View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15919_low_9 (Length: 409)

Name: NF15919_low_9
Description: NF15919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15919_low_9
NF15919_low_9
[»] chr7 (37 HSPs)
chr7 (185-288)||(18506152-18506256)
chr7 (277-393)||(18506407-18506522)
chr7 (87-163)||(19416517-19416590)
chr7 (89-128)||(36448742-36448781)
chr7 (94-163)||(7994869-7994935)
chr7 (91-163)||(27462421-27462490)
chr7 (87-163)||(31038507-31038580)
chr7 (87-157)||(5526728-5526795)
chr7 (90-163)||(16577845-16577915)
chr7 (90-163)||(16587747-16587817)
chr7 (89-157)||(9522917-9522982)
chr7 (87-163)||(10244730-10244802)
chr7 (87-163)||(18714451-18714524)
chr7 (87-163)||(21174362-21174435)
chr7 (87-163)||(26920699-26920772)
chr7 (91-159)||(27833390-27833455)
chr7 (87-157)||(40752830-40752897)
chr7 (89-163)||(43346549-43346620)
chr7 (90-163)||(3672537-3672607)
chr7 (94-163)||(37624553-37624619)
chr7 (87-125)||(47440837-47440875)
chr7 (87-159)||(5579696-5579765)
chr7 (87-163)||(6023312-6023385)
chr7 (95-163)||(8261428-8261493)
chr7 (87-163)||(10025997-10026070)
chr7 (87-163)||(19626510-19626583)
chr7 (87-132)||(21105606-21105650)
chr7 (87-163)||(21286353-21286426)
chr7 (87-163)||(23069842-23069915)
chr7 (87-128)||(26471219-26471259)
chr7 (87-128)||(26547659-26547699)
chr7 (87-163)||(40187621-40187694)
chr7 (87-163)||(46737788-46737861)
chr7 (87-159)||(46987089-46987158)
chr7 (89-164)||(7872732-7872804)
chr7 (40-76)||(18506112-18506148)
chr7 (87-131)||(42043081-42043124)
[»] chr1 (48 HSPs)
chr1 (87-159)||(3481563-3481633)
chr1 (87-163)||(42045357-42045430)
chr1 (90-163)||(34521175-34521245)
chr1 (90-150)||(43611430-43611487)
chr1 (89-163)||(8269353-8269424)
chr1 (89-163)||(3509926-3509997)
chr1 (87-164)||(14520947-14521021)
chr1 (87-163)||(17139502-17139575)
chr1 (111-163)||(23979401-23979451)
chr1 (87-163)||(27533246-27533319)
chr1 (87-163)||(32163198-32163272)
chr1 (91-163)||(39302952-39303021)
chr1 (87-163)||(42888578-42888651)
chr1 (87-127)||(33200044-33200084)
chr1 (87-131)||(40268213-40268256)
chr1 (85-163)||(29739338-29739413)
chr1 (89-163)||(49431978-49432049)
chr1 (87-133)||(17188681-17188726)
chr1 (87-159)||(24752636-24752706)
chr1 (87-152)||(25532976-25533038)
chr1 (87-129)||(41677607-41677648)
chr1 (87-132)||(2613725-2613769)
chr1 (87-163)||(5037399-5037476)
chr1 (87-163)||(5907802-5907875)
chr1 (90-131)||(7652107-7652147)
chr1 (87-163)||(7925367-7925439)
chr1 (87-132)||(8253742-8253786)
chr1 (87-163)||(9005682-9005755)
chr1 (94-163)||(14768816-14768883)
chr1 (87-163)||(19620579-19620652)
chr1 (87-132)||(28393772-28393817)
chr1 (87-163)||(32944739-32944812)
chr1 (87-132)||(34142378-34142422)
chr1 (87-163)||(40411738-40411811)
chr1 (89-161)||(43356441-43356509)
chr1 (87-132)||(43426183-43426227)
chr1 (87-163)||(45139991-45140064)
chr1 (87-147)||(48100725-48100782)
chr1 (87-127)||(11344443-11344483)
chr1 (87-127)||(11502463-11502503)
chr1 (111-150)||(15670640-15670677)
chr1 (95-123)||(16067148-16067176)
chr1 (89-133)||(17201219-17201262)
chr1 (88-163)||(18166606-18166678)
chr1 (87-162)||(38448852-38448924)
chr1 (87-131)||(39252272-39252315)
chr1 (87-131)||(41926825-41926868)
chr1 (89-163)||(52279514-52279584)
[»] chr2 (36 HSPs)
chr2 (87-161)||(27848160-27848232)
chr2 (89-163)||(24592831-24592902)
chr2 (87-163)||(10735816-10735889)
chr2 (87-163)||(22522997-22523070)
chr2 (87-163)||(29544630-29544703)
chr2 (89-163)||(4927434-4927505)
chr2 (87-160)||(9547397-9547467)
chr2 (87-163)||(2256974-2257047)
chr2 (87-163)||(6765613-6765686)
chr2 (87-163)||(9383194-9383267)
chr2 (87-154)||(5028859-5028923)
chr2 (87-131)||(43826457-43826500)
chr2 (87-130)||(8761580-8761622)
chr2 (87-133)||(15333128-15333177)
chr2 (87-157)||(44526131-44526198)
chr2 (85-163)||(44810706-44810781)
chr2 (90-163)||(25186227-25186297)
chr2 (90-163)||(32957528-32957598)
chr2 (87-132)||(4238762-4238806)
chr2 (87-132)||(10156020-10156064)
chr2 (87-163)||(12599850-12599923)
chr2 (87-163)||(19156149-19156222)
chr2 (87-163)||(19814835-19814909)
chr2 (87-163)||(20120706-20120779)
chr2 (87-163)||(20455894-20455967)
chr2 (87-163)||(20565060-20565133)
chr2 (95-163)||(25625727-25625792)
chr2 (87-163)||(27411095-27411168)
chr2 (87-163)||(31815872-31815945)
chr2 (87-163)||(33063989-33064062)
chr2 (87-159)||(35820290-35820359)
chr2 (87-131)||(10991545-10991588)
chr2 (87-131)||(15381636-15381679)
chr2 (115-162)||(29896280-29896325)
chr2 (94-157)||(41859862-41859922)
chr2 (87-162)||(42066715-42066787)
[»] chr3 (37 HSPs)
chr3 (87-164)||(22251444-22251519)
chr3 (87-163)||(25340909-25340982)
chr3 (87-163)||(29631189-29631262)
chr3 (87-163)||(38130944-38131017)
chr3 (89-163)||(25441485-25441556)
chr3 (94-163)||(334832-334899)
chr3 (87-163)||(35863798-35863871)
chr3 (76-163)||(45431940-45432024)
chr3 (89-163)||(2186412-2186483)
chr3 (87-129)||(53683472-53683514)
chr3 (87-163)||(7464476-7464549)
chr3 (95-163)||(19126662-19126727)
chr3 (87-147)||(35347296-35347354)
chr3 (87-163)||(53996302-53996375)
chr3 (87-158)||(27185480-27185548)
chr3 (87-158)||(32843252-32843320)
chr3 (85-163)||(16873786-16873862)
chr3 (87-157)||(52119379-52119446)
chr3 (94-163)||(4601854-4601920)
chr3 (87-133)||(5117211-5117256)
chr3 (87-160)||(10498683-10498753)
chr3 (87-133)||(33404231-33404276)
chr3 (87-133)||(45254234-45254279)
chr3 (87-125)||(46336529-46336567)
chr3 (78-163)||(48849748-48849829)
chr3 (78-163)||(55066585-55066667)
chr3 (87-163)||(10926472-10926545)
chr3 (87-163)||(14827528-14827601)
chr3 (87-163)||(16792959-16793032)
chr3 (87-132)||(18554732-18554777)
chr3 (115-163)||(20612262-20612308)
chr3 (90-162)||(48209197-48209266)
chr3 (87-163)||(50037314-50037387)
chr3 (90-162)||(52904130-52904198)
chr3 (87-131)||(977956-977999)
chr3 (90-145)||(35392009-35392061)
chr3 (87-158)||(48796208-48796276)
[»] chr6 (24 HSPs)
chr6 (87-163)||(14296942-14297015)
chr6 (87-163)||(10507513-10507587)
chr6 (90-164)||(24623301-24623372)
chr6 (87-157)||(5655297-5655365)
chr6 (87-163)||(655734-655807)
chr6 (96-163)||(11456361-11456424)
chr6 (87-163)||(17151239-17151312)
chr6 (87-155)||(20744141-20744206)
chr6 (87-163)||(21847197-21847270)
chr6 (87-163)||(22792925-22792998)
chr6 (87-163)||(32053791-32053864)
chr6 (87-158)||(29740485-29740553)
chr6 (87-157)||(16390432-16390499)
chr6 (87-157)||(26400867-26400934)
chr6 (89-158)||(4455586-4455652)
chr6 (94-163)||(8569719-8569785)
chr6 (90-163)||(10018406-10018475)
chr6 (87-125)||(13656271-13656309)
chr6 (87-163)||(9372341-9372413)
chr6 (87-132)||(21029380-21029425)
chr6 (87-163)||(24248168-24248241)
chr6 (87-157)||(8917602-8917670)
chr6 (87-131)||(20720796-20720839)
chr6 (87-163)||(24269886-24269960)
[»] chr5 (35 HSPs)
chr5 (87-163)||(6489010-6489083)
chr5 (87-163)||(22522786-22522859)
chr5 (87-163)||(26655467-26655540)
chr5 (87-163)||(26927052-26927125)
chr5 (89-163)||(12189997-12190067)
chr5 (87-163)||(6624779-6624852)
chr5 (87-157)||(26409256-26409323)
chr5 (87-163)||(10199022-10199095)
chr5 (87-163)||(13864347-13864420)
chr5 (87-163)||(15889414-15889487)
chr5 (76-163)||(19068425-19068508)
chr5 (87-163)||(34436854-34436927)
chr5 (87-163)||(37932333-37932406)
chr5 (87-163)||(40715934-40716007)
chr5 (87-162)||(3445233-3445305)
chr5 (87-161)||(11720897-11720967)
chr5 (87-150)||(20721053-20721113)
chr5 (95-155)||(42515818-42515876)
chr5 (89-163)||(29695020-29695091)
chr5 (89-127)||(6734763-6734801)
chr5 (87-125)||(20927642-20927679)
chr5 (87-163)||(18331710-18331783)
chr5 (87-163)||(19248482-19248555)
chr5 (87-163)||(21139134-21139207)
chr5 (91-132)||(23036721-23036761)
chr5 (87-163)||(24408498-24408571)
chr5 (78-163)||(25861932-25862011)
chr5 (87-163)||(34191436-34191509)
chr5 (87-148)||(36321493-36321552)
chr5 (87-163)||(39980511-39980584)
chr5 (87-155)||(42505875-42505945)
chr5 (87-162)||(133551-133622)
chr5 (87-131)||(16036830-16036873)
chr5 (87-158)||(30843392-30843459)
chr5 (87-162)||(32559307-32559379)
[»] chr8 (27 HSPs)
chr8 (87-162)||(32051518-32051590)
chr8 (95-163)||(12800885-12800950)
chr8 (87-163)||(27587224-27587297)
chr8 (96-163)||(12748913-12748977)
chr8 (89-163)||(37570739-37570809)
chr8 (90-163)||(6235536-6235606)
chr8 (90-163)||(19260564-19260634)
chr8 (87-163)||(3650523-3650596)
chr8 (87-163)||(19163521-19163594)
chr8 (87-158)||(7996943-7997011)
chr8 (90-157)||(8717466-8717530)
chr8 (87-163)||(10982729-10982803)
chr8 (87-158)||(17898082-17898150)
chr8 (89-163)||(6038260-6038331)
chr8 (87-163)||(444416-444489)
chr8 (87-163)||(22775631-22775704)
chr8 (91-163)||(24838155-24838224)
chr8 (87-163)||(32421572-32421644)
chr8 (89-149)||(33373751-33373808)
chr8 (87-132)||(35682706-35682750)
chr8 (95-163)||(37141368-37141433)
chr8 (87-163)||(39821887-39821959)
chr8 (87-163)||(40167325-40167398)
chr8 (87-150)||(8137938-8137998)
chr8 (88-163)||(8704505-8704576)
chr8 (96-163)||(9192212-9192276)
chr8 (87-131)||(30427734-30427777)
[»] chr4 (38 HSPs)
chr4 (90-163)||(10564450-10564520)
chr4 (90-163)||(28435233-28435303)
chr4 (87-163)||(2888876-2888950)
chr4 (87-163)||(5924652-5924725)
chr4 (87-163)||(9946430-9946503)
chr4 (87-163)||(11949748-11949821)
chr4 (87-163)||(43034327-43034400)
chr4 (87-155)||(47814244-47814309)
chr4 (87-158)||(23809952-23810020)
chr4 (87-133)||(8464088-8464133)
chr4 (87-163)||(3936630-3936703)
chr4 (87-163)||(7230283-7230356)
chr4 (87-132)||(10204843-10204887)
chr4 (87-163)||(20383491-20383564)
chr4 (87-163)||(20799379-20799452)
chr4 (91-163)||(22411771-22411840)
chr4 (89-163)||(16431621-16431692)
chr4 (89-163)||(56551577-56551648)
chr4 (87-159)||(54294411-54294482)
chr4 (90-162)||(897431-897500)
chr4 (89-157)||(4916160-4916225)
chr4 (87-132)||(14541863-14541907)
chr4 (87-163)||(19588157-19588230)
chr4 (87-163)||(23247583-23247656)
chr4 (87-163)||(23304001-23304074)
chr4 (87-163)||(24664976-24665049)
chr4 (87-163)||(35287492-35287565)
chr4 (87-132)||(36478994-36479038)
chr4 (87-132)||(38340334-38340378)
chr4 (87-163)||(38453268-38453341)
chr4 (87-163)||(54857600-54857673)
chr4 (87-163)||(56497593-56497666)
chr4 (87-131)||(2186348-2186391)
chr4 (92-163)||(9783907-9783975)
chr4 (87-158)||(12322676-12322744)
chr4 (90-157)||(16304089-16304153)
chr4 (87-131)||(51458681-51458724)
chr4 (87-131)||(52270045-52270088)
[»] scaffold0735 (1 HSPs)
scaffold0735 (87-163)||(1531-1604)
[»] scaffold0021 (1 HSPs)
scaffold0021 (87-163)||(161144-161217)
[»] scaffold0350 (1 HSPs)
scaffold0350 (89-163)||(1253-1324)
[»] scaffold0118 (1 HSPs)
scaffold0118 (87-132)||(40001-40045)
[»] scaffold0027 (1 HSPs)
scaffold0027 (87-163)||(61555-61628)
[»] scaffold0011 (1 HSPs)
scaffold0011 (87-163)||(185266-185339)


Alignment Details
Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 185 - 288
Target Start/End: Original strand, 18506152 - 18506256
Alignment:
Q  185 gtaataaaataacctatgaaaacaatagttaatcgtctcttaaagggtaagtttat-aaaacgataacaattcttaaccacattaagacggtaactaact 283  Q
    |||||||||||| ||||||||||||||||||||| ||| ||||||||||| ||||| |||| |||||||||||||||||||||||||||   ||||||||    
T  18506152 gtaataaaataatctatgaaaacaatagttaatcctcttttaaagggtaaatttataaaaatgataacaattcttaaccacattaagacatgaactaact 18506251  T
Q  284 ttctt 288  Q
    |||||    
T  18506252 ttctt 18506256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 393
Target Start/End: Original strand, 18506407 - 18506522
Alignment:
Q  277 actaactttcttaattcttgtgttttttcaaaaaagaatattatattt-agagatgaatgtagtacttgaactttgaccaaaatgaaactagataacaag 375  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||| | | |||  |||||||||||| ||||||||||||||||||||| | |    
T  18506407 actaactttcttaattcttgtgttttt-caaaaaagaatattatattttaga-acggatgcggtacttgaacttagaccaaaatgaaactagataatatg 18506504  T
Q  376 ggatctacaccgtcctat 393  Q
    ||||||||| | ||||||    
T  18506505 ggatctacatcatcctat 18506522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 19416517 - 19416590
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||||| | ||||| ||||| |||||  | ||||||||||||||||||||||||||||    
T  19416517 agcttagctcagttggtatggacaa-tgcataaaatatgcaaggt--ccggggttcaaaccccggccaccaccaaaa 19416590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 36448742 - 36448781
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaa 128  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36448742 cttagctcagttggtatggacaaatacataatatatgtaa 36448781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 7994935 - 7994869
Alignment:
Q  94 ctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||| ||||||| |||||||||||||||||| |  ||||||||||||||| ||||||||||||    
T  7994935 ctcagttggtagggacaaa-acataatatatgtaaggtct--ggggttcaaaccccgaccaccaccaaaa 7994869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 27462490 - 27462421
Alignment:
Q  91 tagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||| | ||||||||||| |||||  | ||||||||||||||||||||||| ||||    
T  27462490 tagctcagttggtatggacaa-tgcataatatatgcaaggt--ccggggttcaaaccccggccaccacaaaaa 27462421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 31038580 - 31038507
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||||| | |||| | |||| ||||| |  ||||||||||||||||||||||||||||    
T  31038580 agcttagctcagttggtatggacaa-tgcatattgtatgcaaggtct--ggggttcaaaccccggccaccaccaaaa 31038507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 5526728 - 5526795
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccacca 157  Q
    ||||||||||||||||||||||| ||| |||||||||| |||| |||  ||||||||||||||| ||||||    
T  5526728 agcttagctcagttggtatggac-aatgcataatatatataagattt--ggggttcaaaccccgaccacca 5526795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 16577915 - 16577845
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||| |||||| ||||||||||||| ||||| |  |||||||||||| |||||||||| ||||    
T  16577915 ttagctcagttggtagggacaa-tacataatatatgcaaggtct--ggggttcaaacctcggccaccacaaaaa 16577845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 16587747 - 16587817
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||| |||||| ||||||||||||| ||||| |  |||||||||||| |||||||||| ||||    
T  16587747 ttagctcagttggtagggacaa-tacataatatatgcaaggtct--ggggttcaaacctcggccaccacaaaaa 16587817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 9522917 - 9522982
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccacca 157  Q
    |||||||||||||||||| || ||| ||||||||||| |||||||  ||||||| ||||||||||||||    
T  9522917 cttagctcagttggtatgaac-aatgcataatatatgcaaggttt--ggggttcgaaccccggccacca 9522982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 10244730 - 10244802
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||  || |||||||||| |||||||||||| ||||    
T  10244730 agcttagctcagttggtatggac-aatgcataatatatgcaagg--tccggggttcaaa-cccggccaccacaaaaa 10244802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 18714451 - 18714524
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| |||| ||| ||||||||||| ||||  || |||||||||||||||  |||||||||||    
T  18714451 agcttagctcagttggtaaggac-aatgcataatatatgcaagg--tccggggttcaaaccccgtacaccaccaaaa 18714524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 21174362 - 21174435
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| ||||||  | ||| |||||| |||  ||| ||||||||||||||||||||||||||||    
T  21174362 agcttagctcagttggtagggacaatga-atactatatgaaag--ttccggggttcaaaccccggccaccaccaaaa 21174435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 26920772 - 26920699
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||  ||||| |||||||| |||||||  |||  ||||||||||||||| ||||||||||||    
T  26920772 agcttagctcagttggtaaagacaa-tacataatgtatgtaaatttt--ggggttcaaaccccgaccaccaccaaaa 26920699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 27833455 - 27833390
Alignment:
Q  91 tagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccacc 159  Q
    |||||||||||||| |||||| | |||||||||||||||||  | ||||||||||||||| ||||||||    
T  27833455 tagctcagttggtaaggacaa-tgcataatatatgtaaggt--ccggggttcaaaccccgaccaccacc 27833390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 40752897 - 40752830
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccacca 157  Q
    |||||||||||||| |||||||| ||||||||||||||| ||  | || ||||||| ||||||||||||||    
T  40752897 agcttagctcagttagtatggac-aatacataatatatgcaa--tgtccggggttcgaaccccggccacca 40752830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 43346620 - 43346549
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||| ||| |||||||||||||||   || |||| |||||||||  ||||||||||||    
T  43346620 cttagctcagttggtatggac-aatgcataatatatgtaag--atccggggatcaaaccccatccaccaccaaaa 43346549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 3672607 - 3672537
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||| ||||||||| ||||||||||||| ||| | |  |||||||||||| ||| |||||||||||    
T  3672607 ttagctcagttgatatggacaa-tacataatatatgcaagatat--ggggttcaaacctcggacaccaccaaaa 3672537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 37624553 - 37624619
Alignment:
Q  94 ctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| | ||||||||||| |||||  ||||||||| || |||||||||||| ||||    
T  37624553 ctcagttggtatggacaa-tgcataatatatgcaaggt--cgggggttcgaatcccggccaccacaaaaa 37624619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 125
Target Start/End: Complemental strand, 47440875 - 47440837
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatg 125  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  47440875 agcttagctcagttggtagggacaaatgcataatatatg 47440837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 5579696 - 5579765
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccacc 159  Q
    |||||||||||||||||| |||| | | ||||||||||| ||||  || ||||||||||||||| ||||||||    
T  5579696 agcttagctcagttggtagggac-agtgcataatatatgcaagg--tctggggttcaaaccccgaccaccacc 5579765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 6023312 - 6023385
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||| ||||||| | | ||| ||||| ||||||   ||||||||||||||| ||||||||||||    
T  6023312 agcttagctcagttggtttggacaa-tgcttaaaatatgcaaggttc--ggggttcaaaccccgaccaccaccaaaa 6023385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 8261493 - 8261428
Alignment:
Q  95 tcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||| ||||| | ||||| |||||||||||||  ||||||| || |||||||||||||||||    
T  8261493 tcagttggtatagacaa-tgcataaaatatgtaaggttt--ggggttcgaatcccggccaccaccaaaa 8261428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 10025997 - 10026070
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| |||||||||| ||||||| | ||||| ||||| ||||| |  ||||||||||||||| ||||||||||||    
T  10025997 agcttaactcagttggtttggacaa-tgcataaaatatgcaaggtat--ggggttcaaaccccgaccaccaccaaaa 10026070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 19626583 - 19626510
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| |||||||||| ||||||| | ||||||||||| |||||  | ||||||||||| |||||||| |||||||    
T  19626583 agcttaactcagttggtttggacaa-tgcataatatatgcaaggt--ccggggttcaaacaccggccactaccaaaa 19626510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 21105606 - 21105650
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtt 132  Q
    |||||||||||||||||||||| |||| ||||||||||| ||||||    
T  21105606 agcttagctcagttggtatgga-aaatgcataatatatgcaaggtt 21105650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 21286353 - 21286426
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||||  || ||||||| ||||||| || || ||||||    
T  21286353 agcttagctcaattggtatggac-aatacataatatatgcaagg--tctggggttccaaccccgcccccccccaaaa 21286426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 23069915 - 23069842
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||  |||||  |||||||||||| ||||| |  ||||||| |||||||| |||||||||||    
T  23069915 agcttagctcagttggtaaagacaac-acataatatatgcaaggtat--ggggttcgaaccccggacaccaccaaaa 23069842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 26471219 - 26471259
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaa 128  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  26471219 agcttagctcagttggtatggac-aatacataaaatatgtaa 26471259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 26547659 - 26547699
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaa 128  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  26547659 agcttagctcagttggtatggac-aatacataaaatatgtaa 26547699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 40187694 - 40187621
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| ||||||||||| |||||| | ||||||||||||||||| |  | |||||||||||||  |||||||||||    
T  40187694 agcttaactcagttggtagggacaa-tgcataatatatgtaaggtct--gcggttcaaaccccgaacaccaccaaaa 40187621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 46737788 - 46737861
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||| || ||||||| | ||||||||||| |||||  | ||||||||||| |||||||| |||||||    
T  46737788 agcttagctcagtttgtttggacaa-tgcataatatatgcaaggt--ccggggttcaaacaccggccactaccaaaa 46737861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 46987089 - 46987158
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccacc 159  Q
    |||||||||||||||||| |||| ||| ||||||||||| ||||  || ||||||| |||||||| |||||||    
T  46987089 agcttagctcagttggtaaggac-aatgcataatatatgcaagg--tccggggttcgaaccccggacaccacc 46987158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 164
Target Start/End: Complemental strand, 7872804 - 7872732
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaac 164  Q
    |||||||||||||||| |||| ||| ||||||||||| ||||  || ||||||| ||||| || ||||||||||||    
T  7872804 cttagctcagttggtaaggac-aatgcataatatatgcaagg--tctggggttcgaacccaggacaccaccaaaac 7872732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 18506112 - 18506148
Alignment:
Q  40 atcaatatatattaatgttatatacttatatccagta 76  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  18506112 atcaacatatattaatgttatatatttatatccagta 18506148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 42043124 - 42043081
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggt 131  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||    
T  42043124 agcttagctcagttggtatggac-aatgcataatatatttaaggt 42043081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 3481563 - 3481633
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccacc 159  Q
    |||||||||||||||||| |||||||| ||||||||||| ||||  || ||||||||||||||||||||||||    
T  3481563 agcttagctcagttggtagggacaaatgcataatatatgcaagg--tctggggttcaaaccccggccaccacc 3481633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 42045430 - 42045357
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||||| | ||||||||||| ||||| |  || |||||||||||||||||||||||||    
T  42045430 agcttagctcagttggtatggacaa-tgcataatatatgcaaggtct--ggagttcaaaccccggccaccaccaaaa 42045357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 34521245 - 34521175
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||||||| | ||||||||||| |||||  | |||||||||||| |||||||||||||||    
T  34521245 ttagctcagttggtatggacaa-tgcataatatatgcaaggt--ccggggttcaaacctcggccaccaccaaaa 34521175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 43611430 - 43611487
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccg 150  Q
    |||||||||||||||||||| ||||||||||||||||||||| |  |||||||||||||||    
T  43611430 ttagctcagttggtatggac-aatacataatatatgtaaggtat--ggggttcaaaccccg 43611487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 8269424 - 8269353
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||| |||||| ||||||||||||| |||||  | ||||||||||||||| ||||||| ||||    
T  8269424 cttagctcagttggtaaggacaa-tacataatatatgcaaggt--ccggggttcaaaccccgaccaccacaaaaa 8269353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 3509997 - 3509926
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||| ||| ||||||||||| |||| | |||||||||||| | |||||||||||||||    
T  3509997 cttagctcagttggtatggac-aatgcataatatatgcaagg-tccgggggttcaaa-ctcggccaccaccaaaa 3509926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 14520947 - 14521021
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaac 164  Q
    ||||||||||||||||||||||| ||| ||||| ||||| || ||||  ||||||| ||||||||||||||| |||||    
T  14520947 agcttagctcagttggtatggac-aatgcataaaatatgcaaagttt--ggggttcgaaccccggccaccacaaaaac 14521021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 17139575 - 17139502
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| |||||| | ||||||||||  |||||  | ||||||||||||||| ||||||||||||    
T  17139575 agcttagctcagttggtagggacaa-tgcataatatattcaaggt--ccggggttcaaaccccgaccaccaccaaaa 17139502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 23979451 - 23979401
Alignment:
Q  111 aatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||| |||||  ||||||||||||||| ||||||||||||    
T  23979451 aatacataatatatgtatggttt--ggggttcaaaccccgaccaccaccaaaa 23979401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 27533246 - 27533319
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||| |||||||||| |||||| | ||||||||||| ||||||   ||||||||||||||| ||||||||||||    
T  27533246 agcttagatcagttggtagggacaa-tgcataatatatgcaaggttc--ggggttcaaaccccgaccaccaccaaaa 27533319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 32163198 - 32163272
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||| ||||||| |||||| ||||||||||| || ||||  || ||| ||||||| |||||||||||||    
T  32163198 agcttagctcagctggtatgaacaaatgcataatatatgcaaagttt--ggagttgaaaccccagccaccaccaaaa 32163272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 39302952 - 39303021
Alignment:
Q  91 tagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||| |||||| ||||||| ||||| |||||  ||| ||||||||||||||||||||| ||||    
T  39302952 tagctcagttggtaaggacaa-tacataaaatatgcaaggt--cggtggttcaaaccccggccaccacaaaaa 39303021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 42888578 - 42888651
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||| ||| ||||| ||||| ||||  || ||||||| |||||| |||||||||||||    
T  42888578 agcttagctcagttggtatggac-aatgcataaaatatgcaagg--tccggggttcgaacccccgccaccaccaaaa 42888651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 33200044 - 33200084
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgta 127  Q
    |||||||||||||||||| |||||||| |||||||||||||    
T  33200044 agcttagctcagttggtagggacaaatgcataatatatgta 33200084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 40268213 - 40268256
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggt 131  Q
    ||||||||||||||||||||||| | |||||||||||||||||||    
T  40268213 agcttagctcagttggtatggac-agtacataatatatgtaaggt 40268256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 29739338 - 29739413
Alignment:
Q  85 ttagcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||||| |||| ||| ||||| ||||| ||||  || |||||||||||| |||| ||||||||||    
T  29739338 ttagcttagctcagttggtaaggac-aatgcataaaatatgcaagg--tccggggttcaaacctcggctaccaccaaaa 29739413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 49432049 - 49431978
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||| ||||||| |||  ||| |||||||||||||||||  | ||||||||||||||||||||||| ||||    
T  49432049 cttagctcggttggta-ggaataatgcataatatatgtaaggt--ccggggttcaaaccccggccaccacaaaaa 49431978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 17188726 - 17188681
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggttt 133  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  17188726 agcttagctcagttggtatggac-aatgcataaaatatgtaaggttt 17188681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 24752706 - 24752636
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataat-atatgtaaggtttcgggggttcaaaccccggccaccacc 159  Q
    ||||||||||||||||||||||| ||| |||||| ||||| ||||  || ||||||| ||||||||||||||||    
T  24752706 agcttagctcagttggtatggac-aatgcataataatatgcaagg--tctggggttcgaaccccggccaccacc 24752636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 25532976 - 25533038
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggc 152  Q
    ||||||| ||||||||||||||| ||| ||||||||||| ||||  || |||||||||||||||||    
T  25532976 agcttagttcagttggtatggac-aatgcataatatatgcaagg--tccggggttcaaaccccggc 25533038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 41677648 - 41677607
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaag 129  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  41677648 agcttagctcagttggtaaggac-aatacataatatatgtaag 41677607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 2613725 - 2613769
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtt 132  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  2613725 agcttagctcagttggtatggac-aatgcataaaatatgtaaggtt 2613769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 5037399 - 5037476
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaagg-tttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||| |||  ||||||||||||||||||| ||||   || ||||||||||| ||| ||||||| ||||    
T  5037399 agcttagctcagtttgtagagacaaatacataatatatgcaaggaggtctggggttcaaactccgaccaccacaaaaa 5037476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 5907802 - 5907875
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||| | |||||| | ||||||||||| |||||  |  ||||||||||||||| |||||||||||    
T  5907802 agcttagctcagttggcaaggacaa-tgcataatatatgcaaggt--ccagggttcaaaccccggacaccaccaaaa 5907875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 7652107 - 7652147
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggt 131  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  7652107 ttagttcagttggtatggacaa-tacataatatatgtaaggt 7652147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 7925367 - 7925439
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||  ||||| | ||||||||||| ||||||   |||||||||||| |||||||||||||||    
T  7925367 agcttagctcagttggtagagacaa-tgcataatatatg-aaggttc--ggggttcaaacctcggccaccaccaaaa 7925439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 8253742 - 8253786
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtt 132  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  8253742 agcttagctcagttggtatggac-aatgcataatatatgcaaggtt 8253786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 9005682 - 9005755
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| ||||||||||| |||||| ||||||||||||| |||||  |  |||||||||||||  ||||||||||||    
T  9005682 agcttaactcagttggtagggacaa-tacataatatatggaaggt--catgggttcaaaccccaaccaccaccaaaa 9005755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 14768816 - 14768883
Alignment:
Q  94 ctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||| |||||| |  ||||||||||||| ||||||||| ||||||||||| ||||||| ||||    
T  14768816 ctcagttggtagggacaa-tgtataatatatgtaaagtttcgggg-ttcaaaccccgaccaccacaaaaa 14768883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 19620579 - 19620652
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| |||| ||||||||||||||| ||||  || |||||||||| |  || |||||||||||    
T  19620579 agcttagctcagttggtaaggac-aatacataatatatgcaagg--tccggggttcaaatcttggacaccaccaaaa 19620652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 28393817 - 28393772
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtt 132  Q
    |||||| ||||||||||| |||||||| ||||||||||| ||||||    
T  28393817 agcttatctcagttggtagggacaaatgcataatatatgcaaggtt 28393772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 32944739 - 32944812
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||| ||||||||||||| ||| ||||||||||| || |  || ||||||| ||||||| ||||||||||||    
T  32944739 agcttagcttagttggtatggac-aatgcataatatatgcaacg--tctggggttcgaaccccgaccaccaccaaaa 32944812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 34142422 - 34142378
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtt 132  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||    
T  34142422 agcttagctcagttggtatgcac-aatacataatatatgcaaggtt 34142378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 40411811 - 40411738
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||| |||||| |||||| |||||||| ||||||||||  |  |||||||||||||| ||||||| ||||    
T  40411811 agcttagctcaattggtaaggacaa-tacataatgtatgtaaggt--ccagggttcaaaccccgaccaccacgaaaa 40411738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 43356441 - 43356509
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaa 161  Q
    ||||| |||||||||| |||||| | |||||||||||||||||||  || |||||||||||| ||||||||||    
T  43356441 cttagttcagttggta-ggacaa-tgcataatatatgtaaggttt--ggagttcaaaccccgaccaccaccaa 43356509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 43426183 - 43426227
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtt 132  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  43426183 agcttagctcagttggtagggac-aatacataaaatatgtaaggtt 43426227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 45140064 - 45139991
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||  |  | ||| |||||||||||||||| ||||    
T  45140064 agcttagctcagttggtatggacaa-tgcataatatatgcaaggt--ccagagtttaaaccccggccaccacaaaaa 45139991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 48100725 - 48100782
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaacc 147  Q
    ||||||||||||||||||||||| ||| ||||| ||||| |||||||  ||||||||||||    
T  48100725 agcttagctcagttggtatggac-aatgcataaaatatgcaaggttt--ggggttcaaacc 48100782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 11344443 - 11344483
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgta 127  Q
    ||||||||| |||||||| |||||||| |||||||||||||    
T  11344443 agcttagcttagttggtagggacaaatgcataatatatgta 11344483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 11502463 - 11502503
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgta 127  Q
    ||||||||| |||||||| |||||||| |||||||||||||    
T  11502463 agcttagcttagttggtagggacaaatgcataatatatgta 11502503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 15670677 - 15670640
Alignment:
Q  111 aatacataatatatgtaaggtttcgggggttcaaaccccg 150  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  15670677 aatacataatatatgtaaggttt--ggggttcaaaccccg 15670640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 123
Target Start/End: Complemental strand, 16067176 - 16067148
Alignment:
Q  95 tcagttggtatggacaaatacataatata 123  Q
    |||||||||||||||||||||||||||||    
T  16067176 tcagttggtatggacaaatacataatata 16067148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 17201262 - 17201219
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggttt 133  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||    
T  17201262 cttagctcagttggtagggacaa-tacataatatatttaaggttt 17201219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 18166606 - 18166678
Alignment:
Q  88 gcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| ||| ||| ||||||||||| || |  || ||||||||||||||| |||| |||||||    
T  18166606 gcttagctcagttggtatagac-aatgcataatatatgcaaag--tccggggttcaaaccccgaccactaccaaaa 18166678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 38448924 - 38448852
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaa 162  Q
    |||||||||||||||||| |||| ||| ||||||||||| ||||  || ||||||| || ||||| ||||||||||    
T  38448924 agcttagctcagttggtaaggac-aatgcataatatatgcaagg--tccggggttcgaatcccggacaccaccaaa 38448852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 39252315 - 39252272
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggt 131  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||    
T  39252315 agcttagctcagttgatatcgacaa-tacataatatatgtaaggt 39252272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 41926825 - 41926868
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggt 131  Q
    |||||||||||||||||| |||| ||| |||||||||||||||||    
T  41926825 agcttagctcagttggtaaggac-aatgcataatatatgtaaggt 41926868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 52279514 - 52279584
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||| ||||||| || ||||||||||||||||||||   |||||||||| || || ||| |||||||    
T  52279514 cttagctcagttagtatggataa-tacataatatatgtaaggtt---ggggttcaaatccaggtcactaccaaaa 52279584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 27848160 - 27848232
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaa 161  Q
    |||||| |||||||||||| ||||||| ||||||||||| ||||  || ||||||||||||||||||||||||||    
T  27848160 agcttaactcagttggtattgacaaatgcataatatatgcaagg--tccggggttcaaaccccggccaccaccaa 27848232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 24592902 - 24592831
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||| |||||| | ||||||||||| ||||| |  ||||||||||||||||||||||||||||    
T  24592902 cttagctcagttggtagggacaa-tgcataatatatgcaaggtct--ggggttcaaaccccggccaccaccaaaa 24592831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 10735889 - 10735816
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| |||| | | ||||||||||| |||||  | ||||||||||||||||||||||||||||    
T  10735889 agcttagctcagttggtagggacga-tgcataatatatgcaaggt--ccggggttcaaaccccggccaccaccaaaa 10735816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 22523070 - 22522997
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||   | |||||||| |||||||||||| ||||    
T  22523070 agcttagctcagttggtatggac-aatacataatatatgcaaggtt--cgaggttcaaatcccggccaccacaaaaa 22522997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 29544630 - 29544703
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||| |||||| |||||| | ||||||||||| |||||  | ||||||||||||||||||||||||||||    
T  29544630 agcttagctcaattggtagggacaa-tgcataatatatgcaaggt--ccggggttcaaaccccggccaccaccaaaa 29544703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 4927505 - 4927434
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||| |||||||  |||||||||||||||||  | ||||||||||||||||||| ||| ||||    
T  4927505 cttagctcagttggtagggacaaag-cataatatatgtaaggt--ccggggttcaaaccccggccatcacaaaaa 4927434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 9547467 - 9547397
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccacca 160  Q
    |||||| |||||||| ||||||||| | ||||||||||| |||||||  ||||||||||||||| |||||||||    
T  9547467 agcttaactcagttgatatggacaa-tgcataatatatgcaaggttt--ggggttcaaaccccgaccaccacca 9547397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 2256974 - 2257047
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| |||||||||||||||| ||| ||||||||||| ||||  || ||||||| ||||||||||||||| ||||    
T  2256974 agcttaactcagttggtatggac-aatgcataatatatgcaagg--tctggggttcgaaccccggccaccacaaaaa 2257047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 6765613 - 6765686
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||||  || ||||||| |||| || ||||||||||||    
T  6765613 agcttagctcagttggtatggac-aatgcataaaatatgtaagg--tccggggttcgaaccacgaccaccaccaaaa 6765686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 9383267 - 9383194
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||||  ||||||  |||||| |||||||| ||||    
T  9383267 agcttagctcagttggtatggac-aatgcataatatatgcaaggttt--ggggtttcaacccctgccaccacaaaaa 9383194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 5028859 - 5028923
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggcca 154  Q
    ||||||||||||||| |  |||||| | |||||||||||||||||||  |||||||||||||||||||    
T  5028859 agcttagctcagttgattaggacaa-tgcataatatatgtaaggttt--ggggttcaaaccccggcca 5028923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 43826500 - 43826457
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggt 131  Q
    |||||||||||||||||| |||||| |||||||||||||||||||    
T  43826500 agcttagctcagttggtaaggacaa-tacataatatatgtaaggt 43826457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 130
Target Start/End: Complemental strand, 8761622 - 8761580
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaagg 130  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  8761622 agcttaactcagttggtatggac-aatacataatatatgtaagg 8761580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 15333128 - 15333177
Alignment:
Q  87 agcttagctcagttggtatggaca---aatacataatatatgtaaggttt 133  Q
    ||||||||||||||||||||||||   ||||||||||||||| |||||||    
T  15333128 agcttagctcagttggtatggacagacaatacataatatatgcaaggttt 15333177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 44526131 - 44526198
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccacca 157  Q
    ||||||||||||||||||||||| ||| ||||||||| | ||||  || ||| ||||||||||||||||||    
T  44526131 agcttagctcagttggtatggac-aatgcataatatacgcaagg--tccgggattcaaaccccggccacca 44526198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 44810706 - 44810781
Alignment:
Q  85 ttagcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||| |||||||||  | ||| ||||||||||||| |||||  | |||||||||||||| |||||||||||||    
T  44810706 ttagcttagcccagttggtagaggcaa-tacataatatatgcaaggt--ccggggttcaaaccccagccaccaccaaaa 44810781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 25186297 - 25186227
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||| ||||||||| | ||||||||||| |||||  | |||||||||||||| |||||||| ||||    
T  25186297 ttagctcagttgatatggacaa-tgcataatatatgcaaggt--ccggggttcaaaccccagccaccacaaaaa 25186227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 32957598 - 32957528
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||| ||||||||| |||| | |||||||||||||||||||  |||||| ||||| |||||||||| ||||    
T  32957598 ttagctcggttggtatgaacaa-tgcataatatatgtaaggttt--ggggtttaaacctcggccaccacaaaaa 32957528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 4238762 - 4238806
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtt 132  Q
    |||||||||||||| |||||||| ||| ||||||||||||||||||    
T  4238762 agcttagctcagttagtatggac-aatgcataatatatgtaaggtt 4238806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 10156020 - 10156064
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtt 132  Q
    |||||||||||||||||| |||| ||||||||||||||| ||||||    
T  10156020 agcttagctcagttggtaaggac-aatacataatatatgcaaggtt 10156064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 12599923 - 12599850
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| ||||||| |||||||||| ||||||||||||| ||||  || ||||||| ||||||| ||||||| ||||    
T  12599923 agcttaactcagttagtatggacaa-tacataatatatgcaagg--tctggggttcgaaccccgaccaccacaaaaa 12599850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 19156222 - 19156149
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||| |||||| |||||  ||||||||||||| |||||||  | |||||||||||| | |||||||||||    
T  19156222 agcttagctcaattggtaaggacag-tacataatatatgcaaggttt--gaggttcaaaccccagacaccaccaaaa 19156149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 19814909 - 19814835
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| |||||||||||||||||||| | ||||||||| |||   || | ||||||||||| |||||| |||||||    
T  19814909 agcttaactcagttggtatggacaaatgcgtaatatatgcaag--atctgcggttcaaacccaggccacaaccaaaa 19814835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 20120779 - 20120706
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| |||| ||| ||||||||||| ||||||   |||||||||| ||||| |||||| ||||    
T  20120779 agcttagctcagttggtaaggac-aatgcataatatatgcaaggtt--cggggttcaaatcccggacaccacaaaaa 20120706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 20455894 - 20455967
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||| ||||||||||| ||| ||||||||||| ||||  || ||||||| || |||||||||||| ||||    
T  20455894 agcttagctcaattggtatggac-aatgcataatatatgcaagg--tccggggttcgaatcccggccaccacaaaaa 20455967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 20565133 - 20565060
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| |||| ||| ||||||||||| ||||  || ||||||||||||||  ||||||| ||||    
T  20565133 agcttagctcagttggtagggac-aatgcataatatatgcaagg--tccggggttcaaaccccaaccaccacaaaaa 20565060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 25625727 - 25625792
Alignment:
Q  95 tcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| |||||||||| | |||||||||||||||||  | ||||||||||||| | ||||||||||||    
T  25625727 tcagtttgtatggacaatt-cataatatatgtaaggt--ccggggttcaaacccggaccaccaccaaaa 25625792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 27411095 - 27411168
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||| |||||||   | ||||||||||| |||||  | ||||||| ||||||||||||||||||||    
T  27411095 agcttagctcagttgatatggacct-tgcataatatatgcaaggt--ccggggttcgaaccccggccaccaccaaaa 27411168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 31815945 - 31815872
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| ||||||||||| |||||| | ||||||||||| |||||  | ||||||||||||||| ||||||| ||||    
T  31815945 agcttaactcagttggtagggacaa-tgcataatatatgcaaggt--ccggggttcaaaccccgaccaccacaaaaa 31815872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 33063989 - 33064062
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||| ||||||| ||| ||||||||||| ||||  || || |||| ||| ||||||||||||||||    
T  33063989 agcttagctcagttgatatggac-aatgcataatatatgcaagg--tccggagttcgaactccggccaccaccaaaa 33064062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 35820359 - 35820290
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccacc 159  Q
    |||||||||||||||||| |||| ||| ||||||| ||| ||||  || |||||||||||| |||||||||||    
T  35820359 agcttagctcagttggtagggac-aatgcataatacatgcaagg--tccggggttcaaacctcggccaccacc 35820290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 10991545 - 10991588
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggt 131  Q
    |||||| ||||||||||| |||||| |||||||||||||||||||    
T  10991545 agcttaactcagttggtaaggacaa-tacataatatatgtaaggt 10991588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 15381636 - 15381679
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggt 131  Q
    |||||||||||||| ||| |||||| |||||||||||||||||||    
T  15381636 agcttagctcagttagtagggacaa-tacataatatatgtaaggt 15381679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 29896325 - 29896280
Alignment:
Q  115 cataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaa 162  Q
    ||||||||||| |||||||  ||||||||||||||| |||||||||||    
T  29896325 cataatatatgcaaggttt--ggggttcaaaccccgaccaccaccaaa 29896280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 41859862 - 41859922
Alignment:
Q  94 ctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccacca 157  Q
    |||||||||||||||||| | ||||| ||||| ||||| |  ||||||||||||||||||||||    
T  41859862 ctcagttggtatggacaa-tgcataaaatatgcaaggtct--ggggttcaaaccccggccacca 41859922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 42066715 - 42066787
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaa 162  Q
    ||||||||||||||||||||||| ||| || |||||||| ||||  || ||||||  |||| ||||||||||||||    
T  42066715 agcttagctcagttggtatggac-aatgcacaatatatgcaagg--tccggggtttgaacctcggccaccaccaaa 42066787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 22251519 - 22251444
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaac 164  Q
    |||||| |||||||||||||||||||| ||||||||||| | ||  || ||||||| |||||||||||||||||||||    
T  22251519 agcttaactcagttggtatggacaaatgcataatatatgcacgg--tccggggttcgaaccccggccaccaccaaaac 22251444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 25340982 - 25340909
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||||| | ||||| ||||| |||||  | ||||||||||||||||||||||||||||    
T  25340982 agcttagctcagttggtatggacaa-tgcataaaatatgcaaggt--ccggggttcaaaccccggccaccaccaaaa 25340909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 29631189 - 29631262
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||||   ||| ||||||||||||||||||||||||    
T  29631189 agcttagctcagttggtatggac-aatgcataatatatgcaaggtt--cgggattcaaaccccggccaccaccaaaa 29631262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 38131017 - 38130944
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| |||||||||||||||||| | ||||||||||| |||||  | ||||||||||||||||||||||||||||    
T  38131017 agcttaactcagttggtatggacaa-tgcataatatatgcaaggt--ccggggttcaaaccccggccaccaccaaaa 38130944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 25441556 - 25441485
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||| | ||||||||||| ||||| |  ||||||||||||||||||||||| ||||    
T  25441556 cttagctcagttggtatggacaa-tgcataatatatgcaaggtct--ggggttcaaaccccggccaccacaaaaa 25441485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 334899 - 334832
Alignment:
Q  94 ctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||||| ||||| ||||| ||||  || ||||||||||||||||||||||| ||||    
T  334899 ctcagttggtatggacaaatgcataaaatatgcaagg--tccggggttcaaaccccggccaccacaaaaa 334832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 35863871 - 35863798
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| |||| ||||||||||||||| ||||  || |||||||||||| |||||||||| ||||    
T  35863871 agcttagctcagttggtaaggac-aatacataatatatgcaagg--tctggggttcaaacctcggccaccacaaaaa 35863798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 45431940 - 45432024
Alignment:
Q  76 aagttcttcttagcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||| ||| |||||||||||||||||||| |||| ||| ||||||||||| ||||  || ||||||||||||| ||||||||| ||||    
T  45431940 aagtccttgttagcttagctcagttggtagggac-aatgcataatatatgcaagg--tccggggttcaaaccctggccaccacaaaaa 45432024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 2186483 - 2186412
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||| |||||||||||||||||| ||||||||||||||||||  || ||||||||||||||| ||| ||| ||||    
T  2186483 cttaactcagttggtatggacaa-tacataatatatgtaagg--tctggggttcaaaccccgaccatcacaaaaa 2186412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 53683514 - 53683472
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaag 129  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  53683514 agcttagctcagttgataaggacaaatacataatatatgtaag 53683472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 7464549 - 7464476
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| ||||||||||| |||||| | |||||||||||||||||  | ||||||||||||||| ||||||| ||||    
T  7464549 agcttaactcagttggtagggacaa-tgcataatatatgtaaggt--ccggggttcaaaccccgaccaccacaaaaa 7464476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 19126727 - 19126662
Alignment:
Q  95 tcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||| | ||||| |||||||||||||  |||||||||| || ||||||||||||||    
T  19126727 tcagttggtatggacaa-tgcataaaatatgtaaggttt--ggggttcaaatcctggccaccaccaaaa 19126662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 35347354 - 35347296
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaacc 147  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||||  || ||||||||||||    
T  35347354 agcttagctcagttgctatggacaaatgcataatatatgcaagg--tctggggttcaaacc 35347296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 53996302 - 53996375
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||  || ||||||| || |||||||||||| ||||    
T  53996302 agcttagctcagttggtatggac-aatgcataatatatgcaagg--tctggggttcgaatcccggccaccacaaaaa 53996375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 27185480 - 27185548
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccac 158  Q
    |||||||||||||||||| |||| ||||||||||||||| ||||  || |||||||||||| || |||||||    
T  27185480 agcttagctcagttggtagggac-aatacataatatatgcaagg--tctggggttcaaacctcgaccaccac 27185548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 32843320 - 32843252
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccac 158  Q
    ||||||||||||||||| ||||||| | ||||| ||||| ||||| |  |||||||||||||||||||||||    
T  32843320 agcttagctcagttggtttggacaa-tgcataaaatatgcaaggtct--ggggttcaaaccccggccaccac 32843252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 16873786 - 16873862
Alignment:
Q  85 ttagcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||| ||||||||||| | |||||| ||||||||||| ||||||   |||||||||||| ||  |||||||||||    
T  16873786 ttagcttaactcagttggtaggaacaaatgcataatatatgcaaggtt--aggggttcaaacctcgatcaccaccaaaa 16873862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 52119379 - 52119446
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccacca 157  Q
    |||||||||||||||||| |||| ||| ||||||||||| ||||||   ||||||| ||||||||||||||    
T  52119379 agcttagctcagttggtaaggac-aatgcataatatatgcaaggtt--cggggttcgaaccccggccacca 52119446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 4601854 - 4601920
Alignment:
Q  94 ctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||| ||||||| | ||||||| ||| |||||  | ||||||||||||||||||||||||||||    
T  4601854 ctcagttggtttggacaa-tgcataataaatgcaaggt--ccggggttcaaaccccggccaccaccaaaa 4601920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 5117211 - 5117256
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggttt 133  Q
    ||||||||||||||| || |||||| |||||||||||||||||||||    
T  5117211 agcttagctcagttgataaggacaa-tacataatatatgtaaggttt 5117256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 10498753 - 10498683
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccacca 160  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||  |  | ||||||||| ||||||||||||    
T  10498753 agcttagctcagttggtatggacaa-tgcataatatatgcaaggt--catgagttcaaacctcggccaccacca 10498683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 33404231 - 33404276
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggttt 133  Q
    ||||||||||||||| ||||||| |||||||||||||||||| ||||    
T  33404231 agcttagctcagttgatatggac-aatacataatatatgtaaagttt 33404276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 45254234 - 45254279
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggttt 133  Q
    |||||||||||||||||| |||| ||| |||||||||||||||||||    
T  45254234 agcttagctcagttggtaaggac-aatgcataatatatgtaaggttt 45254279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 125
Target Start/End: Complemental strand, 46336567 - 46336529
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatg 125  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  46336567 agcttagctcagttggtagggataaatacataatatatg 46336529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 78 - 163
Target Start/End: Complemental strand, 48849829 - 48849748
Alignment:
Q  78 gttcttcttagcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| | |||||| ||||||||||||| |||| | ||||||||||| |||||  | ||||||||||||||||||||||| ||||    
T  48849829 gttcttgtgagcttaactcagttggtatg-acaa-tgcataatatatgcaaggt--ccggggttcaaaccccggccaccacaaaaa 48849748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 78 - 163
Target Start/End: Complemental strand, 55066667 - 55066585
Alignment:
Q  78 gttcttcttagcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| | |||||||||||||||||| ||| || | ||||||||||| | ||| |  |||||||||| |||||||||||||||||    
T  55066667 gttcttgtgagcttagctcagttggtacggataa-tgcataatatatgcatggtct--ggggttcaaatcccggccaccaccaaaa 55066585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 10926472 - 10926545
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| |||| ||| ||||||||||| ||||||   ||||||||||   |||||||||||||||    
T  10926472 agcttagctcagttggtaaggac-aatgcataatatatgcaaggtt--cggggttcaaatgtcggccaccaccaaaa 10926545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 14827528 - 14827601
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||| ||| ||||| ||||| |||   || |||||| |||||||||||||||| ||||    
T  14827528 agcttagctcagttggtatggac-aatgcataaaatatgcaag--atccggggtttaaaccccggccaccacaaaaa 14827601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 16793032 - 16792959
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||| |||||||||| ||||| | ||||||||||| |||||  |  ||||||||||||||| |||||||||||    
T  16793032 agcttagcacagttggtatagacaa-tgcataatatatgcaaggt--ccagggttcaaaccccggtcaccaccaaaa 16792959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 18554732 - 18554777
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtt 132  Q
    |||||| ||||||||||| |||||||| ||||||||||| ||||||    
T  18554732 agcttaactcagttggtagggacaaatgcataatatatggaaggtt 18554777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 20612308 - 20612262
Alignment:
Q  115 cataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||| |||||||  |||||||||||||||||||| |||||||    
T  20612308 cataatatatgcaaggttt--ggggttcaaaccccggccactaccaaaa 20612262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 48209266 - 48209197
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaa 162  Q
    |||||||||||| || |||||| |||||||||||| |||||||  |||  ||||||||||| |||||||||||    
T  48209266 ttagctcagttgatagggacaa-tacataatatatataaggttcaggg--ttcaaaccccgaccaccaccaaa 48209197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 50037314 - 50037387
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||| ||| |||||| |||| ||||||   ||||||||||| || |||||||| ||||    
T  50037314 agcttagctcagttggtatggac-aatgcataatgtatgcaaggtt--cggggttcaaactccagccaccactaaaa 50037387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 52904198 - 52904130
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaa 162  Q
    ||||||||||||||| |||||| | ||||||||||| || ||  |||||||||||||||| ||||||||||||    
T  52904198 ttagctcagttggtaaggacaa-tgcataatatatgcaatgt--cgggggttcaaacccc-gccaccaccaaa 52904130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 977999 - 977956
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggt 131  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||    
T  977999 agcttagctcagttggtatggac-aatgcataatatatgcaaggt 977956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 35392009 - 35392061
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaa 145  Q
    |||||||||||||||  ||||| |||||||||||||||||||||  ||||||||||    
T  35392009 ttagctcagttggtaatgacaa-tacataatatatgtaaggttt--ggggttcaaa 35392061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 48796276 - 48796208
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccac 158  Q
    |||||||||||||| || ||||||| | ||||| ||||| ||||||   |||||||||||||||||||||||    
T  48796276 agcttagctcagttagtttggacaa-tgcataagatatgcaaggttc--ggggttcaaaccccggccaccac 48796208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 14297015 - 14296942
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||| ||||||||||||||| ||||||| |||||||||||  | ||||||||||||||||||||||| ||||    
T  14297015 agcttagctgagttggtatggacaa-tacataaaatatgtaaggt--ccggggttcaaaccccggccaccacaaaaa 14296942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 10507587 - 10507513
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||| |||||||| |||||||| ||||||||||||| ||||  || |||||||||||  |||||||||||||||    
T  10507587 agcttagatcagttggcatggacaattacataatatatgcaagg--tctggggttcaaacatcggccaccaccaaaa 10507513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 164
Target Start/End: Complemental strand, 24623372 - 24623301
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaac 164  Q
    |||||||||||| ||||||||| | ||||||||||||||||||   ||||||||||||||| ||||||| |||||    
T  24623372 ttagctcagttgatatggacaa-tgcataatatatgtaaggttc--ggggttcaaaccccgaccaccactaaaac 24623301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 5655365 - 5655297
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccacca 157  Q
    |||||||||||||||||| |||| ||||||||||||||| | || |||||| |||| ||||||||||||||    
T  5655365 agcttagctcagttggtagggac-aatacataatatatgcacgg-ttcgggagttcgaaccccggccacca 5655297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 655807 - 655734
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||| ||| ||| ||||||||||| ||||  || ||||||| |||||||||||| |||||||    
T  655807 agcttagctcagttggtatcgac-aatgcataatatatgcaagg--tccggggttcgaaccccggccactaccaaaa 655734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 11456424 - 11456361
Alignment:
Q  96 cagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||| | |||||||||||||||||    ||||||||||||||||||||||| ||||    
T  11456424 cagttggtatggacaa-tgcataatatatgtaaggtc---ggggttcaaaccccggccaccacaaaaa 11456361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 17151239 - 17151312
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||| ||||||||  ||||| ||||||||||||| ||||| |  |||||||||||| |||||||||||||||    
T  17151239 agcttagctaagttggtagtgacaa-tacataatatatgcaaggtct--ggggttcaaacctcggccaccaccaaaa 17151312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 155
Target Start/End: Original strand, 20744141 - 20744206
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccac 155  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||  || ||||||||||||||| ||||    
T  20744141 agcttagctcagttggtatggac-aatgcataatatatgcaagg--tctggggttcaaaccccgaccac 20744206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 21847197 - 21847270
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| |||| ||||||||||||||| ||||  |  ||||||| || |||||||||||||||||    
T  21847197 agcttagctcagttggtagggac-aatacataatatatgcaagg--tacggggttcgaatcccggccaccaccaaaa 21847270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 22792998 - 22792925
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| ||||||  | |||||||||||||||  || ||||||||||||||| |||| |||||||    
T  22792998 agcttagctcagttggtaaggacaacga-ataatatatgtaagg--tccggggttcaaaccccgaccacgaccaaaa 22792925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 32053791 - 32053864
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||||   | ||||||||| |||||||||| |||||    
T  32053791 agcttagctcagttggtatggac-aatgcataatatatgcaaggtt--cgtggttcaaactccggccaccaacaaaa 32053864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 29740485 - 29740553
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccac 158  Q
    ||||||||||| ||||||||||||| | ||||||||| | |||||  | |||||||||||||||||||||||    
T  29740485 agcttagctcaattggtatggacaa-tgcataatatacgcaaggt--ccggggttcaaaccccggccaccac 29740553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 16390432 - 16390499
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccacca 157  Q
    |||||| ||||||||||| |||||| | |||||||||||||||||  | |||||||||||| |||||||||    
T  16390432 agcttacctcagttggtagggacaa-tgcataatatatgtaaggt--ccggggttcaaacctcggccacca 16390499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 26400867 - 26400934
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccacca 157  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||||  || ||||||  ||||||||||||||    
T  26400867 agcttagctcaattggtatggac-aatacataatatatgcaagg--tccggggtttgaaccccggccacca 26400934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 4455652 - 4455586
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccac 158  Q
    ||||||||||||||||||||| ||  ||||||||||| ||||  || ||||||||||||||| |||||||    
T  4455652 cttagctcagttggtatggac-aaggcataatatatgcaagg--tctggggttcaaaccccgaccaccac 4455586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 8569719 - 8569785
Alignment:
Q  94 ctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||| ||||||||||||| | ||||||||||| |||||  | ||||||||||||||||||||||| ||||    
T  8569719 ctcaattggtatggacaa-tgcataatatatgcaaggt--ccggggttcaaaccccggccaccacaaaaa 8569785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 10018406 - 10018475
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||| ||| || | ||||||||||||||||||   ||||||||||| ||||||||||||||||    
T  10018406 ttagctcagttggta-ggataa-tgcataatatatgtaaggttc--ggggttcaaactccggccaccaccaaaa 10018475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 125
Target Start/End: Original strand, 13656271 - 13656309
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatg 125  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  13656271 agcttagctcagttggtagggacaaatgcataatatatg 13656309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 9372413 - 9372341
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||| ||||||||||   ||||||||||| |||  ||||||| |||||||||||||| |||||||||    
T  9372413 agcttagctcagttagtatggacaacg-cataatatatgcaag--ttcgggg-ttcaaaccccggcccccaccaaaa 9372341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 21029425 - 21029380
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtt 132  Q
    |||| ||||||||||||| |||||||| ||||||||||| ||||||    
T  21029425 agctgagctcagttggtagggacaaatgcataatatatgcaaggtt 21029380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 24248168 - 24248241
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||| ||||||||| ||| || ||||||||||||||||||  || ||||||||| || || ||||||||||||    
T  24248168 agcttagcacagttggtaaggataa-tacataatatatgtaagg--tccggggttcaaccctcgaccaccaccaaaa 24248241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 8917602 - 8917670
Alignment:
Q  87 agcttagctcagttggtatggacaaatacat-aatatatgtaaggtttcgggggttcaaaccccggccacca 157  Q
    |||||| ||||||| ||| |||||| ||||| |||||||||||||| |  ||||||||||||||||||||||    
T  8917602 agcttaactcagttagtaaggacaa-tacattaatatatgtaaggtct--ggggttcaaaccccggccacca 8917670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 20720839 - 20720796
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggt 131  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||    
T  20720839 agcttagctcagttgttatggac-aatgcataatatatgtaaggt 20720796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 24269886 - 24269960
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||| |||||||| ||| ||||| ||||| |||| ||||||| || || |||| |||||||||||||    
T  24269886 agcttagctcagttagtatggac-aatgcataaaatatgcaagg-ttcggggtttgaatcccccgccaccaccaaaa 24269960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 6489010 - 6489083
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| |||||| | ||||||||||| ||||| |  ||||||||||||||||||||||||||||    
T  6489010 agcttagctcagttggtagggacaa-tgcataatatatgcaaggtct--ggggttcaaaccccggccaccaccaaaa 6489083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 22522859 - 22522786
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||| |||||||||||||| | ||||||||||| |||||  | ||||||||||||||||||||||||||||    
T  22522859 agcttagctcggttggtatggacaa-tgcataatatatgcaaggt--ccggggttcaaaccccggccaccaccaaaa 22522786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 26655467 - 26655540
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||| |||||||||||||||||||| | |||||||||||||||||  | ||||||| ||||||||||||||||||||    
T  26655467 agctcagctcagttggtatggacaa-tgcataatatatgtaaggt--ccggggttcgaaccccggccaccaccaaaa 26655540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 26927052 - 26927125
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||| |||||||||||||||||||| | |||||||||||||||||  | ||||||| ||||||||||||||||||||    
T  26927052 agctcagctcagttggtatggacaa-tgcataatatatgtaaggt--ccggggttcgaaccccggccaccaccaaaa 26927125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 12189997 - 12190067
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||| ||||||||||||||| ||||||||||||||||||  ||||||||||||||||| |||||||| ||||    
T  12189997 cttagcttagttggtatggacaa-tacataatatatgtaagg--tcgggggttcaaacccc-gccaccacaaaaa 12190067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 6624779 - 6624852
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||| |||||||| | ||||||||||| |||||  | ||||||| ||||||||||||||||||||    
T  6624779 agcttagctcagttggcatggacaa-tgcataatatatgcaaggt--ccggggttcgaaccccggccaccaccaaaa 6624852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 26409256 - 26409323
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccacca 157  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||  || ||||||| ||||||| ||||||    
T  26409256 agcttagctcagttggtatggac-aatgcataatatatgtaagg--tccggggttcgaaccccgcccacca 26409323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 10199022 - 10199095
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||| ||| |||||||||| |||||| |  ||||||| || |||| ||||||||||||    
T  10199022 agcttagctcagttggtatggac-aatgcataatatatataaggtgt--ggggttcgaatcccgaccaccaccaaaa 10199095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 13864347 - 13864420
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| ||||||||||||| |||| ||||||||||||| |||||  | ||||||||||||||| ||||||| ||||    
T  13864347 agcttaactcagttggtatgaacaa-tacataatatatgcaaggt--ccggggttcaaaccccgaccaccacaaaaa 13864420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 15889414 - 15889487
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| |||||| | ||||||||||| ||||| | |||  ||||||||||| ||||||||||||    
T  15889414 agcttagctcagttggtagggacaa-tgcataatatatgcaaggtctaggg--ttcaaaccccgaccaccaccaaaa 15889487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 19068508 - 19068425
Alignment:
Q  76 aagttcttcttagcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||| | ||||||||||||||||||||||  ||| ||||||||||| ||||||   |||||||||||||||  |||||| ||||    
T  19068508 aagttcttttgagcttagctcagttggtatgga-taatgcataatatatgcaaggtt---ggggttcaaaccccgatcaccacgaaaa 19068425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 34436854 - 34436927
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| |||||| | ||||||||||| ||||   | ||||||||||||||| ||||||||||||    
T  34436854 agcttagctcagttggtagggacaa-tgcataatatatgcaaggg--ccggggttcaaaccccgcccaccaccaaaa 34436927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 37932333 - 37932406
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||  || ||||||| ||||| ||||||||| ||||    
T  37932333 agcttagctcagttggtatggac-aatgcataatatatgcaagg--tccggggttcgaaccctggccaccacaaaaa 37932406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 40716007 - 40715934
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||| ||| ||||||||| | ||||||||||| |||||  | ||||||||||||||||||||||| ||||    
T  40716007 agcttagctcaattgatatggacaa-tgcataatatatgcaaggt--ccggggttcaaaccccggccaccacaaaaa 40715934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 3445305 - 3445233
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaa 162  Q
    |||||||||||||||||| |||||| | |||||| |||| |||||  | |||||||||| ||||||||||||||||    
T  3445305 agcttagctcagttggtaaggacaa-tgcataatgtatgcaaggt--ccggggttcaaatcccggccaccaccaaa 3445233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 11720897 - 11720967
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaa 161  Q
    |||||| ||||||||||| |||||| | ||||||||||| |||||    ||||||||||||||||||||||||||    
T  11720897 agcttaactcagttggtagggacaa-tgcataatatatgcaaggtc---ggggttcaaaccccggccaccaccaa 11720967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 20721053 - 20721113
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccg 150  Q
    |||||| |||||||||||||||| ||||||||||||||| ||||  || |||||||||||||||    
T  20721053 agcttaactcagttggtatggac-aatacataatatatgcaagg--tccggggttcaaaccccg 20721113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 42515818 - 42515876
Alignment:
Q  95 tcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccac 155  Q
    ||||||||||||||||| | |||||||||||||||||  ||||| ||||||||||||||||    
T  42515818 tcagttggtatggacaa-tgcataatatatgtaaggtc-cggggattcaaaccccggccac 42515876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 29695020 - 29695091
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||| |||||||| ||||||||| | ||||||||||||||||||   | ||||||||||||| ||||||||||||    
T  29695020 cttaactcagttgatatggacaa-tgcataatatatgtaaggttc--gtggttcaaaccccgaccaccaccaaaa 29695091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 6734801 - 6734763
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgta 127  Q
    |||||||||||||||| |||||||| |||||||||||||    
T  6734801 cttagctcagttggtagggacaaatgcataatatatgta 6734763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 125
Target Start/End: Original strand, 20927642 - 20927679
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatg 125  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  20927642 agcttagctcagttggtatggac-aatacataatatatg 20927679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 18331710 - 18331783
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||| ||||||||||| ||| ||||| ||||| ||||  || ||||||||| ||||||||||||| ||||    
T  18331710 agcttagctcacttggtatggac-aatgcataaaatatgcaagg--tccggggttcaagccccggccaccacaaaaa 18331783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 19248482 - 19248555
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||| ||| ||| ||||||||||| || ||||  |||||||||| || || |||||||||||    
T  19248482 agcttagctcagttggtatagac-aatgcataatatatgcaatgttt--ggggttcaaatcctggtcaccaccaaaa 19248555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 21139207 - 21139134
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||| |||||||| |||||||| ||||||||||| ||||  || |||||||||| ||| |||||||| ||||    
T  21139207 agcttagctgagttggtagggacaaatgcataatatatgcaagg--tccggggttcaaaaccc-gccaccacaaaaa 21139134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 132
Target Start/End: Complemental strand, 23036761 - 23036721
Alignment:
Q  91 tagctcagttggtatggacaaatacataatatatgtaaggtt 132  Q
    |||||||||||||||||||||| |||||||||||| ||||||    
T  23036761 tagctcagttggtatggacaaa-acataatatatgcaaggtt 23036721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 24408498 - 24408571
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||| ||||| | | ||||||||||| ||||| |  ||||||||||||||| |||| |||||||    
T  24408498 agcttagctcagttggtttggacga-tgcataatatatgcaaggtct--ggggttcaaaccccgaccactaccaaaa 24408571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 163
Target Start/End: Complemental strand, 25862011 - 25861932
Alignment:
Q  78 gttcttcttagcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||| || ||||||||||| ||||||||    |||| ||||||||||||||||  | || |||||||||||||||||||| ||||    
T  25862011 gttctcctgagcttagctcaattggtatg----aataaataatatatgtaaggt--ccggagttcaaaccccggccaccacaaaaa 25861932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 34191436 - 34191509
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||  |||||| | ||||| ||||| |||||  | |||||||||||||||||||| |||||||    
T  34191436 agcttagctcagttggttgggacaa-tgcataaaatatgcaaggt--ccggggttcaaaccccggccactaccaaaa 34191509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 36321552 - 36321493
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccc 148  Q
    |||||||||||||||||| |||| ||| ||||||||||| ||||||| |||||||| |||||    
T  36321552 agcttagctcagttggtaaggac-aatgcataatatatgcaaggttt-gggggttcgaaccc 36321493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 39980511 - 39980584
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||  ||| ||||| ||||| ||||  || || |||||||||||| ||||||||||||    
T  39980511 agcttagctcagttggtatgga-taatgcataaaatatgcaagg--tccggagttcaaaccccgaccaccaccaaaa 39980584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 155
Target Start/End: Original strand, 42505875 - 42505945
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggt---ttcgggggttcaaaccccggccac 155  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||    |  ||||||||||||||||||||    
T  42505875 agcttagctcagttggtatggac-aatgcataatatatgcaaggtgcggtgcggggttcaaaccccggccac 42505945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 133622 - 133551
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaa 162  Q
    ||||||||||||||||| ||||| | | ||||| |||||||||||||  ||| |||||||||||||||| ||||||    
T  133622 agcttagctcagttggt-tggacga-tgcataaaatatgtaaggttt--gggtttcaaaccccggccactaccaaa 133551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 16036830 - 16036873
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggt 131  Q
    |||||||||||||||| |||||| ||||||||||||||| |||||    
T  16036830 agcttagctcagttggcatggac-aatacataatatatgcaaggt 16036873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 30843459 - 30843392
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccac 158  Q
    ||||||||||| ||||||||||||| | ||||||||||  || ||||  |||||||||||||||||||||||    
T  30843459 agcttagctca-ttggtatggacaa-tgcataatatattcaaagttt--ggggttcaaaccccggccaccac 30843392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 32559307 - 32559379
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaa 162  Q
    ||||||||||| ||| ||| ||||| | ||||| ||||||||||| |  |||||||||| ||||||||||||||||    
T  32559307 agcttagctcaattgatattgacaa-tgcataaaatatgtaaggtct--ggggttcaaatcccggccaccaccaaa 32559379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 32051590 - 32051518
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaa 162  Q
    ||||||||||||||||| ||||||| | ||||||||||| |||||  | |||||||||||||||||||||||||||    
T  32051590 agcttagctcagttggtttggacaa-tgcataatatatgcaaggt--ccggggttcaaaccccggccaccaccaaa 32051518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 12800950 - 12800885
Alignment:
Q  95 tcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||| ||||||||||||| |||||  | ||||||||||||||| ||||||||||||    
T  12800950 tcagttggtatggacaa-tacataatatatgcaaggt--ccggggttcaaaccccgaccaccaccaaaa 12800885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 27587224 - 27587297
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| |||||| | ||| ||||||| |||||  | ||||||||||||||||||||||||||||    
T  27587224 agcttagctcagttggtaaggacaa-tgcatgatatatgcaaggt--ccggggttcaaaccccggccaccaccaaaa 27587297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 12748913 - 12748977
Alignment:
Q  96 cagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||| | ||||||||||| |||||  | ||||||||||||||||||||||||||||    
T  12748913 cagttggtatggacaa-tgcataatatatgcaaggt--ccggggttcaaaccccggccaccaccaaaa 12748977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 37570809 - 37570739
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||| |||||||||||||| ||||||| ||||||||||||   ||||||||||||||| ||||||| ||||    
T  37570809 cttagctcggttggtatggacaa-tacataacatatgtaaggtt---ggggttcaaaccccgaccaccacaaaaa 37570739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 6235606 - 6235536
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||||| | | |||||||||||||||||  | ||| ||||||||||||||||||| ||||    
T  6235606 ttagctcagttggtatggacga-tgcataatatatgtaaggt--ccgggattcaaaccccggccaccacaaaaa 6235536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 19260634 - 19260564
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| ||||| |||| |||| | |||||||||||||||||  | ||||||||||||||||||||||||||||    
T  19260634 ttagcttagttgatatgtacaa-tgcataatatatgtaaggt--ccggggttcaaaccccggccaccaccaaaa 19260564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 3650523 - 3650596
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| ||||||||||| | | |||| ||||||||||||||||||   ||||||||||||||||||||||| ||||    
T  3650523 agcttaactcagttggta-gaaaaaatgcataatatatgtaaggttc--ggggttcaaaccccggccaccacaaaaa 3650596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 19163594 - 19163521
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||| ||| |||||| |||| ||||  || ||||||||||||||| ||||||| ||||    
T  19163594 agcttagctcagttggtatggac-aatgcataatttatgcaagg--tccggggttcaaaccccgaccaccacaaaaa 19163521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 7996943 - 7997011
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccac 158  Q
    ||||||||||||||||||||||| ||  ||||||||||| ||||  || ||||||||||||||| |||||||    
T  7996943 agcttagctcagttggtatggac-aacgcataatatatgcaagg--tctggggttcaaaccccgaccaccac 7997011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 8717530 - 8717466
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccacca 157  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||   |||||||||||| |||||||||    
T  8717530 ttagctcagttggtatggac-aatgcataatatatgcaaggtt--cggggttcaaacctcggccacca 8717466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 10982729 - 10982803
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| |||||||||||||||| |||| |||||||||| |||| ||||||| |  ||||||| |||||||||||||    
T  10982729 agcttaactcagttggtatggac-aatatataatatatgcaagg-ttcggggttcaaaacccccgccaccaccaaaa 10982803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 17898082 - 17898150
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccac 158  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||  || ||| ||| |||||||||||||||    
T  17898082 agcttaactcagttggtatggacaaa-acataatatatgcaagg--tccgggattctaaccccggccaccac 17898150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 6038331 - 6038260
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||  || || |||||||| ||||||||||| ||||    
T  6038331 cttagctcagttgatatggac-aatgcataatatatgtaagg--tctggagttcaaactccggccaccacaaaaa 6038260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 444416 - 444489
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||| |||||| |||||| | ||||||||||| |||||  | |||||| |||||||||||||||| ||||    
T  444416 agcttagctcaattggtaaggacaa-tgcataatatatgcaaggt--ccggggtttaaaccccggccaccacaaaaa 444489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 22775631 - 22775704
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||| ||||||| ||||||| | |||||| |||| |||||  | ||||||||||||| ||||||||||||||    
T  22775631 agcttagcttagttggtttggacaa-tgcataatttatgcaaggt--ccggggttcaaaccctggccaccaccaaaa 22775704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 24838224 - 24838155
Alignment:
Q  91 tagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||  |||||| | ||||| ||||| |||||  | ||||||||||||||||||||||||||||    
T  24838224 tagctcagttggttaggacaa-tgcataaaatatgcaaggt--ccggggttcaaaccccggccaccaccaaaa 24838155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 32421572 - 32421644
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| |||||||||||||||| |||| |||||||||| ||||  || |||||||||| ||||||||||| |||||    
T  32421572 agcttaactcagttggtatggac-aatatataatatatgcaagg--tccggggttcaaa-cccggccaccaacaaaa 32421644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 33373808 - 33373751
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaacccc 149  Q
    |||| |||||||||||||||| ||| ||||||||||||||||  || ||||||||||||||    
T  33373808 cttaactcagttggtatggac-aattcataatatatgtaagg--tctggggttcaaacccc 33373751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 35682750 - 35682706
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtt 132  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||||    
T  35682750 agcttagctcagttggtacggac-aatccataatatatgtaaggtt 35682706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 37141368 - 37141433
Alignment:
Q  95 tcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||| | ||||||||||| ||||||   ||||||||||| ||||||||||| ||||    
T  37141368 tcagttggtatggacaa-tgcataatatatgcaaggttc--ggggttcaaactccggccaccacgaaaa 37141433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 39821887 - 39821959
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| |||| ||| ||||||||||| ||||  || ||||||||||||| |||| |||||||||    
T  39821887 agcttagctcagttggtagggac-aatgcataatatatgcaagg--tctggggttcaaacccaggcc-ccaccaaaa 39821959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 40167325 - 40167398
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| |||||||||||||||| ||| ||||||||||  ||||||   ||| ||||||||||||||||||| ||||    
T  40167325 agcttaactcagttggtatggac-aatgcataatatatacaaggtt--cgggattcaaaccccggccaccacaaaaa 40167398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 8137938 - 8137998
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccg 150  Q
    ||||||||||||||||||||||| ||| ||||| ||||| || ||||  |||||||||||||||    
T  8137938 agcttagctcagttggtatggac-aatgcataaaatatgcaaagttt--ggggttcaaaccccg 8137998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 8704576 - 8704505
Alignment:
Q  88 gcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||| |||||||||| ||||||| |  |||||||||||||||||  |||||||| |||||| |||||||||||||    
T  8704576 gcttaactcagttggtgtggacaa-tgtataatatatgtaaggtt--gggggttctaacccc-gccaccaccaaaa 8704505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 9192276 - 9192212
Alignment:
Q  96 cagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||| |||| | |||||||||||||| || |  ||||||||||||||||||||||| ||||    
T  9192276 cagttggtatgaacaa-tgcataatatatgtaaagtct--ggggttcaaaccccggccaccacaaaaa 9192212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 30427734 - 30427777
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggt 131  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||    
T  30427734 agcttagctcagttggtatggac-aatgcataatatatgcaaggt 30427777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 10564520 - 10564450
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||||| ||||||||||||||||||||  || | ||||||||||||||| ||||| ||||    
T  10564520 ttagctcagttggtatggac-aatacataatatatgtaagg--tctgaggttcaaaccccggctaccacaaaaa 10564450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 28435303 - 28435233
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||||||| | ||||||||||| ||||||   |||||||||||||| |||||||||||||    
T  28435303 ttagctcagttggtatggacaa-tgcataatatatgcaaggttc--ggggttcaaaccccagccaccaccaaaa 28435233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 2888876 - 2888950
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| ||||||||  |||||||||| ||||  || | ||||||||||||||||||||| ||||    
T  2888876 agcttagctcagttggtagggacaaatgtataatatatgcaagg--tccgcggttcaaaccccggccaccacaaaaa 2888950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 5924652 - 5924725
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||  || |||||||||||| || ||||||||||||    
T  5924652 agcttagctcagttgctatggac-aatacataatatatggaagg--tccggggttcaaacctcgaccaccaccaaaa 5924725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 9946430 - 9946503
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||| ||| ||||| ||||| ||||  || ||||||||||||||| ||||||||||||    
T  9946430 agcttagctcagttggtatggac-aatgcataaaatatgcaagg--tccggggttcaaaccccgaccaccaccaaaa 9946503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 11949821 - 11949748
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||  || ||||||||||||||| ||||||| ||||    
T  11949821 agcttagctcagttggtatggac-aatgcataatatatgcaagg--tccggggttcaaaccccgaccaccacaaaaa 11949748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 43034400 - 43034327
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| |||||||||||||||||| | ||||||||||| ||||| |  | ||||||||||||||||||||||||||    
T  43034400 agcttaactcagttggtatggacaa-tgcataatatatgcaaggtct--gaggttcaaaccccggccaccaccaaaa 43034327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 155
Target Start/End: Complemental strand, 47814309 - 47814244
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccac 155  Q
    ||||||||||||||||||||||| || |||||||||||| ||||  || ||||||||||||||||||||    
T  47814309 agcttagctcagttggtatggac-aacacataatatatgcaagg--tccggggttcaaaccccggccac 47814244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 23809952 - 23810020
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccac 158  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||    ||||||||||||||||||||||    
T  23809952 agcttagctcagttggtatggacaaa-gcataatatatgcaaggtt--cagggttcaaaccccggccaccac 23810020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 8464133 - 8464088
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggttt 133  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||    
T  8464133 agcttagctcagttggtaaggacaa-tacataatatatgtaaggttt 8464088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 3936630 - 3936703
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||||| || ||| ||||||||||| ||||  || ||||||| ||||||||||||||| ||||    
T  3936630 agcttagctcagttggtatgaac-aatgcataatatatgcaagg--tccggggttcgaaccccggccaccacaaaaa 3936703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 7230283 - 7230356
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| |||| ||| ||||||||||| ||||  || |||||||||||| |||||||||| ||||    
T  7230283 agcttagctcagttggtaaggac-aatgcataatatatgcaagg--tccggggttcaaacctcggccaccacaaaaa 7230356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 10204843 - 10204887
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtt 132  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  10204843 agcttagctcagttggtatggac-aatgcataatatatgtaaggtt 10204887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 20383491 - 20383564
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||  || ||||||||||||||  ||||||| ||||    
T  20383491 agcttagctcagttggtatggac-aatgcataatatatgcaagg--tccggggttcaaaccccatccaccacaaaaa 20383564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 20799452 - 20799379
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| |||| ||| ||||||||||| ||||  || ||||||||||||| || |||||||||||    
T  20799452 agcttagctcagttggtagggac-aatgcataatatatgcaagg--tccggggttcaaaccctggtcaccaccaaaa 20799379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 22411771 - 22411840
Alignment:
Q  91 tagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||| ||| ||||||||||||||||||   ||||||||||| |  |||||||||||||    
T  22411771 tagctcagttggtatggac-aatgcataatatatgtaaggtt--cggggttcaaactctagccaccaccaaaa 22411840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 16431621 - 16431692
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||| ||| ||||| ||||| ||||  || |||||||||||||||||| |||| ||||    
T  16431621 cttagctcagttggtatggac-aatgcataaaatatgcaagg--tctggggttcaaaccccggcctccacaaaaa 16431692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 56551648 - 56551577
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||| |||||| | ||||||||||| |||||  | | ||||||||||||||||||||| ||||    
T  56551648 cttagctcagttggtaaggacaa-tgcataatatatgcaaggt--ccgaggttcaaaccccggccaccacaaaaa 56551577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 54294482 - 54294411
Alignment:
Q  87 agcttagctcagttggtatggacaaa-tacataatatatgtaaggtttcgggggttcaaaccccggccaccacc 159  Q
    |||||||||||||||||  ||||||| | ||||||||||| |||||  | |||||||||||||||| |||||||    
T  54294482 agcttagctcagttggttgggacaaaatgcataatatatgcaaggt--ccggggttcaaaccccggacaccacc 54294411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 897431 - 897500
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaa 162  Q
    |||||||||||||||||||| |||  |||||||||||||||  || |||||||||||||| | || |||||||    
T  897431 ttagctcagttggtatggac-aatgtataatatatgtaagg--tccggggttcaaacccctgtcagcaccaaa 897500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 4916160 - 4916225
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccacca 157  Q
    ||||||||||||||| || |||| | ||||||||||||||| |||  ||||||||||||| ||||||||    
T  4916160 cttagctcagttggtttgaacaa-tgcataatatatgtaagattt--ggggttcaaaccctggccacca 4916225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 14541907 - 14541863
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtt 132  Q
    |||||||||||||||||||||||||| |||| ||||||| ||||||    
T  14541907 agcttagctcagttggtatggacaaa-acatgatatatgcaaggtt 14541863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 19588157 - 19588230
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||| ||||||||||||| | ||||| ||||| |||||  |  |||||||||||||||||||||| ||||    
T  19588157 agcttagctcaattggtatggacaa-tgcataaaatatgcaaggt--ccagggttcaaaccccggccaccacaaaaa 19588230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 23247656 - 23247583
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||| |||||||||||| ||  ||||||||||| ||||  || |||||| |||||||||||||||| ||||    
T  23247656 agcttagctcggttggtatggac-aacgcataatatatgcaagg--tctggggtttaaaccccggccaccacaaaaa 23247583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 23304074 - 23304001
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||| |||| ||  ||||||||||| ||||  || ||||| | ||||||||||||||||||||    
T  23304074 agcttagctcagttggtagggac-aaggcataatatatgcaagg--tccggggtgcgaaccccggccaccaccaaaa 23304001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 24665049 - 24664976
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||  ||| ||||||||||| ||||  || ||||||| ||||||| ||||||| ||||    
T  24665049 agcttagctcagttggtatgga-gaatgcataatatatgcaagg--tccggggttcgaaccccgaccaccacaaaaa 24664976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 35287565 - 35287492
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||||||| || ||| ||||| ||||| ||||  || ||||||| ||||||||||||||| ||||    
T  35287565 agcttagctcagttggtatgaac-aatgcataaaatatgcaagg--tccggggttccaaccccggccaccacaaaaa 35287492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 36478994 - 36479038
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtt 132  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||||    
T  36478994 agcttagctctgttggtatggac-aatgcataatatatgtaaggtt 36479038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 38340378 - 38340334
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtt 132  Q
    |||||| |||||||||||||||| ||||||||| ||||||||||||    
T  38340378 agcttaactcagttggtatggac-aatacataaaatatgtaaggtt 38340334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 38453268 - 38453341
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||||||||| |||||| ||| ||||||||||| ||||  ||  |||||| |||||| |||||||||||||    
T  38453268 agcttagctcagttggcatggac-aatgcataatatatgcaagg--tccagggttcgaaccccagccaccaccaaaa 38453341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 54857673 - 54857600
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||||||| ||||||||  |||| | ||||| ||||| |||||  | ||||||||||||||||||||||||||||    
T  54857673 agcttagctcggttggtataaacaa-tgcataaaatatgcaaggt--ccggggttcaaaccccggccaccaccaaaa 54857600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 56497666 - 56497593
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||| |||||| |||||| | ||||||||||| ||||| |  ||||||| || |||||||||||||||||    
T  56497666 agcttagctcaattggtaaggacaa-tgcataatatatgcaaggtct--ggggttcgaatcccggccaccaccaaaa 56497593  T

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Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 2186391 - 2186348
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggt 131  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||    
T  2186391 agcttagctcagttggtatggac-aatgcataatatatgcaaggt 2186348  T

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Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 9783907 - 9783975
Alignment:
Q  92 agctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||| ||||| ||||||||| | ||||||||||||||||| |  | |||||||||| |||||||||||||||    
T  9783907 agcttagttgatatggacaa-tgcataatatatgtaaggtct--gaggttcaaacctcggccaccaccaaaa 9783975  T

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Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 12322676 - 12322744
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccac 158  Q
    |||||||||||||||||| |||| ||| ||||||||||| |||  ||| |||||||||||| | ||||||||    
T  12322676 agcttagctcagttggtacggac-aatgcataatatatgcaag--ttccggggttcaaacctcagccaccac 12322744  T

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Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 16304153 - 16304089
Alignment:
Q  90 ttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccacca 157  Q
    |||||||||||||||||||| ||| ||||||||||| ||||  || ||| |||||||| |||||||||    
T  16304153 ttagctcagttggtatggac-aatgcataatatatgcaagg--tccgggattcaaaccgcggccacca 16304089  T

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Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 51458681 - 51458724
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggt 131  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||    
T  51458681 agcttagctcagttggtatggac-aatacataaaatatgcaaggt 51458724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 52270088 - 52270045
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggt 131  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||    
T  52270088 agcttagctcagttggtatggac-aatgcataatatatgcaaggt 52270045  T

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Target: scaffold0735 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 1531 - 1604
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||| ||| ||||| ||||| ||||  || ||||||| |||||| |||||||||||||    
T  1531 agcttagctcagttggtatggac-aatgcataaaatatgcaagg--tccggggttcgaacccccgccaccaccaaaa 1604  T

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Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 161144 - 161217
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| |||||||||||||||||| | ||||| ||||| ||||||   ||||||||||||||| ||||||||||||    
T  161144 agcttaactcagttggtatggacaa-tgcataaaatatgcaaggttc--ggggttcaaaccccgaccaccaccaaaa 161217  T

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Target: scaffold0350 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 1253 - 1324
Alignment:
Q  89 cttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||  || || |||||||| ||||||||||| ||||    
T  1253 cttagctcagttgatatggac-aatgcataatatatgtaagg--tctggagttcaaactccggccaccacaaaaa 1324  T

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Target: scaffold0118 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 40001 - 40045
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtt 132  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  40001 agcttagctcagttggtatggac-aatgcataatatatgcaaggtt 40045  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 61628 - 61555
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    |||||| ||||||||||| ||| || | |||||| ||||||||||  |  |||||||||||||||||||||||||||    
T  61628 agcttaactcagttggtaaggataa-tgcataatgtatgtaaggt--ccagggttcaaaccccggccaccaccaaaa 61555  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 185266 - 185339
Alignment:
Q  87 agcttagctcagttggtatggacaaatacataatatatgtaaggtttcgggggttcaaaccccggccaccaccaaaa 163  Q
    ||||||||||||||||||||||| ||| ||||| ||||| |||   || |||||||||||||||| ||||| |||||    
T  185266 agcttagctcagttggtatggac-aatgcataaaatatgcaag--atccggggttcaaaccccggtcaccatcaaaa 185339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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