View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15919_low_8 (Length: 412)

Name: NF15919_low_8
Description: NF15919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15919_low_8
NF15919_low_8
[»] chr8 (63 HSPs)
chr8 (18-267)||(41266946-41267196)
chr8 (291-398)||(33655548-33655655)
chr8 (273-399)||(40585541-40585666)
chr8 (54-270)||(1292441-1292656)
chr8 (134-267)||(32902231-32902364)
chr8 (163-272)||(30291579-30291689)
chr8 (136-270)||(3772167-3772300)
chr8 (157-270)||(4162475-4162585)
chr8 (71-266)||(7597592-7597790)
chr8 (157-270)||(27811253-27811366)
chr8 (275-371)||(11383830-11383927)
chr8 (136-272)||(33352123-33352258)
chr8 (136-270)||(42498168-42498302)
chr8 (168-270)||(10929774-10929876)
chr8 (157-270)||(11383962-11384073)
chr8 (136-270)||(42435051-42435183)
chr8 (174-267)||(33655402-33655494)
chr8 (136-267)||(11712060-11712192)
chr8 (163-270)||(18141796-18141902)
chr8 (136-270)||(4731633-4731766)
chr8 (136-231)||(19491759-19491853)
chr8 (136-231)||(30143354-30143448)
chr8 (136-270)||(43036398-43036531)
chr8 (167-240)||(1822296-1822370)
chr8 (167-240)||(1856741-1856815)
chr8 (157-270)||(15212761-15212874)
chr8 (136-270)||(34254391-34254523)
chr8 (275-399)||(40221560-40221686)
chr8 (275-399)||(42435218-42435344)
chr8 (140-264)||(3231859-3231984)
chr8 (275-371)||(4283368-4283465)
chr8 (54-231)||(3303647-3303824)
chr8 (163-270)||(18106164-18106271)
chr8 (136-239)||(18655405-18655508)
chr8 (136-231)||(40328793-40328888)
chr8 (163-270)||(41364933-41365040)
chr8 (127-231)||(44353807-44353910)
chr8 (136-231)||(4283538-4283632)
chr8 (136-270)||(5689246-5689379)
chr8 (136-270)||(34256567-34256699)
chr8 (136-231)||(40221759-40221853)
chr8 (152-270)||(40321055-40321173)
chr8 (157-270)||(31218231-31218345)
chr8 (173-270)||(41366710-41366807)
chr8 (275-368)||(44353639-44353733)
chr8 (173-270)||(7444914-7445011)
chr8 (275-371)||(40328623-40328720)
chr8 (157-270)||(1746298-1746412)
chr8 (163-231)||(6598986-6599054)
chr8 (163-231)||(6674439-6674507)
chr8 (157-270)||(17982627-17982741)
chr8 (168-220)||(30909393-30909445)
chr8 (165-220)||(12702722-12702777)
chr8 (164-215)||(29796409-29796460)
chr8 (136-214)||(10240185-10240263)
chr8 (173-231)||(10930295-10930353)
chr8 (157-198)||(10015128-10015169)
chr8 (152-264)||(11137007-11137118)
chr8 (136-231)||(9765759-9765853)
chr8 (298-376)||(10101402-10101480)
chr8 (180-268)||(38863847-38863936)
chr8 (136-220)||(1345431-1345514)
chr8 (275-370)||(18655246-18655341)
[»] chr4 (99 HSPs)
chr4 (269-403)||(22882974-22883109)
chr4 (269-403)||(22934638-22934773)
chr4 (70-270)||(22882744-22882944)
chr4 (70-270)||(22934408-22934608)
chr4 (54-272)||(5349879-5350100)
chr4 (85-267)||(38811198-38811379)
chr4 (136-270)||(33089853-33089987)
chr4 (286-390)||(3785915-3786019)
chr4 (89-220)||(34112842-34112973)
chr4 (157-399)||(26364080-26364324)
chr4 (148-267)||(32091456-32091575)
chr4 (138-270)||(44570427-44570564)
chr4 (149-267)||(6677446-6677565)
chr4 (70-239)||(379385-379556)
chr4 (275-399)||(41961222-41961351)
chr4 (174-270)||(47038507-47038602)
chr4 (136-270)||(24969087-24969220)
chr4 (147-214)||(26699513-26699580)
chr4 (149-220)||(34788847-34788918)
chr4 (92-270)||(35369461-35369634)
chr4 (275-399)||(50674073-50674199)
chr4 (275-371)||(12073236-12073333)
chr4 (134-270)||(54199964-54200099)
chr4 (275-371)||(379223-379319)
chr4 (136-231)||(8665422-8665516)
chr4 (136-231)||(12073406-12073500)
chr4 (157-270)||(31474125-31474239)
chr4 (278-345)||(33089758-33089825)
chr4 (288-387)||(35370578-35370677)
chr4 (136-270)||(56178697-56178830)
chr4 (173-270)||(5871795-5871892)
chr4 (87-270)||(12119513-12119698)
chr4 (275-373)||(35662284-35662381)
chr4 (275-399)||(41964230-41964355)
chr4 (136-270)||(48893698-48893835)
chr4 (136-233)||(46147451-46147547)
chr4 (278-371)||(46703344-46703437)
chr4 (178-270)||(35370449-35370541)
chr4 (163-270)||(36994499-36994606)
chr4 (136-270)||(26175696-26175829)
chr4 (158-270)||(48143017-48143130)
chr4 (157-270)||(36463469-36463582)
chr4 (149-267)||(41961395-41961513)
chr4 (147-216)||(33989873-33989942)
chr4 (136-260)||(35662426-35662549)
chr4 (85-231)||(50262708-50262855)
chr4 (275-371)||(54882864-54882961)
chr4 (157-270)||(55085445-55085557)
chr4 (163-270)||(5429654-5429761)
chr4 (136-232)||(6655969-6656064)
chr4 (152-220)||(27417040-27417108)
chr4 (275-371)||(33989706-33989802)
chr4 (163-231)||(52467440-52467508)
chr4 (147-270)||(53345192-53345315)
chr4 (136-231)||(9927518-9927612)
chr4 (158-233)||(21688261-21688336)
chr4 (136-270)||(34570474-34570607)
chr4 (136-270)||(37740600-37740733)
chr4 (275-341)||(50262925-50262992)
chr4 (136-231)||(54883034-54883128)
chr4 (85-231)||(2209727-2209875)
chr4 (275-399)||(6655771-6655897)
chr4 (157-270)||(52095442-52095555)
chr4 (275-399)||(55085592-55085718)
chr4 (275-355)||(2209573-2209654)
chr4 (54-270)||(6542156-6542374)
chr4 (278-371)||(12119383-12119475)
chr4 (163-267)||(12739636-12739740)
chr4 (163-267)||(12747842-12747946)
chr4 (131-220)||(16422661-16422750)
chr4 (54-267)||(21703812-21704027)
chr4 (136-212)||(4587992-4588067)
chr4 (269-392)||(6200085-6200209)
chr4 (276-371)||(8665251-8665347)
chr4 (286-398)||(35369679-35369790)
chr4 (147-270)||(48142448-48142571)
chr4 (136-200)||(50673907-50673970)
chr4 (163-270)||(29999893-29999999)
chr4 (136-231)||(40632459-40632553)
chr4 (157-231)||(8648153-8648227)
chr4 (166-220)||(22628984-22629038)
chr4 (147-267)||(44967900-44968020)
chr4 (163-220)||(6199961-6200018)
chr4 (181-269)||(3677438-3677526)
chr4 (276-371)||(8647982-8648078)
chr4 (163-231)||(41639440-41639508)
chr4 (157-220)||(46703525-46703589)
chr4 (158-233)||(13992373-13992448)
chr4 (276-341)||(27417189-27417255)
chr4 (157-231)||(41639277-41639351)
chr4 (178-268)||(3739203-3739295)
chr4 (136-220)||(12743985-12744068)
chr4 (136-220)||(12744107-12744190)
chr4 (136-220)||(12745374-12745457)
chr4 (54-118)||(24969793-24969856)
chr4 (164-220)||(28684899-28684955)
chr4 (172-212)||(39662348-39662388)
chr4 (275-319)||(40632342-40632386)
chr4 (168-220)||(51904499-51904551)
[»] chr3 (84 HSPs)
chr3 (136-270)||(35138765-35138899)
chr3 (75-270)||(8166456-8166651)
chr3 (131-270)||(26323128-26323267)
chr3 (147-266)||(20937635-20937754)
chr3 (136-270)||(51398789-51398922)
chr3 (289-399)||(34795685-34795795)
chr3 (173-270)||(3148087-3148184)
chr3 (287-391)||(20937481-20937585)
chr3 (85-254)||(4055771-4055941)
chr3 (54-268)||(32891080-32891295)
chr3 (163-270)||(53921589-53921696)
chr3 (136-270)||(7762240-7762373)
chr3 (275-371)||(34491057-34491154)
chr3 (178-270)||(39127522-39127614)
chr3 (163-270)||(39153447-39153554)
chr3 (136-275)||(40735353-40735491)
chr3 (157-260)||(46860459-46860562)
chr3 (136-231)||(34491226-34491320)
chr3 (136-270)||(44331520-44331653)
chr3 (157-270)||(5236536-5236649)
chr3 (147-269)||(5373207-5373331)
chr3 (275-399)||(6095826-6095952)
chr3 (131-225)||(25491022-25491116)
chr3 (275-371)||(49199697-49199795)
chr3 (147-267)||(1313875-1313996)
chr3 (286-367)||(1683336-1683417)
chr3 (275-371)||(30235969-30236066)
chr3 (163-270)||(22835088-22835195)
chr3 (132-220)||(24635282-24635370)
chr3 (163-270)||(31314420-31314527)
chr3 (275-393)||(36018672-36018792)
chr3 (163-270)||(40734473-40734580)
chr3 (275-403)||(46860282-46860413)
chr3 (136-270)||(7764442-7764572)
chr3 (278-353)||(26323306-26323381)
chr3 (136-270)||(30236101-30236233)
chr3 (136-270)||(44700538-44700671)
chr3 (275-399)||(40913154-40913280)
chr3 (85-231)||(43401808-43401956)
chr3 (171-270)||(9666560-9666660)
chr3 (275-399)||(47304067-47304192)
chr3 (163-270)||(760822-760929)
chr3 (157-270)||(5258224-5258338)
chr3 (148-270)||(5433947-5434071)
chr3 (90-264)||(1683457-1683630)
chr3 (136-231)||(4569966-4570060)
chr3 (136-270)||(45095139-45095271)
chr3 (157-220)||(46173382-46173445)
chr3 (134-264)||(2020129-2020250)
chr3 (275-399)||(4569766-4569892)
chr3 (278-399)||(5434108-5434230)
chr3 (163-232)||(32744522-32744590)
chr3 (189-270)||(40612582-40612663)
chr3 (189-270)||(40612786-40612867)
chr3 (157-270)||(5260403-5260517)
chr3 (134-270)||(23200196-23200330)
chr3 (136-270)||(29196446-29196580)
chr3 (157-220)||(36018877-36018941)
chr3 (135-207)||(41510300-41510372)
chr3 (171-231)||(43403839-43403899)
chr3 (136-231)||(49199529-49199624)
chr3 (136-220)||(54593729-54593812)
chr3 (163-230)||(9581297-9581364)
chr3 (136-231)||(19683949-19684043)
chr3 (316-391)||(35138975-35139050)
chr3 (136-270)||(37408433-37408566)
chr3 (289-344)||(39127418-39127473)
chr3 (157-220)||(50432734-50432797)
chr3 (157-211)||(31340281-31340335)
chr3 (136-212)||(33191865-33191939)
chr3 (275-371)||(54593549-54593645)
chr3 (136-240)||(54739013-54739117)
chr3 (163-231)||(29682373-29682441)
chr3 (136-220)||(29810893-29810976)
chr3 (173-233)||(29813075-29813135)
chr3 (275-371)||(41819751-41819846)
chr3 (157-200)||(28253347-28253390)
chr3 (166-264)||(37761559-37761658)
chr3 (127-223)||(54744300-54744396)
chr3 (289-371)||(55302206-55302289)
chr3 (163-220)||(23391995-23392052)
chr3 (355-392)||(26323821-26323858)
chr3 (78-122)||(21334747-21334791)
chr3 (70-122)||(41819515-41819567)
[»] chr5 (63 HSPs)
chr5 (85-267)||(35616147-35616329)
chr5 (86-270)||(10700658-10700841)
chr5 (87-267)||(316740-316922)
chr5 (136-267)||(10054876-10055006)
chr5 (273-403)||(316577-316705)
chr5 (54-266)||(16452059-16452271)
chr5 (275-371)||(5057891-5057988)
chr5 (131-219)||(32609561-32609649)
chr5 (59-267)||(30802807-30803014)
chr5 (136-270)||(42309995-42310128)
chr5 (275-393)||(14689639-14689756)
chr5 (275-399)||(40147076-40147202)
chr5 (136-270)||(13239726-13239859)
chr5 (147-263)||(3325895-3326011)
chr5 (137-270)||(33906091-33906220)
chr5 (304-392)||(33906286-33906374)
chr5 (275-370)||(16641168-16641263)
chr5 (59-186)||(30793195-30793322)
chr5 (136-270)||(33831655-33831788)
chr5 (136-270)||(39468609-39468742)
chr5 (136-231)||(40147275-40147369)
chr5 (275-399)||(27015347-27015473)
chr5 (163-270)||(8566032-8566139)
chr5 (147-270)||(13695761-13695884)
chr5 (131-219)||(32579250-32579338)
chr5 (137-196)||(8445764-8445823)
chr5 (136-270)||(13488178-13488311)
chr5 (277-371)||(4160477-4160571)
chr5 (136-270)||(25412736-25412868)
chr5 (157-231)||(38747019-38747093)
chr5 (275-371)||(38746849-38746946)
chr5 (163-270)||(5887502-5887609)
chr5 (157-270)||(36074122-36074238)
chr5 (136-231)||(213479-213573)
chr5 (136-270)||(533744-533877)
chr5 (152-231)||(28278330-28278409)
chr5 (136-270)||(42426295-42426428)
chr5 (136-270)||(42428490-42428623)
chr5 (157-270)||(538000-538113)
chr5 (131-220)||(8038221-8038311)
chr5 (134-235)||(14689484-14689585)
chr5 (173-270)||(31182948-31183044)
chr5 (116-225)||(32583322-32583431)
chr5 (163-270)||(3075744-3075851)
chr5 (157-270)||(13343035-13343149)
chr5 (157-270)||(30182563-30182676)
chr5 (157-197)||(30683004-30683044)
chr5 (136-239)||(16409480-16409583)
chr5 (178-267)||(19806361-19806449)
chr5 (275-399)||(213284-213406)
chr5 (175-226)||(5007569-5007621)
chr5 (157-213)||(16641017-16641073)
chr5 (136-220)||(26177906-26177990)
chr5 (136-220)||(37439166-37439249)
chr5 (157-200)||(9049422-9049465)
chr5 (136-239)||(18441708-18441811)
chr5 (132-211)||(32576353-32576431)
chr5 (157-196)||(42926916-42926955)
chr5 (186-220)||(4160656-4160690)
chr5 (157-260)||(27637692-27637796)
chr5 (136-231)||(5058061-5058153)
chr5 (275-339)||(8019464-8019526)
chr5 (164-220)||(26170797-26170853)
[»] chr1 (88 HSPs)
chr1 (87-392)||(12318533-12318826)
chr1 (131-254)||(16914229-16914353)
chr1 (275-399)||(41135636-41135760)
chr1 (130-270)||(25652061-25652201)
chr1 (147-218)||(6808479-6808550)
chr1 (133-267)||(1050500-1050634)
chr1 (157-270)||(10925198-10925311)
chr1 (148-267)||(9109491-9109610)
chr1 (136-270)||(31659213-31659346)
chr1 (157-270)||(46064893-46065006)
chr1 (173-270)||(13138072-13138167)
chr1 (85-270)||(47255347-47255532)
chr1 (54-270)||(15820282-15820498)
chr1 (275-399)||(19754306-19754435)
chr1 (147-254)||(22079307-22079414)
chr1 (275-371)||(34602567-34602663)
chr1 (275-371)||(34603420-34603516)
chr1 (136-270)||(3156840-3156973)
chr1 (163-269)||(4552723-4552829)
chr1 (136-270)||(49918325-49918458)
chr1 (275-399)||(47114986-47115112)
chr1 (157-270)||(50169290-50169403)
chr1 (275-371)||(11348542-11348639)
chr1 (275-371)||(31925933-31926030)
chr1 (163-270)||(8550873-8550980)
chr1 (147-270)||(37282762-37282884)
chr1 (275-403)||(28242199-28242329)
chr1 (173-270)||(37503650-37503747)
chr1 (85-220)||(42297982-42298118)
chr1 (275-371)||(193455-193552)
chr1 (131-220)||(4535535-4535624)
chr1 (275-399)||(7482459-7482583)
chr1 (275-371)||(29136091-29136188)
chr1 (163-270)||(834253-834360)
chr1 (137-213)||(3460728-3460804)
chr1 (136-220)||(11348723-11348806)
chr1 (136-270)||(28220286-28220419)
chr1 (136-270)||(28265614-28265747)
chr1 (136-231)||(41360928-41361022)
chr1 (157-270)||(193587-193699)
chr1 (157-231)||(29136261-29136335)
chr1 (275-399)||(37168112-37168238)
chr1 (275-399)||(37879138-37879264)
chr1 (54-208)||(2262950-2263106)
chr1 (275-371)||(13547316-13547413)
chr1 (275-371)||(13549227-13549324)
chr1 (275-371)||(19752529-19752626)
chr1 (136-233)||(19754507-19754603)
chr1 (275-371)||(37033300-37033397)
chr1 (163-270)||(196994-197101)
chr1 (163-270)||(3189305-3189412)
chr1 (163-270)||(3198122-3198229)
chr1 (163-270)||(3206961-3207068)
chr1 (173-270)||(19752661-19752758)
chr1 (163-270)||(44455135-44455242)
chr1 (136-270)||(45644414-45644548)
chr1 (136-231)||(13547149-13547243)
chr1 (136-270)||(31925767-31925899)
chr1 (152-214)||(928051-928113)
chr1 (275-393)||(22079144-22079261)
chr1 (134-270)||(37559926-37560062)
chr1 (133-267)||(41135798-41135932)
chr1 (275-399)||(42298202-42298328)
chr1 (132-220)||(1485825-1485914)
chr1 (134-230)||(7482288-7482384)
chr1 (174-231)||(37033170-37033227)
chr1 (173-260)||(34603561-34603648)
chr1 (164-220)||(36683715-36683771)
chr1 (136-231)||(37168311-37168406)
chr1 (85-254)||(13938128-13938298)
chr1 (158-270)||(20762646-20762759)
chr1 (136-270)||(28223481-28223614)
chr1 (173-220)||(37879007-37879054)
chr1 (275-341)||(47255567-47255634)
chr1 (163-233)||(40122284-40122354)
chr1 (152-220)||(47115196-47115265)
chr1 (134-270)||(6398621-6398756)
chr1 (299-398)||(9109653-9109753)
chr1 (163-270)||(16455597-16455703)
chr1 (136-220)||(32471486-32471569)
chr1 (157-220)||(13316432-13316495)
chr1 (148-267)||(33775887-33776006)
chr1 (152-270)||(44650238-44650356)
chr1 (152-270)||(50167250-50167368)
chr1 (137-195)||(5459956-5460013)
chr1 (169-211)||(43342389-43342431)
chr1 (85-122)||(28242428-28242465)
chr1 (168-261)||(41053280-41053378)
[»] chr2 (61 HSPs)
chr2 (70-267)||(30218036-30218235)
chr2 (70-270)||(33648145-33648348)
chr2 (133-220)||(42261542-42261629)
chr2 (131-264)||(41454215-41454348)
chr2 (85-215)||(24398087-24398219)
chr2 (131-270)||(41446113-41446253)
chr2 (136-270)||(17057429-17057562)
chr2 (136-270)||(17085412-17085545)
chr2 (136-270)||(36773537-36773670)
chr2 (275-399)||(1631959-1632085)
chr2 (275-399)||(45726744-45726870)
chr2 (312-393)||(42261875-42261956)
chr2 (147-270)||(7597081-7597205)
chr2 (136-270)||(2334478-2334611)
chr2 (136-270)||(36318069-36318202)
chr2 (157-270)||(4503212-4503326)
chr2 (275-399)||(42288337-42288463)
chr2 (163-270)||(723830-723937)
chr2 (163-270)||(11690476-11690583)
chr2 (157-270)||(36205744-36205857)
chr2 (163-270)||(42362327-42362434)
chr2 (157-270)||(45099729-45099843)
chr2 (136-270)||(1631792-1631924)
chr2 (129-247)||(34811274-34811393)
chr2 (152-267)||(42019948-42020063)
chr2 (136-270)||(5723316-5723448)
chr2 (163-272)||(33162536-33162645)
chr2 (173-270)||(34139867-34139964)
chr2 (275-399)||(35447111-35447237)
chr2 (157-270)||(38312215-38312328)
chr2 (54-270)||(12123562-12123777)
chr2 (163-270)||(14633912-14634019)
chr2 (136-270)||(29867844-29867977)
chr2 (136-270)||(36988136-36988269)
chr2 (157-199)||(7815353-7815395)
chr2 (181-270)||(17450566-17450655)
chr2 (164-270)||(24885636-24885742)
chr2 (157-231)||(42288190-42288264)
chr2 (164-270)||(17490235-17490335)
chr2 (163-239)||(26353189-26353266)
chr2 (167-259)||(36271651-36271744)
chr2 (286-371)||(43730992-43731076)
chr2 (136-220)||(6595066-6595149)
chr2 (163-231)||(11151677-11151745)
chr2 (171-231)||(14202499-14202559)
chr2 (275-370)||(17450436-17450531)
chr2 (136-231)||(45726943-45727037)
chr2 (163-225)||(3897010-3897072)
chr2 (136-220)||(4484390-4484474)
chr2 (311-371)||(24397902-24397962)
chr2 (180-220)||(35214268-35214308)
chr2 (136-220)||(35446944-35447027)
chr2 (173-270)||(13121744-13121841)
chr2 (136-267)||(30833323-30833454)
chr2 (157-220)||(32289588-32289651)
chr2 (157-270)||(11067280-11067393)
chr2 (281-399)||(30218269-30218386)
chr2 (129-219)||(36282968-36283060)
chr2 (163-235)||(2869639-2869711)
chr2 (152-196)||(4561137-4561181)
chr2 (157-197)||(7451166-7451206)
[»] scaffold0002 (3 HSPs)
scaffold0002 (133-220)||(490377-490464)
scaffold0002 (312-393)||(490710-490791)
scaffold0002 (136-270)||(434507-434641)
[»] scaffold0219 (1 HSPs)
scaffold0219 (54-267)||(27418-27634)
[»] chr6 (45 HSPs)
chr6 (275-372)||(603307-603405)
chr6 (136-267)||(25073546-25073677)
chr6 (136-270)||(28137468-28137601)
chr6 (131-241)||(5740052-5740162)
chr6 (275-371)||(26830351-26830448)
chr6 (136-231)||(2972999-2973093)
chr6 (157-220)||(5043652-5043715)
chr6 (136-270)||(9183091-9183224)
chr6 (275-399)||(2973166-2973292)
chr6 (275-399)||(5043442-5043568)
chr6 (163-260)||(17762975-17763072)
chr6 (136-270)||(26954346-26954478)
chr6 (149-267)||(186691-186810)
chr6 (275-367)||(21593514-21593605)
chr6 (136-231)||(17758037-17758131)
chr6 (136-231)||(21588945-21589039)
chr6 (136-231)||(21593678-21593772)
chr6 (136-270)||(26830183-26830316)
chr6 (275-399)||(17762804-17762930)
chr6 (164-225)||(27106178-27106239)
chr6 (164-225)||(27147984-27148045)
chr6 (157-270)||(30834616-30834730)
chr6 (136-270)||(5406260-5406392)
chr6 (136-270)||(5410585-5410717)
chr6 (136-270)||(31404735-31404867)
chr6 (275-399)||(3808936-3809061)
chr6 (136-270)||(5413454-5413586)
chr6 (85-211)||(603096-603222)
chr6 (131-220)||(12221158-12221247)
chr6 (136-270)||(4045398-4045532)
chr6 (173-233)||(22424923-22424983)
chr6 (286-341)||(22425065-22425119)
chr6 (157-270)||(3038983-3039096)
chr6 (273-371)||(5741016-5741114)
chr6 (275-373)||(11660450-11660546)
chr6 (136-220)||(3808768-3808852)
chr6 (168-220)||(14563756-14563808)
chr6 (173-239)||(16569038-16569106)
chr6 (323-403)||(25072996-25073076)
chr6 (70-122)||(26800711-26800763)
chr6 (157-220)||(33160432-33160495)
chr6 (78-123)||(4641089-4641134)
chr6 (164-233)||(6097528-6097596)
chr6 (136-204)||(2908499-2908567)
chr6 (172-200)||(26800632-26800660)
[»] scaffold0466 (2 HSPs)
scaffold0466 (275-371)||(7172-7269)
scaffold0466 (136-270)||(7303-7435)
[»] scaffold0197 (2 HSPs)
scaffold0197 (312-392)||(1671-1751)
scaffold0197 (92-267)||(1411-1585)
[»] chr7 (78 HSPs)
chr7 (296-376)||(23794074-23794154)
chr7 (131-220)||(43363526-43363617)
chr7 (136-270)||(30024792-30024925)
chr7 (136-270)||(47674003-47674136)
chr7 (157-270)||(1113632-1113745)
chr7 (275-371)||(2390126-2390223)
chr7 (85-267)||(3904624-3904808)
chr7 (134-267)||(5116582-5116715)
chr7 (275-371)||(34310943-34311040)
chr7 (167-267)||(1360243-1360343)
chr7 (136-231)||(2361032-2361126)
chr7 (136-270)||(26417291-26417424)
chr7 (136-270)||(27347792-27347925)
chr7 (136-231)||(29608751-29608845)
chr7 (136-270)||(48491554-48491687)
chr7 (275-399)||(2361199-2361324)
chr7 (275-399)||(4512617-4512743)
chr7 (85-213)||(22328397-22328527)
chr7 (157-270)||(31733049-31733162)
chr7 (157-231)||(48599414-48599488)
chr7 (275-371)||(6360139-6360236)
chr7 (153-270)||(29991029-29991145)
chr7 (275-371)||(48599561-48599658)
chr7 (157-233)||(2390294-2390370)
chr7 (136-231)||(6431985-6432079)
chr7 (136-231)||(22269987-22270081)
chr7 (164-270)||(23555014-23555121)
chr7 (152-270)||(43864219-43864337)
chr7 (163-268)||(26639297-26639402)
chr7 (275-399)||(29608551-29608677)
chr7 (157-270)||(31518770-31518883)
chr7 (157-270)||(47676216-47676329)
chr7 (275-371)||(6431815-6431912)
chr7 (136-220)||(23565121-23565205)
chr7 (163-270)||(31105479-31105586)
chr7 (136-212)||(36574575-36574651)
chr7 (265-391)||(1360371-1360497)
chr7 (136-270)||(18126619-18126752)
chr7 (136-270)||(35853889-35854022)
chr7 (157-270)||(8153317-8153430)
chr7 (286-403)||(22328637-22328755)
chr7 (157-231)||(48489445-48489519)
chr7 (59-267)||(40808567-40808774)
chr7 (136-267)||(4586139-4586269)
chr7 (163-270)||(12097945-12098052)
chr7 (136-270)||(36146468-36146601)
chr7 (163-270)||(41649097-41649203)
chr7 (316-392)||(43363683-43363759)
chr7 (136-231)||(496043-496137)
chr7 (136-219)||(2759257-2759339)
chr7 (147-214)||(4253599-4253666)
chr7 (157-220)||(4508786-4508849)
chr7 (136-270)||(14069893-14070026)
chr7 (136-270)||(14379921-14380054)
chr7 (136-266)||(19502156-19502286)
chr7 (134-193)||(27073868-27073927)
chr7 (134-193)||(27204386-27204445)
chr7 (275-365)||(3258846-3258935)
chr7 (275-399)||(4510775-4510901)
chr7 (85-231)||(8359323-8359471)
chr7 (157-215)||(23344005-23344063)
chr7 (166-270)||(24525985-24526090)
chr7 (54-123)||(31519027-31519094)
chr7 (157-205)||(6360032-6360080)
chr7 (163-231)||(25615867-25615935)
chr7 (136-200)||(32358114-32358177)
chr7 (163-231)||(34310802-34310870)
chr7 (136-231)||(4510608-4510702)
chr7 (136-231)||(4512450-4512544)
chr7 (164-270)||(4538627-4538733)
chr7 (136-239)||(39731374-39731477)
chr7 (275-399)||(4508933-4509059)
chr7 (181-270)||(5514113-5514202)
chr7 (127-187)||(9432446-9432504)
chr7 (275-359)||(22269829-22269914)
chr7 (297-350)||(22552683-22552736)
chr7 (149-220)||(18396342-18396413)
chr7 (54-122)||(31105370-31105437)
[»] scaffold0053 (1 HSPs)
scaffold0053 (132-212)||(25086-25166)
[»] scaffold0014 (2 HSPs)
scaffold0014 (275-399)||(80510-80636)
scaffold0014 (163-231)||(80369-80437)
[»] scaffold1519 (1 HSPs)
scaffold1519 (157-270)||(891-1004)
[»] scaffold0286 (2 HSPs)
scaffold0286 (136-270)||(11532-11665)
scaffold0286 (275-399)||(11373-11499)
[»] scaffold0176 (1 HSPs)
scaffold0176 (152-220)||(18078-18146)
[»] scaffold0066 (1 HSPs)
scaffold0066 (157-220)||(20495-20558)
[»] scaffold0016 (1 HSPs)
scaffold0016 (136-270)||(114577-114710)
[»] scaffold0491 (1 HSPs)
scaffold0491 (136-267)||(11221-11352)
[»] scaffold0477 (1 HSPs)
scaffold0477 (78-123)||(6981-7026)


Alignment Details
Target: chr8 (Bit Score: 176; Significance: 1e-94; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 41267196 - 41266946
Alignment:
Q  18 ataagaatcaagtgtaagtcacaaaatcacaagcaaaagataaacaaacactccaataaatgtttgtccagttcggtccaacaatgacctactcttgggg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41267196 ataagaatcaagtgtaagtcacaaaatcacaagcaaaagataaacaaacactccaataaatgtttgtccagttcggtccaacaatgacctattcttgggg 41267097  T
Q  118 agagaggcattttcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaaccta 216  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||| |||||| |||||||    
T  41267096 agagagacgttttcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagtctcaacaagttctctaagaacaaaaccta 41266997  T
Q  217 atttttatccatttt-tcaatctctttccatgaacaagacactcaatgattt 267  Q
    |||| || ||||||| |||| ||||| | | |||||||| ||||||||||||    
T  41266996 atttcta-ccattttctcaaactcttcctaagaacaagagactcaatgattt 41266946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 291 - 398
Target Start/End: Original strand, 33655548 - 33655655
Alignment:
Q  291 aaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtgtt 390  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||||||| |||||||||| || |||||||||||||||||||| ||| ||| |||||||    
T  33655548 aaagagaaccaacccttaacctttgattttctaaggatcttctcttttgttctcctaagattcacccaaattgctcacaaagacactcctttaatgtgtt 33655647  T
Q  391 tccaaacc 398  Q
    ||||||||    
T  33655648 tccaaacc 33655655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 273 - 399
Target Start/End: Complemental strand, 40585666 - 40585541
Alignment:
Q  273 tttagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaag 372  Q
    |||||||||||  ||||||||||||||||||| |||  ||||||||| |||||||| |||||||||||||| | || |||| ||||||||||||||||||    
T  40585666 tttagaatctac-ccccaaaagagaaccaacccttagtctttgatttcctaaggatcttctcttttggtctaccaatactcacccaaattgctcacaaag 40585568  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    |||||| |||||||||||| |||||||    
T  40585567 actctcctttgatgtgttttcaaaccc 40585541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 1292441 - 1292656
Alignment:
Q  54 aagataaacaaacactccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagagaggcattt-tcacttc-actatcaagaagttc 151  Q
    |||| |||||||||| |||| ||||||||| |||||||||||||||  ||||||||||| |||||||||   |||| |||  || ||||||||  |||||    
T  1292441 aagagaaacaaacacaccaagaaatgtttgcccagttcggtccaact-tgacctactct-ggggagagatttatttctcaaatccactatcaatgagttc 1292538  T
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaac 250  Q
    || | ||||| ||||||| |||||||||||||||||||||||||||||| | |||||||||| |||||| || ||||||| ||||||||   | | ||||    
T  1292539 tt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaacttaatttctacccattttctcaatctc-accaaagaac 1292636  T
Q  251 aagacactcaatgattttca 270  Q
    |||||||||||| |||||||    
T  1292637 aagacactcaataattttca 1292656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 134 - 267
Target Start/End: Original strand, 32902231 - 32902364
Alignment:
Q  134 ttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc 233  Q
    |||||||||||  | ||||||||||||| |||||||| ||||||||||||||||||||||||   |||||| |||||||| |||||| || |||||| ||    
T  32902231 ttcactatcaatgaattctttagaaagagatacaaaaaagttacaagaaattagcttcaacagagtctccatgaacaaacataatttctacccatttatc 32902330  T
Q  234 aatctctttccatgaacaagacactcaatgattt 267  Q
    |||||| |  ||||| ||||| ||||||||||||    
T  32902331 aatctcctctcatgatcaagagactcaatgattt 32902364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 163 - 272
Target Start/End: Complemental strand, 30291689 - 30291579
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatccatttt-tcaatctctttccatgaacaagacactca 260  Q
    ||||||| |||||||||||||||||||||||||||||| | |||||| ||||||||||| || ||||||| ||||||||   | ||||||||||||||||    
T  30291689 atacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacctaatttctacccattttctcaatctc-accaatgaacaagacactca 30291591  T
Q  261 atgattttcaat 272  Q
    ||||||||||||    
T  30291590 atgattttcaat 30291579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 3772300 - 3772167
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    ||||||||| || ||||| | ||||| ||||||| |||||||||||||||||||| || |||||| | ||||||||||||||||| |||| ||||| |||    
T  3772300 cactatcaataaattctt-acaaagatatacaaatgagttacaagaaattagcttaaataagctcacaaagaacaaacctaatttctatcaattttctca 3772202  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | |||||||||||||||||| |||||||    
T  3772201 atctc-accaatgaacaagacactcaatcattttca 3772167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 4162585 - 4162475
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagaca 256  Q
    ||||| ||||||| ||||||||||||||||||||||||||| |||| |||||||||||||| || || ||||||| |  || ||    ||||||||||||    
T  4162585 aaagagatacaaatgagttacaagaaattagcttcaacaagttctcaaagaacaaacctaacttctacccattttcctctcact---aatgaacaagaca 4162489  T
Q  257 ctcaatgattttca 270  Q
    ||||||||||||||    
T  4162488 ctcaatgattttca 4162475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 266
Target Start/End: Complemental strand, 7597790 - 7597592
Alignment:
Q  71 caataaatgtttgtccagttcggtccaacaatgacctactcttggggagagaggcatttt--cacttcactatcaagaagttctttagaaagaaatacaa 168  Q
    |||||||| ||| |||||||||||| |||||||||||||| | |||||||||   || |   || | |||||||||    ||||||| ||||| ||||||    
T  7597790 caataaatatttatccagttcggtctaacaatgacctactatgggggagagattgatctctccaatccactatcaatgcattctttacaaagagatacaa 7597691  T
Q  169 aagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccatttttcaatctctttccatgaacaagacactcaatgatt 266  Q
    |||  ||| ||||||||||||||||||||||||||||||||||| ||| |||| |   | |||| ||||||||| ||| |||||| | |||||||||||    
T  7597690 aaggattataagaaattagcttcaacaagctctccaagaacaaaacctgatttattctctttttccaatctcttcccaagaacaaaagactcaatgatt 7597592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 27811366 - 27811253
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagac 255  Q
    ||||| ||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||  |||||||   | |||||||||||    
T  27811366 aaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctc-accaatgaacaagac 27811268  T
Q  256 actcaatgattttca 270  Q
    |||||||||||||||    
T  27811267 actcaatgattttca 27811253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 11383927 - 11383830
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  11383927 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 11383830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 136 - 272
Target Start/End: Complemental strand, 33352258 - 33352123
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||| ||||||||| || | |||||||| ||||||||||| |||||||  ||    
T  33352258 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattaggttcaacaagttcacaaagaacaaccctaatttttacccattttccca 33352160  T
Q  235 atctctttccatgaacaagacactcaatgattttcaat 272  Q
    |||||   | ||||||||||||||||||||||||||||    
T  33352159 atctc-accaatgaacaagacactcaatgattttcaat 33352123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 42498302 - 42498168
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt--c 233  Q
    |||||||||  ||||||| | ||||||||||||||| ||||||||||||||||||||||||| || | |||||||| |||||||| || |  |||||  |    
T  42498302 cactatcaatgagttctt-acaaagaaatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacctttttttccc 42498204  T
Q  234 aatctctttccatgaacaagacactcaatgattttca 270  Q
    ||||||   | ||||||||||||||||||||||||||    
T  42498203 aatctc-accaatgaacaagacactcaatgattttca 42498168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 10929876 - 10929774
Alignment:
Q  168 aaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttca-atctctttccatgaacaagacactcaatgatt 266  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||| || ||||||| || |||||   | | ||||||||||||||||||||    
T  10929876 aaagagttacaagaaattagcttcaacaagctcacaaagaacaaacataatttctacccattttccatatctc-accaaagaacaagacactcaatgatt 10929778  T
Q  267 ttca 270  Q
    ||||    
T  10929777 ttca 10929774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 11384073 - 11383962
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt-caatctctttccatgaacaagac 255  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||| | |||||||| |||||||| || |||||||| ||||||| |   |||||||||||    
T  11384073 aaagagatacaaatgagttacaagaaattagcttcaacaaactcacaaagaacaaccctaatttctacccatttttccaatctcat--aatgaacaagac 11383976  T
Q  256 actcaatgattttca 270  Q
    |||| ||||||||||    
T  11383975 actc-atgattttca 11383962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 42435051 - 42435183
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-a 234  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||| || ||||||||| |    
T  42435051 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttttcca 42435149  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||| ||||||||||    
T  42435150 atctcac-caatgaacaagacactc-atgattttca 42435183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 267
Target Start/End: Original strand, 33655402 - 33655494
Alignment:
Q  174 ttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattt 267  Q
    |||| |||||| ||||||||||| ||||| ||||||||| ||||||| |||| |||| | ||| || |||||||||||||||||||||||||||    
T  33655402 ttacgagaaatcagcttcaacaaactctctaagaacaaatctaatttctatctatttcttaatatc-ttccatgaacaagacactcaatgattt 33655494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 11712060 - 11712192
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatccatttttca 234  Q
    |||||||||  |||| |||| ||||| ||| ||||| ||| |||||||||||||||||||||||||| | |||| ||||||||||| |||   ||| |||    
T  11712060 cactatcaatgagttatttacaaagagatataaaagggtttcaagaaattagcttcaacaagctctcaaggaacaaaacctaatttatattattttctca 11712159  T
Q  235 atctctttccatgaacaagacactcaatgattt 267  Q
    ||||||| | | |||||| | ||||||||||||    
T  11712160 atctcttccaaagaacaaaagactcaatgattt 11712192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 18141902 - 18141796
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | |||||||||||||||||||||||||||| | |||||| |||||||||| || |||||||  |||||||   | |||||||||||||||||    
T  18141902 atacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aacctaatttctacccattttcacaatctc-accaatgaacaagacactcaa 18141805  T
Q  262 tgattttca 270  Q
    |||||||||    
T  18141804 tgattttca 18141796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 4731766 - 4731633
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||| |||||||||||| | |||| ||| |||||||| || |||||||  ||    
T  4731766 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattaggttcaacaagctcacaaagagcaaccctaatttctacccattttccca 4731668  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  4731667 atctc-accaatgaacaagacactcaatgattttca 4731633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 19491759 - 19491853
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||| |||||||||||| | ||||||||||||||||| || |||||||    
T  19491759 cactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaacctaatttctacccatttt 19491853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 30143448 - 30143354
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||    
T  30143448 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttt 30143354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 43036531 - 43036398
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| || |||||||||||||| ||||||||| || | |||||||| |||||||| || |||||||  ||    
T  43036531 cactatcaatgagttctt-acaaagagatacaaatgaattacaagaaattagtttcaacaagttcacaaagaacaaccctaatttctacccattttccca 43036433  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  43036432 atctc-accaatgaacaagacactcaatgattttca 43036398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 1822370 - 1822296
Alignment:
Q  167 aaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc-taatttttatccatttttcaatctct 240  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||| |||||| ||||| |||| ||||||||    
T  1822370 aaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccataatttctatcctttttgcaatctct 1822296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 1856815 - 1856741
Alignment:
Q  167 aaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc-taatttttatccatttttcaatctct 240  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||| |||||| ||||| |||| ||||||||    
T  1856815 aaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccataatttctatcctttttgcaatctct 1856741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 15212874 - 15212761
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagac 255  Q
    ||||| ||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||| || |||||||  |||||||   | |||||||||||    
T  15212874 aaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctc-accaatgaacaagac 15212776  T
Q  256 actcaatgattttca 270  Q
    | |||||||||||||    
T  15212775 attcaatgattttca 15212761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 34254391 - 34254523
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 235  Q
    ||||||||| |||||||| | ||||| ||||||||| |||||||||||||| |||  ||||| || | |||||||| |||||||| || || |||  |||    
T  34254391 cactatcaataagttctt-acaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaaccctaatttctacccttttcccaa 34254489  T
Q  236 tctctttccatgaacaagacactcaatgattttca 270  Q
    ||||   | ||||||||||||||||||||||||||    
T  34254490 tctc-accaatgaacaagacactcaatgattttca 34254523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 399
Target Start/End: Complemental strand, 40221686 - 40221560
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 372  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| |   ||||||| || || |||||||| ||||    
T  40221686 tagaatctaacccccaaaagagaaccaacctttagcctttgatttcactaaggatcttctcttttggttttacaagactcacctaagttgctcacaaaag 40221587  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  40221586 actctccactcatgtgtttcccaaccc 40221560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 42435218 - 42435344
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 372  Q
    |||||||||| || |||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| | ||| |||||||| ||||    
T  42435218 tagaatctaaccctcaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcactcaagttgctcacaaaag 42435317  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||  || || ||||||| |||||    
T  42435318 actctccattcatatgtttcccaaccc 42435344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 264
Target Start/End: Original strand, 3231859 - 3231984
Alignment:
Q  140 atcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccatttttcaatct 238  Q
    ||||| |||||||||| ||||| ||||||||  |||| || |||||||||||||||||||| | ||||||||| |||||||| ||    ||| |||||||    
T  3231859 atcaataagttctttacaaagagatacaaaatggttaaaaaaaattagcttcaacaagctcacgaagaacaaagcctaatttctacatttttctcaatct 3231958  T
Q  239 ctttccatgaacaagacactcaatga 264  Q
    ||| | | |||||||| |||||||||    
T  3231959 cttcctaagaacaagagactcaatga 3231984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 4283465 - 4283368
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  |||||||  |||| || ||||||||    
T  4283465 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcaaccaagtttctcacaaa 4283368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 54 - 231
Target Start/End: Original strand, 3303647 - 3303824
Alignment:
Q  54 aagataaacaaacactccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagagaggcattt--tcacttcactatcaagaagttc 151  Q
    |||| |||||||||| ||||  | |||||  |||||||||||||||  ||||||||| | |||||||||   || |  ||| | |||||||||  |||||    
T  3303647 aagagaaacaaacacaccaaagattgtttacccagttcggtccaact-tgacctactgtgggggagagattgatctcttcaatccactatcaatgagttc 3303745  T
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    || | ||||| ||||||| ||||||||||||||||| || ||||||||| | |||||||||| |||||| || |||||||    
T  3303746 tt-acaaagagatacaaatgagttacaagaaattaggttaaacaagctcacaaagaacaaacttaatttctacccatttt 3303824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 18106164 - 18106271
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-aatctctttccatgaacaagacactcaa 261  Q
    ||||||| |||||||||||||||||||||||||||||| | ||||||||   || ||| |||||||||||| ||||||   | |||||||||||||||||    
T  18106164 atacaaatgagttacaagaaattagcttcaacaagctcgcaaagaacaactatagtttctatccatttttccaatctcac-cgatgaacaagacactcaa 18106262  T
Q  262 tgattttca 270  Q
      |||||||    
T  18106263 caattttca 18106271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 18655508 - 18655405
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||||||||||||||||| | |||||||| | |||||| || ||||||| |||    
T  18655508 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccttaatttctacccattttctca 18655410  T
Q  235 atctc 239  Q
    |||||    
T  18655409 atctc 18655405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 40328888 - 40328793
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| |||||||| ||||||||||||||||| || ||||||||| | ||||||||||||||||| || |||||||    
T  40328888 cactatcaatgagttctt-acaaagagatacaaaatgagttacaagaaattagtttaaacaagctcacaaagaacaaacctaatttctacccatttt 40328793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 41364933 - 41365040
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | |||||||||||||||||| ||||| ||| | ||||||||||||||||| || | |||||  |||||||  | | ||||||||||||||||    
T  41364933 atacaaatgtgttacaagaaattagcttaaacaaactcacaaagaacaaacctaatttctaccaattttcccaatctcagt-cttgaacaagacactcaa 41365031  T
Q  262 tgattttca 270  Q
    |||||||||    
T  41365032 tgattttca 41365040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 44353910 - 44353807
Alignment:
Q  127 ttttcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc 226  Q
    |||||| | |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||| || ||    
T  44353910 ttttcaatccactatcaatgagttctt-acaaagagatacaaatgtgttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctaccc 44353812  T
Q  227 atttt 231  Q
    |||||    
T  44353811 atttt 44353807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 4283632 - 4283538
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||||||||||||||||| | || ||||| |||||||| || |||||||    
T  4283632 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaaaaacaaccctaatttctacccatttt 4283538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 5689379 - 5689246
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-a 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||  |||||||| | ||| || | | |||||| || ||||||||| |    
T  5689379 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagctcacaaagcaccaccttaatttctacccatttttcca 5689281  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    ||||| ||  ||||||||||||||||||||||||||    
T  5689280 atctcatta-atgaacaagacactcaatgattttca 5689246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 34256567 - 34256699
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-a 234  Q
    |||||||||  ||||||| | ||||| ||||||||| |||||||||||||| |||  ||||| || | |||||||| |||||||| || ||||||||| |    
T  34256567 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaaccctaatttcta-ccatttttcca 34256664  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  34256665 atctcac-caatgaacaagacactcaatgattttca 34256699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 40221853 - 40221759
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||| |||||||||||| | |||||||| |||||||| || |||||||    
T  40221853 cactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaccctaatttctacccatttt 40221759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 270
Target Start/End: Complemental strand, 40321173 - 40321055
Alignment:
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaac 250  Q
    |||| ||||| |||| || | |||||||||||||| ||||||||||||| | | |||||| |||||||| || |||||||  |||||||   | ||||||    
T  40321173 tttacaaagagatactaatgggttacaagaaattaacttcaacaagctcacaatgaacaaccctaatttctacccattttcccaatctc-acctatgaac 40321075  T
Q  251 aagacactcaatgattttca 270  Q
    ||||||||||||||||||||    
T  40321074 aagacactcaatgattttca 40321055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 31218345 - 31218231
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt---caatctctttccatgaacaag 253  Q
    ||||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || ||||||||   |||||||   | |||||||||    
T  31218345 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttcta-ccattttttcccaatctc-accaatgaacaag 31218248  T
Q  254 acactcaatgattttca 270  Q
    |||||||||||||||||    
T  31218247 acactcaatgattttca 31218231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 41366710 - 41366807
Alignment:
Q  173 gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 270  Q
    |||| ||||||||||||| ||||||||  | |||||||||| |||||| || ||||||| ||||||||  | | |||||||||||||||||||||||||    
T  41366710 gttaaaagaaattagcttaaacaagcttacaaagaacaaacataatttctacccattttctcaatctcagt-cttgaacaagacactcaatgattttca 41366807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 368
Target Start/End: Complemental strand, 44353733 - 44353639
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac 368  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  ||||| || || ||||||||| ||  ||||||| ||||| ||||||||    
T  44353733 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagaatcttttcttttggtttcacaagactcacccaagttgctcac 44353639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 7444914 - 7445011
Alignment:
Q  173 gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttca 270  Q
    ||||||| |||||  |||||||||||| |   |||||||| ||||||| || | |||| |||||||||| |||||||||||| |||||| ||||||||    
T  7444914 gttacaacaaatttacttcaacaagctatattagaacaaatctaatttctaccaatttctcaatctcttcccatgaacaagagactcaaagattttca 7445011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 40328720 - 40328623
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||||   || ||||||||||  |||| ||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  40328720 tagaatctaacccccaaaagagaaccaactcatagcctttgatttcactaaagatcttctcttttggtttcacaagactcacccaagttgctcacaaa 40328623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 1746298 - 1746412
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattttta--tccatttttcaatctctttccatgaacaaga 254  Q
    ||||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| ||  |   ||||||||||||   | ||||||||||    
T  1746298 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacctttttttttcaatctc-accaatgaacaaga 1746396  T
Q  255 cactcaatgattttca 270  Q
    ||||||||||||||||    
T  1746397 cactcaatgattttca 1746412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 6599054 - 6598986
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    ||||||| | |||||||||||||||||| ||||||||| | |||||||||| |||||| || |||||||    
T  6599054 atacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaacttaatttctacccatttt 6598986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 6674507 - 6674439
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    ||||||| | |||||||||||||||||| ||||||||| | |||||||||| |||||| || |||||||    
T  6674507 atacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaacttaatttctacccatttt 6674439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 17982741 - 17982627
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt--caatctctttccatgaacaaga 254  Q
    ||||| ||||||||| |||||||||||||| |||  ||||| || | |||||||| |||||||| || || |||||  |||||||   | ||||||||||    
T  17982741 aaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaaccctaatttctacccttttttcccaatctc-accaatgaacaaga 17982643  T
Q  255 cactcaatgattttca 270  Q
    ||||||||||||||||    
T  17982642 cactcaatgattttca 17982627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 30909445 - 30909393
Alignment:
Q  168 aaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||||||||||||| || ||||||||||||||||  |||||||||||    
T  30909445 aaagagttacaagaaattagtttaaacaagctctccaagagtaaacctaattt 30909393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 12702722 - 12702777
Alignment:
Q  165 acaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||||| ||||||||||||||||||||||||| || | |||||||| ||||||||    
T  12702722 acaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaattt 12702777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 29796409 - 29796460
Alignment:
Q  164 tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacct 215  Q
    |||||||  |||||||||||| |||||||||||| |||||||||||||||||    
T  29796409 tacaaaaatgttacaagaaatcagcttcaacaagttctccaagaacaaacct 29796460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 10240263 - 10240185
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc 214  Q
    |||||||||  ||||||||| ||||| || ||| |  ||||||||||||||| |||||||||||| | |||||||||||    
T  10240263 cactatcaatgagttctttacaaagagatccaacatggttacaagaaattagattcaacaagctcacaaagaacaaacc 10240185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 10930295 - 10930353
Alignment:
Q  173 gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||||||||||||||| ||||| | |||| ||| |||||||| ||||||||||    
T  10930295 gttacaagaaattagcttcaacgagctcacaaagagcaaccctaatttctatccatttt 10930353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 10015169 - 10015128
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagc 198  Q
    ||||| ||||||| ||||||||||||||||||||||||||||    
T  10015169 aaagagatacaaatgagttacaagaaattagcttcaacaagc 10015128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 152 - 264
Target Start/End: Complemental strand, 11137118 - 11137007
Alignment:
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaac 250  Q
    |||| ||||| ||||||||  |||| |||||||||||||||||||| ||| |||| ||| || |||||| || ||||||| |||||||| |||||||||     
T  11137118 tttacaaagagatacaaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttcta-ccattttctcaatctc-ttccatgaaa 11137021  T
Q  251 aagacactcaatga 264  Q
    || | |||||||||    
T  11137020 aatagactcaatga 11137007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 9765853 - 9765759
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||   ||||||| | |||||||| |||||||| || |||||||    
T  9765853 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgccaagctcacaaagaacaaccctaatttctacccatttt 9765759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 376
Target Start/End: Original strand, 10101402 - 10101480
Alignment:
Q  298 accaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactc 376  Q
    ||||||| |||  |||||||||  ||||||| | |||||||| |||||||||| ||  |||| ||||||||||||||||    
T  10101402 accaacccttagactttgatttaataaggatctcctcttttgatctcctaagattcatccaagttgctcacaaagactc 10101480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 268
Target Start/End: Complemental strand, 38863936 - 38863847
Alignment:
Q  180 gaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccatttttc-aatctctttccatgaacaagacactcaatgatttt 268  Q
    |||||||| |||||||| |||||| | |||||| |||||||| || ||||||  | |||||||||||| |||||||| |||||||||||||    
T  38863936 gaaattagtttcaacaaactctcccaaaacaaaacctaatttcta-ccatttccctaatctctttccaagaacaagagactcaatgatttt 38863847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 1345431 - 1345514
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||  ||||||||  ||||| ||||| | | ||||||||||||||||||||| || ||| | |||||||| ||||||||    
T  1345431 cactatcaatgagttctttc-aaagagatacatatgggttacaagaaattagcttcaataaactcacaaagaacaaccctaattt 1345514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 370
Target Start/End: Complemental strand, 18655341 - 18655246
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaa 370  Q
    |||||||||| ||||||||||| | ||||| ||| ||||||||||  |||||||| |||||||||| | ||  ||||||| || || ||||||||||    
T  18655341 tagaatctaa-ccccaaaagagtatcaacccttagcctttgatttcactaaggatcttctcttttgatttcacaagactcaccgaagttgctcacaa 18655246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 2e-56; HSPs: 99)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 269 - 403
Target Start/End: Original strand, 22882974 - 22883109
Alignment:
Q  269 caattttagaatctaatcccc-aaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctca 367  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22882974 caattctagaatctaaccccccaaaagagaaccaaccattatcctttgattttctaaggatcttctcttttggtctcctaagactcgcccaaattgctca 22883073  T
Q  368 caaagactctcatttgatgtgtttccaaaccctatg 403  Q
    |||||||||||||||||||||||||| |||||||||    
T  22883074 caaagactctcatttgatgtgtttcctaaccctatg 22883109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 269 - 403
Target Start/End: Original strand, 22934638 - 22934773
Alignment:
Q  269 caattttagaatctaatcccc-aaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctca 367  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22934638 caattctagaatctaaccccccaaaagagaaccaaccattatcctttgattttctaaggatcttctcttttggtctcctaagactcgcccaaattgctca 22934737  T
Q  368 caaagactctcatttgatgtgtttccaaaccctatg 403  Q
    |||||||||||||||||||||||||| |||||||||    
T  22934738 caaagactctcatttgatgtgtttcctaaccctatg 22934773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 70 - 270
Target Start/End: Original strand, 22882744 - 22882944
Alignment:
Q  70 ccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagagaggcattttcacttcactatcaagaagttctttagaaagaaatacaaa 169  Q
    |||| |||||||| ||||||||||||||||||||||||||||  |||||||  |   | |  | | ||||| |||  |||||||||  |||| |||||||    
T  22882744 ccaagaaatgtttatccagttcggtccaacaatgacctactccgggggagattgatttctctaatccactaccaatgagttctttacgaagagatacaaa 22882843  T
Q  170 agagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttc 269  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22882844 agggttacaagaaattagcttcaacaaactctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaaggcactcaatgattttc 22882943  T
Q  270 a 270  Q
    |    
T  22882944 a 22882944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 70 - 270
Target Start/End: Original strand, 22934408 - 22934608
Alignment:
Q  70 ccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagagaggcattttcacttcactatcaagaagttctttagaaagaaatacaaa 169  Q
    |||| |||||||| ||||||||||||||||||||||||||||  |||||||  |   | |  | | ||||| |||  |||||||||  |||| |||||||    
T  22934408 ccaagaaatgtttatccagttcggtccaacaatgacctactccgggggagattgatttctctaatccactaccaatgagttctttacgaagagatacaaa 22934507  T
Q  170 agagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttc 269  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22934508 agggttacaagaaattagcttcaacaaactctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaaggcactcaatgattttc 22934607  T
Q  270 a 270  Q
    |    
T  22934608 a 22934608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 272
Target Start/End: Complemental strand, 5350100 - 5349879
Alignment:
Q  54 aagataaacaaacactccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagagaggcattttcacttcactatcaagaagttctt 153  Q
    |||| |||||||||| |||||||||||||  ||| ||| |||||||||||||||||||| ||||||||||   | | | ||||| ||||||  |||||||    
T  5350100 aagagaaacaaacacaccaataaatgtttacccaattcagtccaacaatgacctactct-ggggagagagatctctccgcttcattatcaacgagttctt 5350002  T
Q  154 tagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttc----catgaa 249  Q
    || ||||| ||||||| ||| |||||| |||||||||| ||||| || | ||||||||||||||||| || |||||||| ||||||||||    | ||||    
T  5350001 tacaaagagatacaaacgagctacaaggaattagcttcgacaagttcacaaagaacaaacctaatttctacccattttttaatctctttccgtacgtgaa 5349902  T
Q  250 caagacactcaatgattttcaat 272  Q
    |||||||||||| ||||||||||    
T  5349901 caagacactcaaagattttcaat 5349879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 85 - 267
Target Start/End: Original strand, 38811198 - 38811379
Alignment:
Q  85 ccagttcggtccaacaatgacctactcttggggagagaggcattttcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaat 184  Q
    |||||||||||||||||||||||||||||||||||||||   | | | ||||||||||||  |||  |||| |||||| |||||||  || || ||||||    
T  38811198 ccagttcggtccaacaatgacctactcttggggagagagatctctccgcttcactatcaatgagtcatttacaaagaa-tacaaaatggtcactagaaat 38811296  T
Q  185 tagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattt 267  Q
    ||  |||||||| |||||||||||||||| |||||| || |||||| |||||||||||| |||||||||| ||||||||||||    
T  38811297 taaattcaacaaactctccaagaacaaacttaatttgtacccatttctcaatctctttctatgaacaagagactcaatgattt 38811379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 33089987 - 33089853
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 235  Q
    |||||||||  ||||||||| | ||| ||||||||  |||| || ||||||||||||||||||||||||||||||||| |||||| ||| ||| | ||||    
T  33089987 cactatcaatgagttctttacagagagatacaaaatggttataataaattagcttcaacaagctctccaagaacaaacataatttctattcatctctcaa 33089888  T
Q  236 tctctttccatgaacaagacactcaatgattttca 270  Q
    |||||| ||||||||||||||||||||||||||||    
T  33089887 tctcttcccatgaacaagacactcaatgattttca 33089853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 3786019 - 3785915
Alignment:
Q  286 ccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgat 385  Q
    ||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||| |||||     
T  3786019 ccccaaaagagaaccaactcttagcctttgatttcctaaggatattctcttttggtctcccaagactcgcacaatttgctcacaaagactctcctttgaa 3785920  T
Q  386 gtgtt 390  Q
    |||||    
T  3785919 gtgtt 3785915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 34112973 - 34112842
Alignment:
Q  89 ttcggtccaacaatgacctactcttggggagagaggcattttcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagc 188  Q
    |||||||||||||||||||||| | ||||||||||   | | ||||||||||||||  ||||||||| ||||| || |||||| |||||| |||||||||    
T  34112973 ttcggtccaacaatgacctactataggggagagagatctctccacttcactatcaatgagttctttacaaagagatgcaaaagggttacatgaaattagc 34112874  T
Q  189 ttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||||||||||||| ||||||||| ||||||    
T  34112873 ttcaacaagctctcctagaacaaacataattt 34112842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 157 - 399
Target Start/End: Complemental strand, 26364324 - 26364080
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagac 255  Q
    ||||| ||||||| ||||||||||||||||||||||||||| || | |||||||| |||||||| || |||||||  |||||||   | |||||||||||    
T  26364324 aaagagatacaaatgagttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctc-accaatgaacaagac 26364226  T
Q  256 actcaatgattttcaattttagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcg 354  Q
    ||| | || ||  ||| | || ||||||| | ||||||||||||||||| ||| | ||||||||  |||||||| |||||||||||| ||  |||||||     
T  26364225 actaattgtttcccaactctaaaatctaaccaccaaaagagaaccaacccttagcatttgatttcactaaggatcttctcttttggtttcacaagactca 26364126  T
Q  355 cccaaattgctcacaaa-gactctcatttgatgtgtttccaaaccc 399  Q
    ||||| ||||||||||| |||||||   | |||||||||| |||||    
T  26364125 cccaagttgctcacaaatgactctccactcatgtgtttcccaaccc 26364080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 148 - 267
Target Start/End: Complemental strand, 32091575 - 32091456
Alignment:
Q  148 gttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatg 247  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| || |  |||  ||||||  | |||||    
T  32091575 gttctttacaaagagatacaaaagagttacaagaaattagtttcaacaaactctccaagaacaaacctaatttctagcattttcccaatcttctcccatg 32091476  T
Q  248 aacaagacactcaatgattt 267  Q
    ||||||| ||||||||||||    
T  32091475 aacaagagactcaatgattt 32091456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 138 - 270
Target Start/End: Original strand, 44570427 - 44570564
Alignment:
Q  138 ctatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatc 237  Q
    |||||||  ||||||||| ||||| ||||||||  ||||||||||||||| ||||||||||||||||| ||||||| |||||| || |||||||||||||    
T  44570427 ctatcaatgagttctttacaaagagatacaaaaatgttacaagaaattagtttcaacaagctctccaacaacaaacataatttcta-ccatttttcaatc 44570525  T
Q  238 tctttc------catgaacaagacactcaatgattttca 270  Q
    |||| |      |||||||||||||||||||||||||||    
T  44570526 tcttcccatgaacatgaacaagacactcaatgattttca 44570564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 149 - 267
Target Start/End: Complemental strand, 6677565 - 6677446
Alignment:
Q  149 ttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaag--aacaaacctaatttttatccatttttcaatctctttccat 246  Q
    ||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||  || ||||||||||| || ||||||| |||| |||| |||     
T  6677565 ttctttacaaagatatacaaaagggttacaagaaattagcttcaacaagctctccaagaaaaaaaacctaatttcta-ccattttccaatttcttcccaa 6677467  T
Q  247 gaacaagacactcaatgattt 267  Q
    |||||||| ||||||| ||||    
T  6677466 gaacaagagactcaattattt 6677446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 379556 - 379385
Alignment:
Q  70 ccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagagaggcatttt--cacttcactatcaagaagttctttagaaagaaataca 167  Q
    |||| |||||||  ||||||||||||||||||||||||||||| | |||||||   || |   || | |||||||||  ||||||| | ||||  |||||    
T  379556 ccaagaaatgttcatccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactatcaattagttctt-acaaagcgataca 379458  T
Q  168 aaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctc 239  Q
    || | |||||||||||||||||||||||||||| | ||||||||||||||||| || ||||||| ||||||||    
T  379457 aatgggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctacccattttctcaatctc 379385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 275 - 399
Target Start/End: Complemental strand, 41961351 - 41961222
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaa-----attgctcaca 369  Q
    |||||||||| || |||||||||||||||| ||| | |||||||| ||||||||||||| ||||||||||| ||||||| |||||      |||||||||    
T  41961351 tagaatctaaccctcaaaagagaaccaacccttagcttttgatttcctaaggatattcttttttggtctcccaagactcacccaagttacgttgctcaca 41961252  T
Q  370 aagactctcatttgatgtgtttccaaaccc 399  Q
     |||||||| ||| |||||||||| |||||    
T  41961251 tagactctcctttaatgtgtttcccaaccc 41961222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 270
Target Start/End: Original strand, 47038507 - 47038602
Alignment:
Q  174 ttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttca 270  Q
    ||||||||||||||||||||||||||| | |||||||| |||||||| || ||||||| |||||||   | ||||||||||||||||||||||||||    
T  47038507 ttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttccaatctc-accaatgaacaagacactcaatgattttca 47038602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 24969220 - 24969087
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt-ca 234  Q
    |||||||||  ||||||| | ||||| ||||||| |||||||||||||||||||||||||||||| | ||||||||| ||||||| || |||||||| ||    
T  24969220 cactatcaattagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaatctaatttctacccatttttcca 24969122  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | | ||||||||| ||||||||||||||    
T  24969121 atctc-accaaagaacaagactctcaatgattttca 24969087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 26699513 - 26699580
Alignment:
Q  147 agttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc 214  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  26699513 agttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagaacaaacc 26699580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 34788847 - 34788918
Alignment:
Q  149 ttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||    
T  34788847 ttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctctccaagagcaatcctaattt 34788918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 92 - 270
Target Start/End: Original strand, 35369461 - 35369634
Alignment:
Q  92 ggtccaacaatgacctactcttggggagagaggcattttcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttc 191  Q
    ||||||||||||||||||| | || ||||  | | | |||| ||||| |||||  ||||||||| ||||| |||     |||||  |||||||||| |||    
T  35369461 ggtccaacaatgacctactatgggagagatcgacctcttcaattcaccatcaatgagttctttacaaagagata-----gagttttaagaaattagtttc 35369555  T
Q  192 aacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttca 270  Q
    | ||||||| ||||||||||||||||||| ||  |||||  |||| |||| | ||||||||||||||||||||||||||    
T  35369556 atcaagctcaccaagaacaaacctaatttctactcatttcccaatgtcttgcaatgaacaagacactcaatgattttca 35369634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 50674073 - 50674199
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 372  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||| ||||    
T  50674073 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaag 50674172  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  50674173 actctccactcatgtgtttcccaaccc 50674199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 12073333 - 12073236
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||||| ||| | ||||||||  |||||||| |||||||||||| || |||||||| ||||| |||||||||||    
T  12073333 tagaatctaacccccaaaagagaaccaacccttagcatttgatttcactaaggatcttctcttttggtttcataagactcacccaagttgctcacaaa 12073236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 134 - 270
Target Start/End: Original strand, 54199964 - 54200099
Alignment:
Q  134 ttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-t 232  Q
    |||||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||| || |||||||      
T  54199964 ttcactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttcc 54200062  T
Q  233 caatctctttccatgaacaagacactcaatgattttca 270  Q
    |||||||   | ||||||||||||||||||||||||||    
T  54200063 caatctc-accaatgaacaagacactcaatgattttca 54200099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 379319 - 379223
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| || |||||||||||||||| ||| |||||||||| |||||||| |||||||||| | ||  ||||||| ||||| |||||||||||    
T  379319 tagaatctaacccacaaaagagaaccaacccttagcctttgatttcctaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaa 379223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 8665516 - 8665422
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||| || |||||||    
T  8665516 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctctcaaagaacaaccctaatttctacccatttt 8665422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 12073500 - 12073406
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| ||||||||| |||||||||||||||||||| | ||||||||||||||||| || |||||||    
T  12073500 cactatcaatgagttctt-acaaagagatacaaatgagttacaataaattagcttcaacaagctcacaaagaacaaacctaatttctacccatttt 12073406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 31474239 - 31474125
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaa-acctaatttttatccatttt-tcaatctctttccatgaacaaga 254  Q
    ||||| ||||||| |||||||||||||||||||||||||| |||   |||||||| ||||||||| || ||||||| ||||||||   | ||||||||||    
T  31474239 aaagagatacaaatgagttacaagaaattagcttcaacaaactcaaaaagaacaagacctaatttctacccattttctcaatctc-accaatgaacaaga 31474141  T
Q  255 cactcaatgattttca 270  Q
    ||||||||||||||||    
T  31474140 cactcaatgattttca 31474125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 278 - 345
Target Start/End: Complemental strand, 33089825 - 33089758
Alignment:
Q  278 aatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcc 345  Q
    ||||||| | ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||    
T  33089825 aatctaacctccaaaagagaaccaacctttagcctttgattttctaaggatcttctcttttggtctcc 33089758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 288 - 387
Target Start/End: Original strand, 35370578 - 35370677
Alignment:
Q  288 ccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgt 387  Q
    ||||||||||||||||||||| |||||||||| | || ||| |||| ||||||| |||  |||||| ||||| ||||| |||||||||||| ||||||||    
T  35370578 ccaaaagagaaccaaccattagcctttgatttcccaaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatgt 35370677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 56178697 - 56178830
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||||| ||||||||||||||||||||||||| || | |||||||| |||||||| || || ||||  ||    
T  56178697 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctaccctttttccca 56178795  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  56178796 atctc-accaatgaacaagacactcaatgattttca 56178830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 270
Target Start/End: Complemental strand, 5871892 - 5871795
Alignment:
Q  173 gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 270  Q
    ||||||||||||| |||| ||||||||| | ||||||||||||||||| || ||||||||| ||||||   | ||||||||||||||||||||||||||    
T  5871892 gttacaagaaatttgcttaaacaagctcacaaagaacaaacctaatttctacccatttttccaatctcac-caatgaacaagacactcaatgattttca 5871795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 270
Target Start/End: Complemental strand, 12119698 - 12119513
Alignment:
Q  87 agttcggtccaacaatgacctactcttggg-gagagaggcattttcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaatt 185  Q
    |||||||||||||||||||||||||||||| ||||  |   | | || | |||||| ||  ||||||||| ||||| ||||||||| |||||||||||||    
T  12119698 agttcggtccaacaatgacctactcttgggagagattgatctctccaatccactataaatgagttctttacaaagagatacaaaagggttacaagaaatt 12119599  T
Q  186 agcttcaacaagctctccaagaacaaacc-taattttta-tccatttttcaatctctttccatgaacaagacactcaatgattttca 270  Q
    |||||||| ||| || | ||||||||||| |||||| || ||  |||| |||||||   | |||||||||||||||| |||||||||    
T  12119598 agcttcaaaaagttcacaaagaacaaaccataatttctactcttttttccaatctc-acctatgaacaagacactcattgattttca 12119513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 373
Target Start/End: Complemental strand, 35662381 - 35662284
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaaga 373  Q
    ||||||||||  |||||||||||||||||| ||| | |||||||| |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||||    
T  35662381 tagaatctaacacccaaaagagaaccaacccttagc-tttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaga 35662284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 399
Target Start/End: Complemental strand, 41964355 - 41964230
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 372  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||| ||||    
T  41964355 tagaatctaa-ccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaag 41964257  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  41964256 actctctactcatgtgtttcccaaccc 41964230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 48893698 - 48893835
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaa----gaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| |||||||||||||||||||||||||||||| | ||    |||||| |||||||| || |||||||    
T  48893698 cactatcaaagagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaacaatgaacaaccctaatttctacccatttt 48893796  T
Q  232 -tcaatctctttccatgaacaagacactcaatgattttca 270  Q
     ||||||||   | ||||||||||||||||||||||||||    
T  48893797 ctcaatctc-accaatgaacaagacactcaatgattttca 48893835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 46147451 - 46147547
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc 233  Q
    |||||||||  ||||||| | ||||| ||||||| |||||||||||||||||||||||||||||| | | |||||| |||||||| || |||||||||    
T  46147451 cactatcaaagagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaatgaacaaccctaatttctacccatttttc 46147547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 46703437 - 46703344
Alignment:
Q  278 aatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    ||||||| ||||||||||||||||||  ||| |||||||||| |||||||| |||||||||||| ||  ||||||| ||||| ||||| |||||    
T  46703437 aatctaacccccaaaagagaaccaacttttagcctttgatttcctaaggattttctcttttggtttcacaagactcacccaagttgctgacaaa 46703344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 270
Target Start/End: Original strand, 35370449 - 35370541
Alignment:
Q  178 aagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttca 270  Q
    |||||||||| |||| ||||||| ||||||||||||||||||| ||  |||||  |||| |||| | |||||||||||||||||| |||||||    
T  35370449 aagaaattagtttcatcaagctcaccaagaacaaacctaatttctactcatttcccaatgtcttgcaatgaacaagacactcaataattttca 35370541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 36994606 - 36994499
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | |||||||||||||||||||||||||||| | |||||||| | |||||| || |||||||  |||||||   | |||||||||||||||||    
T  36994606 atacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccttaatttctacccattttcccaatctc-accaatgaacaagacactcaa 36994508  T
Q  262 tgattttca 270  Q
    |||||||||    
T  36994507 tgattttca 36994499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 26175696 - 26175829
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||| |||||||||||| | |||||||| |||||||| |  |||||||  ||    
T  26175696 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaccctaatttctccccattttccca 26175794  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  26175795 atctc-accaatgaacaagacactcaatgattttca 26175829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 48143130 - 48143017
Alignment:
Q  158 aagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt--caatctctttccatgaacaagac 255  Q
    |||| ||||||||| ||||||||||||||||||||||||| || | |||||||| |||||||| || |  |||||  |||||||   | |||||||||||    
T  48143130 aagagatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacctttttttcccaatctc-accaatgaacaagac 48143032  T
Q  256 actcaatgattttca 270  Q
    |||||||||||||||    
T  48143031 actcaatgattttca 48143017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 36463469 - 36463582
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagac 255  Q
    ||||| ||||||| | |||||||||||||||||||||||||||| | | |||||  |||||||| ||||||||||  |||||||   | |||||||||||    
T  36463469 aaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaacagccctaatttctatccattttcccaatctc-accaatgaacaagac 36463567  T
Q  256 actcaatgattttca 270  Q
    ||||||||| |||||    
T  36463568 actcaatgaatttca 36463582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 267
Target Start/End: Complemental strand, 41961513 - 41961395
Alignment:
Q  149 ttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatga 248  Q
    ||||||| ||||| ||||||||   |||||||||||||||   | ||||||||||| |||||||| |||||| ||  | |||| |||||||||  |||||    
T  41961513 ttctttacaaagagatacaaaatgattacaagaaattagcactaccaagctctccatgaacaaacttaatttctactctttttccaatctcttctcatga 41961414  T
Q  249 acaagacactcaatgattt 267  Q
    |||||| ||||||||||||    
T  41961413 acaagagactcaatgattt 41961395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 33989942 - 33989873
Alignment:
Q  147 agttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaaccta 216  Q
    |||| |||| ||||| |||||||||  ||||||||||||||||||||||| ||||| |||||||||||||    
T  33989942 agttatttacaaagagatacaaaaggattacaagaaattagcttcaacaaactctctaagaacaaaccta 33989873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 260
Target Start/End: Complemental strand, 35662549 - 35662426
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcca-tttttca 234  Q
    |||||||||  ||||||| | ||||| ||||||| |||||||||||||||||||||||||| |||   |||||||| |||||||| || ||| |||||||    
T  35662549 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaaactcataaagaacaaccctaatttctacccattttttca 35662451  T
Q  235 atctctttccatgaacaagacactca 260  Q
    |||||   | ||||||||||||||||    
T  35662450 atctc-accaatgaacaagacactca 35662426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 50262708 - 50262855
Alignment:
Q  85 ccagttcggtccaacaatgacctactcttggggagaga--ggcattttcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaa 182  Q
    |||||||||||||||||||||||||||| | ||| |||  |  || | || |  ||||||||  ||||||| | ||||| ||||||| | ||||||||||    
T  50262708 ccagttcggtccaacaatgacctactctggaggaaagattgatatctccaatcaactatcaatgagttctt-acaaagagatacaaatgggttacaagaa 50262806  T
Q  183 attagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||||||||||| | |||||||| | ||||||  |||||||||    
T  50262807 attagcttcaacaagctcacaaagaacaaccgtaatttcgatccatttt 50262855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 54882961 - 54882864
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||   |||||| ||||| || ||||||||    
T  54882961 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacgagactcacccaagtttctcacaaa 54882864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 55085445 - 55085557
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagaca 256  Q
    ||||| ||||||| |  ||||||||||||||||||||||||||| | |||||||| | |||||| || | ||||| |||||||   | ||||||||||||    
T  55085445 aaagagatacaaatggtttacaagaaattagcttcaacaagctcacaaagaacaaccttaatttctacctattttccaatctc-accaatgaacaagaca 55085543  T
Q  257 ctcaatgattttca 270  Q
     |||||||||||||    
T  55085544 gtcaatgattttca 55085557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 5429761 - 5429654
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | |||||||||||||||||||||||||||| | ||||| || |||||||| ||  ||||||  |||||||   | |||||||||||||||||    
T  5429761 atacaaatgggttacaagaaattagcttcaacaagctcacgaagaataaccctaatttctactcattttcccaatctc-accaatgaacaagacactcaa 5429663  T
Q  262 tgattttca 270  Q
    |||||||||    
T  5429662 tgattttca 5429654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 6656064 - 6655969
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt 232  Q
    |||||||||  ||||||| | ||||| ||||||| ||||||||||||||||||||||||||| || | |||||||| | |||||| || ||||||||    
T  6656064 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagttcacaaagaacaaccttaatttctacccattttt 6655969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 27417040 - 27417108
Alignment:
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||| ||||| ||||||| | |||||||||||||||||||||||||||| | |||||||| ||||||||    
T  27417040 tttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaattt 27417108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 33989802 - 33989706
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| | |||||||||||| || | ||| |||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  33989802 tagaatctaacctccaaaagagaacaaatccttagcctttgattacctaaggatcttctcttttggtttcaaaagactcacccaagttgctcacaaa 33989706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 52467440 - 52467508
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    ||||||| | ||||||||| |||||||||||||||||| | ||||||||||||||||| || |||||||    
T  52467440 atacaaatgggttacaagatattagcttcaacaagctcacaaagaacaaacctaatttctacccatttt 52467508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 270
Target Start/End: Complemental strand, 53345315 - 53345192
Alignment:
Q  147 agttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaa-caaacctaatttttatccatttttcaatctctttcca 245  Q
    ||||||||| ||| | ||| ||||| ||||||||||||||| |||||||||||| | ||||| ||| | |||||| ||||  ||| |||||||| | | |    
T  53345315 agttctttacaaaaagatataaaagggttacaagaaattagtttcaacaagctcacaaagaatcaaccttaatttctatcattttctcaatctc-tccga 53345217  T
Q  246 tgaacaagacactcaatgattttca 270  Q
    | |||||||||||||||||||||||    
T  53345216 taaacaagacactcaatgattttca 53345192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 9927518 - 9927612
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||| || |||||||    
T  9927518 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccatttt 9927612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 21688336 - 21688261
Alignment:
Q  158 aagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc 233  Q
    |||| ||||||| ||||||||| ||||||| |||||||||||| | |||||||| |||||||| || |||||||||    
T  21688336 aagagatacaaatgagttacaaaaaattagtttcaacaagctcacaaagaacaaccctaatttctacccatttttc 21688261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 34570474 - 34570607
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||  | ||||||||||||||||||||||||| || | |||||||| |||||||| || | |||||  ||    
T  34570474 cactatcaatgagttctt-acaaagagatacaattgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacctattttccca 34570572  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  34570573 atctc-accaatgaacaagacactcaatgattttca 34570607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 37740733 - 37740600
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-a 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||| || || |||| | |    
T  37740733 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttataccctttttccaa 37740635  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | |||||||||||||||| |||||||||    
T  37740634 atctc-accaatgaacaagacactcagtgattttca 37740600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 50262925 - 50262992
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggt 341  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||  |||||| | ||||||||||||    
T  50262925 tagaatctaacccccaaaagagaaccaaccattagcctttgatttcactaagggtcttctcttttggt 50262992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 54883128 - 54883034
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||||||||||||||||| | || ||||| |||||||| || |||||||    
T  54883128 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaaaaacaaccctaatttctacccatttt 54883034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 85 - 231
Target Start/End: Complemental strand, 2209875 - 2209727
Alignment:
Q  85 ccagttcggtccaacaatgacctactcttggggagagaggcatttt--cacttcactatcaagaagttctttagaaagaaatacaaaa-gagttacaaga 181  Q
    ||||||||||||||| |||||||||||| | |||||||   || |   || | |||||||||  ||||||| | ||||| |||||||| | |||||||||    
T  2209875 ccagttcggtccaaccatgacctactctggaggagagattaatctctccaatccactatcaatgagttctt-acaaagagatacaaaatgggttacaaga 2209777  T
Q  182 aattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    ||||||||||||||||||| | ||||| || |||||||| || |||||||    
T  2209776 aattagcttcaacaagctcacaaagaaaaaccctaatttctacccatttt 2209727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 399
Target Start/End: Complemental strand, 6655897 - 6655771
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 372  Q
    |||||||||| ||| ||||||||| ||||| ||| ||||||||||| |||| ||| |||||||||||| ||  ||||||| ||||| ||||||| ||| |    
T  6655897 tagaatctaaccccaaaaagagaaacaacctttagcctttgattttactaatgatcttctcttttggtttcacaagactcacccaagttgctcagaaatg 6655798  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  6655797 actctccactcatgtgtttcccaaccc 6655771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 52095442 - 52095555
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagac 255  Q
    ||||| ||||||| | ||||||||||||||||||  ||||| || | |||||||| |||||||| || |||||||  |||||||   | |||||||||||    
T  52095442 aaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccattttcccaatctc-accaatgaacaagac 52095540  T
Q  256 actcaatgattttca 270  Q
    |||||||||||||||    
T  52095541 actcaatgattttca 52095555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 55085592 - 55085718
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 372  Q
    |||||||||| ||||||| ||||| ||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| | ||| ||||||||||| |    
T  55085592 tagaatctaacccccaaaggagaatcaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacacaagttgctcacaaatg 55085691  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  55085692 actctccactcatgtgtttcccaaccc 55085718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 355
Target Start/End: Complemental strand, 2209654 - 2209573
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgc 355  Q
    |||||||||| |||||||||||||||||||  || ||||||||||  |||||||| |||||||||||| ||  |||||||||    
T  2209654 tagaatctaacccccaaaagagaaccaacccatagcctttgatttcactaaggatcttctcttttggtttcacaagactcgc 2209573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 6542156 - 6542374
Alignment:
Q  54 aagataaacaaacactccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagagaggcatttt--cacttcactatcaagaagttc 151  Q
    |||| |||||||||| |||| ||||||||  |||||||||||||||  |||||||| || |||||||||   || |   || | |||||||||  |||||    
T  6542156 aagagaaacaaacacaccaagaaatgtttacccagttcggtccaact-tgacctaccctgggggagagattgatctctccaatccactatcaacgagttc 6542254  T
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccattttt---caatctctttccatg 247  Q
    || | ||||| |||||||||  | |||||||||||| |||||||||||| | ||||||||| |||||||| || ||||||||   |||||||   | |||    
T  6542255 tt-acaaagagatacaaaaggctaacaagaaattagtttcaacaagctcacaaagaacaaatcctaatttcta-ccattttttcccaatctc-cccaatg 6542351  T
Q  248 aacaagacactcaatgattttca 270  Q
    ||||||||||||||| |||||||    
T  6542352 aacaagacactcaataattttca 6542374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 12119475 - 12119383
Alignment:
Q  278 aatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    ||||||| ||||||||||||||||||| ||| | || |||||  ||||||| |||||||||||| ||  ||||| | |||||||||||||||||    
T  12119475 aatctaacccccaaaagagaaccaacccttaac-ttcgatttcttaaggatcttctcttttggtttcacaagacacacccaaattgctcacaaa 12119383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 267
Target Start/End: Original strand, 12739636 - 12739740
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | ||||||||||||||||||  ||||| || | |||||||| |||||||| ||||||||||  |||||||   | |||||||||||||||||    
T  12739636 atacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctatccattttcccaatctc-accaatgaacaagacactcaa 12739734  T
Q  262 tgattt 267  Q
    ||||||    
T  12739735 tgattt 12739740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 267
Target Start/End: Original strand, 12747842 - 12747946
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | ||||||||||||||||||  ||||| || | |||||||| |||||||| ||||||||||  |||||||   | |||||||||||||||||    
T  12747842 atacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctatccattttcccaatctc-accaatgaacaagacactcaa 12747940  T
Q  262 tgattt 267  Q
    ||||||    
T  12747941 tgattt 12747946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 16422661 - 16422750
Alignment:
Q  131 cacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||||| |  ||||| ||| ||||| ||||||||| ||| | ||||||||||||||| |||||||| || ||||||| ||||||    
T  16422661 cacttcactatccatgagttcattacaaagatatacaaaagggtttctagaaattagcttcaaaaagctctcaaaaaacaaacataattt 16422750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 267
Target Start/End: Original strand, 21703812 - 21704027
Alignment:
Q  54 aagataaacaaacactccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagaga--ggcattttcacttcactatcaagaagttc 151  Q
    |||| ||||||||||  ||| ||||||||  ||||||||||| |||||||||||||| | ||||| |||  |  || | || | |||| ||||  |||||    
T  21703812 aagagaaacaaacacatcaagaaatgtttacccagttcggtcaaacaatgacctactat-ggggatagattgatatctccaatccactgtcaatgagttc 21703910  T
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatccatttttcaatctctttccatgaac 250  Q
    |||| ||| | ||||||||  | |||||||||| | |||||||||||| || |||||| ||||||||||| || |  ||| |||||||||| ||| ||||    
T  21703911 tttacaaaaagatacaaaaagggtacaagaaatcatcttcaacaagctttctaagaacaaaacctaatttctacctttttctcaatctcttcccaagaac 21704010  T
Q  251 aagacactcaatgattt 267  Q
    || | ||| ||||||||    
T  21704011 aatagacttaatgattt 21704027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 4588067 - 4587992
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa 212  Q
    |||||||||  ||||||| | ||||| ||||||||| |||||||||||||||||||||||||||  | |||||||||    
T  4588067 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagcttcaacaagcttacaaagaacaaa 4587992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 392
Target Start/End: Original strand, 6200085 - 6200209
Alignment:
Q  269 caattttagaatctaatccccaaaagagaac-caaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctca 367  Q
    ||||| ||||||||||| ||||||| | ||  ||||| ||||| ||||| ||| ||||||| |||||||||||| ||  |||| ||  ||||||||||||    
T  6200085 caattctagaatctaatgcccaaaaaaaaaatcaacccttatcatttgactttataaggatcttctcttttggtatctcaagattcatccaaattgctca 6200184  T
Q  368 caaagactctcatttgatgtgtttc 392  Q
     || ||||||||| | |||||||||    
T  6200185 taaggactctcatctcatgtgtttc 6200209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 371
Target Start/End: Complemental strand, 8665347 - 8665251
Alignment:
Q  276 agaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    ||||||||| |||||||||| |||||||   || ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  8665347 agaatctaacccccaaaagaaaaccaacacataacctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 8665251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 398
Target Start/End: Original strand, 35369679 - 35369790
Alignment:
Q  286 ccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgat 385  Q
    ||||||||||||||||||| ||| |||||||||  | ||| || |||| ||||| | |||  |||||| ||||| ||||| ||||||||| || ||||||    
T  35369679 ccccaaaagagaaccaacccttagcctttgattcccaaag-atcttctattttgctatccatagactcacccaagttgcttacaaagactatcttttgat 35369777  T
Q  386 gtgtttccaaacc 398  Q
    ||||||| |||||    
T  35369778 gtgtttctaaacc 35369790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 48142448 - 48142571
Alignment:
Q  147 agttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccatttttcaatctctttcca 245  Q
    ||||||||| ||||| ||| | ||| ||||||||||| |||||||||||||||| | ||||||||| |||||||| ||||   ||  |||||||  || |    
T  48142448 agttctttacaaagagatatacaagggttacaagaaactagcttcaacaagctcacaaagaacaaaccctaatttctatcatgttcccaatctc-atcaa 48142546  T
Q  246 tgaacaagacactcaatgattttca 270  Q
    ||  |||||||||||||||||||||    
T  48142547 tgggcaagacactcaatgattttca 48142571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 50673907 - 50673970
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctc 200  Q
    |||||||||  ||||||| | ||||| ||||||| ||||||||||||||||||||||||||||||    
T  50673907 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctc 50673970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 29999893 - 29999999
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaat 262  Q
    ||||||||||||||||||||||||||||  ||| | || | |||||||| |||||||| || || |||  |||||||   | |||||||||||||||||     
T  29999893 atacaaaagagttacaagaaattagctttgacatgttcacaaagaacaaccctaatttctacccttttcccaatctc-accaatgaacaagacactcaac 29999991  T
Q  263 gattttca 270  Q
    ||||||||    
T  29999992 gattttca 29999999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 40632553 - 40632459
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| |||||||   |||||||||||||||||||||||||||| | ||||||||  ||||||| || |||||||    
T  40632553 cactatcaatgagttctt-acaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaactctaatttctacccatttt 40632459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 8648227 - 8648153
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    ||||| ||||||| | |||| ||||||||||||||||||| ||| | | |||||| |||||||| ||||||||||    
T  8648227 aaagagatacaaatgggttataagaaattagcttcaacaaactcacaatgaacaaccctaatttctatccatttt 8648153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 22628984 - 22629038
Alignment:
Q  166 caaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||||||||| ||||||||| |||||| ||||||||||||| ||| ||||||||    
T  22628984 caaaagagttataagaaattaacttcaataagctctccaagagcaatcctaattt 22629038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 44967900 - 44968020
Alignment:
Q  147 agttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatccatttt-tcaatctctttcc 244  Q
    |||| |||| ||||| ||||||| | ||||||||||||| |||||| |||||||||||||| | ||||||||||| || |||||||  ||||||||| ||    
T  44967900 agttttttacaaagagatacaaatg-gttacaagaaattggcttcagcaagctctccaagagcaaaacctaatttcta-ccattttcccaatctcttccc 44967997  T
Q  245 atgaacaagacactcaatgattt 267  Q
    | |||||| |  |||||||||||    
T  44967998 aagaacaacaggctcaatgattt 44968020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 6199961 - 6200018
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||||||||||||||| ||||||| ||||||||  | || |||||||||||||||||    
T  6199961 atacaaaagagttacaataaattagtttcaacaaagtgtctaagaacaaacctaattt 6200018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 269
Target Start/End: Complemental strand, 3677526 - 3677438
Alignment:
Q  181 aaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttc 269  Q
    ||||||||||||| ||| | | ||||||||| | ||||||  | || ||||||||| |||| |||||||| ||| ||||||||||||||    
T  3677526 aaattagcttcaataagtttttcaagaacaaccttaatttccacccgtttttcaatatcttcccatgaactagagactcaatgattttc 3677438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 371
Target Start/End: Complemental strand, 8648078 - 8647982
Alignment:
Q  276 agaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    ||||||||| ||||||||||||||||||   || | ||||||||  |||||||| |||||||||| | ||  ||||||| ||||| |||||||||||    
T  8648078 agaatctaacccccaaaagagaaccaacacataacatttgatttcactaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaa 8647982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 41639508 - 41639440
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    ||||||| | ||||||||||||||||||||| ||| || | |||||||| |||||||| || |||||||    
T  41639508 atacaaatgggttacaagaaattagcttcaaaaagttcacaaagaacaaccctaatttctacccatttt 41639440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 46703589 - 46703525
Alignment:
Q  157 aaagaaatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||| |||||||| | |||||||||||||||||| ||||||||| | |||||||| ||||||||    
T  46703589 aaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaattt 46703525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 13992373 - 13992448
Alignment:
Q  158 aagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc 233  Q
    |||| ||||||||||||||||||||||||| ||  ||||| || | |||||||| |||||||| || || ||||||    
T  13992373 aagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaaccctaatttctacccttttttc 13992448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 341
Target Start/End: Original strand, 27417189 - 27417255
Alignment:
Q  276 agaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggt 341  Q
    ||||||||| ||||||||||||||||||| |||  |||||||||  |||||||| |||| |||||||    
T  27417189 agaatctaacccccaaaagagaaccaacccttagtctttgatttcactaaggatcttcttttttggt 27417255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 41639351 - 41639277
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    ||||| ||||||| | ||||||||||||||||||||| ||| |  | |||||||| |||||||| || |||||||    
T  41639351 aaagagatacaaatgggttacaagaaattagcttcaaaaagtttacaaagaacaaccctaatttctacccatttt 41639277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 3739203 - 3739295
Alignment:
Q  178 aagaaattagcttcaacaagctctccaagaacaaac-ctaatttttatccatttt-tcaatctctttccatgaacaagacactcaatgatttt 268  Q
    |||||||||||||||| ||| | | ||||||||||  |||||||||| || |||| |||||||||||| | |||  ||| |||||||||||||    
T  3739203 aagaaattagcttcaataagttattcaagaacaaaatctaatttttaccctttttttcaatctctttcaaagaaacagagactcaatgatttt 3739295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 12743985 - 12744068
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||  ||||| || | |||||||| ||||||||    
T  12743985 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccctaattt 12744068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 12744107 - 12744190
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||  ||||| || | |||||||| ||||||||    
T  12744107 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccctaattt 12744190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 12745374 - 12745457
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||  ||||| || | |||||||| ||||||||    
T  12745374 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccctaattt 12745457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 24969856 - 24969793
Alignment:
Q  54 aagataaacaaacactccaataaatgtttgtccagttcggtccaacaatgacctactcttgggga 118  Q
    |||| |||||||||| |||| ||||||||  |||||||||||||||  ||||||||||| |||||    
T  24969856 aagagaaacaaacacaccaagaaatgtttacccagttcggtccaac-ttgacctactctggggga 24969793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 28684899 - 28684955
Alignment:
Q  164 tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||||||||||||||||| |||||| ||||||| | |||||||  | |||||||||    
T  28684899 tacaaaagagttacaagaagttagctccaacaagttatccaagagtacacctaattt 28684955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 39662348 - 39662388
Alignment:
Q  172 agttacaagaaattagcttcaacaagctctccaagaacaaa 212  Q
    ||||||||||||||||||||||||| || ||||||| ||||    
T  39662348 agttacaagaaattagcttcaacaatctttccaagagcaaa 39662388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 40632386 - 40632342
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt 319  Q
    |||||||||| ||||||||||||||||||| ||| | ||||||||    
T  40632386 tagaatctaacccccaaaagagaaccaacccttaacatttgattt 40632342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 51904499 - 51904551
Alignment:
Q  168 aaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||| ||||||||||| ||| |||| ||||||||||||| | |||||||    
T  51904499 aaagagttgcaagaaattagattcgacaaactctccaagaacatatctaattt 51904551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 1e-41; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 35138765 - 35138899
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 235  Q
    |||||||||  ||||||||| ||||| ||||||||||||| |||||||||| ||||||||| ||| |||||||||||| |||||| || |||||| ||||    
T  35138765 cactatcaatgagttctttacaaagagatacaaaagagttgcaagaaattaacttcaacaaactcaccaagaacaaacataatttctacccatttctcaa 35138864  T
Q  236 tctctttccatgaacaagacactcaatgattttca 270  Q
    |||||||||||||||||||||||||||||||||||    
T  35138865 tctctttccatgaacaagacactcaatgattttca 35138899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 75 - 270
Target Start/End: Original strand, 8166456 - 8166651
Alignment:
Q  75 aaatgtttgtccagttcggtccaacaatgacctactcttggggagagaggcattttcacttcactatcaagaagttctttagaaagaaatacaaaagagt 174  Q
    ||||||||  ||| || |||| |||||||||||||| ||||||||||||  || | | |||||||||||| |||||||||| ||||| ||||||||  ||    
T  8166456 aaatgtttacccaattaggtctaacaatgacctact-ttggggagagagaaatctccgcttcactatcaacaagttctttacaaagagatacaaaaaggt 8166554  T
Q  175 tacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaag--acactcaatgattttca 270  Q
    || |||| |||| ||||||||| ||||||||||||||||||||||| ||  ||||| |||||||| |||||||||||||  |||||||||||||||||    
T  8166555 tataagatattaacttcaacaaactctccaagaacaaacctaatttctactcatttatcaatctc-ttccatgaacaagacacactcaatgattttca 8166651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 131 - 270
Target Start/End: Original strand, 26323128 - 26323267
Alignment:
Q  131 cacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattt 230  Q
    ||||||||||||||  |||| ||||  |||| ||||||||  |||||||||||||||||||||||| |||| ||| ||||||||||||||||| || |||    
T  26323128 cacttcactatcaatgagttttttaccaagatatacaaaaaggttacaagaaattagcttcaacaaactcttcaaaaacaaacctaatttttaccctttt 26323227  T
Q  231 ttcaatctctttccatgaacaagacactcaatgattttca 270  Q
     |||||||| | |||||||||||||||| |||||| ||||    
T  26323228 ctcaatctcatcccatgaacaagacacttaatgatgttca 26323267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 147 - 266
Target Start/End: Complemental strand, 20937754 - 20937635
Alignment:
Q  147 agttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccat 246  Q
    ||||||||  ||||| ||||||||| |||||||||||||| |||||||||||||||||| ||||||| |||||| || | ||||| | ||||||||| ||    
T  20937754 agttcttttcaaagagatacaaaagggttacaagaaattaacttcaacaagctctccaaaaacaaacataatttctacctattttccgatctctttctat 20937655  T
Q  247 gaacaagacactcaatgatt 266  Q
    |||||||| |||||||||||    
T  20937654 gaacaagagactcaatgatt 20937635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 51398922 - 51398789
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt-ca 234  Q
    |||||||||  ||||||| | ||||| ||||||| ||||||||||||||||||||||||||| || | |||||||| |||||||| || |||||||| ||    
T  51398922 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagttcactaagaacaaccctaatttctacccatttttcca 51398824  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||  || ||||||||||||||||||||||||||    
T  51398823 atctc-atcaatgaacaagacactcaatgattttca 51398789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 34795795 - 34795685
Alignment:
Q  289 caaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtg 388  Q
    ||||||||||||| || ||| ||||||||||||||||||| |||||||||||||||| ||||||| ||||| || || ||||| |||||| |||||||||    
T  34795795 caaaagagaaccatcccttagcctttgattttctaaggatcttctcttttggtctcccaagactcacccaagtttcttacaaaaactctcctttgatgtg 34795696  T
Q  389 tttccaaaccc 399  Q
    | ||| |||||    
T  34795695 tatcccaaccc 34795685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 3148087 - 3148184
Alignment:
Q  173 gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttca 270  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| |||||||||| |||  ||||| | ||||||| |||||||    
T  3148087 gttacaagaaattagcttcaacaagctcttcaagaagaaacctaatttctatccatttctcaatctcttcccacaaacaaaagactcaattattttca 3148184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 20937585 - 20937481
Alignment:
Q  287 cccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatg 386  Q
    |||||||||||||||||| |||||||||||||| ||||| || |||||||||||||||| |||| || ||||| ||  |||||||||||| | |||||||    
T  20937585 cccaaaagagaaccaacctttatcctttgatttcctaagaatcttctcttttggtctcccaagaatcacccaagtttgtcacaaagactcccttttgatg 20937486  T
Q  387 tgttt 391  Q
    |||||    
T  20937485 tgttt 20937481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 85 - 254
Target Start/End: Original strand, 4055771 - 4055941
Alignment:
Q  85 ccagttcggtccaacaatgacctac-tcttggggagagaggcattttcacttcactatcaagaagttctttagaaagaaatacaaaagag-ttacaagaa 182  Q
    ||||||||| ||||||||||||||| ||| ||||||||||   | |||| | |||||||||  ||||  ||| ||||| ||||||||||| |||||||||    
T  4055771 ccagttcggcccaacaatgacctacatctgggggagagagatctcttcaatccactatcaatgagtttcttacaaagagatacaaaagaggttacaagaa 4055870  T
Q  183 attagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaaga 254  Q
    |||| |||  ||||| ||||||||||||| |||||||| || ||||||  ||||||||| ||||||||||||    
T  4055871 attaacttttacaagttctccaagaacaa-cctaatttctacccatttcccaatctcttcccatgaacaaga 4055941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 54 - 268
Target Start/End: Complemental strand, 32891295 - 32891080
Alignment:
Q  54 aagataaacaaacactccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagagaggcatttt--cacttcactatcaagaagttc 151  Q
    |||| |||||||||| |||| ||||| || ||||||||||||||||| ||||||||||  |||||||||   || |   || | |||||||||  |||||    
T  32891295 aagagaaacaaacacaccaagaaatgattatccagttcggtccaaca-tgacctactccgggggagagatttatctctccaatccactatcaacgagttc 32891197  T
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatccatttt-tcaatctctttccatgaa 249  Q
    || | ||||| ||||||| |||||||||||||||||||||||||||||| | |||||| |||| |||||| || ||||||| ||||||||   | | |||    
T  32891196 tt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacttaatttctacccattttctcaatctc-accgaagaa 32891099  T
Q  250 caagacactcaatgatttt 268  Q
    |||||||||||||||||||    
T  32891098 caagacactcaatgatttt 32891080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 53921589 - 53921696
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-aatctctttccatgaacaagacactcaa 261  Q
    ||||||| |||||||||||||||||||| ||||||||| | || |||||||||||||| || ||||||||| ||||||   | |||||||||||||||||    
T  53921589 atacaaatgagttacaagaaattagctttaacaagctcacaaacaacaaacctaatttctacccatttttccaatctcac-caatgaacaagacactcaa 53921687  T
Q  262 tgattttca 270  Q
    |||||||||    
T  53921688 tgattttca 53921696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 7762373 - 7762240
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||||||||||||||||||||||||||||||| || | |||||||| |||||||| || || |||| |||    
T  7762373 cactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctaccctttttctca 7762275  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||| ||||||||||||||||||||    
T  7762274 atctc-accaatgaataagacactcaatgattttca 7762240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 34491154 - 34491057
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  34491154 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 34491057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 178 - 270
Target Start/End: Complemental strand, 39127614 - 39127522
Alignment:
Q  178 aagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttca 270  Q
    ||||||||||||||||||||||| |||||||||||| |||||| ||   |||| ||||||||||  |||||| ||||| ||||||||||||||    
T  39127614 aagaaattagcttcaacaagctcaccaagaacaaacataatttatacttatttctcaatctcttctcatgaataagacgctcaatgattttca 39127522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 39153447 - 39153554
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| |||||||||||||||||||| ||||||||| | | ||||||||||||||| || |||||||  |||||||    ||||||||||||||||||    
T  39153447 atacaaatgagttacaagaaattagcttaaacaagctcacaatgaacaaacctaatttctacccattttcccaatctc-acacatgaacaagacactcaa 39153545  T
Q  262 tgattttca 270  Q
    |||||||||    
T  39153546 tgattttca 39153554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 136 - 275
Target Start/End: Complemental strand, 40735491 - 40735353
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| |||||||   ||||||| |||||||||||||||||||| | |||||||| |||||||| || ||||||| |||    
T  40735491 cactatcaatgagttctt-acaaagagatacaaactggttacaataaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttctca 40735393  T
Q  235 atctctttccatgaacaagacactcaatgattttcaatttt 275  Q
    |||||   | |||||||||||||||||||||||||| ||||    
T  40735392 atctc-accaatgaacaagacactcaatgattttcactttt 40735353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 157 - 260
Target Start/End: Complemental strand, 46860562 - 46860459
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagac 255  Q
    ||||| ||||||| | |||||||||||||||||||||||||||| | ||||||||||||||||| || ||||||| ||||||||   | |||||||||||    
T  46860562 aaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctacccattttctcaatctc-accaatgaacaagac 46860464  T
Q  256 actca 260  Q
    |||||    
T  46860463 actca 46860459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 34491320 - 34491226
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| |||||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||    
T  34491320 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttt 34491226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 44331653 - 44331520
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-a 234  Q
    ||||||||| |||||||| | ||||| ||||||| |  ||||||||||||||||||||||||||| | | |||||| |||||||| || ||||||| | |    
T  44331653 cactatcaataagttctt-acaaagagatacaaatggcttacaagaaattagcttcaacaagctcacaatgaacaaccctaatttctacccattttccta 44331555  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  44331554 atctc-accaatgaacaagacactcaatgattttca 44331520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 5236536 - 5236649
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagac 255  Q
    ||||| ||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||| || |||||||  |||||||   | |||||||||||    
T  5236536 aaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctc-accaatgaacaagac 5236634  T
Q  256 actcaatgattttca 270  Q
    |||||||||||||||    
T  5236635 actcaatgattttca 5236649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 147 - 269
Target Start/End: Complemental strand, 5373331 - 5373207
Alignment:
Q  147 agttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccattttt--caatctctttc 243  Q
    ||||| ||| ||||| ||| ||||| ||||||| ||||||||||||||||||||   ||||||||| |||||||| || || |||||  ||||||| |||    
T  5373331 agttccttacaaagagatataaaagggttacaataaattagcttcaacaagctcaaaaagaacaaagcctaatttctacccttttttcccaatctc-ttc 5373233  T
Q  244 catgaacaagacactcaatgattttc 269  Q
     |||||||||||||||||||||||||    
T  5373232 aatgaacaagacactcaatgattttc 5373207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 6095826 - 6095952
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 372  Q
    |||||||||| ||||||||||||||||||| ||| | ||||||||  |||||||| |||||||||||| ||  ||||||| ||||| ||||||||||| |    
T  6095826 tagaatctaacccccaaaagagaaccaacctttagcatttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatg 6095925  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  6095926 actctccactcatgtgtttcccaaccc 6095952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 25491022 - 25491116
Alignment:
Q  131 cacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatc 225  Q
    ||||||||||||||  | ||||||| ||||| |||||||||   || ||||||| ||||||||||||||||| ||||||||||||||||| ||||    
T  25491022 cacttcactatcaatgatttctttacaaagagatacaaaaggagtataagaaatcagcttcaacaagctctcaaagaacaaacctaatttctatc 25491116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 371
Target Start/End: Original strand, 49199697 - 49199795
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactc-gcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||| ||  |||||||  ||||| |||||||||||    
T  49199697 tagaatctaacccccaaaagagaaccaaccattagcctttgatttcactaaggatcttctcttttggtttcacaagactcaacccaagttgctcacaaa 49199795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 1313875 - 1313996
Alignment:
Q  147 agttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatccatttttcaatctctttcca 245  Q
    ||||||||  ||||| |||||||||  || |||||||||||||| |||||||||||||||||| |||| ||||||||| || ||| ||||||||||  ||    
T  1313875 agttcttttcaaagatatacaaaaggcttgcaagaaattagctttaacaagctctccaagaacaaaacataatttttacccttttctcaatctcttctca 1313974  T
Q  246 tgaacaagacactcaatgattt 267  Q
     ||| |||| ||||||| ||||    
T  1313975 agaataagagactcaataattt 1313996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 1683417 - 1683336
Alignment:
Q  286 ccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctca 367  Q
    |||||||||| |||||||| ||| ||||||||||||||||||| |||||||||||||||  ||||||| || || |||||||    
T  1683417 ccccaaaagataaccaacccttagcctttgattttctaaggatcttctcttttggtctcacaagactcaccaaagttgctca 1683336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 30236066 - 30235969
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||| ||||| |||| |||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  30236066 tagaatctaacccccaaaagagaaccaatcattagccttcgatttcactaaggatcttctcttttggtttcacaagactcacccaacttgctcacaaa 30235969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 22835088 - 22835195
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | |||||||||||||||||| ||||||||| | ||||||||||||||||| || |||||||  |||||||     |||||||||||||||||    
T  22835088 atacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacccattttcccaatctc-acaaatgaacaagacactcaa 22835186  T
Q  262 tgattttca 270  Q
    |||||||||    
T  22835187 tgattttca 22835195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 24635370 - 24635282
Alignment:
Q  132 acttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||||||  | ||  ||| ||||| |||||||| |||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  24635370 acttcactatcaatgaattgattataaagagatacaaaatagttacaaaaaattagcttcaacaaactctccaagaacaaacttaattt 24635282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 31314527 - 31314420
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | ||||||||||||||||||||||||| || | | |||||| |||||||| || ||||||| ||||||||   | |||||||||||||||||    
T  31314527 atacaaatgggttacaagaaattagcttcaacaagatcacaatgaacaaccctaatttctacccattttctcaatctc-acctatgaacaagacactcaa 31314429  T
Q  262 tgattttca 270  Q
    |||||||||    
T  31314428 tgattttca 31314420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 393
Target Start/End: Complemental strand, 36018792 - 36018672
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 372  Q
    |||||||||| ||||||||||||||||| |  || ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| ||||||||||| |    
T  36018792 tagaatctaaaccccaaaagagaaccaatccatagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatg 36018693  T
Q  373 actctcatttgatgtgtttcc 393  Q
    ||||||  || ||||||||||    
T  36018692 actctccattcatgtgtttcc 36018672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 40734580 - 40734473
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | ||||||||||||||| |||||||||||| | |||||||| |||||||| || |||||||  |||||||   | |||||||||||||||||    
T  40734580 atacaaatgtgttacaagaaattaggttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctc-accaatgaacaagacactcaa 40734482  T
Q  262 tgattttca 270  Q
    |||||||||    
T  40734481 tgattttca 40734473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 403
Target Start/End: Complemental strand, 46860413 - 46860282
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccat--tatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa- 371  Q
    |||||||||| ||||||||||||||||||| |  ||  ||||||||| |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||     
T  46860413 tagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaat 46860314  T
Q  372 gactctcatttgatgtgtttccaaaccctatg 403  Q
    |||||||   | |||||||||| | |||||||    
T  46860313 gactctccactcatgtgtttcccatccctatg 46860282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 7764572 - 7764442
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 235  Q
    |||||||||  ||||||| | ||||| |||||||||||||||||||||||||||| |||||| || | |||||||| |||||||| || ||  |||||      
T  7764572 cactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagctttaacaagttcacaaagaacaaccctaatttctaccc--ttttccc 7764476  T
Q  236 tctctttccatgaacaagacactcaatgattttca 270  Q
    ||||   | ||||||||||||||||||||||||||    
T  7764475 tctc-accaatgaacaagacactcaatgattttca 7764442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 278 - 353
Target Start/End: Original strand, 26323306 - 26323381
Alignment:
Q  278 aatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactc 353  Q
    ||||||| || |||||||||||||||| ||| | |||||||| ||||||||||||| ||||||||||| |||||||    
T  26323306 aatctaaccctcaaaagagaaccaacccttagcttttgatttcctaaggatattcttttttggtctcccaagactc 26323381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 30236233 - 30236101
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| |||||||   |||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||  ||    
T  30236233 cactatcaatgagttctt-acaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttccca 30236135  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||  || ||||||||||||||| ||||||||||    
T  30236134 atctc-atcaatgaacaagacactc-atgattttca 30236101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 44700538 - 44700671
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| |||||||   |||||||||||||||||||||||| ||| | |||||||| |||||||| || |||||||  ||    
T  44700538 cactatcaaagagttctt-acaaagagatacaaataggttacaagaaattagcttcaacaaactcacaaagaacaaccctaatttctacccattttccca 44700636  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  44700637 atctc-accaatgaacaagacactcaatgattttca 44700671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 399
Target Start/End: Complemental strand, 40913280 - 40913154
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 372  Q
    |||||||||| ||||||||||||||||||| ||| ||||| ||||  |||||||| |||||||||| | ||  ||||||| ||||| ||||||||||| |    
T  40913280 tagaatctaacccccaaaagagaaccaacccttaacctttaatttcactaaggatcttctcttttgctttcacaagactcacccaatttgctcacaaatg 40913181  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  40913180 actctccactcatgtgtttcccaaccc 40913154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 43401808 - 43401956
Alignment:
Q  85 ccagttcggtccaacaatgacctactcttggggagagaggcatttt--cacttcactatcaagaagttctttagaaagaaatacaaaa-gagttacaaga 181  Q
    ||||||||||||||| |||||||||||| | |||||||   ||||   || | |||||||||  ||||||| | ||||| ||| |||| | |||||||||    
T  43401808 ccagttcggtccaaccatgacctactctggaggagagattaatttctccaatccactatcaatgagttctt-acaaagagataaaaaatgcgttacaaga 43401906  T
Q  182 aattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    ||||||||||||||||||| | |||||||| |||||||| || |||||||    
T  43401907 aattagcttcaacaagctcacaaagaacaaccctaatttctacccatttt 43401956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 270
Target Start/End: Original strand, 9666560 - 9666660
Alignment:
Q  171 gagttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatccattttt-caatctctttccatgaacaagacactcaatgatttt 268  Q
    |||||||||||||||||||||||||||||| | |||||| ||| ||||||| || |||||||| |||||||     ||||||||||||||||||||||||    
T  9666560 gagttacaagaaattagcttcaacaagctcacaaagaacaaaatctaatttctacccatttttccaatctc-acaaatgaacaagacactcaatgatttt 9666658  T
Q  269 ca 270  Q
    ||    
T  9666659 ca 9666660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 399
Target Start/End: Complemental strand, 47304192 - 47304067
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaaga 373  Q
    |||||||||| ||||||||||||||||||| |||   ||||||||  ||||||||||||||||||||| |   ||||||| || || ||||||||||| |    
T  47304192 tagaatctaacccccaaaagagaaccaacccttagtttttgatttcactaaggatattctcttttggttttacaagactcacctaagttgctcacaaaaa 47304093  T
Q  374 ctctcatttgatgtgtttccaaaccc 399  Q
    |||||   | |||||||||| |||||    
T  47304092 ctctccactcatgtgtttcccaaccc 47304067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 760929 - 760822
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | |||||||||||||||||| ||||||||| | ||||||| ||||||||| || |||||||  |||||||     |||||||||||||||||    
T  760929 atacaaatgggttacaagaaattagcttaaacaagctcacaaagaacagacctaatttctacccattttcccaatctc-acaaatgaacaagacactcaa 760831  T
Q  262 tgattttca 270  Q
    |||||||||    
T  760830 tgattttca 760822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 5258224 - 5258338
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt--caatctctttccatgaacaaga 254  Q
    ||||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || || |||||  |||||||   | ||||||||||    
T  5258224 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttttcccaatctc-accaatgaacaaga 5258322  T
Q  255 cactcaatgattttca 270  Q
    ||||||||||||||||    
T  5258323 cactcaatgattttca 5258338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 148 - 270
Target Start/End: Original strand, 5433947 - 5434071
Alignment:
Q  148 gttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccatttt---tcaatctctttc 243  Q
    |||||||| ||||| ||| ||||| |||||||||||||||||| ||||||||| | ||||||||| |||||||| || |||||||    |||||||   |    
T  5433947 gttctttacaaagagatataaaagggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttcta-ccattttctcccaatctc-acc 5434044  T
Q  244 catgaacaagacactcaatgattttca 270  Q
     ||||||||||||||||||||||||||    
T  5434045 aatgaacaagacactcaatgattttca 5434071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 264
Target Start/End: Complemental strand, 1683630 - 1683457
Alignment:
Q  90 tcggtccaacaatgacctactcttggggagagaggcattttcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagct 189  Q
    |||||| |||||||| ||||| | ||| ||||||   | | ||||||||||| ||  ||||||||| ||||| ||  ||||  | ||||||||||||||     
T  1683630 tcggtctaacaatgatctactatggggaagagagatctctccacttcactataaatgagttctttacaaagagattaaaaac-gatacaagaaattagca 1683532  T
Q  190 tcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaatga 264  Q
    |||| |||||||| |||||| ||| |||||| || ||||||| ||||||| ||||||||||||||| |||| ||||    
T  1683531 tcaataagctctcgaagaacgaacttaatttcta-ccattttctcaatctatttccatgaacaagagactcgatga 1683457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 4570060 - 4569966
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| ||||||||||||||||||||||| |||||| | | |||||| |||||||| || |||||||    
T  4570060 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaataagctcacaatgaacaaccctaatttctacccatttt 4569966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 45095271 - 45095139
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || |||||||  ||    
T  45095271 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttcta-ccattttccca 45095174  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  45095173 atctc-accaatgaacaagacactcaatgattttca 45095139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 46173445 - 46173382
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||| ||||||| | |||||||||||||||||||||||||||| | |||||||| ||||||||    
T  46173445 aaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaattt 46173382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 134 - 264
Target Start/End: Complemental strand, 2020250 - 2020129
Alignment:
Q  134 ttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc 233  Q
    |||| ||||||  ||||||||| ||||||||||||||  |||| ||||||||||||||||         |||||||||| |||| || || |||||| ||    
T  2020250 ttcaatatcaatgagttctttacaaagaaatacaaaacggttataagaaattagcttcaa---------caagaacaaatctaacttctacccatttctc 2020160  T
Q  234 aatctctttccatgaacaagacactcaatga 264  Q
    |||||||| |||| ||||||| |||||||||    
T  2020159 aatctcttcccataaacaagagactcaatga 2020129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 399
Target Start/End: Complemental strand, 4569892 - 4569766
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 372  Q
    |||||||||| | ||||||||||||||||| ||| ||||||||||  |||| |||  ||||||||||| ||  ||||||| ||||| |||||||| ||||    
T  4569892 tagaatctaaccaccaaaagagaaccaacccttagcctttgatttcactaaagatcatctcttttggtttcacaagactcacccaagttgctcacaaaag 4569793  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  4569792 actctccactcatgtgtttcccaaccc 4569766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 278 - 399
Target Start/End: Original strand, 5434108 - 5434230
Alignment:
Q  278 aatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaagactc 376  Q
    ||||||| ||||||||||||| ||| | |||  ||||||||   ||||||| |||||||||||| ||| ||||||| ||||| |||||||| ||||||||    
T  5434108 aatctaacccccaaaagagaatcaatctttagtctttgattacataaggatcttctcttttggtttcccaagactcacccaacttgctcacaaaagactc 5434207  T
Q  377 tcatttgatgtgtttccaaaccc 399  Q
    ||   | |||||||||| |||||    
T  5434208 tccactcatgtgtttcctaaccc 5434230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 32744522 - 32744590
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt 232  Q
    ||||||| |||||||||||||||||||| ||||||||| | ||||||||| ||||||| || ||||||||    
T  32744522 atacaaatgagttacaagaaattagcttaaacaagctcacaaagaacaaa-ctaatttctacccattttt 32744590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 40612663 - 40612582
Alignment:
Q  189 ttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttca 270  Q
    ||||| || |||| |||||||||| |||||||||| |||| |  |||| ||||| ||||||||||| |||||||||||||||    
T  40612663 ttcaataaactcttcaagaacaaatctaatttttacccatctcacaatatcttttcatgaacaagagactcaatgattttca 40612582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 40612867 - 40612786
Alignment:
Q  189 ttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttca 270  Q
    ||||| || |||| |||||||||| |||||||||| |||| |  |||| ||||| ||||||||||| |||||||||||||||    
T  40612867 ttcaataaactcttcaagaacaaatctaatttttacccatctcacaatatcttttcatgaacaagagactcaatgattttca 40612786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 5260403 - 5260517
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt--caatctctttccatgaacaaga 254  Q
    ||||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || || |||||  |||||||   | |||| |||||    
T  5260403 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttttcccaatctc-accaatgaccaaga 5260501  T
Q  255 cactcaatgattttca 270  Q
    ||||||||||||||||    
T  5260502 cactcaatgattttca 5260517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 270
Target Start/End: Original strand, 23200196 - 23200330
Alignment:
Q  134 ttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc 233  Q
    |||||||||||  ||||||| | ||| | ||||||||| ||||||||||||||||||  ||||| || | ||||||||  ||||||| || |||||||||    
T  23200196 ttcactatcaatgagttctt-acaaaaagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaactctaatttcta-ccatttttc 23200293  T
Q  234 aatctctttccatgaacaagacactcaatgattttca 270  Q
        |||  ||| ||||||||||||||||||||||||    
T  23200294 ccaatctcaccaagaacaagacactcaatgattttca 23200330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 29196446 - 29196580
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccatttt-tc 233  Q
    |||||||||  ||||||| | ||||| ||||||| | ||| ||||||||||||||  |||||||| | ||||||||| |||||||| || |||||||  |    
T  29196446 cactatcaatgagttctt-acaaagagatacaaatgggttccaagaaattagctttgacaagctcacaaagaacaaaccctaatttctacccattttccc 29196544  T
Q  234 aatctctttccatgaacaagacactcaatgattttca 270  Q
    ||||||   | ||||||||||||||||||||||||||    
T  29196545 aatctc-accaatgaacaagacactcaatgattttca 29196580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 36018941 - 36018877
Alignment:
Q  157 aaagaaatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||| | |||||||| ||||||||    
T  36018941 aaagagatacaaaatgagttacaagaaattaacttcaacaagctcacaaagaacaaccctaattt 36018877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 41510372 - 41510300
Alignment:
Q  135 tcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaaga 207  Q
    ||||||||||  |||| |||| ||| | ||||||| ||||||||||||||||||||||||| | |||||||||    
T  41510372 tcactatcaattagttatttataaaaagatacaaacgagttacaagaaattagcttcaacatgttctccaaga 41510300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 43403839 - 43403899
Alignment:
Q  171 gagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||||||| ||||||||||||||| | |||||||| |||||||| || |||||||    
T  43403839 gagttacaagaaatgagcttcaacaagctcacaaagaacaagcctaatttctacccatttt 43403899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 49199529 - 49199624
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| |||||||| | |||||||||||||||||||||||||||| | |||||||| | |||||| || |||||||    
T  49199529 cactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccttaatttctacccatttt 49199624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 54593812 - 54593729
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||| |||||||||||||||||||| | |||||||| ||||||||    
T  54593812 cactatcaatgagttctt-acaaagagatacaaatgggttacaataaattagcttcaacaagctcacaaagaacaaccctaattt 54593729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 9581364 - 9581297
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattt 230  Q
    ||||||| | |||| ||||||||||||| ||||||||| | ||||||||||||||||| || ||||||    
T  9581364 atacaaatgggttaaaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacccattt 9581297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 19683949 - 19684043
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || |||||||    
T  19683949 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccatttt 19684043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 391
Target Start/End: Original strand, 35138975 - 35139050
Alignment:
Q  316 attttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtgttt 391  Q
    |||| |||||||| |||| ||||||||||| |||||||   ||| ||||||| ||||||||||||||||| |||||    
T  35138975 atttcctaaggatcttctattttggtctcccaagactcattcaagttgctcataaagactctcatttgatttgttt 35139050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 37408566 - 37408433
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || || ||||  ||    
T  37408566 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccctttttccca 37408468  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | |||||||||||||||||| |||||||    
T  37408467 atctc-accaatgaacaagacactcaataattttca 37408433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 39127473 - 39127418
Alignment:
Q  289 caaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctc 344  Q
    ||||||||||| |||| ||| |||||||||| |||||| |||||||||||||||||    
T  39127473 caaaagagaactaacccttagcctttgatttcctaagggtattctcttttggtctc 39127418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 50432734 - 50432797
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||| |||||||||| || |||||||||| |||||||| ||||||||||| || |||||||||    
T  50432734 aaagagatacaaaagatttgcaagaaattaacttcaacacgctctccaagagcagacctaattt 50432797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 31340281 - 31340335
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaa 211  Q
    ||||| ||||||| |||||||| ||||||||||||||||||||| | ||||||||    
T  31340281 aaagagatacaaatgagttacatgaaattagcttcaacaagctcacaaagaacaa 31340335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 33191939 - 33191865
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa 212  Q
    |||||||||  ||||||||| ||||| |||  |||  |||||||||| ||||||||||||||||||| |||||||||    
T  33191939 cactatcaatgagttctttacaaagacata--aaatggttacaagaacttagcttcaacaagctctctaagaacaaa 33191865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 54593645 - 54593549
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||| ||||| ||| ||||||||||  |||||||| |||| ||||||| ||  ||||||| | ||| |||||||||||    
T  54593645 tagaatctaacccccaaaagagaa-caacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaagttgctcacaaa 54593549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 240
Target Start/End: Original strand, 54739013 - 54739117
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaac-ctaatttttatccatttttca 234  Q
    |||||||||  ||||||||| | ||| ||| ||||||||||||  ||||||| |||||||||||| | |||||||||| ||||||| || |  |||||||    
T  54739013 cactatcaatgagttctttacagagagatataaaagagttacat-aaattagtttcaacaagctcacaaagaacaaacactaatttctaccattttttca 54739111  T
Q  235 atctct 240  Q
    ||||||    
T  54739112 atctct 54739117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 29682441 - 29682373
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    ||||||| | || ||||||||||||||| ||||||||| | |||||||||| |||||| || |||||||    
T  29682441 atacaaatgggtgacaagaaattagcttaaacaagctcacaaagaacaaacataatttctacccatttt 29682373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 29810976 - 29810893
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||||||||| || | ||||||||  |||||||    
T  29810976 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaactctaattt 29810893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 29813135 - 29813075
Alignment:
Q  173 gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc 233  Q
    ||||||||||||||||||||||||| || | |||||||| |||||||| || | |||||||    
T  29813135 gttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacctatttttc 29813075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 371
Target Start/End: Original strand, 41819751 - 41819846
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| | | ||||||||||||||| ||| | ||||||||  ||| ||| |||||||||||| || |||||||| | ||| |||||||||||    
T  41819751 tagaatctaaccgctaaaagagaaccaacccttagc-tttgatttcataaagatcttctcttttggtttcataagactcactcaagttgctcacaaa 41819846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 200
Target Start/End: Original strand, 28253347 - 28253390
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctc 200  Q
    ||||||||||||||  |||||||||||||| |||||||||||||    
T  28253347 aaagaaatacaaaatcgttacaagaaattaacttcaacaagctc 28253390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 264
Target Start/End: Original strand, 37761559 - 37761658
Alignment:
Q  166 caaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc-taatttttatccatttttcaatctctttccatgaacaagacactcaatga 264  Q
    |||||| ||||||| ||||||| || ||||||| | | ||||||||||| ||||||||| |  ||| ||| |||||||||| |||||||| ||| |||||    
T  37761559 caaaagggttacaataaattagttttaacaagcccacaaagaacaaaccttaatttttacctttttctcattctctttccaagaacaagagacttaatga 37761658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 223
Target Start/End: Original strand, 54744300 - 54744396
Alignment:
Q  127 ttttcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagc-ttcaacaagctctccaagaacaaacc-taattttta 223  Q
    |||||| | ||||||||  |||||||||| ||||| |||||||||  |||||| |||||||| |||||| ||||||||||||  ||||| |||||||||    
T  54744300 ttttcaatccactatcagtaagttctttacaaagagatacaaaag--ttacaataaattagccttcaactagctctccaagaggaaaccttaattttta 54744396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 371
Target Start/End: Original strand, 55302206 - 55302289
Alignment:
Q  289 caaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    ||||||||||||||||  || ||||||||||  |||||||| |||||||||||| ||  ||||||| | ||| |||||||||||    
T  55302206 caaaagagaaccaacccctagcctttgatttcactaaggatcttctcttttggtttcacaagactcactcaagttgctcacaaa 55302289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 23391995 - 23392052
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||||| | |||||||||||||| ||| ||||||||| | |||||||||| ||||||    
T  23391995 atacaaatgggttacaagaaattatcttaaacaagctcacaaagaacaaacttaattt 23392052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 392
Target Start/End: Original strand, 26323821 - 26323858
Alignment:
Q  355 cccaaattgctcacaaagactctcatttgatgtgtttc 392  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  26323821 cccaagttgctcacaaagactctcctttgatgtgtttc 26323858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 21334747 - 21334791
Alignment:
Q  78 tgtttgtccagttcggtccaacaatgacctactcttggggagaga 122  Q
    ||||| |||| |||||||||| ||||||||||||| |||||||||    
T  21334747 tgtttatccaattcggtccaataatgacctactctgggggagaga 21334791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 41819515 - 41819567
Alignment:
Q  70 ccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagaga 122  Q
    ||||||||||||   |||||| ||||||||||||||||||||| | |||||||    
T  41819515 ccaataaatgttcacccagtttggtccaacaatgacctactctggaggagaga 41819567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 9e-40; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 85 - 267
Target Start/End: Complemental strand, 35616329 - 35616147
Alignment:
Q  85 ccagttcggtccaacaatgacctactcttggggagagagg-cattttcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaa 183  Q
    |||| ||||||||||||||||||||||| || |||||||  |||| |   |||||||||||  ||||||||| ||||||||||||||| |||||||||||    
T  35616329 ccagctcggtccaacaatgacctactctaggtgagagagatcattatgt-ttcactatcaatgagttctttacaaagaaatacaaaagggttacaagaaa 35616231  T
Q  184 ttagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattt 267  Q
    ||| ||| ||| ||||||||||||||||||||||||| ||  ||||| |||||||||| || ||||||||| ||||||||||||    
T  35616230 ttaacttaaacgagctctccaagaacaaacctaatttctactcatttctcaatctcttcccgtgaacaagagactcaatgattt 35616147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 86 - 270
Target Start/End: Original strand, 10700658 - 10700841
Alignment:
Q  86 cagttcggtccaacaatgacctactcttggggagagaggcattttcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaatt 185  Q
    |||||||||  |||||||||||||| | ||||||||||   | | ||||||||||||||  ||||||||  ||||| ||||||||  |||| ||||| ||    
T  10700658 cagttcggtgaaacaatgacctactatgggggagagagatctctccacttcactatcaatgagttctttttaaagagatacaaaaatgttataagaa-tt 10700756  T
Q  186 agcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttca 270  Q
    ||||||||||||||||| ||||||||||||||||| || |  |||| |||||| ||| ||||||||| | |||||||||||||||    
T  10700757 agcttcaacaagctctctaagaacaaacctaatttctaccttttttccaatctattttcatgaacaaaatactcaatgattttca 10700841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 87 - 267
Target Start/End: Complemental strand, 316922 - 316740
Alignment:
Q  87 agttcggtccaacaatgacctactcttggggagagaggcatt--ttcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaat 184  Q
    |||||||||||||||||||||||||| |||||||||   ||   | |  | || ||||||  ||||||||| ||||| |||||||||  |||||||||||    
T  316922 agttcggtccaacaatgacctactctaggggagagattgatccctccgatccattatcaatgagttctttacaaagagatacaaaaggattacaagaaat 316823  T
Q  185 tagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattt 267  Q
    |||||||||||||||||||||||||||||||||||| || |  ||| ||||||| || || | ||||||| || |||||||||    
T  316822 tagcttcaacaagctctccaagaacaaacctaatttctacctttttctcaatcttttcccctaaacaagagacccaatgattt 316740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 10054876 - 10055006
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 235  Q
    |||||||||  ||||| ||| ||||| ||||||||| |||| ||||||||||||||||||| |||| ||||||||||| |||||| || |||||| ||||    
T  10054876 cactatcaatgagttcattacaaagagatacaaaag-gttataagaaattagcttcaacaaactcttcaagaacaaacataatttctacccatttctcaa 10054974  T
Q  236 tctctttccatgaacaagacactcaatgattt 267  Q
    |||||||| |||||||| | ||||||||||||    
T  10054975 tctctttctatgaacaatagactcaatgattt 10055006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 273 - 403
Target Start/End: Complemental strand, 316705 - 316577
Alignment:
Q  273 tttagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaag 372  Q
    |||| ||||||| ||||||||||||||||||| ||| |||||||||| ||| |||| |||||||||||||||| |||| || || || ||||||||||||    
T  316705 tttaaaatctaacccccaaaagagaaccaacccttagcctttgatttccta-ggattttctcttttggtctcccaagattcacc-aagttgctcacaaag 316608  T
Q  373 actctcatttgatgtgtttccaaaccctatg 403  Q
    |||||| |||||||||||||| |||| ||||    
T  316607 actctcttttgatgtgtttcccaaccttatg 316577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 54 - 266
Target Start/End: Complemental strand, 16452271 - 16452059
Alignment:
Q  54 aagataaacaaacactccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagagaggcatttt--cacttcactatcaagaagttc 151  Q
    ||||||||||||||| |||| ||||||||  |||||||||||||||  ||||||||||| |||||||||   || |   || | |||||| ||  |||||    
T  16452271 aagataaacaaacacaccaagaaatgtttacccagttcggtccaact-tgacctactctgggggagagatttatctctccaatccactatgaatgagttc 16452173  T
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt-caatctctttccatgaac 250  Q
    || | ||||| ||||||| | ||||||||||||||||||||||||||||   |||||||||| |||||| || |||||||| |||||||  || ||||||    
T  16452172 tt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcagaaagaacaaacttaatttctacccatttttccaatctc-atcaatgaac 16452075  T
Q  251 aagacactcaatgatt 266  Q
    ||||||||||||||||    
T  16452074 aagacactcaatgatt 16452059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 5057988 - 5057891
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||| |||||||||||| ||  ||||||||||||| |||||||||||    
T  5057988 tagaatctaacccccaaaagagaaccaacccttagcctttgattttactaaggatcttctcttttggtttcacaagactcgcccaagttgctcacaaa 5057891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 32609649 - 32609561
Alignment:
Q  131 cacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 219  Q
    ||||||| |||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| ||||| |||| |||||    
T  32609649 cacttcaatatcaataagttctttacaaagaaatacaaaagagttacaagaaattaacttcaacaaactctcaaagaataaacttaatt 32609561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 59 - 267
Target Start/End: Complemental strand, 30803014 - 30802807
Alignment:
Q  59 aaacaaacactccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagagaggcattttcacttcactatcaagaagttctttagaa 158  Q
    |||||||||| | || |||||||   || ||||||||||||||||||||| | |  |||||||||   | |   ||||| ||||||  ||||||||| ||    
T  30803014 aaacaaacacacaaaaaaatgttaaccctgttcggtccaacaatgacctattgtgcgggagagagatctctctgcttcattatcaacgagttctttacaa 30802915  T
Q  159 agaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacact 258  Q
    | | |||||||||  |||||| ||||||| |||||||||||| | |||||||||||||| || || |||||||||||||||||  |||||| |||| |||    
T  30802914 atagatacaaaaggattacaataaattagtttcaacaagctcacaaagaacaaacctaa-ttctacccatttttcaatctcttctcatgaataagagact 30802816  T
Q  259 caatgattt 267  Q
     ||||||||    
T  30802815 aaatgattt 30802807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 42309995 - 42310128
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcc-atttttca 234  Q
    ||||||||| |||||||| | ||||| |||||||||||||||||||||||||||||||||||||| | |||| ||||| | |||| || || |||| |||    
T  42309995 cactatcaataagttctt-acaaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagatcaaacttgatttctacccaatttctca 42310093  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | |||| |||||||||||||||||||||    
T  42310094 atctc-accaatgagcaagacactcaatgattttca 42310128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 275 - 393
Target Start/End: Original strand, 14689639 - 14689756
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagac 374  Q
    ||||||||| ||||||||||||||||||||  || ||||||||||||||||||| || ||||||||| ||| ||||||   | || ||||||||||| ||    
T  14689639 tagaatcta-tccccaaaagagaaccaacccctagcctttgattttctaaggatcttttcttttggtgtcccaagacttatctaagttgctcacaaatac 14689737  T
Q  375 tctcatttgatgtgtttcc 393  Q
    |||| ||| ||||||||||    
T  14689738 tctccttttatgtgtttcc 14689756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 275 - 399
Target Start/End: Complemental strand, 40147202 - 40147076
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 372  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||| ||||    
T  40147202 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaag 40147103  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  40147102 actctccactcatgtgtttcccaaccc 40147076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 13239859 - 13239726
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt--c 233  Q
    |||||||||  ||||||| | ||||| ||||||||||||||||||||||||||||||||||| || | ||||| || |||||||| || ||||||||  |    
T  13239859 cactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagcttcaacaagttcacaaagaaaaaccctaatttcta-ccattttttcc 13239762  T
Q  234 aatctctttccatgaacaagacactcaatgattttca 270  Q
    ||||||   | ||||||||||||||||||||||||||    
T  13239761 aatctc-accaatgaacaagacactcaatgattttca 13239726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 3326011 - 3325895
Alignment:
Q  147 agttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccat 246  Q
    ||||||||| ||||| ||||| ||  ||||||||||||||||||||||||||||| |||||||||| ||||||| || |  ||||||||| |||| | |     
T  3326011 agttctttacaaagagatacacaatggttacaagaaattagcttcaacaagctcttcaagaacaaaactaatttctacctttttttcaatttcttcctaa 3325912  T
Q  247 gaacaagacactcaatg 263  Q
    |||||||| || |||||    
T  3325911 gaacaagatacccaatg 3325895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 137 - 270
Target Start/End: Original strand, 33906091 - 33906220
Alignment:
Q  137 actatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaat 236  Q
    ||||||||  ||||||||| ||||| |||||||||  ||||||||| |||||||| |||||||||||||| || |||||||||| || ||||||  ||||    
T  33906091 actatcaatgagttctttacaaagagatacaaaaggattacaagaagttagcttcgacaagctctccaagcactaacctaatttatacccatttcacaat 33906190  T
Q  237 ctctttccatgaacaagacactcaatgattttca 270  Q
     |||| |||||    |||||||||||||| ||||    
T  33906191 ttcttcccatg----agacactcaatgatgttca 33906220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 304 - 392
Target Start/End: Original strand, 33906286 - 33906374
Alignment:
Q  304 cattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtgtttc 392  Q
    ||||| |||||||||| |||||||| |||||||||||| ||| ||||||| ||||| |||||||| ||| ||||| |||||||||||||    
T  33906286 cattagcctttgatttcctaaggatcttctcttttggtttcccaagactcacccaagttgctcactaagtctctcctttgatgtgtttc 33906374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 370
Target Start/End: Original strand, 16641168 - 16641263
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaa 370  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||| |||| || |||||||||||| ||  ||||||| || || ||| ||||||    
T  16641168 tagaatctaatccccaaaagagaaccaacctttagcctttgattttttaagtatcttctcttttggtttcacaagactcaccaaagttgttcacaa 16641263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 59 - 186
Target Start/End: Complemental strand, 30793322 - 30793195
Alignment:
Q  59 aaacaaacactccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagagaggcattttcacttcactatcaagaagttctttagaa 158  Q
    |||||||||| |||| ||||||||  |  |||||||||||||||||| |||||| ||||||||||   | | ||||||||||||||  ||||||||| ||    
T  30793322 aaacaaacacaccaagaaatgtttaccttgttcggtccaacaatgacttactctaggggagagagatctctccacttcactatcaattagttctttacaa 30793223  T
Q  159 agaaatacaaaagagttacaagaaatta 186  Q
    ||| ||||||||  ||||||| ||||||    
T  30793222 agagatacaaaatggttacaataaatta 30793195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 33831788 - 33831655
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt-ca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||||||| ||||||||| | ||||||||||||||||| || |||||||| ||    
T  33831788 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacccatttttcca 33831690  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||     ||||| ||||||||||||||||||||    
T  33831689 atctc-acaaatgaataagacactcaatgattttca 33831655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 39468609 - 39468742
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||| || |||||||  ||    
T  39468609 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttccca 39468707  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||  |  ||||||||||||||||||||||||||    
T  39468708 atctcact-aatgaacaagacactcaatgattttca 39468742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 40147369 - 40147275
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| |||||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||    
T  40147369 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacgaagaacaaccctaatttctacccatttt 40147275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 399
Target Start/End: Complemental strand, 27015473 - 27015347
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 372  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| |   ||||||| ||||| |||||||| ||||    
T  27015473 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggttttacaagactcacccaagttgctcacaaaag 27015374  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  27015373 actctccactcatgtgtttcccaaccc 27015347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 8566032 - 8566139
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | |||||||||||||||||| ||||||||| | |||||||||||||| || || ||||||| ||||||||     |||||||||||||||||    
T  8566032 atacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaagttctacccattttctcaatctc-acaaatgaacaagacactcaa 8566130  T
Q  262 tgattttca 270  Q
    |||||||||    
T  8566131 tgattttca 8566139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 13695761 - 13695884
Alignment:
Q  147 agttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccatttttcaatctctttcca 245  Q
    ||||||||| ||||| ||||||||| |||||||||||||||||| ||||||||| | ||||||||| |||||||| || || |||  ||||||| | | |    
T  13695761 agttctttacaaagagatacaaaagggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttgtacccttttcccaatctc-tccaa 13695859  T
Q  246 tgaacaagacactcaatgattttca 270  Q
     ||| |||| |||||||||||||||    
T  13695860 agaaaaagatactcaatgattttca 13695884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 32579338 - 32579250
Alignment:
Q  131 cacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 219  Q
    ||||||||| ||||  |||| |||| ||||| ||||| ||||||||||||||||||| ||||| ||||||||||| || ||||||||||    
T  32579338 cacttcactttcaatgagttatttacaaagacatacataagagttacaagaaattagtttcaataagctctccaaaaataaacctaatt 32579250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 8445823 - 8445764
Alignment:
Q  137 actatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaa 196  Q
    ||||||||  ||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  8445823 actatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttcaacaa 8445764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 13488311 - 13488178
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||| || |||||||  ||    
T  13488311 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttccca 13488213  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||| |  | |||||||||||||||||| |||||||    
T  13488212 atct-taccaatgaacaagacactcaataattttca 13488178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 277 - 371
Target Start/End: Complemental strand, 4160571 - 4160477
Alignment:
Q  277 gaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||| ||||||||||||||||||| ||| ||||| |||  |||||||| |||||||||||| ||| |||| || ||| | |||||||||||    
T  4160571 gaatctaacccccaaaagagaaccaacccttagcctttaattacctaaggatcttctcttttggtttcccaagattcaccctagttgctcacaaa 4160477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 25412868 - 25412736
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 235  Q
    |||||||||  ||||||| | ||||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || || |||  |||    
T  25412868 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttcccaa 25412770  T
Q  236 tctctttccatgaacaagacactcaatgattttca 270  Q
    ||||   | ||||||||||||||||||||||||||    
T  25412769 tctc-accaatgaacaagacactcaatgattttca 25412736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 38747093 - 38747019
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    ||||| ||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||    
T  38747093 aaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttt 38747019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 38746946 - 38746849
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||   ||||||| |||||||||||| ||  ||||||| ||||| |||||| ||||    
T  38746946 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcaataaggatcttctcttttggtttcacaagactcacccaagttgctcgcaaa 38746849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 5887502 - 5887609
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | ||| |||||||||||||| ||||||||| | ||||||||| ||||||| |||||||||| ||||||||     |||||||||||| ||||    
T  5887502 atacaaatgggttgcaagaaattagcttaaacaagctcacaaagaacaaatctaatttctatccattttctcaatctc-acaaatgaacaagacattcaa 5887600  T
Q  262 tgattttca 270  Q
    |||||||||    
T  5887601 tgattttca 5887609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 36074122 - 36074238
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt----caatctctttccatgaacaa 252  Q
    ||||| ||||||||||||||||||||||||||||  ||||| || | |||||||| |||||||| || || |||||    |||||||   | ||||||||    
T  36074122 aaagagatacaaaagagttacaagaaattagctttgacaagttcgcaaagaacaaccctaatttctacccttttttttcccaatctc-accaatgaacaa 36074220  T
Q  253 gacactcaatgattttca 270  Q
    ||||||||||||||||||    
T  36074221 gacactcaatgattttca 36074238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 213573 - 213479
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||||||| ||||||||| | |||||||| |||||||| || |||||||    
T  213573 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttaacaagctcacaaagaacaaccctaatttctacccatttt 213479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 533877 - 533744
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||| |||||||||||||||||||| | |||| ||| |||||||| || |||||||  ||    
T  533877 cactatcaatgagttctt-acaaagagatacaaatgggttacaaaaaattagcttcaacaagctcacaaagaccaaccctaatttctacccattttccca 533779  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||| ||||||||||||    
T  533778 atctc-accaatgaacaagacacgcaatgattttca 533744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 28278409 - 28278330
Alignment:
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||| ||||| ||||||| | |||||||||||||||||||||||||||| | |||||||| | |||||| || |||||||    
T  28278409 tttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccataatttctacccatttt 28278330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 42426295 - 42426428
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||| ||||||||||||||||||||  || | |||||||| |||||||| || ||||||| |||    
T  42426295 cactatcaatgagttctt-acaaagagatacaaatgggttgcaagaaattagcttcaacaatttcacaaagaacaaccctaatttctacccattttctca 42426393  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | |||||||||||||||||| |||||||    
T  42426394 atctc-accaatgaacaagacactcaataattttca 42426428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 42428490 - 42428623
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||||||||| || | ||||| || | |||||| || |||||||  ||    
T  42428490 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaaaaaccataatttctacccattttccca 42428588  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  42428589 atctc-accaatgaacaagacactcaatgattttca 42428623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 538113 - 538000
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagac 255  Q
    ||||| ||||||| | |||||||||||||||||||||||||||| | |||| ||| | |||||| || |||||||  |||||||  |  |||||||||||    
T  538113 aaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagagcaaccttaatttctacccattttcccaatctcact-aatgaacaagac 538015  T
Q  256 actcaatgattttca 270  Q
    || ||||||||||||    
T  538014 acgcaatgattttca 538000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 8038311 - 8038221
Alignment:
Q  131 cacttcactatcaagaagtt-ctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||||| ||||||| |||| ||||| ||||  ||||||||||||| |||||| |||||||||| ||||||||||||  ||| ||||||||    
T  8038311 cacttcaatatcaaggagtttctttaaaaagtgatacaaaagagttgcaagaagttagcttcaagaagctctccaagggcaatcctaattt 8038221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 14689484 - 14689585
Alignment:
Q  134 ttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc 233  Q
    ||||||| ||| || || |||| ||||| ||||||||   |||||| |||||||||||||||||| ||||| |||||||| |||||| || | |||||||    
T  14689484 ttcactaacaataaattatttacaaagagatacaaaaatattacaaaaaattagcttcaacaagcactccatgaacaaacataatttctaccaatttttc 14689583  T
Q  234 aa 235  Q
    ||    
T  14689584 aa 14689585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 270
Target Start/End: Complemental strand, 31183044 - 31182948
Alignment:
Q  173 gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttca 270  Q
    |||||||||||||| ||| ||||| ||| | |||||||| |||||||| || ||||||| |||||||     ||||||||||||||||||||||||||    
T  31183044 gttacaagaaattaacttaaacaaactcacaaagaacaatcctaatttctacccattttccaatctc-acaaatgaacaagacactcaatgattttca 31182948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 225
Target Start/End: Original strand, 32583322 - 32583431
Alignment:
Q  116 ggagagaggcattttcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacct 215  Q
    ||||||||| || | | ||||||||||||  ||||||||| ||| | ||||||||||| ||||   ||||||||||||||| || ||||||||||| | |    
T  32583322 ggagagaggtatctccgcttcactatcaatgagttctttacaaaaagatacaaaagagatacacataattagcttcaacaacctttccaagaacaatcat 32583421  T
Q  216 aatttttatc 225  Q
    ||||| ||||    
T  32583422 aatttctatc 32583431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 3075744 - 3075851
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | ||||||||||||||| |||| ||||||| | ||||||||||||||||| || | ||||| ||||||||     |||||| ||||||||||    
T  3075744 atacaaatgggttacaagaaattagattcagcaagctcacaaagaacaaacctaatttctacctattttctcaatctc-acaaatgaacgagacactcaa 3075842  T
Q  262 tgattttca 270  Q
    |||||||||    
T  3075843 tgattttca 3075851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 13343149 - 13343035
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt--caatctctttccatgaacaaga 254  Q
    ||||| |||||||||  |||||||||||||||||  ||||| || | |||||||| |||||||| || || |||||  |||||||   | ||||||||||    
T  13343149 aaagagatacaaaaggattacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttttcccaatctc-accaatgaacaaga 13343051  T
Q  255 cactcaatgattttca 270  Q
    ||||||||||||||||    
T  13343050 cactcaatgattttca 13343035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 30182676 - 30182563
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt--caatctctttccatgaacaaga 254  Q
    ||||| ||| ||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || ||||||||  |||||||   | ||||||||||    
T  30182676 aaagagatagaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttcta-ccatttttcccaatctc-accaatgaacaaga 30182579  T
Q  255 cactcaatgattttca 270  Q
    ||||||||||||||||    
T  30182578 cactcaatgattttca 30182563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 30683004 - 30683044
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaag 197  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  30683004 aaagaaatacaaaagggttacaagaaattagcttcaacaag 30683044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 16409583 - 16409480
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 235  Q
    |||||||||  |||||||   ||||| ||||||||||||||||||||||||| ||  ||||| || | |||||||| |||||||| || || |||| |||    
T  16409583 cactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaaccctaatttctaccctttttccaa 16409484  T
Q  236 tctc 239  Q
    ||||    
T  16409483 tctc 16409480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 19806449 - 19806361
Alignment:
Q  178 aagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-aatctctttccatgaacaagacactcaatgattt 267  Q
    ||||||||||||||||||| ||| | |||||||| |||||||| || ||||||||| ||||||   | |||||||||||||||||||||||    
T  19806449 aagaaattagcttcaacaaactcacaaagaacaa-cctaatttctacccatttttccaatctcac-caatgaacaagacactcaatgattt 19806361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 399
Target Start/End: Complemental strand, 213406 - 213284
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 372  Q
    |||||||||| |||||||||||||||     ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||| ||||    
T  213406 tagaatctaacccccaaaagagaaccc----ttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaag 213311  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  213310 actctccactcatgtgtttcccaaccc 213284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 5007621 - 5007569
Alignment:
Q  175 tacaagaaattagcttcaacaagctctccaagaa-caaacctaatttttatcc 226  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||| |||||    
T  5007621 tacaagaaattagctttaacaagctctccaagaataaaacctaatttctatcc 5007569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 16641017 - 16641073
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaac 213  Q
    ||||| ||||||||||||||  |||||| ||||||||||||||| | ||||||||||    
T  16641017 aaagagatacaaaagagttatcagaaatcagcttcaacaagctcacaaagaacaaac 16641073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 26177990 - 26177906
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||  |||||||   ||||| ||||||||||||||||||||||||| ||  ||||| || | |||||||| ||||||||    
T  26177990 cactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaaccctaattt 26177906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 37439249 - 37439166
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||  ||||||| | ||||| |||||||||||||||||||||||| |||  ||||| || | |||||||| ||||||||    
T  37439249 cactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattaactttgacaagttcacaaagaacaaccctaattt 37439166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 200
Target Start/End: Original strand, 9049422 - 9049465
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctc 200  Q
    ||||| ||||||||  ||||||||||||||||||||||||||||    
T  9049422 aaagagatacaaaatggttacaagaaattagcttcaacaagctc 9049465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 18441708 - 18441811
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 235  Q
    |||||||||  |||||||   ||||| ||||||||||||||||||||||||| ||  ||||| || | | |||||| |||||||| || || |||| |||    
T  18441708 cactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaggaacaaccctaatttctaccctttttccaa 18441807  T
Q  236 tctc 239  Q
    ||||    
T  18441808 tctc 18441811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 32576353 - 32576431
Alignment:
Q  132 acttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaa 211  Q
    |||||||||| ||  ||||||||| ||||| ||||||||  |||| ||| |||||||||||||||||| |||| ||||||    
T  32576353 acttcactattaattagttcttta-aaagagatacaaaatggttataagtaattagcttcaacaagctttccatgaacaa 32576431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 196
Target Start/End: Complemental strand, 42926955 - 42926916
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaa 196  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  42926955 aaagagatacaaatgagttacaagaaattagcttcaacaa 42926916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 220
Target Start/End: Complemental strand, 4160690 - 4160656
Alignment:
Q  186 agcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||||| ||||||||||||||||||||||    
T  4160690 agcttcaacaagttctccaagaacaaacctaattt 4160656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 260
Target Start/End: Original strand, 27637692 - 27637796
Alignment:
Q  157 aaagaaatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaaga 254  Q
    ||||| |||||||| | ||||||||||||||| || |||||||||   |||||||| |||||||| || ||||||| ||||||||   | ||||||||||    
T  27637692 aaagagatacaaaatgggttacaagaaattagtttaaacaagctcataaagaacaaccctaatttctacccattttctcaatctc-accaatgaacaaga 27637790  T
Q  255 cactca 260  Q
    ||||||    
T  27637791 cactca 27637796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 5058153 - 5058061
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | | ||||||||| |||||||||||||||| |  ||||||| |||||||| || |||||||    
T  5058153 cactatcaatgagttctt-acaaagagatacaaatgggatacaagaaaatagcttcaacaagctcac--agaacaaccctaatttctacccatttt 5058061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 8019526 - 8019464
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttg 339  Q
    |||||||||| |||||||| | |||||||| ||| ||||||||||||||||||| ||| ||||||    
T  8019526 tagaatctaacccccaaaa-ataaccaacc-ttagcctttgattttctaaggatcttcacttttg 8019464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 26170853 - 26170797
Alignment:
Q  164 tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||||||||||||||||| ||  ||||| || | |||||||| ||||||||    
T  26170853 tacaaaagagttacaagaaattagatttgacaagttcacaaagaacaatcctaattt 26170797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 8e-37; HSPs: 88)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 87 - 392
Target Start/End: Original strand, 12318533 - 12318826
Alignment:
Q  87 agttcggtccaacaatgacctactcttggggagagaggcattttcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaatta 186  Q
    |||||||||||| ||||| ||||| | ||||||||||   | |   ||||| ||||||  ||||||| |  |||| ||||||||  ||||||||||||||    
T  12318533 agttcggtccaataatgaactactatgggggagagagatctctctgcttcagtatcaatgagttcttaaagaagacatacaaaatggttacaagaaatta 12318632  T
Q  187 gcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttcaattttagaatctaatc 286  Q
    |||||||||||||||||| ||||||||||||||| || ||||||   |||||||  |||||||||||| ||||||||| |||||          || | |    
T  12318633 gcttcaacaagctctccatgaacaaacctaatttctacccatttccaaatctctacccatgaacaagaaactcaatga-tttca----------ctca-c 12318720  T
Q  287 cccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatg 386  Q
    ||| |||||||||||||| ||| |||||||||| | || ||| |||| ||||||||||| ||||||| ||||| ||||||| ||| |||||| |||||||    
T  12318721 ccccaaagagaaccaacccttagcctttgatttccaaaagattttctattttggtctcccaagactcacccaagttgctcataaaaactctcctttgatg 12318820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 131 - 254
Target Start/End: Original strand, 16914229 - 16914353
Alignment:
Q  131 cacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaa-ttagcttcaacaagctctccaagaacaaacctaatttttatccatt 229  Q
    ||||||||||||||  ||||||||| ||||| ||||||||| |||| |||||| |||||||||||| ||||||||||||||||| ||||||||| |||||    
T  16914229 cacttcactatcaatgagttctttacaaagagatacaaaagggttagaagaaacttagcttcaacaggctctccaagaacaaacataatttttacccatt 16914328  T
Q  230 tttcaatctctttccatgaacaaga 254  Q
    |  ||||||||| ||||||||||||    
T  16914329 tcccaatctcttcccatgaacaaga 16914353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 275 - 399
Target Start/End: Complemental strand, 41135760 - 41135636
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagac 374  Q
    |||||||||| ||||||||||||||||| | ||| ||||| |||| | || ||| |||||||||||| ||||||||||| ||||| || |||||||||||    
T  41135760 tagaatctaacccccaaaagagaaccaatccttagcctttaatttccaaatgatcttctcttttggtttcctaagactcacccaagtttctcacaaagac 41135661  T
Q  375 tctcatttgatgtgtttccaaaccc 399  Q
    |||| |||||||||||||| |||||    
T  41135660 tctcctttgatgtgtttcccaaccc 41135636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 130 - 270
Target Start/End: Complemental strand, 25652201 - 25652061
Alignment:
Q  130 tcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatt 229  Q
    |||||||||||||||  ||||||||| ||||| |||||| ||||||||||||||||||||||||||| ||||| || |||| || |||||| || | |||    
T  25652201 tcacttcactatcaaagagttctttacaaagagatacaagagagttacaagaaattagcttcaacaaactctcaaataacacacttaatttctaccaatt 25652102  T
Q  230 tttcaatctctttccatgaacaagacactcaatgattttca 270  Q
    | ||||| | ||  ||||||||| | |||||||||||||||    
T  25652101 tctcaatattttctcatgaacaaaatactcaatgattttca 25652061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 6808550 - 6808479
Alignment:
Q  147 agttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaat 218  Q
    ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6808550 agttctttacaaagagatacaaaagagttacaagaagttagcttcaacaagctctccaagaacaaacctaat 6808479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 133 - 267
Target Start/End: Original strand, 1050500 - 1050634
Alignment:
Q  133 cttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt 232  Q
    ||||||||||||  |||| |||| ||||| | ||||||  ||||||||||||||||||||| |||||||| ||||||| |||||||||| | ||||||      
T  1050500 cttcactatcaacgagttatttacaaagagacacaaaaatgttacaagaaattagcttcaataagctctcgaagaacacacctaattttcacccatttcc 1050599  T
Q  233 caatctctttccatgaacaagacactcaatgattt 267  Q
    |||||||||  ||||||||||| ||||||| ||||    
T  1050600 caatctcttcacatgaacaagagactcaataattt 1050634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 10925311 - 10925198
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccat-ttttcaatctctttccatgaacaagac 255  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| | |||||||| | |||||| ||||||| |||||||||||   | |||||||||||    
T  10925311 aaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccataatttctatccattttttcaatctc-accaatgaacaagac 10925213  T
Q  256 actcaatgattttca 270  Q
    |||||||||||||||    
T  10925212 actcaatgattttca 10925198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 148 - 267
Target Start/End: Original strand, 9109491 - 9109610
Alignment:
Q  148 gttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccat 246  Q
    |||||||| ||||| ||||||||| |||||||||||||| |||||||||| |||||||| | |||| |||||| | |||||||| |||||||| | ||||    
T  9109491 gttctttacaaagagatacaaaagggttacaagaaattaacttcaacaagttctccaagtaaaaacttaatttct-tccattttctcaatctcctaccat 9109589  T
Q  247 gaacaagacactcaatgattt 267  Q
    ||||||||||||||| |||||    
T  9109590 gaacaagacactcaaggattt 9109610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 31659346 - 31659213
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-a 234  Q
    ||||||||| |||||||| | ||||| ||||||| | |||||||||||||||||||||||||||| | |||||||  |||||||| || ||||||||| |    
T  31659346 cactatcaataagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacagccctaatttctacccatttttcca 31659248  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  31659247 atctcac-caatgaacaagacactcaatgattttca 31659213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 46065006 - 46064893
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagac 255  Q
    ||||| ||||| | |||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||  |||||||     |||||||||||    
T  46065006 aaagagatacacatgagttacaagaaattagcttcaacgagctcacaaagaacaaacctaatttttatccattttcccaatctc-acaaatgaacaagac 46064908  T
Q  256 actcaatgattttca 270  Q
    |||||||||||||||    
T  46064907 actcaatgattttca 46064893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 13138072 - 13138167
Alignment:
Q  173 gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattttca 270  Q
    |||||||||||||||||||||||||||| | ||||||  ||||||||| ||||||||||||||||||   | ||||||||||||||||||||||||||    
T  13138072 gttacaagaaattagcttcaacaagctcacaaagaac-gacctaatttctatccatttttcaatctc-accaatgaacaagacactcaatgattttca 13138167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 85 - 270
Target Start/End: Original strand, 47255347 - 47255532
Alignment:
Q  85 ccagttcggtccaacaatgacctactcttggggagagaggcatttt--cacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaa 182  Q
    |||||||||||||||||||||||||||| | |||||||   || |   || | |||||||||  ||||||| | ||||| ||||||| | ||||||||||    
T  47255347 ccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaa 47255445  T
Q  183 attagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 270  Q
    |||||||||||||||||| | |||||||| |||||||| || ||||||||| ||||||   | ||||||||||||||| ||||||||||    
T  47255446 attagcttcaacaagctcacaaagaacaaccctaatttctacccatttttccaatctcac-caatgaacaagacactc-atgattttca 47255532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 15820498 - 15820282
Alignment:
Q  54 aagataaacaaacactccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagagaggcattt--tcacttcactatcaagaagttc 151  Q
    |||| |||||||||| |||||||||||||  | |||||| ||||||  ||||||||||| |  ||||||   || |  ||| | |||||||||  |||||    
T  15820498 aagagaaacaaacacaccaataaatgtttacctagttcgatccaact-tgacctactctggatgagagatttatctcttcaatgcactatcaatgagttc 15820400  T
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccat-ttttcaatctctttccatgaac 250  Q
    || | ||||| ||||||| | |||||||||||||||||||||||||||| | |||||||||||||||||||| |||| ||| |||| ||   | | ||||    
T  15820399 ttaa-aaagagatacaaatgtgttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttttacccatctttccaatatc-accaaagaac 15820302  T
Q  251 aagacactcaatgattttca 270  Q
    ||||||||||||||||||||    
T  15820301 aagacactcaatgattttca 15820282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 399
Target Start/End: Complemental strand, 19754435 - 19754306
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatt----ttctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-a 369  Q
    |||||||||| |||||||||||||||||||||||||||||||||    || ||||||| |||||||||||| ||  ||||||| ||||| |||||||| |    
T  19754435 tagaatctaacccccaaaagagaaccaaccattatcctttgatttcacttataaggattttctcttttggtttcacaagactcacccaagttgctcacaa 19754336  T
Q  370 aagactctcatttgatgtgtttccaaaccc 399  Q
    |||||||||   | |||||||||| |||||    
T  19754335 aagactctccactcatgtgtttcccaaccc 19754306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 22079414 - 22079307
Alignment:
Q  147 agttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-aatctctttcca 245  Q
    ||||||||| ||||| ||||||||  |||||||||||||||||| ||||||||| | |||||||||| |||||| || ||||||||| |||||||| |||    
T  22079414 agttctttacaaagagatacaaaatggttacaagaaattagctttaacaagctcacaaagaacaaacataatttcta-ccatttttccaatctcttccca 22079316  T
Q  246 tgaacaaga 254  Q
    |||||||||    
T  22079315 tgaacaaga 22079307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 371
Target Start/End: Original strand, 34602567 - 34602663
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| | ||||||||||||||||| ||| |||||||||| |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  34602567 tagaatctaacctccaaaagagaaccaacccttagcctttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 34602663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 34603516 - 34603420
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| | ||||||||||||||||| ||| |||||||||| |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  34603516 tagaatctaacctccaaaagagaaccaacccttagcctttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 34603420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 3156973 - 3156840
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||| || ||||||| |||    
T  3156973 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttctca 3156875  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  3156874 atctc-accaatgaacaagacactcaatgattttca 3156840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 4552723 - 4552829
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | |||||||||||||||||||||||||||| | ||| ||||||||||||| || ||||||| ||||||||   | |||||||||||||||||    
T  4552723 atacaaaggggttacaagaaattagcttcaacaagctcacaaaggacaaacctaatttctacccattttctcaatctc-accaatgaacaagacactcaa 4552821  T
Q  262 tgattttc 269  Q
    ||||||||    
T  4552822 tgattttc 4552829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 49918458 - 49918325
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||| || ||||||| |||    
T  49918458 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttctca 49918360  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  49918359 atctc-accaatgaacaagacactcaatgattttca 49918325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 275 - 399
Target Start/End: Complemental strand, 47115112 - 47114986
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 372  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||   ||||||| |||||||||||| ||  ||||||| ||||| |||||||| ||||    
T  47115112 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcattaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaag 47115013  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||  || |||||||||| |||||    
T  47115012 actctccattcatgtgtttcccaaccc 47114986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 50169290 - 50169403
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-aatctctttccatgaacaagac 255  Q
    ||||| ||||||| ||||||||||||||||||||  |||||||| | |||||||| |||||||| || ||||||||| ||||||   | |||||||||||    
T  50169290 aaagagatacaaatgagttacaagaaattagctttgacaagctcacaaagaacaaccctaatttctacccatttttccaatctcac-caatgaacaagac 50169388  T
Q  256 actcaatgattttca 270  Q
    |||||||||||||||    
T  50169389 actcaatgattttca 50169403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 11348639 - 11348542
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  11348639 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 11348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 371
Target Start/End: Original strand, 31925933 - 31926030
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||| ||  ||| ||| ||||| |||||||||||    
T  31925933 tagaatctaacccccaaaagagaaccaaccattagcctttgatttcactaaggatcttctcttttggtttcacaagtctcacccaagttgctcacaaa 31926030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 8550873 - 8550980
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| |||||||||||||||||||| ||||||||| | ||||||||||||||||| || |||||||  |||||||     |||||||||||||||||    
T  8550873 atacaaatgagttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacccattttcccaatctc-acaaatgaacaagacactcaa 8550971  T
Q  262 tgattttca 270  Q
    |||||||||    
T  8550972 tgattttca 8550980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 37282762 - 37282884
Alignment:
Q  147 agttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccatttttcaatctctttcca 245  Q
    ||||||||| ||||| || |||||| ||||| | |||||||||||||||||||| | | ||||||| |||||||| || ||||||||||||||| | | |    
T  37282762 agttctttacaaagagatgcaaaagggttaccataaattagcttcaacaagctcacaaggaacaaaccctaatttata-ccatttttcaatctc-tccaa 37282859  T
Q  246 tgaacaagacactcaatgattttca 270  Q
    |||||||||||||||||| ||||||    
T  37282860 tgaacaagacactcaatggttttca 37282884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 403
Target Start/End: Complemental strand, 28242329 - 28242199
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 372  Q
    |||||||||| ||| |||||||||||||||  || ||||||||||  ||||||||||||||||||||| ||  ||||||| ||||| ||||||||||| |    
T  28242329 tagaatctaacccctaaaagagaaccaacccatagcctttgatttcactaaggatattctcttttggtttcacaagactcacccaagttgctcacaaatg 28242230  T
Q  373 actctcatttgatgtgtttccaaaccctatg 403  Q
    ||||||   | |||||||||| |||| ||||    
T  28242229 actctccactcatgtgtttcccaaccttatg 28242199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 37503650 - 37503747
Alignment:
Q  173 gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 270  Q
    ||||||||||||||||||||||||| || | |||||||| ||||||||||| |||||||  |||||||   | ||||||||||||||||||||||||||    
T  37503650 gttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttttacccattttcccaatctc-accaatgaacaagacactcaatgattttca 37503747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 85 - 220
Target Start/End: Original strand, 42297982 - 42298118
Alignment:
Q  85 ccagttcggtccaacaatgacctactcttggggagagaggcattt--tcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaa 182  Q
    ||||||||||||||| |||||||||||| | |||||||   || |  ||| | |||||||||  ||||||| | ||||| ||||||| ||||||||||||    
T  42297982 ccagttcggtccaaccatgacctactctggaggagagattgatctcttcaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaa 42298080  T
Q  183 attagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||||||||||| | || ||||| ||||||||    
T  42298081 attagcttcaacaagctcacaaaaaacaaccctaattt 42298118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 193552 - 193455
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  |||||||  |||| |||||||||||    
T  193552 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcatccaagttgctcacaaa 193455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 4535535 - 4535624
Alignment:
Q  131 cacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||| ||||||||  ||||||||| ||||| ||||||||  |||||||||||||  |||||| ||||||||||||||||||| ||||||    
T  4535535 cacttaactatcaatgagttctttacaaagagatacaaaaatgttacaagaaattgacttcaataagctctccaagaacaaacttaattt 4535624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 7482459 - 7482583
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaaga 373  Q
    |||||||||| ||||||||||||||||||| ||| | |||||||| |||||||| ||||||||| || ||  ||||||| ||||| |||||||| |||||    
T  7482459 tagaatctaacccccaaaagagaaccaacccttagc-tttgatttcctaaggatcttctctttttgtttcacaagactcacccaagttgctcacaaaaga 7482557  T
Q  374 ctctcatttgatgtgtttccaaaccc 399  Q
    |||||   | |||||||||| |||||    
T  7482558 ctctccactcatgtgtttcccaaccc 7482583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 29136188 - 29136091
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| |||||||||||||| |||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  29136188 tagaatctaacccccaaaagagaactaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 29136091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 834253 - 834360
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | |||||||||||||||||| ||||||||| | |||||||| |||||||| ||||||||||  |||||||     |||||||||||||||||    
T  834253 atacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctatccattttcccaatctc-acaaatgaacaagacactcaa 834351  T
Q  262 tgattttca 270  Q
    |||||||||    
T  834352 tgattttca 834360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 3460804 - 3460728
Alignment:
Q  137 actatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaac 213  Q
    |||||||| | |||||||| ||||| ||||||||| ||||||| |||||||||||||||||||| | ||||||||||    
T  3460804 actatcaatatgttctttacaaagatatacaaaagggttacaataaattagcttcaacaagctcacaaagaacaaac 3460728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 11348806 - 11348723
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||  ||||||| ||||||| ||||||| | |||||||||||||||||||||||||||| | |||||||| ||||||||    
T  11348806 cactatcaatgagttctt-agaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaattt 11348723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 28220286 - 28220419
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-a 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||| || ||||||| | |    
T  28220286 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttccga 28220384  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||| ||||||||||||||||||||    
T  28220385 atctc-accaatgaataagacactcaatgattttca 28220419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 28265614 - 28265747
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||||||||||||||||| | | |||||| |||||||| || | |||||  ||    
T  28265614 cactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaacaaccctaatttctacctattttccca 28265712  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  28265713 atctc-gccaatgaacaagacactcaatgattttca 28265747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 41361022 - 41360928
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||| |||||||||||| | ||||||||||||||||| || |||||||    
T  41361022 cactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaacctaatttctacccatttt 41360928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 193699 - 193587
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagac 255  Q
    ||||| ||||||| |||||||||||||||||||||||||||||    |||||||| |||||||| || ||||||| ||||||||   | |||||||||||    
T  193699 aaagagatacaaatgagttacaagaaattagcttcaacaagctaataaagaacaaccctaatttctacccattttctcaatctc-accaatgaacaagac 193601  T
Q  256 actcaatgattttca 270  Q
    |||| ||||||||||    
T  193600 actc-atgattttca 193587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 29136335 - 29136261
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    ||||||||||||| | ||| |||||||||||||||||||||||| | |||||||| |||||||| || |||||||    
T  29136335 aaagaaatacaaatgggttccaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttt 29136261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 399
Target Start/End: Complemental strand, 37168238 - 37168112
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 372  Q
    |||||||||| ||||||||||||| ||||| ||| ||||||||||  |||||||| ||||||||| || ||  ||||||| ||||| |||||||| ||||    
T  37168238 tagaatctaacccccaaaagagaatcaacctttagcctttgatttcactaaggatcttctcttttagtttcacaagactcacccaagttgctcacaaaag 37168139  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  37168138 actctccactcatgtgtttcccaaccc 37168112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 37879138 - 37879264
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 372  Q
    |||||||||| ||||||||||||||||| | ||| ||||||||||  |||||||| |||||||||| | ||  ||||||| ||||| |||||||| ||||    
T  37879138 tagaatctaacccccaaaagagaaccaatccttagcctttgatttcactaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaaag 37879237  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  37879238 actctccactcatgtgtttcccaaccc 37879264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 208
Target Start/End: Original strand, 2262950 - 2263106
Alignment:
Q  54 aagataaacaaacactccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagagaggcattt--tcacttcactatcaagaagttc 151  Q
    |||| |||||||||  |||| ||||||||   |||||||| ||||||||||||||| ||  |||| |||   || |  ||| | ||||||||| ||||||    
T  2262950 aagaaaaacaaacataccaagaaatgtttactcagttcggaccaacaatgacctaccctaagggaaagattgatctcttcaatccactatcaataagttc 2263049  T
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaa 208  Q
    |||| ||| | ||| ||||| |||||||||||||| ||||||||||||| |||||||    
T  2263050 tttacaaaaagatataaaagggttacaagaaattatcttcaacaagctcaccaagaa 2263106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 371
Target Start/End: Original strand, 13547316 - 13547413
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  ||||| || |||||||||||| ||  |||| || ||||| |||||||||||    
T  13547316 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagtatcttctcttttggtttcacaagattcacccaagttgctcacaaa 13547413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 371
Target Start/End: Original strand, 13549227 - 13549324
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  ||||| || |||||||||||| ||  |||| || ||||| |||||||||||    
T  13549227 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagtatcttctcttttggtttcacaagattcacccaagttgctcacaaa 13549324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 19752626 - 19752529
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||| ||||| ||||||||||  |||||||| |||||||||||| ||  |||||||  | || |||||||||||    
T  19752626 tagaatctaacccccaaaagagaaccaatcattagcctttgatttcactaaggatcttctcttttggtttcacaagactcatctaagttgctcacaaa 19752529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 233
Target Start/End: Complemental strand, 19754603 - 19754507
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc 233  Q
    |||||||||  ||||||| | ||||| |||||||   |||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||||    
T  19754603 cactatcaatgagttctt-acaaagagatacaaatcggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttttc 19754507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 371
Target Start/End: Original strand, 37033300 - 37033397
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||| |||||||||||||||  || ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  37033300 tagaatctaaccccaaaaagagaaccaacccatagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 37033397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 196994 - 197101
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| |||||||||||||||| ||| ||||||||| | |||||||| |||||||| || | ||||| ||||||||     |||||||||||||||||    
T  196994 atacaaatgagttacaagaaattaacttaaacaagctcacaaagaacaaccctaatttctaccaattttctcaatctc-acaaatgaacaagacactcaa 197092  T
Q  262 tgattttca 270  Q
    |||||||||    
T  197093 tgattttca 197101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 3189412 - 3189305
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-aatctctttccatgaacaagacactcaa 261  Q
    |||||||||||||||| |||||||||||||||||| || | |||||||| |||||||| || || |||| | ||||||   | ||||||||||||||||     
T  3189412 atacaaaagagttacaggaaattagcttcaacaagttcacaaagaacaaccctaatttataccctttttccaaatctc-accaatgaacaagacactcag 3189314  T
Q  262 tgattttca 270  Q
    |||||||||    
T  3189313 tgattttca 3189305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 3198229 - 3198122
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-aatctctttccatgaacaagacactcaa 261  Q
    |||||||||||||||| |||||||||||||||||| || | |||||||| |||||||| || || |||| | ||||||   | ||||||||||||||||     
T  3198229 atacaaaagagttacaggaaattagcttcaacaagttcacaaagaacaaccctaatttataccctttttccaaatctc-accaatgaacaagacactcag 3198131  T
Q  262 tgattttca 270  Q
    |||||||||    
T  3198130 tgattttca 3198122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 3207068 - 3206961
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-aatctctttccatgaacaagacactcaa 261  Q
    |||||||||||||||| |||||||||||||||||| || | |||||||| |||||||| || || |||| | ||||||   | ||||||||||||||||     
T  3207068 atacaaaagagttacaggaaattagcttcaacaagttcacaaagaacaaccctaatttataccctttttccaaatctc-accaatgaacaagacactcag 3206970  T
Q  262 tgattttca 270  Q
    |||||||||    
T  3206969 tgattttca 3206961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 270
Target Start/End: Complemental strand, 19752758 - 19752661
Alignment:
Q  173 gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt--tcaatctctttccatgaacaagacactcaatgattttca 270  Q
    |||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||  ||||||||   | ||||||||||||||| ||||||||||    
T  19752758 gttacaagaaattagcttcaacaagctcgcaaagaacaaccctaatttctacccattttactcaatctc-accaatgaacaagacactc-atgattttca 19752661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 44455242 - 44455135
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| ||||||||||||||||| ||||||||| || | |||||||| |||||||| || |||||||  |||||||   | |||||||||||||||||    
T  44455242 atacaaatgagttacaagaaattagtttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctc-accaatgaacaagacactcaa 44455144  T
Q  262 tgattttca 270  Q
    || ||||||    
T  44455143 tggttttca 44455135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 45644414 - 45644548
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatccatttt-tc 233  Q
    |||||||||  ||||||| | ||||| ||||||| ||||| ||||||||||||||  |||||||| | |||||| |||| |||||| |||||||||| ||    
T  45644414 cactatcaatgagttctt-acaaagagatacaaatgagttgcaagaaattagctttgacaagctcacaaagaacaaaacttaatttctatccattttctc 45644512  T
Q  234 aatctctttccatgaacaagacactcaatgattttca 270  Q
    ||||||   | |||||||||||||| |||||||||||    
T  45644513 aatctc-accaatgaacaagacacttaatgattttca 45644548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 13547149 - 13547243
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||| |||||||||||||||| | |||||||| |||||||| || |||||||    
T  13547149 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaaatagcttcaacaagctcacaaagaacaaccctaatttctacccatttt 13547243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 31925767 - 31925899
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 235  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||||||||||||||||| | | |||||  |||||||| || ||||||||| |    
T  31925767 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaacatccctaatttctacccatttttcca 31925865  T
Q  236 tctctttcc-atgaacaagacactcaatgattttca 270  Q
     ||||  || ||||||||||||||| ||||||||||    
T  31925866 -ctctcaccaatgaacaagacactc-atgattttca 31925899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 928051 - 928113
Alignment:
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc 214  Q
    |||| ||||| || |||||| |||||||||||||||||||||||||||| | |||||||||||    
T  928051 tttacaaagagatccaaaagggttacaagaaattagcttcaacaagctcacaaagaacaaacc 928113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 393
Target Start/End: Complemental strand, 22079261 - 22079144
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagac 374  Q
    |||||||||| |||||||||||||| | || ||| ||||||||||  |||| || || | ||||||| | | ||||||| || || ||||||||||||||    
T  22079261 tagaatctaacccccaaaagagaacaatcc-ttagcctttgatttcataagcatcttatattttggtttgccaagactcacctaagttgctcacaaagac 22079163  T
Q  375 tctcatttgatgtgtttcc 393  Q
    ||||  |||||||||||||    
T  22079162 tctcccttgatgtgtttcc 22079144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 134 - 270
Target Start/End: Original strand, 37559926 - 37560062
Alignment:
Q  134 ttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagc-ttcaacaagctctccaagaacaaacctaatttttatccattttt 232  Q
    |||||||||||  ||||||| | ||||| ||||||| | |||||||||||||||| ||||||||| || | ||||||||  ||||||| || |||||||     
T  37559926 ttcactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagctttcaacaagttcacaaagaacaactctaatttctacccattttc 37560024  T
Q  233 c-aatctctttccatgaacaagacactcaatgattttca 270  Q
    | ||||||   | ||||||||||||||||||||||||||    
T  37560025 ctaatctc-accaatgaacaagacactcaatgattttca 37560062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 133 - 267
Target Start/End: Complemental strand, 41135932 - 41135798
Alignment:
Q  133 cttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt 232  Q
    ||||| ||||||  ||||||||| ||| | |||||||||  ||||||||||||| |||||| ||| ||| |||||||||| ||||||| || || ||||     
T  41135932 cttcagtatcaacgagttctttacaaatagatacaaaaggtttacaagaaattaacttcaaaaagttcttcaagaacaaatctaatttctaccctttttc 41135833  T
Q  233 caatctctttccatgaacaagacactcaatgattt 267  Q
     | |||| |  || |||||||| ||||||||||||    
T  41135832 tattctcctcacaggaacaagagactcaatgattt 41135798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 42298202 - 42298328
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 372  Q
    |||||||||| ||||||||||||||||||  ||| ||||||||||  || ||||| |||||||||||| ||  ||||||| ||||| |||||| |||| |    
T  42298202 tagaatctaacccccaaaagagaaccaactcttagcctttgatttcacttaggatcttctcttttggtttcacaagactcacccaagttgctcgcaaatg 42298301  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  42298302 actctccactcatgtgtttcccaaccc 42298328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 1485825 - 1485914
Alignment:
Q  132 acttcactatcaagaagtt-ctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||||||  |||| ||||| ||| | ||||||||| ||||||||||||||  |||||||||| ||||||||| || ||||||||    
T  1485825 acttcactatcaaagagtttctttataaatagatacaaaagggttacaagaaattatattcaacaagcactccaagaaaaatcctaattt 1485914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 7482288 - 7482384
Alignment:
Q  134 ttcactatcaagaagttctttagaaagaaatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattt 230  Q
    |||||||||||  ||||||| | ||||| |||||||| | |||||||||||||||||| ||||||||| | |||||||| |||||||| || ||||||    
T  7482288 ttcactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctacccattt 7482384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 37033170 - 37033227
Alignment:
Q  174 ttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    ||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||    
T  37033170 ttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttt 37033227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 260
Target Start/End: Complemental strand, 34603648 - 34603561
Alignment:
Q  173 gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcca-tttttcaatctctttccatgaacaagacactca 260  Q
    |||||||||||||||||| ||||||||| | |||||||| |||||||| || ||| ||||||||||||   | ||||||||||||||||    
T  34603648 gttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctacccattttttcaatctc-accaatgaacaagacactca 34603561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 36683771 - 36683715
Alignment:
Q  164 tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||| |||||||||||||||||||||||||| ||| | ||||| |||||||||||    
T  36683771 tacaaatgagttacaagaaattagcttcaacaaactcacaaagaataaacctaattt 36683715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 37168406 - 37168311
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| |||||||| | |||||||||||||||||| ||||||||| | |||||||| |||||||| || |||||||    
T  37168406 cactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctacccatttt 37168311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 254
Target Start/End: Complemental strand, 13938298 - 13938128
Alignment:
Q  85 ccagttcggtccaacaatgacctac-tcttggggagagaggcattttcacttcactatcaagaagttctttagaaagaaatacaaaagag-ttacaagaa 182  Q
    ||||||| | ||||||||||||||| ||| ||||||||||   | | || | |||||||||  ||||  ||| ||||| |||||||| || |||||||||    
T  13938298 ccagttcagcccaacaatgacctacatctgggggagagagatctctccaatccactatcaatgagtttcttacaaagagatacaaaaaaggttacaagaa 13938199  T
Q  183 attagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaaga 254  Q
    ||||  ||  ||||| ||||||||||| |||||||||| || ||||||  ||||||||| ||| ||||||||    
T  13938198 attatattttacaagttctccaagaac-aacctaatttctacccatttcccaatctcttcccacgaacaaga 13938128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 20762759 - 20762646
Alignment:
Q  158 aagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt--tcaatctctttccatgaacaagac 255  Q
    |||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || || ||||  ||||||||   | ||||||||||     
T  20762759 aagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttttctcaatctc-accaatgaacaagat 20762661  T
Q  256 actcaatgattttca 270  Q
    |||||||||||||||    
T  20762660 actcaatgattttca 20762646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 28223481 - 28223614
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||||||||| ||   |||| ||| | |||||| || |||||||  ||    
T  28223481 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcagaaagatcaaccataatttctacccattttccca 28223579  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  28223580 atctc-accaatgaacaagacactcaatgattttca 28223614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 37879007 - 37879054
Alignment:
Q  173 gttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||||||||||||||||||||| | |||||||| ||||||||    
T  37879007 gttacaagaaattagcttcaacaagctcacaaagaacaaccctaattt 37879054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 47255567 - 47255634
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggt 341  Q
    |||||||||| ||||||||||||||||||| |||  |||||||||  |||||||| ||||||||||||    
T  47255567 tagaatctaacccccaaaagagaaccaacccttagtctttgatttcactaaggatcttctcttttggt 47255634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 40122284 - 40122354
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc 233  Q
    ||||||| |||||| ||||||||||||| ||||||||| | ||||||||| |||||||  | |||||||||    
T  40122284 atacaaatgagttataagaaattagcttaaacaagctcacaaagaacaaatctaatttcgacccatttttc 40122354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 47115265 - 47115196
Alignment:
Q  152 tttagaaagaaatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||| ||||| |||||||| | |||||||||||||||||| ||||||||| | |||||||| ||||||||    
T  47115265 tttacaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaattt 47115196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 270
Target Start/End: Complemental strand, 6398756 - 6398621
Alignment:
Q  134 ttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc 233  Q
    |||||||||||  ||||  ||| ||||| |||| ||||||  | ||| ||||| | |||| ||| ||||||||||||| |||||||| ||  |||||  |    
T  6398756 ttcactatcaatgagtttcttacaaagatatactaaagagaaaaaagtaattaacctcaataagttctccaagaacaa-cctaatttctactcatttccc 6398658  T
Q  234 aatctctttccatgaacaagacactcaatgattttca 270  Q
    |||||||| |||||||||||| |||||  ||||||||    
T  6398657 aatctcttcccatgaacaagaaactcacagattttca 6398621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 398
Target Start/End: Original strand, 9109653 - 9109753
Alignment:
Q  299 ccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-gactctcatttgatgtgtttccaaac 397  Q
    ||||||||||  ||||||||  || | ||| |||| ||||| | ||| |||||||  |||||||||||||||| |||||||||||||||||| ||| |||    
T  9109653 ccaaccattagtctttgattacctcatgatcttctattttgatttcccaagactcatccaaattgctcacaaaagactctcatttgatgtgtctcccaac 9109752  T
Q  398 c 398  Q
    |    
T  9109753 c 9109753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 16455703 - 16455597
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | ||||||||||||||||||||||||||||  | |||| ||| ||||||| |  |||||||  |||||||   | |||||||||||||||||    
T  16455703 atacaaatgggttacaagaaattagcttcaacaagctc-actagaaaaaatctaatttctcaccattttaccaatctc-accaatgaacaagacactcaa 16455606  T
Q  262 tgattttca 270  Q
    |||||||||    
T  16455605 tgattttca 16455597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 32471569 - 32471486
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||  ||||  ||| ||||| ||||||||||||| ||| |||||| ||||||| || |||| |||||||||||||||||    
T  32471569 cactatcaatgagtttcttacaaagagatacaaaagagttgcaataaattaacttcaac-agttctcaaagaacaaacctaattt 32471486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 13316432 - 13316495
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| ||||||||    
T  13316432 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaattt 13316495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 267
Target Start/End: Complemental strand, 33776006 - 33775887
Alignment:
Q  148 gttctttagaaagaaat-acaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc--aatctctttcc 244  Q
    |||||||| ||||| || |||||||| |||||| ||||||||||||| ||| ||||||||| ||| |||||||| ||| ||||||||  ||| || ||||    
T  33776006 gttctttacaaagagattacaaaaga-ttacaaaaaattagcttcaagaagttctccaagagcaatcctaatttctat-catttttctgaatatc-ttcc 33775910  T
Q  245 atgaacaagacactcaatgattt 267  Q
     ||| ||||| ||||||||||||    
T  33775909 gtgaccaagagactcaatgattt 33775887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 270
Target Start/End: Original strand, 44650238 - 44650356
Alignment:
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc-taatttttatccatttttcaatctctttccatgaac 250  Q
    |||| ||||| ||| |||||| |||||| |||||||| | ||||| ||| | ||||||||||| |||||||||    ||| |||||||| | | ||||||    
T  44650238 tttacaaagagatataaaagatttacaataaattagcgttaacaaactcacaaagaacaaaccataatttttacatttttctcaatctc-tccaatgaac 44650336  T
Q  251 aagacactcaatgattttca 270  Q
    |||||||||||| |||||||    
T  44650337 aagacactcaataattttca 44650356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 270
Target Start/End: Original strand, 50167250 - 50167368
Alignment:
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaac 250  Q
    |||| ||||| ||||||| | ||||||||||||||||||  |||||||| | || ||||| |||||||| ||   |||||  |||||||   | ||||||    
T  50167250 tttacaaagagatacaaatgggttacaagaaattagctttgacaagctcacaaataacaaccctaatttctactaattttcccaatctc-accaatgaac 50167348  T
Q  251 aagacactcaatgattttca 270  Q
    ||||||||||||||||||||    
T  50167349 aagacactcaatgattttca 50167368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 5460013 - 5459956
Alignment:
Q  137 actatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaaca 195  Q
    ||||||||  ||||||||| ||||||||| ||||  |||||||||||||||||||||||    
T  5460013 actatcaatgagttctttacaaagaaatataaaat-gttacaagaaattagcttcaaca 5459956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 43342389 - 43342431
Alignment:
Q  169 aagagttacaagaaattagcttcaacaagctctccaagaacaa 211  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||    
T  43342389 aagagttacaagaaattagattcaacaagttctctaagaacaa 43342431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 28242465 - 28242428
Alignment:
Q  85 ccagttcggtccaacaatgacctactcttggggagaga 122  Q
    |||||||||||||||||||||||||||| | |||||||    
T  28242465 ccagttcggtccaacaatgacctactctggaggagaga 28242428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 261
Target Start/End: Complemental strand, 41053378 - 41053280
Alignment:
Q  168 aaagagttacaagaaatta----gcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    |||||||||||||||||||    | || |||||||||||||||||||| |||||||| ||||  |||| | ||||||||  ||||| ||||| ||||||    
T  41053378 aaagagttacaagaaattaataagttttaacaagctctccaagaacaaccctaatttgtatcatttttatgaatctcttctcatgatcaagagactcaa 41053280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 70 - 267
Target Start/End: Original strand, 30218036 - 30218235
Alignment:
Q  70 ccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagagaggcat--tttcacttcactatcaagaagttctttagaaagaaataca 167  Q
    |||| ||||||||  | ||||| ||||||||||||| |||||| |||||| ||   ||  |||||   |||||||||  | || |||| ||||| |||||    
T  30218036 ccaaaaaatgtttaccgagttcagtccaacaatgacttactctgggggagtgattgatcttttcaacccactatcaatgaattatttacaaagagataca 30218135  T
Q  168 aaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattt 267  Q
    |||  ||||||||||||||||||||| ||||||||||||||||||||||| || || |||||| |||||||| |||||||||||||||||||||||||||    
T  30218136 aaatggttacaagaaattagcttcaataagctctccaagaacaaacctaacttctacccatttctcaatctccttccatgaacaagacactcaatgattt 30218235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 70 - 270
Target Start/End: Complemental strand, 33648348 - 33648145
Alignment:
Q  70 ccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagagaggcatttt--cacttcactatcaagaagttctttagaaagaaataca 167  Q
    |||||||||||||  |||||||||||||||||||||||||||| | |||||||   || |   || | | |||||||  ||||||||| |||||||||||    
T  33648348 ccaataaatgtttacccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccgctatcaatgagttctttacaaagaaataca 33648249  T
Q  168 aaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccatttt-tcaatctctttccatgaacaagacactcaatgat 265  Q
    |||| |||||| ||||||||||||||||||||| | ||||||||| ||||||||||| ||||||| |||||||| |  |||| |||||||||||||| ||    
T  33648248 aaagggttacaggaaattagcttcaacaagctcacaaagaacaaaccctaattttta-ccattttctcaatctcctctcatgtacaagacactcaattat 33648150  T
Q  266 tttca 270  Q
    |||||    
T  33648149 tttca 33648145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 42261542 - 42261629
Alignment:
Q  133 cttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||||||||||  ||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42261542 cttcactatcaatgagtactttacaaagatatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacttaattt 42261629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 264
Target Start/End: Complemental strand, 41454348 - 41454215
Alignment:
Q  131 cacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattt 230  Q
    ||||||||||||||  ||||||||| ||| | ||||||||||||| | |||||||||||||||||||||||| || |||||| ||||||| || ||||||    
T  41454348 cacttcactatcaatgagttctttacaaatatatacaaaagagttgctagaaattagcttcaacaagctctcaaaaaacaaatctaatttcta-ccattt 41454250  T
Q  231 ttc-aatctctttccatgaacaagacactcaatga 264  Q
    ||| ||||| ||||||||| ||||| |||||||||    
T  41454249 ttcgaatctttttccatgatcaagatactcaatga 41454215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 85 - 215
Target Start/End: Complemental strand, 24398219 - 24398087
Alignment:
Q  85 ccagttcggtccaacaatgacctactcttggggagagaggcatttt--cacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaa 182  Q
    |||||||||||||||||||||||||| | |||||||||   || |   || | || ||||||  ||||||||| ||||| ||||||||| ||||||||||    
T  24398219 ccagttcggtccaacaatgacctactatgggggagagattgatctctccaatccattatcaatgagttctttacaaagagatacaaaagggttacaagaa 24398120  T
Q  183 attagcttcaacaagctctccaagaacaaacct 215  Q
    |||||||||||||||||| | ||||||||||||    
T  24398119 attagcttcaacaagctcacaaagaacaaacct 24398087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 131 - 270
Target Start/End: Complemental strand, 41446253 - 41446113
Alignment:
Q  131 cacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattt 230  Q
    ||||||||| ||||  ||||||||| ||||| ||||||||| |||||   |||||||||||||||||||||| |||||||||| |||||| || |  |||    
T  41446253 cacttcactgtcaaccagttctttataaagagatacaaaagggttacttaaaattagcttcaacaagctctcaaagaacaaacataatttctaccttttt 41446154  T
Q  231 ttc-aatctctttccatgaacaagacactcaatgattttca 270  Q
    ||| ||||||||||| |||  ||||  ||||||||||||||    
T  41446153 ttcgaatctctttccgtgattaagaggctcaatgattttca 41446113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 17057429 - 17057562
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-a 234  Q
    |||||||||  ||||||| | ||||| ||||||| ||||||||| |||||||||||||||||||  | |||||||| |||||||| || ||||||||| |    
T  17057429 cactatcaatgagttctt-acaaagagatacaaatgagttacaaaaaattagcttcaacaagcttgcaaagaacaaccctaatttctacccatttttcca 17057527  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  17057528 atctcac-caatgaacaagacactcaatgattttca 17057562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 17085412 - 17085545
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-a 234  Q
    |||||||||  ||||||| | ||||| ||||||| ||||||||| |||||||||||||||||||  | |||||||| |||||||| || ||||||||| |    
T  17085412 cactatcaatgagttctt-acaaagagatacaaatgagttacaaaaaattagcttcaacaagcttgcaaagaacaaccctaatttctacccatttttcca 17085510  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  17085511 atctcac-caatgaacaagacactcaatgattttca 17085545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 36773670 - 36773537
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| |||||||||||||||||||||||||||||| | |||||||| |||||||| |  |||||||  ||    
T  36773670 cactatcaaagagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttattcccattttccca 36773572  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  36773571 atctc-accaatgaacaagacactcaatgattttca 36773537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 1631959 - 1632085
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 372  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||| ||||    
T  1631959 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaag 1632058  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  1632059 actctccactcatgtgtttcccaaccc 1632085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 275 - 399
Target Start/End: Complemental strand, 45726870 - 45726744
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 372  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  | ||||| ||||| ||||||||||| |    
T  45726870 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacatgactcacccaagttgctcacaaatg 45726771  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | ||||||||||||||||    
T  45726770 actctccactcatgtgtttccaaaccc 45726744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 393
Target Start/End: Original strand, 42261875 - 42261956
Alignment:
Q  312 tttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtgtttcc 393  Q
    |||||||| |||| ||||| ||||||||||||| |||||||||||||| ||||||| ||| |||||| ||||||||||||||    
T  42261875 tttgatttcctaatgatatactcttttggtctcgtaagactcgcccaagttgctcataaaaactctcctttgatgtgtttcc 42261956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 147 - 270
Target Start/End: Original strand, 7597081 - 7597205
Alignment:
Q  147 agttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccatttttcaatctctttcca 245  Q
    ||||||||| ||| | |||||||||| |||||||||||||| ||| ||||| ||   | ||||||| |||||||| ||| ||||| |||||||||| |||    
T  7597081 agttctttacaaaaagatacaaaagacttacaagaaattagtttcgacaagttcataaggaacaaaacctaatttctattcatttctcaatctcttccca 7597180  T
Q  246 tgaacaagacactcaatgattttca 270  Q
    ||||||||||||| | |||||||||    
T  7597181 tgaacaagacactgagtgattttca 7597205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 2334478 - 2334611
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||||||||||| ||||||||||||||||||| || | |||||||| ||| |||| || |||||||  ||    
T  2334478 cactatcaatgagttctt-acaaagagatacaaaagagttactagaaattagcttcaacaagttcacaaagaacaacccttatttctacccattttccca 2334576  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  2334577 atctc-accaatgaacaagacactcaatgattttca 2334611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 36318069 - 36318202
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-a 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||| ||||||| |||||||||||| | |||||||| |||||||| || ||||||||| |    
T  36318069 cactatcaatgagttctt-acaaagagatacaaatgggttacaataaattagtttcaacaagctcacaaagaacaaccctaatttctacccatttttcca 36318167  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  36318168 atctcac-caatgaacaagacactcaatgattttca 36318202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 4503212 - 4503326
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt---caatctctttccatgaacaag 253  Q
    ||||| ||||||||||||||||||||||||||||  ||||| || | |||||||| |||||||| || ||||||||   ||||||| | | |||||||||    
T  4503212 aaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaaccctaatttcta-ccattttttcccaatctc-tccaatgaacaag 4503309  T
Q  254 acactcaatgattttca 270  Q
    |||||||||||||||||    
T  4503310 acactcaatgattttca 4503326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 42288337 - 42288463
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 372  Q
    |||||||||| ||| ||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||| ||||    
T  42288337 tagaatctaaacccgaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaag 42288436  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  42288437 actctccactcatgtgtttcccaaccc 42288463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 723830 - 723937
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatcca-tttttcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | |||||||||||||||||| ||||||||| | ||||||||||||||||| || ||| |||| |||||||     |||||||||||||||||    
T  723830 atacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacccagttttccaatctc-acaaatgaacaagacactcaa 723928  T
Q  262 tgattttca 270  Q
    |||||||||    
T  723929 tgattttca 723937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 11690583 - 11690476
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | |||||||||||||||||| ||||||||| | ||||||||||||||||| || |||||||  |||||||     |||||||||||||||||    
T  11690583 atacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacccattttcccaatctc-acaaatgaacaagacactcaa 11690485  T
Q  262 tgattttca 270  Q
    |||||||||    
T  11690484 tgattttca 11690476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 36205744 - 36205857
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt--caatctctttccatgaacaaga 254  Q
    ||||| ||||||||||||||||||||||||||||  ||||| || | |||||||| |||||||| || ||||||||  |||||||   | ||||||||||    
T  36205744 aaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaaccctaatttcta-ccatttttcccaatctc-accaatgaacaaga 36205841  T
Q  255 cactcaatgattttca 270  Q
    ||||||||||||||||    
T  36205842 cactcaatgattttca 36205857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 42362434 - 42362327
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | |||||||||||||||||| ||||||||| | ||||||||||||||||| || |||||||  |||||||     |||||||||||||||||    
T  42362434 atacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacccattttcccaatctc-acaaatgaacaagacactcaa 42362336  T
Q  262 tgattttca 270  Q
    |||||||||    
T  42362335 tgattttca 42362327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 45099843 - 45099729
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt--caatctctttccatgaacaaga 254  Q
    ||||| ||||||||||||||||||||||||||||  ||||| || | |||||||| |||||||| || || |||||  |||||||   | ||||||||||    
T  45099843 aaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttttcccaatctc-accaatgaacaaga 45099745  T
Q  255 cactcaatgattttca 270  Q
    ||||||||||||||||    
T  45099744 cactcaatgattttca 45099729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 1631792 - 1631924
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-a 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||| |||||||||||||||||| | |||||||| |||||||| || ||||||||| |    
T  1631792 cactatcaatgagttctt-acaaagagatacaaatgggttacaagatattagcttcaacaagctcacaaagaacaatcctaatttctacccatttttcca 1631890  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||| ||||||||||    
T  1631891 atctcac-caatgaacaagacactc-atgattttca 1631924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 129 - 247
Target Start/End: Original strand, 34811274 - 34811393
Alignment:
Q  129 ttcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccat 228  Q
    |||| |||||||||||  ||||  ||| ||||| ||| ||||||||||||| |||||||||||||||||||||| |||| ||| | |||||| || |  |    
T  34811274 ttcatttcactatcaatgagtttcttacaaagagatataaaagagttacaataaattagcttcaacaagctctctaagagcaatcttaatttctaccatt 34811373  T
Q  229 ttttc-aatctctttccatg 247  Q
    ||||| ||||||||||||||    
T  34811374 ttttcaaatctctttccatg 34811393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 152 - 267
Target Start/End: Original strand, 42019948 - 42020063
Alignment:
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaaca 251  Q
    |||| ||||| ||||||||||||||||||||||||||||| ||||||| |  |||||||||| ||| || || || ||||  |||||||| ||| ||| |    
T  42019948 tttacaaagagatacaaaagagttacaagaaattagcttctacaagctttataagaacaaacataaattctaccctttttctaatctcttcccaagaaaa 42020047  T
Q  252 agacactcaatgattt 267  Q
    | | ||||||||||||    
T  42020048 atagactcaatgattt 42020063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 5723316 - 5723448
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 235  Q
    |||||||||  ||||||| | ||||| ||||||||  ||||||||||||||||||  ||||| || | |||||||| |||||||| || || ||| ||||    
T  5723316 cactatcaatgagttctt-acaaagagatacaaaaaggttacaagaaattagctttgacaagttcacaaagaacaagcctaatttctacccttttctcaa 5723414  T
Q  236 tctctttccatgaacaagacactcaatgattttca 270  Q
    ||||   | ||||||||||||||||||||||||||    
T  5723415 tctc-accaatgaacaagacactcaatgattttca 5723448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 163 - 272
Target Start/End: Original strand, 33162536 - 33162645
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-aatctctttccatgaacaagacactcaa 261  Q
    ||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||| || ||||||| | ||| ||   | ||||||||||||||| |    
T  33162536 atacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcctaatttc-accaatgaacaagacactcga 33162634  T
Q  262 tgattttcaat 272  Q
    |||||||||||    
T  33162635 tgattttcaat 33162645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 34139867 - 34139964
Alignment:
Q  173 gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 270  Q
    |||||||||||||||||| ||||||||| | |||||||| |||||||| || ||||||| ||||||||     ||||||||||||||||||||||||||    
T  34139867 gttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctacccattttctcaatctc-acaaatgaacaagacactcaatgattttca 34139964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 35447111 - 35447237
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 372  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  ||||| || |||||||||||| |   ||||||| ||||| |||||||| ||||    
T  35447111 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagtatcttctcttttggttttacaagactcacccaagttgctcacaaaag 35447210  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  35447211 actctccactcatgtgtttcccaaccc 35447237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 38312328 - 38312215
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagac 255  Q
    ||||| ||||||| | ||||||||||||||| ||||||||| || | |||||||| |||||||| || |||||||  |||||||   | |||||||||||    
T  38312328 aaagagatacaaatgggttacaagaaattagtttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctc-accaatgaacaagac 38312230  T
Q  256 actcaatgattttca 270  Q
    |||||||||||||||    
T  38312229 actcaatgattttca 38312215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 12123562 - 12123777
Alignment:
Q  54 aagataaacaaacactccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagagaggcattttcacttcactatcaagaagttctt 153  Q
    |||| |||||||||| |||| |||| |||   |||||||||||||||||||| |||||| | | | ||||   | |   |||||||||||   |||||||    
T  12123562 aagagaaacaaacacgccaagaaatatttactcagttcggtccaacaatgacttactctggagaaaagagatttctctgcttcactatcattgagttctt 12123661  T
Q  154 tagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaag 253  Q
    || |||   |||||||||||||||||||||| |||||||||||  ||   ||||||||  ||||||| ||  |||||| ||||||| |   |||||||||    
T  12123662 tacaaaatgatacaaaagagttacaagaaataagcttcaacaaaatcataaagaacaactctaatttatactcattttccaatctc-tcaaatgaacaag 12123760  T
Q  254 acactcaatgattttca 270  Q
    |||||| ||||||||||    
T  12123761 acactcgatgattttca 12123777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 14633912 - 14634019
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | |||||||||||||||||| ||||||||| | |||||||| |||||||| || |||||||  |||||||     |||||||||||||||||    
T  14633912 atacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaatcctaatttctacccattttaccaatctc-acaaatgaacaagacactcaa 14634010  T
Q  262 tgattttca 270  Q
    |||||||||    
T  14634011 tgattttca 14634019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 29867977 - 29867844
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||  ||||| || | |||||||| |||||||| || |||||||  ||    
T  29867977 cactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccattttccca 29867879  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  29867878 atctc-accaatgaacaagacactcaatgattttca 29867844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 36988136 - 36988269
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt-ca 234  Q
    |||||||||  ||||||| | ||||| ||||||||||||||||||||||||| ||  |||||||| |  ||||||| |||||||| || || ||||| ||    
T  36988136 cactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagttttgacaagctcacatagaacaaccctaatttctacccttttttcca 36988234  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    ||| |   | ||||||||||||||||||||||||||    
T  36988235 atc-ccaccaatgaacaagacactcaatgattttca 36988269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 7815353 - 7815395
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagct 199  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  7815353 aaagagatacaaaagagttacaagaaattagcttcaacaagct 7815395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 17450655 - 17450566
Alignment:
Q  181 aaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-aatctctttccatgaacaagacactcaatgattttca 270  Q
    |||||||||||||||||||| | |||||||| |||||| | || ||||||||| ||||||   | ||||||||||||||||||||||||||    
T  17450655 aaattagcttcaacaagctcacaaagaacaagcctaatctctacccatttttcaaatctc-accaatgaacaagacactcaatgattttca 17450566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 270
Target Start/End: Complemental strand, 24885742 - 24885636
Alignment:
Q  164 tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatg 263  Q
    |||||| | |||||||||||||||||| ||||||||| | ||||||||||||||||| ||  |||||| | |  | |    |||||||||||||||||||    
T  24885742 tacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctactcattttcccaattttacaaatgaacaagacactcaatg 24885643  T
Q  264 attttca 270  Q
    |||||||    
T  24885642 attttca 24885636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 42288190 - 42288264
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    ||||||||||||| | ||||||| |||||||||||||||||||| | |||||||| | |||||| || |||||||    
T  42288190 aaagaaatacaaatgggttacaataaattagcttcaacaagctcacaaagaacaaccttaatttctacccatttt 42288264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 270
Target Start/End: Original strand, 17490235 - 17490335
Alignment:
Q  164 tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatg 263  Q
    ||||||||||||||||||||||||||||||||||||| | ||||| ||    ||||| || ||||||| |||||||   | |||||||||||| ||||||    
T  17490235 tacaaaagagttacaagaaattagcttcaacaagctcacaaagaataa----aatttcta-ccattttccaatctc-aacaatgaacaagacattcaatg 17490328  T
Q  264 attttca 270  Q
    |||||||    
T  17490329 attttca 17490335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 26353266 - 26353189
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc-taatttttatccatttttcaatctc 239  Q
    ||||||||| |||||||||||||||||||||||| ||| | ||||||||||| |||||| ||  | ||||||||||||    
T  26353266 atacaaaagtgttacaagaaattagcttcaacaaactcacaaagaacaaaccttaatttctacacttttttcaatctc 26353189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 259
Target Start/End: Complemental strand, 36271744 - 36271651
Alignment:
Q  167 aaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctcttt-ccatgaacaagacactc 259  Q
    ||||| ||||||||| |||| |||||||||||| ||||| || ||||||||||||||  ||||| ||||| | ||| |||||||||||| ||||    
T  36271744 aaaagggttacaagatattaacttcaacaagctttccaataaaaaacctaatttttactcatttctcaatttttttcccatgaacaagagactc 36271651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 371
Target Start/End: Complemental strand, 43731076 - 43730992
Alignment:
Q  286 ccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| |||||||| |||  ||||||||| ||| ||||||||| ||||||| ||| |||| || |||||||||||||||||    
T  43731076 ccccaaaaga-aaccaacctttagactttgatttcctacggatattctattttggtttcccaagattcacccaaattgctcacaaa 43730992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 6595066 - 6595149
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||  ||||||| | ||||| || |||||| ||||||||||||||||||||||||| || | |||||||| ||||||||    
T  6595066 cactatcaacgagttctt-acaaagagattcaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaattt 6595149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 11151677 - 11151745
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    ||||||| | |||||||||||||||||| ||||||||| | ||||||||| ||||||| || |||||||    
T  11151677 atacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaatctaatttctacccatttt 11151745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 14202499 - 14202559
Alignment:
Q  171 gagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||||||||||||| ||||||||| | |||||||||| |||||| || |||||||    
T  14202499 gagttacaagaaattagcttaaacaagctcacaaagaacaaacataatttctacccatttt 14202559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 275 - 370
Target Start/End: Complemental strand, 17450531 - 17450436
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaa 370  Q
    ||||||| || |||||| |||||| ||||| ||| |||||||||| |||| ||| |||||||||||| ||  ||||||| ||||| || |||||||    
T  17450531 tagaatccaacccccaatagagaatcaacccttagcctttgatttcctaatgatcttctcttttggtttcacaagactcacccaagtttctcacaa 17450436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 45727037 - 45726943
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| |||||||   |||||||||||||||||||||||||||| | ||||||||  ||||||| || |||||||    
T  45727037 cactatcaatgagttctt-acaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaactctaatttctacccatttt 45726943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 3897072 - 3897010
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatc 225  Q
    ||||||||||||||||| |||||||||||||| || ||| ||||||||| | |||||| ||||    
T  3897072 atacaaaagagttacaaaaaattagcttcaacgagttcttcaagaacaatcttaatttctatc 3897010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 4484390 - 4484474
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||  |||||||   ||||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| ||||||||    
T  4484390 cactatcaatgagttcttacaaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaattt 4484474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 24397962 - 24397902
Alignment:
Q  311 ctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||| |||||||||||||||||||||||| ||  ||||||  ||||||||| |||||||    
T  24397962 ctttgactttctaaggatattctcttttggtttcacaagactaacccaaattggtcacaaa 24397902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 35214308 - 35214268
Alignment:
Q  180 gaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  35214308 gaaattagcttcagcaagctctccaagagcaaacctaattt 35214268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 35446944 - 35447027
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||| ||||||||| || | |||||||| ||||||||    
T  35446944 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagattcaacaagatcacaaagaacaaccctaattt 35447027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 270
Target Start/End: Complemental strand, 13121841 - 13121744
Alignment:
Q  173 gttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccatttt-tcaatctctttccatgaacaagacactcaatgattttca 270  Q
    |||||||||||||| ||||||||||||| | ||||||||| |||||||| || |||||||  || ||||   | ||||||||||||||||||||||||||    
T  13121841 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-ccattttcccagtctc-accaatgaacaagacactcaatgattttca 13121744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 30833454 - 30833323
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 235  Q
    |||||||||  |||||||   ||||| ||||||||| |||||||||||||| |||  ||||| || | |||||||| |||||||| || || ||| ||      
T  30833454 cactatcaatgagttcttacaaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaaccctaatttctacccttttctccc 30833355  T
Q  236 tctctttccatgaacaagacactcaatgattt 267  Q
      |||  ||| |||||||||||||||||||||    
T  30833354 aatctcaccaagaacaagacactcaatgattt 30833323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 32289651 - 32289588
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||| ||||||||||||||||||||||||| ||  ||||| || | |||||||| ||||||||    
T  32289651 aaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaaccctaattt 32289588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 11067393 - 11067280
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt-caatctctttccatgaacaagac 255  Q
    ||||| ||||||| | ||||||||||||||||||  |||||||| | ||| ||||  ||||||| || |||||||| |||| ||   | ||||| |||||    
T  11067393 aaagagatacaaatgggttacaagaaattagctttgacaagctcacaaagtacaacactaatttctacccatttttccaatttc-accaatgaataagac 11067295  T
Q  256 actcaatgattttca 270  Q
    |||||||||||||||    
T  11067294 actcaatgattttca 11067280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 399
Target Start/End: Original strand, 30218269 - 30218386
Alignment:
Q  281 ctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcat 380  Q
    |||| |||||||||||||||||   ||| | |||||||| ||||||||   | |||||||| ||  ||||||| | ||| ||||||||||||| |||| |    
T  30218269 ctaacccccaaaagagaaccaatatttagcttttgatttcctaaggatcccc-cttttggtttcgcaagactcactcaagttgctcacaaagattctcct 30218367  T
Q  381 ttgatgtgtttccaaaccc 399  Q
    ||| ||||||||| |||||    
T  30218368 ttggtgtgtttcccaaccc 30218386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 219
Target Start/End: Original strand, 36282968 - 36283060
Alignment:
Q  129 ttcacttcactatcaagaagttctttagaaagaaa--tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 219  Q
    ||||||||||||||||  |||||||||  || | |  || |||||||||||||||||||| |||||||||  | | ||||||||| |||||||    
T  36282968 ttcacttcactatcaaagagttctttactaatatagataaaaaagagttacaagaaattaacttcaacaaattattcaagaacaatcctaatt 36283060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 2869711 - 2869639
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaac--aaacctaatttttatccatttttcaa 235  Q
    ||||||| ||||||||||||||||||||  | |||||| | ||||||  ||||||||||| || |||||||||||    
T  2869711 atacaaaggagttacaagaaattagctt--aaaagctcacaaagaacaaaaacctaatttctacccatttttcaa 2869639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 4561181 - 4561137
Alignment:
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaa 196  Q
    |||| ||||| ||||||||  ||||||||||||||||||||||||    
T  4561181 tttacaaagagatacaaaaatgttacaagaaattagcttcaacaa 4561137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 7451206 - 7451166
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaag 197  Q
    ||||| ||||||| || ||||||||||||||||||||||||    
T  7451206 aaagagatacaaatgaattacaagaaattagcttcaacaag 7451166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 64; Significance: 7e-28; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 490377 - 490464
Alignment:
Q  133 cttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||||||||||  ||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  490377 cttcactatcaatgagtactttacaaagatatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacttaattt 490464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 393
Target Start/End: Original strand, 490710 - 490791
Alignment:
Q  312 tttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtgtttcc 393  Q
    |||||||| |||| ||||| ||||||||||||| |||||||||||||| ||||||| ||| |||||| ||||||||||||||    
T  490710 tttgatttcctaatgatatactcttttggtctcgtaagactcgcccaagttgctcataaaaactctcctttgatgtgtttcc 490791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 434641 - 434507
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt--tc 233  Q
    |||||||||  ||||||| | ||||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || || ||||   |    
T  434641 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccctttttcccc 434543  T
Q  234 aatctctttccatgaacaagacactcaatgattttca 270  Q
    ||||||   | ||||||||||||||||||||||||||    
T  434542 aatctc-accaatgaacaagacactcaatgattttca 434507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 54 - 267
Target Start/End: Original strand, 27418 - 27634
Alignment:
Q  54 aagataaacaaacactccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagagaggcatttt--cacttcactatcaagaagttc 151  Q
    |||| ||| ||||||  ||||||||||||  | | |||||||||||||||||||||| | |||||||||   || |   || | ||||||||| |||||     
T  27418 aagagaaataaacacatcaataaatgtttacctaattcggtccaacaatgacctactatgggggagagattgatctctccaatccactatcaataagtta 27517  T
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaa-acctaatttttatccatttttcaatctctttccatgaac 250  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||| || |||||| ||  | |||  ||||||||| ||  ||||    
T  27518 tttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcttcaagaacaatacataatttctactcttttcacaatctcttccctagaac 27617  T
Q  251 aagacactcaatgattt 267  Q
    |||| |||||| |||||    
T  27618 aagagactcaaagattt 27634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 275 - 372
Target Start/End: Original strand, 603307 - 603405
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaag 372  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| ||||||||||||    
T  603307 tagaatctaacccccaaaagagaaccaaccattagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaag 603405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 25073677 - 25073546
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 235  Q
    |||||||||  ||||||||| | ||| ||||||||| ||||||| ||| |||||| ||||||||| | ||||| ||| ||||||| || |  ||||||||    
T  25073677 cactatcaatgagttctttacatagagatacaaaagggttacaataaaatagctttaacaagctcacgaagaataaatctaatttctaccattttttcaa 25073578  T
Q  236 tctctttccatgaacaagacactcaatgattt 267  Q
    |||| | |||||||||||| ||||||||||||    
T  25073577 tctcctcccatgaacaagatactcaatgattt 25073546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 28137468 - 28137601
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 235  Q
    |||||||||  ||||||| | ||||||||||||| | |||||||||||||||||| ||||||||| | |||||||| |||||||| || ||||||| | |    
T  28137468 cactatcaatgagttctt-acaaagaaatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctacccattttccca 28137566  T
Q  236 tctctttcc-atgaacaagacactcaatgattttca 270  Q
    | |||  || ||||||||||||||||||||||||||    
T  28137567 t-tctcaccaatgaacaagacactcaatgattttca 28137601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 5740052 - 5740162
Alignment:
Q  131 cacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattt 230  Q
    ||||||| |||||  |||||||||| |||||||||||||||  |||||| ||||| | |||||||||||||| || | |||||||| ||| |||||||||    
T  5740052 cacttcattatcagtaagttctttacaaagaaatacaaaaggtttacaataaattggtttcaacaagctctctaaaagcaaacctagtttctatccattt 5740151  T
Q  231 ttcaatctctt 241  Q
    | |||||||||    
T  5740152 tccaatctctt 5740162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 371
Target Start/End: Original strand, 26830351 - 26830448
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  ||||| || |||||||||||| ||  ||||||||||||| |||||||||||    
T  26830351 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagaatcttctcttttggtttcacaagactcgcccaagttgctcacaaa 26830448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 2972999 - 2973093
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||||||||||||||||| | ||||||||||||||||| || |||||||    
T  2972999 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctacccatttt 2973093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 5043715 - 5043652
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||    
T  5043715 aaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaacctaattt 5043652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 9183091 - 9183224
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||||||||  || | |||||||| |||||||| || ||||||| |||    
T  9183091 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaacaaccctaatttctacccattttctca 9183189  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  9183190 atctc-accaatgaacaagacactcaatgattttca 9183224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 2973166 - 2973292
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 372  Q
    |||||||||||||| ||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| ||| ||||||| |    
T  2973166 tagaatctaatccctaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgttcacaaatg 2973265  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    |||||   || |||||||||| |||||    
T  2973266 actctgcattcatgtgtttcccaaccc 2973292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 399
Target Start/End: Complemental strand, 5043568 - 5043442
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 372  Q
    |||||||||| ||||||||||||||||||  ||| |||||||||   |||||||| |||||||||||| ||  ||||||| |||||||||||||| ||||    
T  5043568 tagaatctaacccccaaaagagaaccaactcttagcctttgattccactaaggatcttctcttttggtttcacaagactcacccaaattgctcacaaaag 5043469  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  5043468 actctccactcatgtgtttcccaaccc 5043442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 260
Target Start/End: Complemental strand, 17763072 - 17762975
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactca 260  Q
    ||||||| |||||||||||||||||||||||||||||| | |||||||| |||||||| || ||||||| ||||||||   | ||||||||||||||||    
T  17763072 atacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttctcaatctc-accaatgaacaagacactca 17762975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 26954346 - 26954478
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 235  Q
    |||||||||  ||||||| | ||||| ||||| | |||||||||||||||||||||||||||||| | |||||||| |||||||| || | ||||  |||    
T  26954346 cactatcaatgagttctt-acaaagagatacagatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttataccaatttcccaa 26954444  T
Q  236 tctctttccatgaacaagacactcaatgattttca 270  Q
    ||||     ||||||||||||||||||||||||||    
T  26954445 tctc-acatatgaacaagacactcaatgattttca 26954478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 149 - 267
Target Start/End: Complemental strand, 186810 - 186691
Alignment:
Q  149 ttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc--aatctctttccat 246  Q
    ||||||| ||||| ||||||||||| || || || ||| |||||||||||||||||||||||||||| |||| || |||||||||  | ||||||||| |    
T  186810 ttctttacaaagagatacaaaagagctataaaaatttaacttcaacaagctctccaagaacaaaccttatttcta-ccatttttccgattctctttccgt 186712  T
Q  247 gaacaagacactcaatgattt 267  Q
    || ||||| |||| |||||||    
T  186711 gaccaagagactcgatgattt 186691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 367
Target Start/End: Complemental strand, 21593605 - 21593514
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctca 367  Q
    |||||||||| ||||||||||||||||||| ||| | |||||||| |||||||| |||||||||||| ||  ||||||| ||||| |||||||    
T  21593605 tagaatctaacccccaaaagagaaccaacccttagc-tttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctca 21593514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 17758131 - 17758037
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||    
T  17758131 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttt 17758037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 21589039 - 21588945
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||    
T  21589039 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttt 21588945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 21593772 - 21593678
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||    
T  21593772 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttt 21593678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 26830183 - 26830316
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt-ca 234  Q
    |||||||||  ||||||| | ||||| ||||||| |  ||||||||||||||||||||||||||| | ||||||||  ||||||| || |||||||| ||    
T  26830183 cactatcaatgagttctt-acaaagagatacaaatggattacaagaaattagcttcaacaagctcacaaagaacaactctaatttctacccatttttcca 26830281  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||| ||||||||||    
T  26830282 atctcacccaatgaacaagacactc-atgattttca 26830316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 399
Target Start/End: Complemental strand, 17762930 - 17762804
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 372  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| ||||||||| || ||  ||||||| ||||| |||||| | ||||    
T  17762930 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctctttttgtttcacaagactcacccaagttgctcccaaaag 17762831  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  17762830 actctccactcatgtgtttcccaaccc 17762804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 27106178 - 27106239
Alignment:
Q  164 tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatc 225  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||| || |||||||||||    
T  27106178 tacaaaagagttacaagaaattagcttcaacaatctcttcaacaacacacttaatttttatc 27106239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 27147984 - 27148045
Alignment:
Q  164 tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatc 225  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||| || |||||||||||    
T  27147984 tacaaaagagttacaagaaattagcttcaacaatctcttcaacaacacacttaatttttatc 27148045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 30834616 - 30834730
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt--caatctctttccatgaacaaga 254  Q
    ||||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || || |||||  |||||||   | ||||||||||    
T  30834616 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttttcccaatctc-accaatgaacaaga 30834714  T
Q  255 cactcaatgattttca 270  Q
    ||||||||||||||||    
T  30834715 cactcaatgattttca 30834730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 5406260 - 5406392
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || |||||||  ||    
T  5406260 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttcta-ccattttccca 5406357  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  5406358 atctc-accaatgaacaagacactcaatgattttca 5406392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 5410585 - 5410717
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || |||||||  ||    
T  5410585 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttcta-ccattttccca 5410682  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  5410683 atctc-accaatgaacaagacactcaatgattttca 5410717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 31404735 - 31404867
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || |||||||  ||    
T  31404735 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttcta-ccattttccca 31404832  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||  |  ||||||||||||||||||||||||||    
T  31404833 atctcact-gatgaacaagacactcaatgattttca 31404867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 3808936 - 3809061
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 372  Q
    |||||||||| |||||||| |||||||||| ||| ||||||||||  |||||||| |||||||||||| |   ||||||| ||||| ||||||||||| |    
T  3808936 tagaatctaacccccaaaa-agaaccaacccttagcctttgatttcactaaggattttctcttttggttttacaagactcacccaagttgctcacaaatg 3809034  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  3809035 actctccactcatgtgtttcccaaccc 3809061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 5413454 - 5413586
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 235  Q
    |||||||||  ||||||| | ||||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || |  |||  |||    
T  5413454 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcgcaaagaacaaccctaatttctacctttttcccaa 5413552  T
Q  236 tctctttccatgaacaagacactcaatgattttca 270  Q
    ||||   | ||||||||||||||||||||||||||    
T  5413553 tctc-accaatgaacaagacactcaatgattttca 5413586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 603096 - 603222
Alignment:
Q  85 ccagttcggtccaacaatgacctactcttggggagagaggcatttt--cacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaa 182  Q
    |||||||||||||||  ||||||| |||||||||||||   ||||   || | |||||||||  ||||||| | ||||| ||||||| | ||||||||||    
T  603096 ccagttcggtccaact-tgacctaatcttggggagagattgatttctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaa 603193  T
Q  183 attagcttcaacaagctctccaagaacaa 211  Q
    |||||||||||||||||| | ||||||||    
T  603194 attagcttcaacaagctcacaaagaacaa 603222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 12221158 - 12221247
Alignment:
Q  131 cacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||||||| ||||  | ||||||| ||||  ||||||||||||||||| ||||||| |||||| |  ||| ||||||||||||||||||    
T  12221158 cacttcactgtcaattaattctttacaaagtgatacaaaagagttacaaaaaattagtttcaacgaattcttcaagaacaaacctaattt 12221247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 4045532 - 4045398
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttttatccatttt-tc 233  Q
    |||||||||  |||| |||| ||||| ||| ||||   |||||||||||||||||||||||||||   ||||||||| |||||||| || |||||||  |    
T  4045532 cactatcaatgagttatttacaaagagatataaaatgattacaagaaattagcttcaacaagctcataaagaacaaaccctaatttcta-ccattttccc 4045434  T
Q  234 aatctctttccatgaacaagacactcaatgattttca 270  Q
    |||||| | | || |||||||||||||||||||||||    
T  4045433 aatctc-tccaataaacaagacactcaatgattttca 4045398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 22424923 - 22424983
Alignment:
Q  173 gttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc 233  Q
    |||||||||||||||||| ||||||||| | |||||||| |||||||| || |||||||||    
T  22424923 gttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctacccatttttc 22424983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 22425065 - 22425119
Alignment:
Q  286 ccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggt 341  Q
    ||||||||||||||||||| ||| | |||||||| |||||||||||||||||||||    
T  22425065 ccccaaaagagaaccaacccttagc-tttgatttcctaaggatattctcttttggt 22425119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 3038983 - 3039096
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagac 255  Q
    ||||| ||||||| | ||||||||||||||||||||| |||||| | | |||||| |||||||| || | |||||  |||||||   | |||||||||||    
T  3038983 aaagagatacaaatgggttacaagaaattagcttcaaaaagctcacaatgaacaaccctaatttctaccaattttcccaatctc-accaatgaacaagac 3039081  T
Q  256 actcaatgattttca 270  Q
    | |||||||||||||    
T  3039082 attcaatgattttca 3039096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 371
Target Start/End: Original strand, 5741016 - 5741114
Alignment:
Q  273 tttagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||||| |||| |||   |||||||| ||| |||||||||| |||||||| ||| ||||| || ||  |||| || |||||||||||||||||    
T  5741016 tttagaatctaaccccccaaaagtaaccaacccttagcctttgatttactaaggatcttcactttttgtttctcaagattcacccaaattgctcacaaa 5741114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 373
Target Start/End: Complemental strand, 11660546 - 11660450
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaaga 373  Q
    |||||||||| ||||||||  ||||||||| ||| ||||||| || ||| || ||| |||||||||||||| |||| ||  ||||||||||||||||||    
T  11660546 tagaatctaa-ccccaaaat-gaaccaacccttagcctttgaattcctatggttatcctcttttggtctcccaagattcatccaaattgctcacaaaga 11660450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 3808768 - 3808852
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaa-gagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||||||||  ||||||| | ||||| |||||||| | ||||||||||||||| |||||||||||| | |||||||| ||||||||    
T  3808768 cactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaccctaattt 3808852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 14563808 - 14563756
Alignment:
Q  168 aaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||||||||||||||| || ||||| || |||||||||||||||| ||||||    
T  14563808 aaagagttacaagaaataagtttcaataaactctccaagaacaaacataattt 14563756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 16569106 - 16569038
Alignment:
Q  173 gttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatccatttt-tcaatctc 239  Q
    |||||||||||||||||| ||||||||| | |||||| ||||||||||| || ||||||| ||||||||    
T  16569106 gttacaagaaattagcttaaacaagctcacaaagaacaaaacctaatttctacccattttctcaatctc 16569038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 403
Target Start/End: Complemental strand, 25073076 - 25072996
Alignment:
Q  323 aaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtgtttccaaaccctatg 403  Q
    |||||| |||||||||||| ||| |||||    |||| || | || |||||||||| ||||||||||||||||||||||||    
T  25073076 aaggatcttctcttttggtttcccaagacctatccaagtttcacataaagactctcctttgatgtgtttccaaaccctatg 25072996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 26800763 - 26800711
Alignment:
Q  70 ccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagaga 122  Q
    |||| |||||||  ||||||||||||||||||||||||||||| | |||||||    
T  26800763 ccaagaaatgttcatccagttcggtccaacaatgacctactctggaggagaga 26800711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 33160432 - 33160495
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||| ||||||||||||||||||||||||||||  ||||| || | ||||||||  |||||||    
T  33160432 aaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaactctaattt 33160495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 4641134 - 4641089
Alignment:
Q  78 tgtttgtccagttcggtccaacaatgacctactcttggggagagag 123  Q
    ||||| ||||||||||||||| ||||||||||||| | ||||||||    
T  4641134 tgtttatccagttcggtccaataatgacctactctagaggagagag 4641089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 6097528 - 6097596
Alignment:
Q  164 tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc 233  Q
    |||||||||||||||||||||||| ||  ||||| || | |||||||| |||||||| || |||||||||    
T  6097528 tacaaaagagttacaagaaattagatttgacaagttcacaaagaacaatcctaatttcta-ccatttttc 6097596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 2908567 - 2908499
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctcca 204  Q
    |||||||||  ||||||||| ||  | |||||||||||||  || |||||| |||||||||||||||||    
T  2908567 cactatcaatgagttctttacaataagatacaaaagagttgtaaaaaattatcttcaacaagctctcca 2908499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 26800660 - 26800632
Alignment:
Q  172 agttacaagaaattagcttcaacaagctc 200  Q
    |||||||||||||||||||||||||||||    
T  26800660 agttacaagaaattagcttcaacaagctc 26800632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 7269 - 7172
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  7269 tagaatctaacccccaaaagagaaccaacccttagcctttgattttactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 7172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 7435 - 7303
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-a 234  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||||||||||||||||| | |||||||| | |||||| || ||||||||| |    
T  7435 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccttaatttctacccatttttcca 7337  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||| ||||||||||    
T  7336 atctcac-caatgaacaagacactc-atgattttca 7303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 312 - 392
Target Start/End: Original strand, 1671 - 1751
Alignment:
Q  312 tttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtgtttc 392  Q
    |||||||| |||||||| |||||||||| ||||| ||||||||||||| |||||||||| ||||||||| |||||||||||    
T  1671 tttgatttcctaaggatcttctcttttgatctcccaagactcgcccaagttgctcacaatgactctcatatgatgtgtttc 1751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 92 - 267
Target Start/End: Original strand, 1411 - 1585
Alignment:
Q  92 ggtccaacaatgacctactcttggggagagaggcattttcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttc 191  Q
    ||||||||||||||||||||||||| ||||||   | | | ||| ||||| ||  |||||||||   ||| | ||||||| ||| ||| |||| | ||||    
T  1411 ggtccaacaatgacctactcttggg-agagagatctctcctcttgactattaatgagttctttatgcagagaaacaaaagggttgcaaaaaatcaacttc 1509  T
Q  192 aacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgattt 267  Q
    | ||||||| || ||||||||||||||||||| | ||||  ||||||||| |||||||||||  ||||||| ||||    
T  1510 accaagctcacccagaacaaacctaatttttaccaatttcacaatctcttcccatgaacaagtaactcaattattt 1585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 296 - 376
Target Start/End: Original strand, 23794074 - 23794154
Alignment:
Q  296 gaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactc 376  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||||||| || || || ||||||||||||||||||||||    
T  23794074 gaaccaaccattagcctttgattttctaaggatctcctcttttggtctcttacgattcacccaaattgctcacaaagactc 23794154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 43363526 - 43363617
Alignment:
Q  131 cacttcactatcaagaagttctttagaaa--gaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||||||||||||  |||| |||| |||  || ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  43363526 cacttcactatcaatgagttatttacaaatagagatacaaaagagttacaataaattagtttcaacaagctctccaagaacaaacctaattt 43363617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 30024792 - 30024925
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||||||||||||||||| | | |||||| |||||||| || ||||||| |||    
T  30024792 cactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaacaaccctaatttctacccattttctca 30024890  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  30024891 atctc-accaatgaacaagacactcaatgattttca 30024925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 47674003 - 47674136
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||| || ||||||| |||    
T  47674003 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttctca 47674101  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  47674102 atctc-accaatgaacaagacactcaatgattttca 47674136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 1113745 - 1113632
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagac 255  Q
    ||||| ||||||| | |||| ||||||||||||||||||||||| | |||||||| |||||||| |||||||||| ||||||||     |||||||||||    
T  1113745 aaagagatacaaatgggttataagaaattagcttcaacaagctcacaaagaacaaccctaatttctatccattttctcaatctc-acaaatgaacaagac 1113647  T
Q  256 actcaatgattttca 270  Q
    |||||||||||||||    
T  1113646 actcaatgattttca 1113632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 2390223 - 2390126
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  2390223 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 2390126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 85 - 267
Target Start/End: Original strand, 3904624 - 3904808
Alignment:
Q  85 ccagttcggtccaacaatgacctactcttggggagagaggcattt-tcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaa 183  Q
    ||||||||||||||||||||||||||||  ||||||||   || | ||   ||||||||||  ||||||||| ||||| || |||||| |||||||||||    
T  3904624 ccagttcggtccaacaatgacctactctgagggagagattgatctctctgatcactatcaatgagttctttacaaagagatgcaaaagtgttacaagaaa 3904723  T
Q  184 ttagcttcaacaagctctccaagaac-aaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaatgattt 267  Q
    |||  ||||| | |||||| |||||| ||||||||||| || |||||||  ||||||||| | | |||||||| ||||||||||||    
T  3904724 ttacattcaataggctctcaaagaacaaaacctaatttcta-ccattttcccaatctcttcctaagaacaagagactcaatgattt 3904808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 134 - 267
Target Start/End: Complemental strand, 5116715 - 5116582
Alignment:
Q  134 ttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc 233  Q
    |||||||||||  ||||||||| ||||| |||||||||  |||||| |||||| ||||||||| || |||||||||||||||||||| ||  | |||       
T  5116715 ttcactatcaatgagttctttacaaagagatacaaaaggtttacaataaattatcttcaacaaactatccaagaacaaacctaatttctactcttttcct 5116616  T
Q  234 aatctctttccatgaacaagacactcaatgattt 267  Q
    |||||| | |||| ||||||| ||||||||||||    
T  5116615 aatctcctcccataaacaagagactcaatgattt 5116582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 371
Target Start/End: Original strand, 34310943 - 34311040
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  34310943 tagaatctaacccccaaaagagaaccaacctttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 34311040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 167 - 267
Target Start/End: Original strand, 1360243 - 1360343
Alignment:
Q  167 aaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacactcaatgatt 266  Q
    ||||| ||||||||||||| ||||||||||| |||||||||  ||||||||||| || |  |||  ||||||| |||||||||||||| |||||||||||    
T  1360243 aaaagggttacaagaaattcgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatt 1360342  T
Q  267 t 267  Q
    |    
T  1360343 t 1360343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 2361032 - 2361126
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| |||||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||    
T  2361032 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttt 2361126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 26417424 - 26417291
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||| ||||||||||||| | |||||||| |||||||| || |||||||  ||    
T  26417424 cactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattatcttcaacaagctcacaaagaacaaccctaatttctacccattttccca 26417326  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  26417325 atctc-accaatgaacaagacactcaatgattttca 26417291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 27347925 - 27347792
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||| || |||||||  ||    
T  27347925 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaatcctaatttctacccattttccca 27347827  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  27347826 atctc-accaatgaacaagacactcaatgattttca 27347792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 29608845 - 29608751
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| |||||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||    
T  29608845 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttt 29608751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 48491687 - 48491554
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||||  ||||| ||||||| | ||||||||||||||||||||||||| || | |||||||| |||||||| || |||||||  ||    
T  48491687 cactatcaatgagttctttc-aaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttccca 48491589  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  48491588 atctc-accaatgaacaagacactcaatgattttca 48491554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 2361199 - 2361324
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 372  Q
    |||||||||| || |||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| || |||||||| ||||| |||||||| ||||    
T  2361199 tagaatctaa-cctcaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcataagactcacccaagttgctcacaaaag 2361297  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  2361298 actctccactcatgtgtttcccaaccc 2361324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 4512617 - 4512743
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 372  Q
    |||||| ||| |||||||||||||| |||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| ||||||||||| |    
T  4512617 tagaatataacccccaaaagagaactaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatg 4512716  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | ||||||||||||||||    
T  4512717 actctccactcatgtgtttccaaaccc 4512743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 22328397 - 22328527
Alignment:
Q  85 ccagttcggtccaacaatgacctactcttggggagagaggcattt-tcacttc-actatcaagaagttctttagaaagaaatacaaaagagttacaagaa 182  Q
    |||||||||||||||||||||||||||| |||||||||   || | |||  || ||||| ||  | ||| ||  ||||| ||||||||||||||||||||    
T  22328397 ccagttcggtccaacaatgacctactctaggggagagattgatctctcaaatccactattaatgacttccttgcaaagagatacaaaagagttacaagaa 22328496  T
Q  183 attagcttcaacaagctctccaagaacaaac 213  Q
    |||||||||||||||||| | ||||||||||    
T  22328497 attagcttcaacaagctcacaaagaacaaac 22328527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 31733049 - 31733162
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagac 255  Q
    ||||| ||||||| | |||||||||||||||||||| ||||||| | |||||||| |||||||| || ||||||| ||| ||||   | |||||||||||    
T  31733049 aaagagatacaaatgggttacaagaaattagcttcaccaagctcacaaagaacaaccctaatttctacccattttctcagtctc-accaatgaacaagac 31733147  T
Q  256 actcaatgattttca 270  Q
    |||||||||||||||    
T  31733148 actcaatgattttca 31733162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 48599414 - 48599488
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||    
T  48599414 aaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttt 48599488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 275 - 371
Target Start/End: Original strand, 6360139 - 6360236
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||| | ||  ||||||| ||||| |||||||||||    
T  6360139 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaa 6360236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 29991145 - 29991029
Alignment:
Q  153 ttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaa 252  Q
    ||||||||| ||||||||| ||||||||||||||||||  ||||| || | || ||||| |||||||| ||||| |||  |||||||   | ||||||||    
T  29991145 ttagaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaataacaaccctaatttctatccttttcccaatctc-accaatgaacaa 29991047  T
Q  253 gacactcaatgattttca 270  Q
    ||||||||||||||||||    
T  29991046 gacactcaatgattttca 29991029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 275 - 371
Target Start/End: Original strand, 48599561 - 48599658
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||| ||| ||||||||||||||||||| ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  48599561 tagaatataacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 48599658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 2390370 - 2390294
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc 233  Q
    ||||| ||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||||    
T  2390370 aaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttttc 2390294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 6432079 - 6431985
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||    
T  6432079 cactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaatcctaatttctacccatttt 6431985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 22270081 - 22269987
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||||||||||||||||| | |||||||| |||||||| || |||||||    
T  22270081 cactatcaatcagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttt 22269987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 164 - 270
Target Start/End: Complemental strand, 23555121 - 23555014
Alignment:
Q  164 tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt---caatctctttccatgaacaagacactca 260  Q
    |||||||| ||||||||||||||||||||||||| || | |||||||| |||||||| || ||||||||   |||||||   | ||||||||||||||||    
T  23555121 tacaaaagtgttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttcta-ccattttttcccaatctc-accaatgaacaagacactca 23555024  T
Q  261 atgattttca 270  Q
    ||||||||||    
T  23555023 atgattttca 23555014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 152 - 270
Target Start/End: Complemental strand, 43864337 - 43864219
Alignment:
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-aatctctttccatgaac 250  Q
    |||| ||||| ||||||| | |||||| |||||||||||||||||| || | |||||||| |||||||| || ||| ||||| ||||||   | ||||||    
T  43864337 tttacaaagagatacaaatgggttacaggaaattagcttcaacaagttcacaaagaacaaccctaatttctacccacttttccaatctcac-caatgaac 43864239  T
Q  251 aagacactcaatgattttca 270  Q
    ||||||||||||||||||||    
T  43864238 aagacactcaatgattttca 43864219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 163 - 268
Target Start/End: Complemental strand, 26639402 - 26639297
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||||| |||||||||||||| | ||||||| ||||||||||||| ||||||||| || |||||||  ||||||||| |||  || |||| ||||||    
T  26639402 atacaaaagggttacaagaaattaacatcaacaaactctccaagaacatacctaatttcta-ccattttcacaatctcttcccaaaaagaagagactcaa 26639304  T
Q  262 tgatttt 268  Q
    |||||||    
T  26639303 tgatttt 26639297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 399
Target Start/End: Complemental strand, 29608677 - 29608551
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 372  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  ||||| || |||| ||||||| ||  ||||||| ||||| |||||||| ||||    
T  29608677 tagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagaatcttctattttggtttcacaagactcacccaagttgctcacaaaag 29608578  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  29608577 actctccactcatgtgtttcccaaccc 29608551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 31518883 - 31518770
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagac 255  Q
    ||||| ||||||| ||||||||||||| ||||||||| |||||| | ||||||||||||||||| || | |||||  |||||||   | |||||||||||    
T  31518883 aaagagatacaaatgagttacaagaaactagcttcaataagctcacaaagaacaaacctaatttctacctattttcccaatctc-accaatgaacaagac 31518785  T
Q  256 actcaatgattttca 270  Q
    |||| ||||||||||    
T  31518784 actcgatgattttca 31518770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 47676216 - 47676329
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagac 255  Q
    ||||| ||||||| | ||||||||||||||||||||||||  || | |||||||| |||||||| || ||||||| ||||||||   | |||||||||||    
T  47676216 aaagagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaacaaccctaatttctacccattttctcaatctc-accaatgaacaagac 47676314  T
Q  256 actcaatgattttca 270  Q
    ||||| |||||||||    
T  47676315 actcattgattttca 47676329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 371
Target Start/End: Complemental strand, 6431912 - 6431815
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa 371  Q
    |||||||||| || |||||||||||||||| ||| | ||||||||  |||||||| |||||||||||| ||  ||||||| ||||| |||||||||||    
T  6431912 tagaatctaaccctcaaaagagaaccaacccttagcatttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaa 6431815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 23565121 - 23565205
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaa-acctaattt 220  Q
    |||||||||  ||||||| | ||||| ||||||||||||||||||||||||| |||||||||||| | |||||||| |||||||||    
T  23565121 cactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagtttcaacaagctcacaaagaacaagacctaattt 23565205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 31105479 - 31105586
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | |||||||||||||||||||||||||||| | ||||| ||| ||||||| || |||||||  |||||||     |||||||||||||||||    
T  31105479 atacaaatgggttacaagaaattagcttcaacaagctcacaaagaaaaaatctaatttctacccattttcccaatctc-acaaatgaacaagacactcaa 31105577  T
Q  262 tgattttca 270  Q
    |||||||||    
T  31105578 tgattttca 31105586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 36574575 - 36574651
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa 212  Q
    |||||||||  ||||||||| ||||| ||| ||||| |||||||||||||||||||||||| ||| | |||||||||    
T  36574575 cactatcaatgagttctttacaaagagatataaaagggttacaagaaattagcttcaacaaactcacaaagaacaaa 36574651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 391
Target Start/End: Original strand, 1360371 - 1360497
Alignment:
Q  265 ttttcaattttagaatctaatcccc-aaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattg 363  Q
    ||||||| | |||||||||| |||| ||||||||||||| |  ||||||||||||| | ||  ||||||||||||||| | | ||||||| | ||| |||    
T  1360371 ttttcaactctagaatctaaccccccaaaagagaaccaatccatatcctttgatttcccaaaaatattctcttttggttttccaagactcactcaagttg 1360470  T
Q  364 ctcacaaagactctcatttgatgtgttt 391  Q
    ||| |||| |||||| ||||||||||||    
T  1360471 ctcgcaaa-actctcctttgatgtgttt 1360497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 18126752 - 18126619
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-a 234  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||||||||||||||| |||||| || | |||||||| |||||||| ||  |||||||| |    
T  18126752 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttgaacaagttcacaaagaacaaccctaatttctacacatttttcca 18126654  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | |||||||| |||||||||||||||||    
T  18126653 atctcac-caatgaacaaaacactcaatgattttca 18126619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 35854022 - 35853889
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || || ||||  ||    
T  35854022 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccctttttccca 35853924  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  35853923 atctc-accaatgaacaagacactcaatgattttca 35853889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 8153430 - 8153317
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagac 255  Q
    ||||| ||||||| ||||||||||||||||||||  |||| ||| | |||||||| |||||||| ||  ||||||  |||||||   | |||||||||||    
T  8153430 aaagagatacaaatgagttacaagaaattagctttgacaatctcacaaagaacaaccctaatttctactcattttcccaatctc-accaatgaacaagac 8153332  T
Q  256 actcaatgattttca 270  Q
    |||||||||||||||    
T  8153331 actcaatgattttca 8153317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 403
Target Start/End: Original strand, 22328637 - 22328755
Alignment:
Q  286 ccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-gactctcatttga 384  Q
    ||||||||||||||||||| ||| | |||||||   ||||||||||||||||| || ||| |||| || ||||| ||||||||||| |||||||   | |    
T  22328637 ccccaaaagagaaccaacccttagcttttgattacataaggatattctcttttagtttcccaagattcacccaagttgctcacaaatgactctctactca 22328736  T
Q  385 tgtgtttccaaaccctatg 403  Q
    ||| ||||| |||||||||    
T  22328737 tgtttttcccaaccctatg 22328755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 48489519 - 48489445
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    ||||| ||||||| | ||||||||||||||||||||||||| | || |||||||| |||||||| || |||||||    
T  48489519 aaagagatacaaatgggttacaagaaattagcttcaacaagttttcaaagaacaaccctaatttctacccatttt 48489445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 267
Target Start/End: Complemental strand, 40808774 - 40808567
Alignment:
Q  59 aaacaaacactccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagagag-gcattttcacttcactatcaagaagttctttaga 157  Q
    |||||||||| |||| |||| |||   |||||||||||||||||||| |||||| |||||||| |  || |||   |||||||||||  | ||||||| |    
T  40808774 aaacaaacacaccaaaaaatatttactcagttcggtccaacaatgacatactctaggggagagtgatcacttt-gtttcactatcaacgaattctttaca 40808676  T
Q  158 aagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagacac 257  Q
    |||| ||||||||  || || || |||||||||||||||| ||| |||||| ||  ||||||| ||   ||||| | ||||||| ||||||||||||  |    
T  40808675 aagagatacaaaatggtaacgag-aattagcttcaacaagttcttcaagaaaaagtctaatttatactgattttccgatctcttcccatgaacaagaggc 40808577  T
Q  258 tcaatgattt 267  Q
     |||||||||    
T  40808576 gcaatgattt 40808567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 4586269 - 4586139
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||| ||| | ||||||| ||||||||||||||||| || | |||||||| |||||||| || |||||||  ||    
T  4586269 cactatcaatgagttctt-acaaagagataaaaatgggttacaaaaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttccca 4586171  T
Q  235 atctctttccatgaacaagacactcaatgattt 267  Q
    |||||   | |||||||||||||||||||||||    
T  4586170 atctc-accaatgaacaagacactcaatgattt 4586139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 12097945 - 12098052
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaa 261  Q
    ||||||| | |||||||||||||| ||||||||||||| | | |||||| |||||||| || |||||||  ||||||    | |||||||||||||||||    
T  12097945 atacaaatgggttacaagaaattaacttcaacaagctcacaatgaacaaccctaatttctacccattttcccaatct-aaccaatgaacaagacactcaa 12098043  T
Q  262 tgattttca 270  Q
    |||||||||    
T  12098044 tgattttca 12098052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 36146468 - 36146601
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaac-ctaatttttatccatttt-tc 233  Q
    |||||||||  ||||||| | ||||| ||||||| | |||||| ||||||||||||||||||||| | || ||||||| ||||||| || |||||||  |    
T  36146468 cactatcaatgagttctt-acaaagagatacaaatgggttaca-gaaattagcttcaacaagctcacaaataacaaactctaatttctacccattttccc 36146565  T
Q  234 aatctctttccatgaacaagacactcaatgattttca 270  Q
    ||||||   | ||||||||||||||||||||||||||    
T  36146566 aatctc-accaatgaacaagacactcaatgattttca 36146601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 41649097 - 41649203
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt-caatctctttccatgaacaagacactcaa 261  Q
    ||||||| | |||||||||||||||||  ||||||||| | ||||||||||||||||| || | |||||| |||||||     |||||||||||||||||    
T  41649097 atacaaatgggttacaagaaattagcta-aacaagctcacaaagaacaaacctaatttctaccaatttttccaatctc-acaaatgaacaagacactcaa 41649194  T
Q  262 tgattttca 270  Q
    |||||||||    
T  41649195 tgattttca 41649203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 392
Target Start/End: Original strand, 43363683 - 43363759
Alignment:
Q  316 attttctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtgtttc 392  Q
    |||| |||| ||| |||||||||||||||  |||| || |||||||||||||||| ||||||||| | |||||||||    
T  43363683 atttcctaaagatcttctcttttggtctctcaagattcacccaaattgctcacaaggactctcatctcatgtgtttc 43363759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 496043 - 496137
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | ||| |||||||||||||||||||||||| | |||||| | |||||||| || |||||||    
T  496043 cactatcaatgagttctt-ataaagagatacaaatgggttgcaagaaattagcttcaacaagctcacaaagaactaccctaatttctacccatttt 496137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 2759257 - 2759339
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatt 219  Q
    |||||||||  ||||||| | ||||| ||| ||| ||||||||||||||||||||||||||| || | |||||||| |||||||    
T  2759257 cactatcaatgagttctt-acaaagagatataaatgagttacaagaaattagcttcaacaagttcacaaagaacaaccctaatt 2759339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 4253599 - 4253666
Alignment:
Q  147 agttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacc 214  Q
    ||||||||  ||||| ||| ||||| |||||| ||||||||||||||||||||| | |||||||||||    
T  4253599 agttctttccaaagagatataaaagggttacatgaaattagcttcaacaagctcacaaagaacaaacc 4253666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 4508786 - 4508849
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||| ||||||| | ||||||||||||||||||||| |||||| | |||||||| ||||||||    
T  4508786 aaagagatacaaatgggttacaagaaattagcttcaataagctcacaaagaacaaccctaattt 4508849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 14069893 - 14070026
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||  ||||| || | |||||||| |||||||| || || ||||  ||    
T  14069893 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccctttttccca 14069991  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  14069992 atctc-accaatgaacaagacactcaatgattttca 14070026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 14379921 - 14380054
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||  ||||| || | |||||||| |||||||| || || ||||  ||    
T  14379921 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccctttttccca 14380019  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  14380020 atctc-accaatgaacaagacactcaatgattttca 14380054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 266
Target Start/End: Complemental strand, 19502286 - 19502156
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 235  Q
    |||||||||  ||||||| | ||||| ||||||||||||||||||||||||||||  |||||||| | || ||||| | |||||| || || ||||||      
T  19502286 cactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagctttgacaagctcacaaaaaacaaccttaatttctaaccttttttcgc 19502188  T
Q  236 tctctttcca-tgaacaagacactcaatgatt 266  Q
      |||  ||| |||||||||||||||||||||    
T  19502187 aatctcaccactgaacaagacactcaatgatt 19502156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 27073927 - 27073868
Alignment:
Q  134 ttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaa 193  Q
    |||||| ||||  ||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  27073927 ttcactgtcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaa 27073868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 27204386 - 27204445
Alignment:
Q  134 ttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaa 193  Q
    |||||| ||||  ||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  27204386 ttcactgtcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaa 27204445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 3258935 - 3258846
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattttctaaggatattctcttttggtctcctaagactcgcccaaattgct 365  Q
    |||||||||| ||||||| ||||||||||| |||   |||||||| |||||||| |||||||||||| ||  ||||||| ||||| |||||    
T  3258935 tagaatctaacccccaaatgagaaccaacccttagg-tttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgct 3258846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 4510775 - 4510901
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 372  Q
    |||||||||| ||  ||||||||||||| | ||| ||||||||||  |||||||| |||||||||||| ||  ||||||| || || ||||||||||| |    
T  4510775 tagaatctaacccataaaagagaaccaatcgttagcctttgatttcactaaggatcttctcttttggtttcacaagactcaccaaagttgctcacaaatg 4510874  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  4510875 actctccactcatgtgtttcccaaccc 4510901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 8359323 - 8359471
Alignment:
Q  85 ccagttcggtccaacaatgacctactcttggggagaga--ggcattttcacttcactatcaagaagttctttagaaagaaatacaaaa-gagttacaaga 181  Q
    |||||||||||||||||||||||||||| | |||||||  |   | | || | |||||||||  ||||| ||| ||||| |||||||| | |||||||||    
T  8359323 ccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaatgggttacaaga 8359421  T
Q  182 aattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||| || ||||||||| | ||||| || |||||||| || |||||||    
T  8359422 aattagtttaaacaagctcacaaagaaaaaccctaatttctacccatttt 8359471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 23344063 - 23344005
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacct 215  Q
    ||||| |||| |||| |||||||||||||||||||||||||||| | ||||| ||||||    
T  23344063 aaagatatactaaagggttacaagaaattagcttcaacaagctcacaaagaataaacct 23344005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 270
Target Start/End: Original strand, 24525985 - 24526090
Alignment:
Q  166 caaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaatttttatccatttt-tcaatctctttccatgaacaagacactcaatg 263  Q
    |||| ||||||||||||||||||||  |||||||| | |||||| ||||||||||| || |||||||  |||| ||   | |||||||||||||||||||    
T  24525985 caaatgagttacaagaaattagctttgacaagctcacaaagaacaaaacctaatttctacccattttcccaatttc-accaatgaacaagacactcaatg 24526083  T
Q  264 attttca 270  Q
    |||||||    
T  24526084 attttca 24526090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 31519094 - 31519027
Alignment:
Q  54 aagataaacaaacactccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagagag 123  Q
    |||| |||||||||| |||| |||||||| ||||||||||||||||  |||||||||| |||||||||||    
T  31519094 aagagaaacaaacacaccaagaaatgtttatccagttcggtccaac-ttgacctactc-tggggagagag 31519027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 6360032 - 6360080
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaa 205  Q
    ||||| ||||||| | |||||||||||||||||||||||||||| ||||    
T  6360032 aaagagatacaaatgggttacaagaaattagcttcaacaagctcaccaa 6360080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 25615935 - 25615867
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    ||||||| | |||||||||||||||||| ||||||| | |  |||||||||||||||| || |||||||    
T  25615935 atacaaatgggttacaagaaattagcttaaacaagcgcacatagaacaaacctaatttctacccatttt 25615867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 32358114 - 32358177
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctc 200  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||||||||||||    
T  32358114 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctc 32358177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 34310802 - 34310870
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    ||||||| | ||||||||||||||||||||||||  || | |||||||| |||||||| || |||||||    
T  34310802 atacaaatgtgttacaagaaattagcttcaacaatttcacaaagaacaaccctaatttctacccatttt 34310870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 4510608 - 4510702
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||||| || ||| | |||||||| | |||||| || |||||||    
T  4510608 cactatcaatgagttctt-ataaagagatacaaatgggttacaagaaattagcttcaataaactcacaaagaacaaccttaatttctacccatttt 4510702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 4512450 - 4512544
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    |||||||||  ||||||| | ||||| ||||||| | ||||||||||||||||||||| || ||| | |||||||| | |||||| || |||||||    
T  4512450 cactatcaatgagttctt-ataaagagatacaaatgggttacaagaaattagcttcaataaactcacaaagaacaaccttaatttctacccatttt 4512544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 270
Target Start/End: Original strand, 4538627 - 4538733
Alignment:
Q  164 tacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttc-aatctctttccatgaacaagacactcaat 262  Q
    |||||| | |||||||||||||||||| || ||  ||   |||||||| |||||||| || ||||||||| ||||||   | ||||||||||||||||||    
T  4538627 tacaaatgggttacaagaaattagcttaaaaaatttcataaagaacaaccctaatttctacccatttttccaatctcac-caatgaacaagacactcaat 4538725  T
Q  263 gattttca 270  Q
    ||||||||    
T  4538726 gattttca 4538733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 39731477 - 39731374
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 235  Q
    |||||||||  |||||||   ||||| ||||||||||||||||||||||||| |   ||||| || | |||||||| |||||||| || || |||| |||    
T  39731477 cactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatctgacaagttcacaaagaacaaccctaatttctaccctttttccaa 39731378  T
Q  236 tctc 239  Q
    ||||    
T  39731377 tctc 39731374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 4508933 - 4509059
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 372  Q
    |||||||||| ||  ||||||||||||| | ||| ||||||||||  |||||||| || ||||||||| ||  ||||||| || || ||||||||||| |    
T  4508933 tagaatctaacccataaaagagaaccaatccttagcctttgatttcactaaggatcttatcttttggtttcacaagactcaccaaagttgctcacaaatg 4509032  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  4509033 actctccactcatgtgtttcccaaccc 4509059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 5514113 - 5514202
Alignment:
Q  181 aaattagcttcaacaagctctccaagaacaaacc-taatttttatccatttttcaatctctttccatgaacaagacactcaatgattttca 270  Q
    |||||||||||||||||||| | ||||||||| | |||||| ||  | |||||||||||||    |||||||||| |||||||||||||||    
T  5514113 aaattagcttcaacaagctcacaaagaacaaaacataatttctactcttttttcaatctctcaa-atgaacaagaaactcaatgattttca 5514202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 9432446 - 9432504
Alignment:
Q  127 ttttcacttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattag 187  Q
    |||||| ||||||||||| |||||||||| ||||| ||  | |||||||||||||||||||    
T  9432446 ttttcaattcactatcaaaaagttctttacaaagagat--ataagagttacaagaaattag 9432504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 359
Target Start/End: Complemental strand, 22269914 - 22269829
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgattt-tctaaggatattctcttttggtctcctaagactcgcccaa 359  Q
    |||||||||| |||||||||||||||||||  || ||| ||||||  |||||||| |||| ||||||| ||  ||||||| |||||    
T  22269914 tagaatctaacccccaaaagagaaccaacccatagcctatgatttcactaaggatcttctattttggtttcacaagactcacccaa 22269829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 350
Target Start/End: Original strand, 22552683 - 22552736
Alignment:
Q  297 aaccaaccattatcctttgattttctaaggatattctcttttggtctcctaaga 350  Q
    |||||||| |||||||||||||| ||| | || |||||||||||||||| ||||    
T  22552683 aaccaacccttatcctttgatttcctatgaatcttctcttttggtctcccaaga 22552736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 18396413 - 18396342
Alignment:
Q  149 ttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaac-aaacctaattt 220  Q
    ||||||| ||||| ||||||||  ||||||| ||| ||| |||||||| |||||||||||| |||||||||||    
T  18396413 ttctttataaagagatacaaaat-gttacaaaaaaataggttcaacaaactctccaagaacaaaacctaattt 18396342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 31105370 - 31105437
Alignment:
Q  54 aagataaacaaacactccaataaatgtttgtccagttcggtccaacaatgacctactcttggggagaga 122  Q
    |||| |||||||||  |||| ||||||||  |||||||||||||||  ||| |||||||||||||||||    
T  31105370 aagagaaacaaacagaccaagaaatgtttacccagttcggtccaac-ttgatctactcttggggagaga 31105437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 25166 - 25086
Alignment:
Q  132 acttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa 212  Q
    |||||||||||||  ||||||||| ||||| ||||||||  |||||||||||||| ||||||||| ||||| |||||||||    
T  25166 acttcactatcaatgagttctttacaaagagatacaaaaaggttacaagaaattaccttcaacaaactctcaaagaacaaa 25086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 80510 - 80636
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcac-aaag 372  Q
    |||||||||| |||||||| |||||||||| ||| ||||||||||  |||||||| | ||||||| || ||| ||||||| ||||| |||||||| ||||    
T  80510 tagaatctaacccccaaaatagaaccaacccttagcctttgatttcactaaggatctactcttttagtttcccaagactcacccaagttgctcacaaaag 80609  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  80610 actctccgctcatgtgtttcccaaccc 80636  T

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Target: scaffold0014; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 80369 - 80437
Alignment:
Q  163 atacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt 231  Q
    ||||||| | ||| |||||||||||||||||||||||| | |||||||| |||||||| || |||||||    
T  80369 atacaaatgggttgcaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttt 80437  T

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Target: scaffold1519 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 1004 - 891
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaagaca 256  Q
    ||||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| |||||||| || || ||||||    |||  ||| ||||||||||    
T  1004 aaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttttcccaatctcaccaagaacaagaca 905  T
Q  257 ctcaatgattttca 270  Q
    ||||||||||||||    
T  904 ctcaatgattttca 891  T

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Target: scaffold0286 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 11665 - 11532
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccattttt--c 233  Q
    |||||||||  ||||||| | ||||| ||||||| ||||||||||||||||||||  ||||| || | |||||||| |||||||| || ||||||||  |    
T  11665 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagctttgacaagttcacaaagaacaaccctaatttcta-ccatttttccc 11568  T
Q  234 aatctctttccatgaacaagacactcaatgattttca 270  Q
    ||||||   | ||||||||||||||||||||||||||    
T  11567 aatctc-accaatgaacaagacactcaatgattttca 11532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 399
Target Start/End: Complemental strand, 11499 - 11373
Alignment:
Q  275 tagaatctaatccccaaaagagaaccaaccattatcctttgatttt-ctaaggatattctcttttggtctcctaagactcgcccaaattgctcacaaa-g 372  Q
    |||||||||| ||| ||||||||| ||||| ||| ||||||||||| |||| ||| |||||||||||| ||  ||||||| ||||| ||||||| ||| |    
T  11499 tagaatctaaccccaaaaagagaaacaacctttagcctttgattttactaatgatcttctcttttggtttcacaagactcacccaagttgctcagaaatg 11400  T
Q  373 actctcatttgatgtgtttccaaaccc 399  Q
    ||||||   | |||||||||| |||||    
T  11399 actctccactcatgtgtttcccaaccc 11373  T

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Target: scaffold0176 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 18078 - 18146
Alignment:
Q  152 tttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||| | | |||||| ||||||||    
T  18078 tttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaatgaacaaccctaattt 18146  T

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Target: scaffold0066 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 20495 - 20558
Alignment:
Q  157 aaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaattt 220  Q
    ||||| ||||||| | ||||||||||||||||||||||||| || | || ||||||||||||||    
T  20495 aaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaaaaacaaacctaattt 20558  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 114710 - 114577
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttt-tca 234  Q
    |||||||||  ||||||| | ||||| ||||||||| ||||||||||||||||||  ||||| || | |||||||| | |||||| || || ||||  ||    
T  114710 cactatcaatgagttctt-acaaagagatacaaaagcgttacaagaaattagctttgacaagttcacaaagaacaaccttaatttctaccctttttccca 114612  T
Q  235 atctctttccatgaacaagacactcaatgattttca 270  Q
    |||||   | ||||||||||||||||||||||||||    
T  114611 atctc-accaatgaacaagacactcaatgattttca 114577  T

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Target: scaffold0491 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 11221 - 11352
Alignment:
Q  136 cactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaacctaatttttatccatttttcaa 235  Q
    |||||||||  |||||||   ||||| ||||||||| ||||||||||||||| ||  ||||| || | |||||||| |||||||| || || ||| ||      
T  11221 cactatcaacgagttcttacaaaagagatacaaaagggttacaagaaattagattttacaagttcacaaagaacaaccctaatttctacccttttctccc 11320  T
Q  236 tctctttccatgaacaagacactcaatgattt 267  Q
      |||  ||| |||||||||||||||||||||    
T  11321 aatctcaccaagaacaagacactcaatgattt 11352  T

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Target: scaffold0477 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 6981 - 7026
Alignment:
Q  78 tgtttgtccagttcggtccaacaatgacctactcttggggagagag 123  Q
    ||||| ||||||||||||||| ||||||||||||| | ||||||||    
T  6981 tgtttatccagttcggtccaataatgacctactctagaggagagag 7026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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