View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15919_low_15 (Length: 297)
Name: NF15919_low_15
Description: NF15919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15919_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 2097402 - 2097680
Alignment:
| Q |
1 |
attgacatcaaacttctgtaaacctacttctacttccagcttgctgccagatgccactgcctcggcaagagttgcagcttcctcgtcacgaggtgcagct |
100 |
Q |
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| T |
2097402 |
attgacatcaaacttctgtaaacctacttctacttccagcttgctgccagatgccactacctcggcaagagttgcagcttcctcgtcacgaggtgcagct |
2097501 |
T |
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| Q |
101 |
acaaataggttttgattttgatagttaatgtaaagaataacaaagaaaacaatgagccataaggtcaaattgagtatagcaacaatgtttggtaaaatga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2097502 |
acaaataggttttgattttgatagttaatgtaaagaataacaaagaaaacaatgagccataaggtcaaattgagtatagcaacaatgtttggtaaaatga |
2097601 |
T |
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| Q |
201 |
ttgtcaatgctgcgaaggacacagcacatgtaagaccgtacatgagtgagattggaaacaaggtttcaatagtgatatg |
279 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2097602 |
ttgtcaacgctgcgaaggacacagcacatgtaagaccgtacatgagtgagattggaaacaaggtttcaatagtgatatg |
2097680 |
T |
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