  Q
    |||||||||   | |||||||||| |||||    
T  19754335 aagactctccactcatgtgtttcccaaccc 19754306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 516 - 612
Target Start/End: Original strand, 34602567 - 34602663
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| | ||||||||||||||||| ||| |||||||||| |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  34602567 tagaatctaacctccaaaagagaaccaacccttagcctttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 34602663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 34603516 - 34603420
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| | ||||||||||||||||| ||| |||||||||| |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  34603516 tagaatctaacctccaaaagagaaccaacccttagcctttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 34603420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 13659380 - 13659529
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||| ||| | || ||||||||||||||||||||||||  | || ||||| |||||||    
T  13659380 attgatctctccaatccactatcaatgagttctt-acaaagagatataaatgggtaacaagaaattagcttcaacaagcttacaaaaaacaaccctaatt 13659478  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | ||||| ||||  |||||||     ||||||||||||||||||||||||||    
T  13659479 tctatccgttttcccaatctc-acaaatgaacaagacactcaatgattttca 13659529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 16455745 - 16455597
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||| ||||||||||| | ||||||||||||||||||||||||||||  | |||| ||| ||||||    
T  16455745 attgatctctccaatccactatcaatgagttctt-acacagagatacaaatgggttacaagaaattagcttcaacaagctc-actagaaaaaatctaatt 16455648  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | |  |||||||  |||||||   | ||||||||||||||||||||||||||    
T  16455647 tctcaccattttaccaatctc-accaatgaacaagacactcaatgattttca 16455597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 50167219 - 50167368
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||  |||||||| | || ||||| |||||||    
T  50167219 attgatctctccaatccactatcaatgagtt-tttacaaagagatacaaatgggttacaagaaattagctttgacaagctcacaaataacaaccctaatt 50167317  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | ||   |||||  |||||||   | ||||||||||||||||||||||||||    
T  50167318 tctactaattttcccaatctc-accaatgaacaagacactcaatgattttca 50167368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 47115112 - 47114986
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 613  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||   ||||||| |||||||||||| ||  ||||||| ||||| |||||||| ||||    
T  47115112 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcattaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaag 47115013  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||  || |||||||||| |||||    
T  47115012 actctccattcatgtgtttcccaaccc 47114986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 361 - 454
Target Start/End: Complemental strand, 3460821 - 3460728
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaac 454  Q
    |||||| |||| |||| |||| ||||  |||||||||||||| ||||||||| ||||||| |||||||||||||||||||| | ||||||||||    
T  3460821 attgatctctccaatcgactatcaatatgttctttacaaagatatacaaaagggttacaataaattagcttcaacaagctcacaaagaacaaac 3460728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 11348639 - 11348542
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  11348639 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 11348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 516 - 612
Target Start/End: Original strand, 31925933 - 31926030
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||| ||  ||| ||| ||||| |||||||||||    
T  31925933 tagaatctaacccccaaaagagaaccaaccattagcctttgatttcactaaggatcttctcttttggtttcacaagtctcacccaagttgctcacaaa 31926030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 32471578 - 32471486
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||| ||||||||| |||||||||  ||||||||||||||||||||||| ||| |||||| ||||||| || |||| |||||||||||||||||    
T  32471578 tctcgaatccactatcaatgagtttcttacaaagagatacaaaagagttgcaataaattaacttcaac-agttctcaaagaacaaacctaattt 32471486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 368 - 472
Target Start/End: Original strand, 37033123 - 37033227
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagag-ttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatc 466  Q
    |||| ||||||||| |||||||||||| |||||||||| |||||  | ||||||||||||||||||||||||||| | |||||||| |||||||| || |    
T  37033123 tctccaatccactatcaatgagttctt-acaaagagatgcaaaatggattacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacc 37033221  T
Q  467 catttt 472  Q
    ||||||    
T  37033222 catttt 37033227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 373 - 449
Target Start/End: Original strand, 2263030 - 2263106
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaa 449  Q
    ||||||||| |||| ||||||||||||| ||||| ||||| |||||||||||||| ||||||||||||| |||||||    
T  2263030 aatccactatcaataagttctttacaaaaagatataaaagggttacaagaaattatcttcaacaagctcaccaagaa 2263106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 368 - 495
Target Start/End: Complemental strand, 13938255 - 13938128
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaaga-gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatc 466  Q
    |||| ||||||||| |||||||||  |||||||||||||||||| | ||||||||||||||  ||  ||||| ||||||||||| |||||||||| || |    
T  13938255 tctccaatccactatcaatgagtttcttacaaagagatacaaaaaaggttacaagaaattatattttacaagttctccaagaac-aacctaatttctacc 13938157  T
Q  467 catttttcaatctctttccatgaacaaga 495  Q
    |||||  ||||||||| ||| ||||||||    
T  13938156 catttcccaatctcttcccacgaacaaga 13938128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 37559912 - 37560062
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagc-ttcaacaagctctccaagaacaaacctaat 459  Q
    |||||| |||| ||| ||||| ||| |||||||| ||||||||||||||| | |||||||||||||||| ||||||||| || | ||||||||  |||||    
T  37559912 attgatctctccaattcactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagctttcaacaagttcacaaagaacaactctaat 37560010  T
Q  460 ttttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 511  Q
    || || ||||||| | ||||||   | ||||||||||||||||||||||||||    
T  37560011 ttctacccattttcctaatctc-accaatgaacaagacactcaatgattttca 37560062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 644
Target Start/End: Complemental strand, 28242329 - 28242199
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 613  Q
    |||||||||| ||| |||||||||||||||  || ||||||||||  ||||||||||||||||||||| ||  ||||||| ||||| ||||||||||| |    
T  28242329 tagaatctaacccctaaaagagaaccaacccatagcctttgatttcactaaggatattctcttttggtttcacaagactcacccaagttgctcacaaatg 28242230  T
Q  614 actctcatttgatgtgtttccaaaccctatg 644  Q
    ||||||   | |||||||||| |||| ||||    
T  28242229 actctccactcatgtgtttcccaaccttatg 28242199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 276 - 353
Target Start/End: Complemental strand, 28242518 - 28242438
Alignment:
Q  276 ataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactct 353  Q
    ||||||||||||||||||||| |||||| ||||||   |||||||||||| | |||||||||||||||||||| |||||||    
T  28242518 ataaacaagataaagagagtagagaaaagataacaacaccaagaaatgttcacccagttcggtccaacaatgacctactct 28242438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 501
Target Start/End: Complemental strand, 34603689 - 34603561
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcca-tt 470  Q
    ||||||| | |||||||||||| ||||||||||| |||| | |||||||||||||||||| ||||||||| | |||||||| |||||||| || ||| ||    
T  34603689 aatccaccatcaatgagttctt-acaaagagataaaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctacccattt 34603591  T
Q  471 tttcaatctctttccatgaacaagacactca 501  Q
    ||||||||||   | ||||||||||||||||    
T  34603590 tttcaatctc-accaatgaacaagacactca 34603561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 193552 - 193455
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  |||||||  |||| |||||||||||    
T  193552 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcatccaagttgctcacaaa 193455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 7482459 - 7482583
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaaga 614  Q
    |||||||||| ||||||||||||||||||| ||| | |||||||| |||||||| ||||||||| || ||  ||||||| ||||| |||||||| |||||    
T  7482459 tagaatctaacccccaaaagagaaccaacccttagc-tttgatttcctaaggatcttctctttttgtttcacaagactcacccaagttgctcacaaaaga 7482557  T
Q  615 ctctcatttgatgtgtttccaaaccc 640  Q
    |||||   | |||||||||| |||||    
T  7482558 ctctccactcatgtgtttcccaaccc 7482583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 13316403 - 13316495
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||| ||||||||| ||||||||||||  |||||||||||||||| ||||||||||||||||||  ||||| || | |||||||| ||||||||    
T  13316403 tctccaatccactatcaatgagttcttc-caaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaattt 13316495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 29136188 - 29136091
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| |||||||||||||| |||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  29136188 tagaatctaacccccaaaagagaactaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 29136091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 387 - 508
Target Start/End: Complemental strand, 41135919 - 41135798
Alignment:
Q  387 gagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttcca 486  Q
    |||||||||||||| |||||||||||  ||||||||||||| |||||| ||| ||| |||||||||| ||||||| || || ||||  | |||| |  ||    
T  41135919 gagttctttacaaatagatacaaaaggtttacaagaaattaacttcaaaaagttcttcaagaacaaatctaatttctaccctttttctattctcctcaca 41135820  T
Q  487 tgaacaagacactcaatgattt 508  Q
     |||||||| ||||||||||||    
T  41135819 ggaacaagagactcaatgattt 41135798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 3847172 - 3847314
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| |||||||||| |||||||| |||||||| | ||||||| || ||||||| ||||| ||| | |||||||| |||||||| || ||    
T  3847172 tctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttacaaaaatttagcttaaacaaactcacaaagaacaaccctaatttctaccc 3847270  T
Q  468 atttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    |||||  |||||||     ||||||||||||||||||||||||||    
T  3847271 attttcccaatctc-acaaatgaacaagacactcaatgattttca 3847314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 5460111 - 5459956
Alignment:
Q  282 aagataaagagagtatagaaaatataacaccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgatttctctaatccac 379  Q
    ||||||||||||| |||||||  |  ||| ||||||||||| | | ||||| | ||||||||||||||||||       |  ||||| |||| |||| ||    
T  5460111 aagataaagagagaatagaaacaaacacaacaagaaatgtttacctagttcagcccaacaatgatctactctagatgagagattgatctctccaatctac 5460012  T
Q  380 taccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaaca 436  Q
    || |||||||||||||||||||| ||| ||||  |||||||||||||||||||||||    
T  5460011 tatcaatgagttctttacaaagaaatataaaa-tgttacaagaaattagcttcaaca 5459956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 361 - 474
Target Start/End: Original strand, 40122240 - 40122354
Alignment:
Q  361 attgatttctctaatccactac--caatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaa 458  Q
    |||||| ||||||||||||||   ||| |||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||| | ||||||||| ||||    
T  40122240 attgatctctctaatccactatatcaaagagttctt-acaaagtgatacaaatgagttataagaaattagcttaaacaagctcacaaagaacaaatctaa 40122338  T
Q  459 tttttatccatttttc 474  Q
    |||  | |||||||||    
T  40122339 tttcgacccatttttc 40122354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 373 - 511
Target Start/End: Original strand, 44650218 - 44650356
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc-taatttttatccattt 471  Q
    |||||||||  ||||| || |||||||||||||| |||||| |||||| |||||||| | ||||| ||| | ||||||||||| |||||||||    |||    
T  44650218 aatccactattaatgaattatttacaaagagatataaaagatttacaataaattagcgttaacaaactcacaaagaacaaaccataatttttacattttt 44650317  T
Q  472 ttcaatctctttccatgaacaagacactcaatgattttca 511  Q
     |||||||| | | |||||||||||||||||| |||||||    
T  44650318 ctcaatctc-tccaatgaacaagacactcaataattttca 44650356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 37168238 - 37168112
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 613  Q
    |||||||||| ||||||||||||| ||||| ||| ||||||||||  |||||||| ||||||||| || ||  ||||||| ||||| |||||||| ||||    
T  37168238 tagaatctaacccccaaaagagaatcaacctttagcctttgatttcactaaggatcttctcttttagtttcacaagactcacccaagttgctcacaaaag 37168139  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  37168138 actctccactcatgtgtttcccaaccc 37168112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 37879138 - 37879264
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 613  Q
    |||||||||| ||||||||||||||||| | ||| ||||||||||  |||||||| |||||||||| | ||  ||||||| ||||| |||||||| ||||    
T  37879138 tagaatctaacccccaaaagagaaccaatccttagcctttgatttcactaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaaag 37879237  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  37879238 actctccactcatgtgtttcccaaccc 37879264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 612
Target Start/End: Original strand, 13547316 - 13547413
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  ||||| || |||||||||||| ||  |||| || ||||| |||||||||||    
T  13547316 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagtatcttctcttttggtttcacaagattcacccaagttgctcacaaa 13547413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 612
Target Start/End: Original strand, 13549227 - 13549324
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  ||||| || |||||||||||| ||  |||| || ||||| |||||||||||    
T  13549227 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagtatcttctcttttggtttcacaagattcacccaagttgctcacaaa 13549324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 19752626 - 19752529
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||| ||||| ||||||||||  |||||||| |||||||||||| ||  |||||||  | || |||||||||||    
T  19752626 tagaatctaacccccaaaagagaaccaatcattagcctttgatttcactaaggatcttctcttttggtttcacaagactcatctaagttgctcacaaa 19752529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 612
Target Start/End: Original strand, 37033300 - 37033397
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||| |||||||||||||||  || ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  37033300 tagaatctaaccccaaaaagagaaccaacccatagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 37033397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 461
Target Start/End: Original strand, 1485843 - 1485914
Alignment:
Q  390 ttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||||| ||| ||||||||||| ||||||||||||||  |||||||||| ||||||||| || ||||||||    
T  1485843 ttctttataaatagatacaaaagggttacaagaaattatattcaacaagcactccaagaaaaatcctaattt 1485914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 6398763 - 6398621
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||| ||||| |||||||||  ||||||||| |||| ||||||  | ||| ||||| | |||| ||| ||||||||||| |||||||||| ||  |    
T  6398763 tctccaattcactatcaatgagtttcttacaaagatatactaaagagaaaaaagtaattaacctcaataagttctccaagaac-aacctaatttctactc 6398665  T
Q  468 atttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    ||||  ||||||||| |||||||||||| |||||  ||||||||    
T  6398664 atttcccaatctcttcccatgaacaagaaactcacagattttca 6398621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 389 - 508
Target Start/End: Complemental strand, 33776006 - 33775887
Alignment:
Q  389 gttctttacaaagagat-acaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc--aatctctttcc 485  Q
    ||||||||||||||||| |||||||| |||||| ||||||||||||| ||| ||||||||| ||| |||||||| ||| ||||||||  ||| || ||||    
T  33776006 gttctttacaaagagattacaaaaga-ttacaaaaaattagcttcaagaagttctccaagagcaatcctaatttctat-catttttctgaatatc-ttcc 33775910  T
Q  486 atgaacaagacactcaatgattt 508  Q
     ||| ||||| ||||||||||||    
T  33775909 gtgaccaagagactcaatgattt 33775887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 634
Target Start/End: Complemental strand, 22079261 - 22079144
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagac 615  Q
    |||||||||| |||||||||||||| | || ||| ||||||||||  |||| || || | ||||||| | | ||||||| || || ||||||||||||||    
T  22079261 tagaatctaacccccaaaagagaacaatcc-ttagcctttgatttcataagcatcttatattttggtttgccaagactcacctaagttgctcacaaagac 22079163  T
Q  616 tctcatttgatgtgtttcc 634  Q
    ||||  |||||||||||||    
T  22079162 tctcccttgatgtgtttcc 22079144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 42298202 - 42298328
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 613  Q
    |||||||||| ||||||||||||||||||  ||| ||||||||||  || ||||| |||||||||||| ||  ||||||| ||||| |||||| |||| |    
T  42298202 tagaatctaacccccaaaagagaaccaactcttagcctttgatttcacttaggatcttctcttttggtttcacaagactcacccaagttgctcgcaaatg 42298301  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  42298302 actctccactcatgtgtttcccaaccc 42298328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 373 - 461
Target Start/End: Original strand, 30476502 - 30476589
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||||| || |||||||||||| ||||||||||||||| | ||||||| |||||| |||||||||| ||   |||||||| ||||||||    
T  30476502 aatccagtatcaatgagttctt-acaaagagatacaaatgggttacaataaattatcttcaacaagttcataaagaacaaccctaattt 30476589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 372 - 495
Target Start/End: Complemental strand, 30670207 - 30670084
Alignment:
Q  372 taatccactaccaatgagttctttacaaagagatacaaaaga-gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatt 470  Q
    ||||||| || |||||| ||  |||||||||||||||||||| | ||||| ||||||||||||||||  ||||||| ||| |||||||||| ||   |||    
T  30670207 taatccagtatcaatgactttcttacaaagagatacaaaagacgatacaaaaaattagcttcaacaaattctccaaaaac-aacctaatttctacatatt 30670109  T
Q  471 tttcaatctctttccatgaacaaga 495  Q
    |   |||||| ||||||||||||||    
T  30670108 tcgaaatctccttccatgaacaaga 30670084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 36683771 - 36683715
Alignment:
Q  405 tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||||| |||||||||||||||||||||||||| ||| | ||||| |||||||||||    
T  36683771 tacaaatgagttacaagaaattagcttcaacaaactcacaaagaataaacctaattt 36683715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 461
Target Start/End: Original strand, 37879007 - 37879054
Alignment:
Q  414 gttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||||||||||||||||||||||||||| | |||||||| ||||||||    
T  37879007 gttacaagaaattagcttcaacaagctcacaaagaacaaccctaattt 37879054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 582
Target Start/End: Original strand, 47255567 - 47255634
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggt 582  Q
    |||||||||| ||||||||||||||||||| |||  |||||||||  |||||||| ||||||||||||    
T  47255567 tagaatctaacccccaaaagagaaccaacccttagtctttgatttcactaaggatcttctcttttggt 47255634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 446
Target Start/End: Original strand, 38746786 - 38746847
Alignment:
Q  387 gagttctttacaaagagata--caaaagagttacaagaaattagcttcaacaagctctccaa 446  Q
    ||||||||||||||||||||  ||||| |||||||||||||||| ||||| || ||||||||    
T  38746786 gagttctttacaaagagatatacaaaaaagttacaagaaattagtttcaataaactctccaa 38746847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 276 - 340
Target Start/End: Original strand, 37876721 - 37876788
Alignment:
Q  276 ataaacaagataaagagagtatagaaaatat---aacaccaagaaatgttaatccagttcggtccaac 340  Q
    ||||||||||||||||||||| |||||| ||   |||||||||||||||| | |||||||||| ||||    
T  37876721 ataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggttcaac 37876788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 540 - 639
Target Start/End: Original strand, 9109653 - 9109753
Alignment:
Q  540 ccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-gactctcatttgatgtgtttccaaac 638  Q
    ||||||||||  ||||||||  || | ||| |||| ||||| | ||| |||||||  |||||||||||||||| |||||||||||||||||| ||| |||    
T  9109653 ccaaccattagtctttgattacctcatgatcttctattttgatttcccaagactcatccaaattgctcacaaaagactctcatttgatgtgtctcccaac 9109752  T
Q  639 c 639  Q
    |    
T  9109753 c 9109753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 431
Target Start/End: Complemental strand, 51765514 - 51765450
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagctt 431  Q
    |||| ||||||||| ||||||||||||   |||||||||||||| | ||||||||||||||||||    
T  51765514 tctccaatccactatcaatgagttcttacaaaagagatacaaaaggggttacaagaaattagctt 51765450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 410 - 452
Target Start/End: Original strand, 43342389 - 43342431
Alignment:
Q  410 aagagttacaagaaattagcttcaacaagctctccaagaacaa 452  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||    
T  43342389 aagagttacaagaaattagattcaacaagttctctaagaacaa 43342431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 502
Target Start/End: Complemental strand, 41053378 - 41053280
Alignment:
Q  409 aaagagttacaagaaatta----gcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 502  Q
    |||||||||||||||||||    | || |||||||||||||||||||| |||||||| ||||  |||| | ||||||||  ||||| ||||| ||||||    
T  41053378 aaagagttacaagaaattaataagttttaacaagctctccaagaacaaccctaatttgtatcatttttatgaatctcttctcatgatcaagagactcaa 41053280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 399 - 455
Target Start/End: Original strand, 8871129 - 8871185
Alignment:
Q  399 aagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc 455  Q
    ||||| |||||||  |||||||||||||||||||||| | ||| | |||||||||||    
T  8871129 aagagttacaaaatggttacaagaaattagcttcaacgaactcacaaagaacaaacc 8871185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 271 - 340
Target Start/End: Complemental strand, 19754712 - 19754641
Alignment:
Q  271 aaagaataaacaagataaagagagtatagaaaatata--acaccaagaaatgttaatccagttcggtccaac 340  Q
    |||| ||||||||||||||||||||| |||||| |||  ||||||| || |||| | ||| |||||||||||    
T  19754712 aaaggataaacaagataaagagagtaaagaaaagataacacaccaaaaattgttgacccacttcggtccaac 19754641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 447
Target Start/End: Original strand, 27558335 - 27558394
Alignment:
Q  387 gagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaag 447  Q
    |||||||| ||||| ||||||||  ||||||||||||||| | ||||| ||||||||||||    
T  27558335 gagttcttcacaaaaagatacaat-gagttacaagaaatttgattcaataagctctccaag 27558394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 34603778 - 34603742
Alignment:
Q  274 gaataaacaagataaagagagtatagaaaatataaca 310  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  34603778 gaataaacaagataaagagagtaaagaaaagataaca 34603742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 1e-36; HSPs: 89)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 271 - 454
Target Start/End: Original strand, 22328339 - 22328527
Alignment:
Q  271 aaagaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttga 365  Q
    |||||||||||||||||||||||||| |||||| ||||||   |||| |||| || | |||||||||||||||||||| |||||||       |  ||||    
T  22328339 aaagaataaacaagataaagagagtagagaaaagataacaacaccaaaaaatatttacccagttcggtccaacaatgacctactctaggggagagattga 22328438  T
Q  366 tttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaac 454  Q
    | |||| |||||||||  ||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  22328439 tctctcaaatccactattaatgacttccttgcaaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagaacaaac 22328527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 270 - 472
Target Start/End: Complemental strand, 29608956 - 29608751
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnn--attg 364  Q
    ||||| ||||||||||||||||||||| |||||| ||||||   ||||||||| || |  ||||||||||||||  ||| |||||||         ||||    
T  29608956 caaaggataaacaagataaagagagtagagaaaagataacaacaccaagaaatattcactcagttcggtccaact-tgacctactctggaggagtgattg 29608858  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttta 464  Q
    || |||| ||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | |||||||| |||||||| ||    
T  29608857 atatctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttcta 29608759  T
Q  465 tccatttt 472  Q
     |||||||    
T  29608758 cccatttt 29608751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 47673987 - 47674136
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||    
T  47673987 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 47674085  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||| ||||||||   | ||||||||||||||||||||||||||    
T  47674086 tctacccattttctcaatctc-accaatgaacaagacactcaatgattttca 47674136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 270 - 472
Target Start/End: Original strand, 8359264 - 8359471
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttg 364  Q
    ||||| ||||||||||||| ||||||| |||||| ||||||   |||||||||||| | |||||||||||||||||||| |||||||       |  |||    
T  8359264 caaaggataaacaagataatgagagtagagaaaagataacaacaccaagaaatgttcacccagttcggtccaacaatgacctactctggaggagagattg 8359363  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttt 463  Q
    || |||| ||||||||| |||||||||||| |||||||||||||||| | ||||||||||||||| || ||||||||| | ||||| || |||||||| |    
T  8359364 atctctccaatccactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagtttaaacaagctcacaaagaaaaaccctaatttct 8359462  T
Q  464 atccatttt 472  Q
    | |||||||    
T  8359463 acccatttt 8359471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 274 - 472
Target Start/End: Original strand, 48599287 - 48599488
Alignment:
Q  274 gaataaacaagataaagagagtatagaaaatataacacca---agaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgattt 368  Q
    ||||||||||||||||||||||| |||||| |||||| ||   ||||||||| | |||||||||||||||  |||||| ||||       |  ||||| |    
T  48599287 gaataaacaagataaagagagtaaagaaaagataacaacatcaagaaatgttcacccagttcggtccaact-tgatctgctctggaggagagattgatct 48599385  T
Q  369 ctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcca 468  Q
    ||| ||||||||| ||||||| ||||  |||||||||||||| |||||||||||||||||||||||||||||| | |||||||| |||||||| || |||    
T  48599386 ctccaatccactatcaatgagctcttc-caaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctaccca 48599484  T
Q  469 tttt 472  Q
    ||||    
T  48599485 tttt 48599488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 1113781 - 1113632
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| |||| |||| |||||||||||| ||||||||||||||| | |||| ||||||||||||||||||||||| | |||||||| |||||||    
T  1113781 attgatctctccaatctactatcaatgagttctt-acaaagagatacaaatgggttataagaaattagcttcaacaagctcacaaagaacaaccctaatt 1113683  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | |||||||||| ||||||||     ||||||||||||||||||||||||||    
T  1113682 tctatccattttctcaatctc-acaaatgaacaagacactcaatgattttca 1113632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 361 - 472
Target Start/End: Original strand, 2361016 - 2361126
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | |||||||| |||||||    
T  2361016 attgatatctcaaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatt 2361114  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  2361115 tctacccatttt 2361126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 30024776 - 30024925
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||| |||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | | |||||| |||||||    
T  30024776 attgatctctccaatccactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaacaaccctaatt 30024874  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||| ||||||||   | ||||||||||||||||||||||||||    
T  30024875 tctacccattttctcaatctc-accaatgaacaagacactcaatgattttca 30024925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 48491703 - 48491554
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||||||||||||| |||||||||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||    
T  48491703 attgatctctccaatccactatcaatgagttcttt-caaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 48491605  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  48491604 tctacccattttcccaatctc-accaatgaacaagacactcaatgattttca 48491554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 270 - 461
Target Start/End: Original strand, 4508655 - 4508849
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttg 364  Q
    ||||| ||||||||||||||||||||| |||||||||||||   |||||||||||| | |||||||||||||||  | | |||||||       |  |||    
T  4508655 caaaggataaacaagataaagagagtaaagaaaatataacaacaccaagaaatgttcacccagttcggtccaact-taacctactctgaagaagagattg 4508753  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    || |||| ||||||||  |||||||||||| ||||||||||||||| | ||||||||||||||||||||| |||||| | |||||||| ||||||||    
T  4508754 atctctccaatccactctcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaataagctcacaaagaacaaccctaattt 4508849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 23555164 - 23555014
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| |||||||| |||||||| ||||||||||||||||||||||||| || | |||||||| |||||||    
T  23555164 attgatctctccaatccactatcaatgagttctt-acaaagaggtacaaaagtgttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 23555066  T
Q  461 tttatccattttt---caatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||||   |||||||   | ||||||||||||||||||||||||||    
T  23555065 tcta-ccattttttcccaatctc-accaatgaacaagacactcaatgattttca 23555014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 26417440 - 26417291
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||| |||||||| ||||||||||||||| | |||||||||||||| ||||||||||||| | |||||||| |||||||    
T  26417440 attgatctctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattatcttcaacaagctcacaaagaacaaccctaatt 26417342  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  26417341 tctacccattttcccaatctc-accaatgaacaagacactcaatgattttca 26417291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 373 - 511
Target Start/End: Complemental strand, 27347929 - 27347792
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 472  Q
    ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||| || |||||||    
T  27347929 aatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaatcctaatttctacccatttt 27347831  T
Q  473 -tcaatctctttccatgaacaagacactcaatgattttca 511  Q
      |||||||   | ||||||||||||||||||||||||||    
T  27347830 cccaatctc-accaatgaacaagacactcaatgattttca 27347792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 31733013 - 31733162
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| |||||| || |||||||||||| ||||||||||||||| | |||||||||||||||||||| ||||||| | |||||||| |||||||    
T  31733013 attgatctctccaatccagtatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaccaagctcacaaagaacaaccctaatt 31733111  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||| ||| ||||   | ||||||||||||||||||||||||||    
T  31733112 tctacccattttctcagtctc-accaatgaacaagacactcaatgattttca 31733162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 274 - 441
Target Start/End: Original strand, 32358007 - 32358177
Alignment:
Q  274 gaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgattt 368  Q
    ||||||||||| ||||||||||| |||||| ||||||   |||||||||||| | |||||||||||||||  ||| |||||||       |  ||||| |    
T  32358007 gaataaacaagttaaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-tgacctactctggaggagagattgatct 32358105  T
Q  369 ctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctc 441  Q
    ||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||    
T  32358106 ctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctc 32358177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 361 - 461
Target Start/End: Original strand, 23565105 - 23565205
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaa-acctaat 459  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| | |||||||| |||||||    
T  23565105 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagtttcaacaagctcacaaagaacaagacctaat 23565203  T
Q  460 tt 461  Q
    ||    
T  23565204 tt 23565205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 368 - 508
Target Start/End: Complemental strand, 5116722 - 5116582
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||| ||||| ||||||||||||||||||||||||||||||  |||||| |||||| ||||||||| || |||||||||||||||||||| ||  |    
T  5116722 tctccaattcactatcaatgagttctttacaaagagatacaaaaggtttacaataaattatcttcaacaaactatccaagaacaaacctaatttctactc 5116623  T
Q  468 atttttcaatctctttccatgaacaagacactcaatgattt 508  Q
     |||   |||||| | |||| ||||||| ||||||||||||    
T  5116622 ttttcctaatctcctcccataaacaagagactcaatgattt 5116582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 6432095 - 6431985
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||| |||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||    
T  6432095 attgatctctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaatcctaatt 6431997  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  6431996 tctacccatttt 6431985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 18126768 - 18126619
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    ||||||| ||| ||||||||| |||||||||||| ||||||||||||||| | |||||||||||||||||| |||||| || | |||||||| |||||||    
T  18126768 attgattcctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttgaacaagttcacaaagaacaaccctaatt 18126670  T
Q  461 tttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 511  Q
    | ||  |||||||| ||||||   | |||||||| |||||||||||||||||    
T  18126669 tctacacatttttccaatctcac-caatgaacaaaacactcaatgattttca 18126619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 22270097 - 22269987
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||| ||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||    
T  22270097 attgatctctccaatccactatcaatcagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatt 22269999  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  22269998 tctacccatttt 22269987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 377 - 461
Target Start/End: Original strand, 43363531 - 43363617
Alignment:
Q  377 cactaccaatgagttctttacaaa--gagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||| ||||||||| ||||||||  |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  43363531 cactatcaatgagttatttacaaatagagatacaaaagagttacaataaattagtttcaacaagctctccaagaacaaacctaattt 43363617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 43864368 - 43864219
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||| |||| |||||||||||||||||| | |||||| |||||||||||||||||| || | |||||||| |||||||    
T  43864368 attgatctctccaatccactatcaattagtt-tttacaaagagatacaaatgggttacaggaaattagcttcaacaagttcacaaagaacaaccctaatt 43864270  T
Q  461 tttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||| ||||| ||||||   | ||||||||||||||||||||||||||    
T  43864269 tctacccacttttccaatctcac-caatgaacaagacactcaatgattttca 43864219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 361 - 455
Target Start/End: Original strand, 4253572 - 4253666
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc 455  Q
    |||||| ||||||||||| || ||||||||||||| |||||||||| ||||| |||||| ||||||||||||||||||||| | |||||||||||    
T  4253572 attgatctctctaatccattatcaatgagttctttccaaagagatataaaagggttacatgaaattagcttcaacaagctcacaaagaacaaacc 4253666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 274 - 472
Target Start/End: Complemental strand, 3259210 - 3259009
Alignment:
Q  274 gaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgattt 368  Q
    ||||||||||||||||||||||| |||||| ||||||   ||| |||||||| | |||||||||| ||||  ||| |||||||       |  ||||| |    
T  3259210 gaataaacaagataaagagagtaaagaaaagataacaacaccaggaaatgttcacccagttcggttcaact-tgacctactctggaggagagattgatct 3259112  T
Q  369 ctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcca 468  Q
    ||| ||||||||| ||||| ||| |||||||||||||||||| ||||||||| |||||||||| ||||||||| | |||||||| |||| ||| || |||    
T  3259111 ctccaatccactatcaatgggtt-tttacaaagagatacaaatgagttacaataaattagcttaaacaagctcacaaagaacaaccctagtttctaccca 3259013  T
Q  469 tttt 472  Q
    ||||    
T  3259012 tttt 3259009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 361 - 508
Target Start/End: Complemental strand, 4586285 - 4586139
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||| ||| | ||||||| ||||||||||||||||| || | |||||||| |||||||    
T  4586285 attgatctctccaatccactatcaatgagttctt-acaaagagataaaaatgggttacaaaaaattagcttcaacaagttcacaaagaacaaccctaatt 4586187  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattt 508  Q
    | || |||||||  |||||||   | |||||||||||||||||||||||    
T  4586186 tctacccattttcccaatctc-accaatgaacaagacactcaatgattt 4586139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 35854031 - 35853889
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || ||    
T  35854031 tctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccc 35853933  T
Q  468 atttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
     ||||  |||||||   | ||||||||||||||||||||||||||    
T  35853932 tttttcccaatctc-accaatgaacaagacactcaatgattttca 35853889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 36146452 - 36146601
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaac-ctaat 459  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||||| | || ||||||| |||||    
T  36146452 attgatctctcaaatccactatcaatgagttctt-acaaagagatacaaatgggttaca-gaaattagcttcaacaagctcacaaataacaaactctaat 36146549  T
Q  460 ttttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    || || |||||||  |||||||   | ||||||||||||||||||||||||||    
T  36146550 ttctacccattttcccaatctc-accaatgaacaagacactcaatgattttca 36146601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 361 - 453
Target Start/End: Original strand, 36574559 - 36574651
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa 453  Q
    |||||| |||| || |||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| | |||||||||    
T  36574559 attgatctctccaaaccactatcaatgagttctttacaaagagatataaaagggttacaagaaattagcttcaacaaactcacaaagaacaaa 36574651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 388 - 508
Target Start/End: Original strand, 1360221 - 1360343
Alignment:
Q  388 agttctttacaaagagatacaaaagag--ttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttcc 485  Q
    ||||| |||||||||||||||||| ||  |||||||||||| ||||||||||| |||||||||  ||||||||||| || |  |||  ||||||| ||||    
T  1360221 agttccttacaaagagatacaaaaaagggttacaagaaattcgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattcc 1360320  T
Q  486 atgaacaagacactcaatgattt 508  Q
    |||||||||| ||||||||||||    
T  1360321 atgaacaagagactcaatgattt 1360343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 460
Target Start/End: Original strand, 2759241 - 2759339
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||| || | |||||||| |||||||    
T  2759241 attgatatctccaatccactatcaatgagttctt-acaaagagatataaatgagttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 2759339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 8153466 - 8153317
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||||||||| || ||||||||||||||| ||||||||||||||||||||  |||| ||| | |||||||| |||||||    
T  8153466 attgatctctccaatccactatcaatgagttatt-acaaagagatacaaatgagttacaagaaattagctttgacaatctcacaaagaacaaccctaatt 8153368  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | ||  ||||||  |||||||   | ||||||||||||||||||||||||||    
T  8153367 tctactcattttcccaatctc-accaatgaacaagacactcaatgattttca 8153317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 14069877 - 14070026
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||  ||||| || | |||||||| |||||||    
T  14069877 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccctaatt 14069975  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || || ||||  |||||||   | ||||||||||||||||||||||||||    
T  14069976 tctaccctttttcccaatctc-accaatgaacaagacactcaatgattttca 14070026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 14379905 - 14380054
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||  ||||| || | |||||||| |||||||    
T  14379905 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccctaatt 14380003  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || || ||||  |||||||   | ||||||||||||||||||||||||||    
T  14380004 tctaccctttttcccaatctc-accaatgaacaagacactcaatgattttca 14380054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 507
Target Start/End: Complemental strand, 19502302 - 19502156
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||| | || ||||| | |||||    
T  19502302 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagctttgacaagctcacaaaaaacaaccttaatt 19502204  T
Q  461 tttatccatttttcaatctctttcca-tgaacaagacactcaatgatt 507  Q
    | || || ||||||    |||  ||| |||||||||||||||||||||    
T  19502203 tctaaccttttttcgcaatctcaccactgaacaagacactcaatgatt 19502156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 41649055 - 41649203
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| |||||| |||||||| | |||||||||||||||| | ||||||||| | ||||||||||||||||    
T  41649055 attgatctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagc-taaacaagctcacaaagaacaaacctaatt 41649152  T
Q  461 tttatccattttt-caatctctttccatgaacaagacactcaatgattttca 511  Q
    | || | |||||| |||||||     ||||||||||||||||||||||||||    
T  41649153 tctaccaatttttccaatctc-acaaatgaacaagacactcaatgattttca 41649203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 47676180 - 47676329
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| | ||||||| || ||||||||| ||||||||||||||| | ||||||||||||||||||||||||  || | |||||||| |||||||    
T  47676180 attgatctctccattccactatcattgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaacaaccctaatt 47676278  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || ||||||| ||||||||   | |||||||||||||||| |||||||||    
T  47676279 tctacccattttctcaatctc-accaatgaacaagacactcattgattttca 47676329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 326 - 508
Target Start/End: Original strand, 3904624 - 3904808
Alignment:
Q  326 ccagttcggtccaacaatgatctactctnnnnnnna--ttgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaa 423  Q
    |||||||||||||||||||| |||||||       |  ||||| ||||| ||| |||| ||||||||||||||||||||||| |||||| ||||||||||    
T  3904624 ccagttcggtccaacaatgacctactctgagggagagattgatctctctgatc-actatcaatgagttctttacaaagagatgcaaaagtgttacaagaa 3904722  T
Q  424 attagcttcaacaagctctccaagaac-aaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaatgattt 508  Q
    ||||  ||||| | |||||| |||||| ||||||||||| || |||||||  ||||||||| | | |||||||| ||||||||||||    
T  3904723 attacattcaataggctctcaaagaacaaaacctaatttcta-ccattttcccaatctcttcctaagaacaagagactcaatgattt 3904808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 29991177 - 29991029
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| ||||||||| || | ||||||||||||||| ||||||||||||||||||  ||||| || | || ||||| |||||||    
T  29991177 attgatctctccaatccactatcaatgagttatt-agaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaataacaaccctaatt 29991079  T
Q  461 tttatccatttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | ||||| |||  |||||||   | ||||||||||||||||||||||||||    
T  29991078 tctatccttttcccaatctc-accaatgaacaagacactcaatgattttca 29991029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 361 - 474
Target Start/End: Complemental strand, 2390406 - 2390294
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| |||||||||   ||||||| || ||||||||||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||    
T  2390406 attgatctctccaatccactatatatgagttatt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatt 2390308  T
Q  461 tttatccatttttc 474  Q
    | || |||||||||    
T  2390307 tctacccatttttc 2390294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 383 - 511
Target Start/End: Complemental strand, 31518897 - 31518770
Alignment:
Q  383 caatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctct 481  Q
    |||||||||||| ||||||||||||||| ||||||||||||| ||||||||| |||||| | ||||||||||||||||| || | |||||  |||||||     
T  31518897 caatgagttctt-acaaagagatacaaatgagttacaagaaactagcttcaataagctcacaaagaacaaacctaatttctacctattttcccaatctc- 31518800  T
Q  482 ttccatgaacaagacactcaatgattttca 511  Q
      | ||||||||||||||| ||||||||||    
T  31518799 accaatgaacaagacactcgatgattttca 31518770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 274 - 472
Target Start/End: Original strand, 34310668 - 34310870
Alignment:
Q  274 gaataaacaagataaagagagtatagaaaatataacaccaagaaa---tgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgattt 368  Q
    ||||||||||||||||||||||| |||||| |||||| ||  |||   |||| | ||||||||||||||   ||| |||||||       |  ||||| |    
T  34310668 gaataaacaagataaagagagtaaagaaaagataacaacaccaaagattgttcacccagttcggtccaaacttgacctactctggaggagagattgatct 34310767  T
Q  369 ctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcca 468  Q
    ||| ||||||||| |||||||||||| ||||| ||||||||| | ||||||||||||||||||||||||  || | |||||||| |||||||| || |||    
T  34310768 ctccaatccactatcaatgagttctt-acaaaaagatacaaatgtgttacaagaaattagcttcaacaatttcacaaagaacaaccctaatttctaccca 34310866  T
Q  469 tttt 472  Q
    ||||    
T  34310867 tttt 34310870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 537 - 617
Target Start/End: Original strand, 23794074 - 23794154
Alignment:
Q  537 gaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactc 617  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||||||| || || || ||||||||||||||||||||||    
T  23794074 gaaccaaccattagcctttgattttctaaggatctcctcttttggtctcttacgattcacccaaattgctcacaaagactc 23794154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 31105444 - 31105586
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||| | |||||||||||| ||||| ||||||||| | |||||||||||||||||||||||||||| | ||||| ||| ||||||| || ||    
T  31105444 tctccaatccaccatcaatgagttctt-acaaaaagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaaaaaatctaatttctaccc 31105542  T
Q  468 atttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    |||||  |||||||     ||||||||||||||||||||||||||    
T  31105543 attttcccaatctc-acaaatgaacaagacactcaatgattttca 31105586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 472
Target Start/End: Original strand, 496027 - 496137
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| | ||||||||||||| | ||| |||||||||||||||||||||||| | |||||| | |||||||    
T  496027 attgatctctccaatccactatcaatgagttctt-ataaagagatacaaatgggttgcaagaaattagcttcaacaagctcacaaagaactaccctaatt 496125  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  496126 tctacccatttt 496137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 276 - 472
Target Start/End: Original strand, 4510503 - 4510702
Alignment:
Q  276 ataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgatttct 370  Q
    ||||||||||| ||||||||| |||||| ||||||   |||||||||||| | ||||| |||||||||  ||| |||||||       |  |||||||||    
T  4510503 ataaacaagatcaagagagtaaagaaaagataacaacaccaagaaatgttcacccagtacggtccaact-tgacctactctacaggagagattgatttct 4510601  T
Q  371 ctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatt 470  Q
      ||||||||| |||||||||||| | ||||||||||||| | ||||||||||||||||||||| || ||| | |||||||| | |||||| || |||||    
T  4510602 tcaatccactatcaatgagttctt-ataaagagatacaaatgggttacaagaaattagcttcaataaactcacaaagaacaaccttaatttctacccatt 4510700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 276 - 472
Target Start/End: Original strand, 4512345 - 4512544
Alignment:
Q  276 ataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgatttct 370  Q
    ||||||||||| ||||||||| |||||| ||||||   |||||||||||| | ||||| |||||||||  ||| |||||||       |  |||||||||    
T  4512345 ataaacaagatcaagagagtaaagaaaagataacaacaccaagaaatgttcacccagtacggtccaact-tgacctactctacaggagagattgatttct 4512443  T
Q  371 ctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatt 470  Q
      ||||||||| |||||||||||| | ||||||||||||| | ||||||||||||||||||||| || ||| | |||||||| | |||||| || |||||    
T  4512444 tcaatccactatcaatgagttctt-ataaagagatacaaatgggttacaagaaattagcttcaataaactcacaaagaacaaccttaatttctacccatt 4512542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 25615977 - 25615867
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||||||||||||| |||||||||||| |||||  |||||||| | |||||||||||||||||| ||||||| | |  |||||||||||||||    
T  25615977 attgatctctctaatccactatcaatgagttctt-acaaaatgatacaaatgggttacaagaaattagcttaaacaagcgcacatagaacaaacctaatt 25615879  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  25615878 tctacccatttt 25615867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 373 - 510
Target Start/End: Original strand, 38671278 - 38671414
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 472  Q
    ||||||||| |||||||||| |||||||| |||||||| | ||||||| |||||||||| ||||||||| | |||||||| |||||||| || |||||||    
T  38671278 aatccactatcaatgagttc-ttacaaagtgatacaaatgtgttacaataaattagcttaaacaagctcacaaagaacaaccctaatttctacccatttt 38671376  T
Q  473 -tcaatctctttccatgaacaagacactcaatgattttc 510  Q
      |||||||     |||||||||||||||||||||||||    
T  38671377 cccaatctc-acaaatgaacaagacactcaatgattttc 38671414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 2390223 - 2390126
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  2390223 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 2390126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 361 - 446
Target Start/End: Original strand, 6359996 - 6360080
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaa 446  Q
    |||||| |||| |||| |||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| ||||    
T  6359996 attgatctctccaatcaactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcaccaa 6360080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 516 - 612
Target Start/End: Original strand, 34310943 - 34311040
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  34310943 tagaatctaacccccaaaagagaaccaacctttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 34311040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 368 - 511
Target Start/End: Original strand, 25767011 - 25767151
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagag-ttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatc 466  Q
    |||| ||||||||| |||||||||||| | ||||||||||||||| | |||||||||||||||||  ||||| || | |||||||| |||||||| || |    
T  25767011 tctccaatccactatcaatgagttcttca-aaagagatacaaaaggggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacc 25767109  T
Q  467 cattttt-caatctctttccatgaacaagacactcaatgattttca 511  Q
    | ||||| |||||    || ||||||||||||||||||||||||||    
T  25767110 cttttttccaatc----tcaatgaacaagacactcaatgattttca 25767151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 41317478 - 41317627
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| |||||| |||||||| |  |||||||||||||||||  |||||||| | |||||||| |||||||    
T  41317478 attgatctctccaatccactatcaatgagttctt-acaaagggatacaaatggattacaagaaattagctttgacaagctcacaaagaacaaccctaatt 41317576  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || | |||||  |||||||   | |||||||||| |||||||||||||||    
T  41317577 tctaccaattttcccaatctc-accaatgaacaagagactcaatgattttca 41317627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 361 - 472
Target Start/End: Complemental strand, 48489555 - 48489445
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| |||||||||  |||||||| ||  |||||||||||||| | ||||||||||||||||||||||||| | || |||||||| |||||||    
T  48489555 attgatctctccaatccactatgaatgagttattg-caaagagatacaaatgggttacaagaaattagcttcaacaagttttcaaagaacaaccctaatt 48489457  T
Q  461 tttatccatttt 472  Q
    | || |||||||    
T  48489456 tctacccatttt 48489445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 2361199 - 2361324
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 613  Q
    |||||||||| || |||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| || |||||||| ||||| |||||||| ||||    
T  2361199 tagaatctaa-cctcaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcataagactcacccaagttgctcacaaaag 2361297  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  2361298 actctccactcatgtgtttcccaaccc 2361324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 511
Target Start/End: Complemental strand, 4178885 - 4178749
Alignment:
Q  373 aatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 472  Q
    ||||||||| ||||||||||||  |||||||||||||||| ||||||||||||||||||   |||| || | |||||||| |||||||| || || ||||    
T  4178885 aatccactatcaatgagttctt--caaagagatacaaaagggttacaagaaattagctttcccaagttcacaaagaacaaccctaatttcta-ccttttt 4178789  T
Q  473 t--caatctctttccatgaacaagacactcaatgattttca 511  Q
    |  |||||||   | ||||||||||||||||||||||||||    
T  4178788 tcccaatctc-accaatgaacaagacactcaatgattttca 4178749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 4512617 - 4512743
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 613  Q
    |||||| ||| |||||||||||||| |||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| ||||||||||| |    
T  4512617 tagaatataacccccaaaagagaactaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatg 4512716  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | ||||||||||||||||    
T  4512717 actctccactcatgtgtttccaaaccc 4512743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 516 - 612
Target Start/End: Original strand, 6360139 - 6360236
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||| | ||  ||||||| ||||| |||||||||||    
T  6360139 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaa 6360236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 308 - 461
Target Start/End: Complemental strand, 31519081 - 31518928
Alignment:
Q  308 acaccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnn---attgatttctctaatccactaccaatgagttctttacaaagaga 404  Q
    ||||||||||||||| |||||||||||||||||  ||| |||||||          |||||| |||| ||||||||  |||||||||||| |||||||||    
T  31519081 acaccaagaaatgtttatccagttcggtccaact-tgacctactctggggagagagattgatctctccaatccactgtcaatgagttctt-acaaagaga 31518984  T
Q  405 tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||||| |||||||||| || ||||||||| |||||| |  ||||||||||||||||    
T  31518983 tacaaatgagttacaag-aactagcttcaataagctcacagagaacaaacctaattt 31518928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 516 - 612
Target Start/End: Original strand, 48599561 - 48599658
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||| ||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  48599561 tagaatataacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 48599658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 361 - 509
Target Start/End: Complemental strand, 26639449 - 26639297
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaa----agagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacct 456  Q
    |||||| ||||||||||| || ||| ||||| |||||||    | | ||||||||| |||||||||||||| | ||||||| ||||||||||||| ||||    
T  26639449 attgatctctctaatccattatcaaagagttatttacaatgatatatatacaaaagggttacaagaaattaacatcaacaaactctccaagaacatacct 26639350  T
Q  457 aatttttatccatttt-tcaatctctttccatgaacaagacactcaatgatttt 509  Q
    ||||| || |||||||  ||||||||| |||  || |||| |||||||||||||    
T  26639349 aatttcta-ccattttcacaatctcttcccaaaaagaagagactcaatgatttt 26639297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 480
Target Start/End: Complemental strand, 39731486 - 39731374
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| ||||||||||||   ||||||||||||||||||||||||||||||| |   ||||| || | |||||||| |||||||| || ||    
T  39731486 tctccaatccactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatctgacaagttcacaaagaacaaccctaatttctaccc 39731387  T
Q  468 atttttcaatctc 480  Q
     |||| |||||||    
T  39731386 tttttccaatctc 39731374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 387 - 434
Target Start/End: Complemental strand, 27073915 - 27073868
Alignment:
Q  387 gagttctttacaaagagatacaaaagagttacaagaaattagcttcaa 434  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27073915 gagttctttacaaagagatacaaaagagttacaagaaattaacttcaa 27073868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 387 - 434
Target Start/End: Original strand, 27204398 - 27204445
Alignment:
Q  387 gagttctttacaaagagatacaaaagagttacaagaaattagcttcaa 434  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27204398 gagttctttacaaagagatacaaaagagttacaagaaattaacttcaa 27204445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 29608677 - 29608551
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 613  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  ||||| || |||| ||||||| ||  ||||||| ||||| |||||||| ||||    
T  29608677 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagaatcttctattttggtttcacaagactcacccaagttgctcacaaaag 29608578  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  29608577 actctccactcatgtgtttcccaaccc 29608551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 6431912 - 6431815
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| || |||||||||||||||| ||| | ||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  6431912 tagaatctaaccctcaaaagagaaccaacccttagcatttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 6431815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 361 - 461
Target Start/End: Complemental strand, 18396442 - 18396342
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaat 459  Q
    |||||| |||| ||||| ||| |||||| ||||||| ||||||||||||||  ||||||| ||| ||| |||||||| |||||||||||| |||||||||    
T  18396442 attgatctctccaatcctctatcaatgaattctttataaagagatacaaaa-tgttacaaaaaaataggttcaacaaactctccaagaacaaaacctaat 18396344  T
Q  460 tt 461  Q
    ||    
T  18396343 tt 18396342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 511
Target Start/End: Original strand, 12097941 - 12098052
Alignment:
Q  400 agagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacac 498  Q
    ||||||||||| | |||||||||||||| ||||||||||||| | | |||||| |||||||| || |||||||  ||||||    | |||||||||||||    
T  12097941 agagatacaaatgggttacaagaaattaacttcaacaagctcacaatgaacaaccctaatttctacccattttcccaatct-aaccaatgaacaagacac 12098039  T
Q  499 tcaatgattttca 511  Q
    |||||||||||||    
T  12098040 tcaatgattttca 12098052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 506 - 632
Target Start/End: Original strand, 1360371 - 1360497
Alignment:
Q  506 ttttcaattttagaatctaatcccc-aaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattg 604  Q
    ||||||| | |||||||||| |||| ||||||||||||| |  ||||||||||||| | ||  ||||||||||||||| | | ||||||| | ||| |||    
T  1360371 ttttcaactctagaatctaaccccccaaaagagaaccaatccatatcctttgatttcccaaaaatattctcttttggttttccaagactcactcaagttg 1360470  T
Q  605 ctcacaaagactctcatttgatgtgttt 632  Q
    ||| |||| |||||| ||||||||||||    
T  1360471 ctcgcaaa-actctcctttgatgtgttt 1360497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 365 - 456
Target Start/End: Complemental strand, 23344095 - 23344005
Alignment:
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacct 456  Q
    ||||||| |||| | || |||||||||||  ||||||| |||| |||| |||||||||||||||||||||||||||| | ||||| ||||||    
T  23344095 atttctccaatctattatcaatgagttctc-acaaagatatactaaagggttacaagaaattagcttcaacaagctcacaaagaataaacct 23344005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 527 - 644
Target Start/End: Original strand, 22328637 - 22328755
Alignment:
Q  527 ccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-gactctcatttga 625  Q
    ||||||||||||||||||| ||| | |||||||   ||||||||||||||||| || ||| |||| || ||||| ||||||||||| |||||||   | |    
T  22328637 ccccaaaagagaaccaacccttagcttttgattacataaggatattctcttttagtttcccaagattcacccaagttgctcacaaatgactctctactca 22328736  T
Q  626 tgtgtttccaaaccctatg 644  Q
    ||| ||||| |||||||||    
T  22328737 tgtttttcccaaccctatg 22328755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 633
Target Start/End: Original strand, 43363683 - 43363759
Alignment:
Q  557 attttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtgtttc 633  Q
    |||| |||| ||| |||||||||||||||  |||| || |||||||||||||||| ||||||||| | |||||||||    
T  43363683 atttcctaaagatcttctcttttggtctctcaagattcacccaaattgctcacaaggactctcatctcatgtgtttc 43363759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 508
Target Start/End: Complemental strand, 40808697 - 40808567
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 476  Q
    ||||| ||| || ||||||||||||||||||||||  || || |||| |||||||||||||| ||| |||||| ||  ||||||| ||   ||||| | |    
T  40808697 cactatcaacgaattctttacaaagagatacaaaatggtaacgagaa-ttagcttcaacaagttcttcaagaaaaagtctaatttatactgattttccga 40808599  T
Q  477 tctctttccatgaacaagacactcaatgattt 508  Q
    |||||| ||||||||||||  | |||||||||    
T  40808598 tctcttcccatgaacaagaggcgcaatgattt 40808567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 516 - 606
Target Start/End: Complemental strand, 3258935 - 3258846
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgct 606  Q
    |||||||||| ||||||| ||||||||||| |||   |||||||| |||||||| |||||||||||| ||  ||||||| ||||| |||||    
T  3258935 tagaatctaacccccaaatgagaaccaacccttagg-tttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgct 3258846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 4510775 - 4510901
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 613  Q
    |||||||||| ||  ||||||||||||| | ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| || || ||||||||||| |    
T  4510775 tagaatctaacccataaaagagaaccaatcgttagcctttgatttcactaaggatcttctcttttggtttcacaagactcaccaaagttgctcacaaatg 4510874  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  4510875 actctccactcatgtgtttcccaaccc 4510901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 511
Target Start/End: Original strand, 24525985 - 24526090
Alignment:
Q  407 caaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaatg 504  Q
    |||| ||||||||||||||||||||  |||||||| | |||||| ||||||||||| || |||||||  |||| ||   | |||||||||||||||||||    
T  24525985 caaatgagttacaagaaattagctttgacaagctcacaaagaacaaaacctaatttctacccattttcccaatttc-accaatgaacaagacactcaatg 24526083  T
Q  505 attttca 511  Q
    |||||||    
T  24526084 attttca 24526090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 48408921 - 48408777
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatc 466  Q
    |||| ||||||||| ||||||||| |||  |||||||||||||| | ||||||||||||||||||  ||||| |  | ||||||||   |||||| || |    
T  48408921 tctccaatccactatcaatgagttatttcaaaagagatacaaaaggggttacaagaaattagctttgacaagtttacaaagaacaacattaatttctacc 48408822  T
Q  467 catttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | ||||  |||||||   | ||||||||||||||||||||||||||    
T  48408821 ctttttcccaatctc-accaatgaacaagacactcaatgattttca 48408777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 511
Target Start/End: Original strand, 4538627 - 4538733
Alignment:
Q  405 tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-aatctctttccatgaacaagacactcaat 503  Q
    |||||| | |||||||||||||||||| || ||  ||   |||||||| |||||||| || ||||||||| ||||||   | ||||||||||||||||||    
T  4538627 tacaaatgggttacaagaaattagcttaaaaaatttcataaagaacaaccctaatttctacccatttttccaatctcac-caatgaacaagacactcaat 4538725  T
Q  504 gattttca 511  Q
    ||||||||    
T  4538726 gattttca 4538733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 1360075 - 1360154
Alignment:
Q  222 tagatataatctaaaaatcaagtttaaagtaaaaccacaatagaatatcaaagaataaacaagataaagagagtatagaaaa 303  Q
    ||||| |||||||||||  |||| ||||| ||||||||||| ||| |  |||||| |||||||||||||||| || ||||||    
T  1360075 tagatctaatctaaaaactaagtgtaaagcaaaaccacaatcgaaca--aaagaagaaacaagataaagagaatagagaaaa 1360154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 451
Target Start/End: Complemental strand, 2995388 - 2995330
Alignment:
Q  394 ttacaaagagatacaaaagag-ttacaagaaattagcttcaacaagctctccaagaaca 451  Q
    |||||||||||||||||| |  |||||||| ||||| ||||||||| ||||||||||||    
T  2995388 ttacaaagagatacaaaaaaaattacaagatattagtttcaacaagttctccaagaaca 2995330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 4508933 - 4509059
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 613  Q
    |||||||||| ||  ||||||||||||| | ||| ||||||||||  |||||||| || ||||||||| ||  ||||||| || || ||||||||||| |    
T  4508933 tagaatctaacccataaaagagaaccaatccttagcctttgatttcactaaggatcttatcttttggtttcacaagactcaccaaagttgctcacaaatg 4509032  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  4509033 actctccactcatgtgtttcccaaccc 4509059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 422 - 511
Target Start/End: Original strand, 5514113 - 5514202
Alignment:
Q  422 aaattagcttcaacaagctctccaagaacaaacc-taatttttatccatttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
    |||||||||||||||||||| | ||||||||| | |||||| ||  | |||||||||||||    |||||||||| |||||||||||||||    
T  5514113 aaattagcttcaacaagctcacaaagaacaaaacataatttctactcttttttcaatctctcaa-atgaacaagaaactcaatgattttca 5514202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 43504205 - 43504299
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||| ||| ||||| ||||||||||||   |||||||||||||| ||||||||||||||||| ||  ||||| || | | |||||| ||||||||    
T  43504205 tctccaattcactatcaatgagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttcacaatgaacaaccctaattt 43504299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 428
Target Start/End: Original strand, 20128279 - 20128323
Alignment:
Q  383 caatgagttctttacaaagagatacaaaagagttacaagaaattag 428  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||||    
T  20128279 caatgagttcattacaaaaagatacaaaaga-ttacaagaaattag 20128323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 600
Target Start/End: Complemental strand, 22269914 - 22269829
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaa 600  Q
    |||||||||| |||||||||||||||||||  || ||| ||||||  |||||||| |||| ||||||| ||  ||||||| |||||    
T  22269914 tagaatctaacccccaaaagagaaccaacccatagcctatgatttcactaaggatcttctattttggtttcacaagactcacccaa 22269829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 591
Target Start/End: Original strand, 22552683 - 22552736
Alignment:
Q  538 aaccaaccattatcctttgattttctaaggatattctcttttggtctcctaaga 591  Q
    |||||||| |||||||||||||| ||| | || |||||||||||||||| ||||    
T  22552683 aaccaacccttatcctttgatttcctatgaatcttctcttttggtctcccaaga 22552736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 410
Target Start/End: Original strand, 24525546 - 24525594
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaa 410  Q
    |||||| |||| ||||||||| |||||||||| |||||||||||||||||    
T  24525546 attgatctctccaatccactatcaatgagttc-ttacaaagagatacaaa 24525594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 390 - 438
Target Start/End: Original strand, 23793904 - 23793952
Alignment:
Q  390 ttctttacaaagagatacaaaagagttacaagaaattagcttcaacaag 438  Q
    ||||||| |||||||||||||| |||||| | || ||||||||||||||    
T  23793904 ttctttataaagagatacaaaatagttactaaaagttagcttcaacaag 23793952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 26639681 - 26639641
Alignment:
Q  150 ggtaacttcaaatctcacatcaataaaattgagatttgtga 190  Q
    ||||||| |||||||||||||||||||||| |||| |||||    
T  26639681 ggtaactccaaatctcacatcaataaaatttagatatgtga 26639641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 270 - 511
Target Start/End: Complemental strand, 7546 - 7303
Alignment:
Q  270 caaagaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttg 364  Q
    ||||| ||||||||||||||||||||| |||||| ||||||   |||||||||||| | |||||||||||||||  | | |||||||       |  |||    
T  7546 caaaggataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcggtccaact-taacctactctagaggagagattg 7448  T
Q  365 atttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttta 464  Q
    || | || ||||||||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| | |||||||| | |||||| ||    
T  7447 atctttccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccttaatttcta 7349  T
Q  465 tccattttt-caatctctttccatgaacaagacactcaatgattttca 511  Q
     |||||||| |||||||   | ||||||||||||||| ||||||||||    
T  7348 cccatttttccaatctc-accaatgaacaagacactc-atgattttca 7303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 516 - 612
Target Start/End: Complemental strand, 7269 - 7172
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 612  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  7269 tagaatctaacccccaaaagagaaccaacccttagcctttgattttactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 7172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 69; Significance: 1e-30; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 377 - 461
Target Start/End: Original strand, 490380 - 490464
Alignment:
Q  377 cactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  490380 cactatcaatgagtactttacaaagatatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacttaattt 490464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 434650 - 434507
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || ||    
T  434650 tctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccc 434552  T
Q  468 atttt--tcaatctctttccatgaacaagacactcaatgattttca 511  Q
     ||||   |||||||   | ||||||||||||||||||||||||||    
T  434551 tttttccccaatctc-accaatgaacaagacactcaatgattttca 434507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 553 - 634
Target Start/End: Original strand, 490710 - 490791
Alignment:
Q  553 tttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtgtttcc 634  Q
    |||||||| |||| ||||| ||||||||||||| |||||||||||||| ||||||| ||| |||||| ||||||||||||||    
T  490710 tttgatttcctaatgatatactcttttggtctcgtaagactcgcccaagttgctcataaaaactctcctttgatgtgtttcc 490791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 361 - 508
Target Start/End: Original strand, 27486 - 27634
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaa-acctaat 459  Q
    |||||| |||| ||||||||| |||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| || ||||    
T  27486 attgatctctccaatccactatcaataagttatttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcttcaagaacaatacataat 27585  T
Q  460 ttttatccatttttcaatctctttccatgaacaagacactcaatgattt 508  Q
    || ||  | |||  ||||||||| ||  |||||||| |||||| |||||    
T  27586 ttctactcttttcacaatctcttccctagaacaagagactcaaagattt 27634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 274 - 461
Target Start/End: Original strand, 17956 - 18146
Alignment:
Q  274 gaataaacaagataaagagagtatagaaaatataaca---ccaagaaatgttaatccagttcggtccaacaatgatctactctnnnnnnna--ttgattt 368  Q
    ||||||||||||||||||||||| |||||| ||||||   |||||||||||| | |||||||| |||||   ||| |||| ||       |  ||||| |    
T  17956 gaataaacaagataaagagagtaaagaaaagataacaacaccaagaaatgttcacccagttcgatccaaacttgacctaccctggaggagagattgatct 18055  T
Q  369 ctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    ||| ||||||||| |||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||| | | |||||| ||||||||    
T  18056 ctccaatccactatcaatgagtt--ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaatgaacaaccctaattt 18146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 11674 - 11532
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||  ||||| || | |||||||| |||||||| || ||    
T  11674 tctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagctttgacaagttcacaaagaacaaccctaatttcta-cc 11577  T
Q  468 attttt--caatctctttccatgaacaagacactcaatgattttca 511  Q
    ||||||  |||||||   | ||||||||||||||||||||||||||    
T  11576 atttttcccaatctc-accaatgaacaagacactcaatgattttca 11532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 640
Target Start/End: Complemental strand, 11499 - 11373
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 613  Q
    |||||||||| ||| ||||||||| ||||| ||| ||||||||||| |||| ||| |||||||||||| ||  ||||||| ||||| ||||||| ||| |    
T  11499 tagaatctaaccccaaaaagagaaacaacctttagcctttgattttactaatgatcttctcttttggtttcacaagactcacccaagttgctcagaaatg 11400  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  11399 actctccactcatgtgtttcccaaccc 11373  T

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Target: scaffold0016 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 511
Target Start/End: Complemental strand, 114726 - 114577
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||| || | |||||||| | |||||    
T  114726 attgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagcgttacaagaaattagctttgacaagttcacaaagaacaaccttaatt 114628  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | || || ||||  |||||||   | ||||||||||||||||||||||||||    
T  114627 tctaccctttttcccaatctc-accaatgaacaagacactcaatgattttca 114577  T

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Target: scaffold0053 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 368 - 453
Target Start/End: Complemental strand, 25171 - 25086
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa 453  Q
    |||||| | ||||| |||||||||||||||||||||||||||||  |||||||||||||| ||||||||| ||||| |||||||||    
T  25171 tctctacttcactatcaatgagttctttacaaagagatacaaaaaggttacaagaaattaccttcaacaaactctcaaagaacaaa 25086  T

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Target: scaffold1519 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 368 - 511
Target Start/End: Complemental strand, 1032 - 891
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| ||||||||| ||  |||||||||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || ||    
T  1032 tctccaatccactatcaatgagttgtt--caaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccc 935  T
Q  468 atttttcaatctctttccatgaacaagacactcaatgattttca 511  Q
     ||||||    |||  ||| ||||||||||||||||||||||||    
T  934 ttttttcccaatctcaccaagaacaagacactcaatgattttca 891  T

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Target: scaffold0197 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 553 - 633
Target Start/End: Original strand, 1671 - 1751
Alignment:
Q  553 tttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtgtttc 633  Q
    |||||||| |||||||| |||||||||| ||||| ||||||||||||| |||||||||| ||||||||| |||||||||||    
T  1671 tttgatttcctaaggatcttctcttttgatctcccaagactcgcccaagttgctcacaatgactctcatatgatgtgtttc 1751  T

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Target: scaffold0197; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 384 - 508
Target Start/End: Original strand, 1461 - 1585
Alignment:
Q  384 aatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctcttt 483  Q
    |||||||||||||   ||||| ||||||| ||| ||| |||| | ||||| ||||||| || ||||||||||||||||||| | ||||  |||||||||     
T  1461 aatgagttctttatgcagagaaacaaaagggttgcaaaaaatcaacttcaccaagctcacccagaacaaacctaatttttaccaatttcacaatctcttc 1560  T
Q  484 ccatgaacaagacactcaatgattt 508  Q
    |||||||||||  ||||||| ||||    
T  1561 ccatgaacaagtaactcaattattt 1585  T

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Target: scaffold0006 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 511
Target Start/End: Original strand, 149141 - 149290
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| ||||||||| |||||||||||| ||||||||||| ||| | || ||||||||||||||||||||||||  | || ||||| |||||||    
T  149141 attgatctctccaatccactatcaatgagttctt-acaaagagatataaatgggtaacaagaaattagcttcaacaagcttacaaaaaacaaccctaatt 149239  T
Q  461 tttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 511  Q
    | ||||| ||||  |||||||     ||||||||||||||||||||||||||    
T  149240 tctatccgttttcccaatctc-acaaatgaacaagacactcaatgattttca 149290  T

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Target: scaffold0066 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 461
Target Start/End: Original strand, 20459 - 20558
Alignment:
Q  361 attgatttctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 460  Q
    |||||| |||| |||||| || ||| |||||||| ||||||||||||||| | ||||||||||||||||||||||||| || | || |||||||||||||    
T  20459 attgatctctccaatccaatatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaaaaacaaacctaatt 20557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 219 - 429
Target Start/End: Complemental strand, 10758 - 10546
Alignment:
Q  219 atctagatataatctaaaaatcaagtttaaagtaaaaccacaatagaatatcaaagaataaacaagataaa-gagagtatagaaaatataaca---ccaa 314  Q
    |||||||| ||||||| ||||||||| || |||||||| |||||  |||  |||||||||||||||||||| ||||||| || ||| ||||||   ||||    
T  10758 atctagatttaatctagaaatcaagtgtatagtaaaactacaatctaat--caaagaataaacaagataaaagagagtagaggaaagataacaacaccaa 10661  T
Q  315 gaaatgttaatccagttcggtccaacaatgatctactct--nnnnnnnattgatttctctaatccactaccaatgagttctttacaaagagatacaaaag 412  Q
    |||||||| | |||||||||||||||  ||| |||||||         |||||| |||  ||||||||| ||| |||||| ||||||||||||||||||     
T  10660 gaaatgtttacccagttcggtccaac-ttgacctactctggaggagagattgatctcttcaatccactatcaacgagttc-ttacaaagagatacaaaat 10563  T
Q  413 agttacaagaaattagc 429  Q
     ||||||| ||||||||    
T  10562 ggttacaataaattagc 10546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 385 - 472
Target Start/End: Original strand, 80351 - 80437
Alignment:
Q  385 atgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 472  Q
    |||||||||| ||||| ||||||||| | ||| |||||||||||||||||||||||| | |||||||| |||||||| || |||||||    
T  80351 atgagttctt-acaaaaagatacaaatgggttgcaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttt 80437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 516 - 640
Target Start/End: Original strand, 80510 - 80636
Alignment:
Q  516 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 613  Q
    |||||||||| |||||||| |||||||||| ||| ||||||||||  |||||||| | ||||||| || ||| ||||||| ||||| |||||||| ||||    
T  80510 tagaatctaacccccaaaatagaaccaacccttagcctttgatttcactaaggatctactcttttagtttcccaagactcacccaagttgctcacaaaag 80609  T
Q  614 actctcatttgatgtgtttccaaaccc 640  Q
    ||||||   | |||||||||| |||||    
T  80610 actctccgctcatgtgtttcccaaccc 80636  T

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Target: scaffold0491 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 368 - 508
Target Start/End: Original strand, 11212 - 11352
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 467  Q
    |||| ||||||||| ||| ||||||||   ||||||||||||||| ||||||||||||||| ||  ||||| || | |||||||| |||||||| || ||    
T  11212 tctccaatccactatcaacgagttcttacaaaagagatacaaaagggttacaagaaattagattttacaagttcacaaagaacaaccctaatttctaccc 11311  T
Q  468 atttttcaatctctttccatgaacaagacactcaatgattt 508  Q
     ||| ||    |||  ||| |||||||||||||||||||||    
T  11312 ttttctcccaatctcaccaagaacaagacactcaatgattt 11352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 8786 - 8879
Alignment:
Q  368 tctctaatccactaccaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 461  Q
    |||| ||||||||| ||| ||||||||   ||||||||||||||| ||||||||||||||| ||  | ||| || | |||||||| ||||||||    
T  8786 tctccaatccactatcaacgagttcttacaaaagagatacaaaagggttacaagaaattagattttataagttcacaaagaacaaccctaattt 8879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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