View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1591_high_12 (Length: 236)

Name: NF1591_high_12
Description: NF1591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1591_high_12
NF1591_high_12
[»] chr8 (38 HSPs)
chr8 (1-222)||(2627609-2627828)
chr8 (94-217)||(17982525-17982647)
chr8 (94-217)||(31218129-31218251)
chr8 (85-211)||(3439389-3439515)
chr8 (94-217)||(19945534-19945656)
chr8 (94-219)||(1746392-1746516)
chr8 (1-211)||(25689840-25690046)
chr8 (94-217)||(44303726-44303848)
chr8 (94-217)||(43036295-43036418)
chr8 (94-217)||(12702812-12702934)
chr8 (94-217)||(42498066-42498188)
chr8 (94-217)||(34254503-34254624)
chr8 (94-219)||(33352020-33352145)
chr8 (94-217)||(4731530-4731653)
chr8 (94-217)||(15212658-15212781)
chr8 (94-217)||(34256679-34256800)
chr8 (94-207)||(6598854-6598967)
chr8 (94-207)||(6674307-6674420)
chr8 (124-217)||(30143214-30143306)
chr8 (85-211)||(15290410-15290533)
chr8 (85-211)||(15470779-15470902)
chr8 (133-217)||(19948534-19948617)
chr8 (85-211)||(42575483-42575606)
chr8 (94-216)||(3303843-3303965)
chr8 (120-211)||(4733687-4733777)
chr8 (94-219)||(27811148-27811273)
chr8 (94-207)||(41365020-41365133)
chr8 (94-216)||(5689144-5689266)
chr8 (124-207)||(10015030-10015112)
chr8 (94-207)||(10929683-10929794)
chr8 (94-186)||(4162403-4162495)
chr8 (94-179)||(4743376-4743461)
chr8 (94-205)||(1345544-1345655)
chr8 (94-207)||(1292636-1292749)
chr8 (94-186)||(41366787-41366879)
chr8 (94-216)||(18141693-18141816)
chr8 (98-216)||(8153634-8153753)
chr8 (94-153)||(40321015-40321075)
[»] chr4 (41 HSPs)
chr4 (1-222)||(31495392-31495611)
chr4 (7-217)||(13992373-13992582)
chr4 (94-217)||(5429551-5429674)
chr4 (94-217)||(56178810-56178932)
chr4 (94-217)||(48142914-48143037)
chr4 (94-217)||(37740498-37740620)
chr4 (95-217)||(9927632-9927753)
chr4 (85-211)||(5135950-5136074)
chr4 (94-217)||(52082830-52082953)
chr4 (94-217)||(52095535-52095658)
chr4 (85-211)||(7122568-7122693)
chr4 (85-211)||(7124787-7124912)
chr4 (94-217)||(29999979-30000101)
chr4 (85-211)||(5138176-5138299)
chr4 (85-211)||(8395491-8395614)
chr4 (94-217)||(12739723-12739846)
chr4 (94-217)||(12747929-12748052)
chr4 (94-216)||(54200079-54200201)
chr4 (94-207)||(5871702-5871815)
chr4 (94-207)||(13009604-13009717)
chr4 (94-211)||(34570587-34570704)
chr4 (94-217)||(26175809-26175932)
chr4 (94-217)||(5370260-5370382)
chr4 (85-211)||(8393282-8393405)
chr4 (138-217)||(52093882-52093960)
chr4 (94-207)||(47038582-47038695)
chr4 (94-217)||(12745609-12745732)
chr4 (94-211)||(29254372-29254489)
chr4 (94-216)||(24968984-24969107)
chr4 (94-216)||(52467527-52467650)
chr4 (94-217)||(36994397-36994519)
chr4 (120-207)||(3909989-3910075)
chr4 (94-143)||(35369614-35369665)
chr4 (133-216)||(6677340-6677423)
chr4 (157-216)||(37229972-37230031)
chr4 (145-216)||(37755149-37755220)
chr4 (157-216)||(45687432-45687491)
chr4 (157-216)||(46147591-46147650)
chr4 (97-211)||(51336941-51337056)
chr4 (94-211)||(6542354-6542472)
chr4 (94-133)||(33089833-33089873)
[»] chr7 (49 HSPs)
chr7 (1-221)||(43504230-43504448)
chr7 (1-222)||(39731243-39731461)
chr7 (94-218)||(48408673-48408797)
chr7 (85-211)||(24789726-24789852)
chr7 (1-220)||(20343773-20343988)
chr7 (94-217)||(24514934-24515056)
chr7 (94-217)||(4178647-4178769)
chr7 (94-222)||(29990922-29991049)
chr7 (94-217)||(35853787-35853909)
chr7 (94-217)||(25767131-25767250)
chr7 (94-217)||(1113529-1113652)
chr7 (94-217)||(43864116-43864239)
chr7 (85-222)||(1562162-1562296)
chr7 (94-217)||(23554912-23555034)
chr7 (94-207)||(38671395-38671508)
chr7 (85-211)||(32060482-32060607)
chr7 (85-211)||(6592498-6592621)
chr7 (85-211)||(6594716-6594839)
chr7 (94-217)||(14070006-14070129)
chr7 (94-217)||(14380034-14380157)
chr7 (85-211)||(18388918-18389041)
chr7 (85-211)||(18392354-18392477)
chr7 (94-217)||(47676309-47676432)
chr7 (94-216)||(19502051-19502172)
chr7 (94-219)||(31733142-31733267)
chr7 (94-222)||(4586028-4586156)
chr7 (120-217)||(48489303-48489399)
chr7 (94-209)||(4538713-4538828)
chr7 (94-217)||(48491451-48491574)
chr7 (98-211)||(18126522-18126635)
chr7 (94-207)||(26417198-26417311)
chr7 (94-217)||(30024905-30025028)
chr7 (94-217)||(47674116-47674239)
chr7 (94-207)||(25615745-25615858)
chr7 (94-207)||(41649183-41649295)
chr7 (94-217)||(2761475-2761598)
chr7 (133-216)||(23343847-23343929)
chr7 (94-216)||(24526070-24526192)
chr7 (94-207)||(31105566-31105679)
chr7 (120-207)||(496183-496269)
chr7 (94-216)||(4253702-4253825)
chr7 (94-153)||(41317607-41317667)
chr7 (157-216)||(12098108-12098167)
chr7 (157-216)||(41317683-41317742)
chr7 (121-207)||(6570476-6570561)
chr7 (94-207)||(31518677-31518790)
chr7 (120-157)||(9235410-9235447)
chr7 (94-153)||(8153277-8153337)
chr7 (94-153)||(12098032-12098092)
[»] chr6 (29 HSPs)
chr6 (1-211)||(3072835-3073043)
chr6 (1-222)||(411976-412194)
chr6 (94-217)||(2171704-2171827)
chr6 (17-211)||(6097531-6097724)
chr6 (1-222)||(27647737-27647952)
chr6 (94-217)||(5406372-5406494)
chr6 (94-217)||(5410697-5410819)
chr6 (1-222)||(16554744-16554960)
chr6 (1-222)||(16631300-16631516)
chr6 (94-217)||(5413566-5413688)
chr6 (94-217)||(16452503-16452625)
chr6 (94-217)||(9183204-9183327)
chr6 (94-217)||(31404847-31404970)
chr6 (1-222)||(16578595-16578811)
chr6 (1-222)||(16616569-16616785)
chr6 (1-222)||(16652987-16653203)
chr6 (85-211)||(25421191-25421316)
chr6 (94-217)||(30834710-30834832)
chr6 (95-219)||(33160527-33160652)
chr6 (85-211)||(6027134-6027257)
chr6 (85-211)||(33342264-33342387)
chr6 (94-207)||(26954458-26954571)
chr6 (94-207)||(16567088-16567201)
chr6 (94-207)||(28137581-28137694)
chr6 (120-217)||(33211385-33211481)
chr6 (85-211)||(34164744-34164867)
chr6 (85-211)||(34166966-34167089)
chr6 (94-207)||(16568925-16569038)
chr6 (94-158)||(3039076-3039141)
[»] chr3 (52 HSPs)
chr3 (1-211)||(800976-801184)
chr3 (94-222)||(23200310-23200438)
chr3 (94-222)||(23198111-23198239)
chr3 (1-221)||(6716375-6716591)
chr3 (1-222)||(54634999-54635216)
chr3 (85-221)||(6718559-6718695)
chr3 (92-222)||(9636298-9636428)
chr3 (94-217)||(5258318-5258440)
chr3 (92-217)||(5260495-5260619)
chr3 (94-217)||(45095037-45095159)
chr3 (85-211)||(45282868-45282994)
chr3 (85-221)||(25637304-25637437)
chr3 (150-223)||(7782370-7782443)
chr3 (94-217)||(5236629-5236752)
chr3 (95-211)||(7762144-7762259)
chr3 (94-217)||(40735255-40735378)
chr3 (94-209)||(51398694-51398809)
chr3 (85-211)||(3617335-3617460)
chr3 (94-217)||(7764340-7764462)
chr3 (1-133)||(7780080-7780208)
chr3 (94-217)||(37408331-37408453)
chr3 (85-211)||(4600903-4601026)
chr3 (100-216)||(32744606-32744721)
chr3 (94-207)||(760729-760842)
chr3 (94-207)||(9581165-9581278)
chr3 (94-207)||(39153534-39153647)
chr3 (85-211)||(4598682-4598805)
chr3 (85-211)||(10209061-10209184)
chr3 (85-211)||(10211281-10211404)
chr3 (94-209)||(40734378-40734493)
chr3 (95-217)||(29810740-29810862)
chr3 (94-207)||(19684062-19684175)
chr3 (94-207)||(26386654-26386767)
chr3 (94-207)||(29682241-29682354)
chr3 (85-211)||(10056105-10056228)
chr3 (85-211)||(10058327-10058450)
chr3 (85-211)||(10060549-10060672)
chr3 (85-211)||(10062771-10062894)
chr3 (85-211)||(10064993-10065116)
chr3 (85-211)||(10067215-10067338)
chr3 (94-207)||(22835175-22835288)
chr3 (124-217)||(29812935-29813027)
chr3 (94-217)||(53921676-53921799)
chr3 (94-206)||(16498913-16499025)
chr3 (155-216)||(2075304-2075364)
chr3 (94-164)||(44331470-44331540)
chr3 (94-195)||(32890997-32891098)
chr3 (94-217)||(23410502-23410626)
chr3 (121-216)||(5373096-5373191)
chr3 (94-216)||(9666640-9666763)
chr3 (157-216)||(29196637-29196696)
chr3 (94-153)||(31314380-31314440)
[»] chr5 (41 HSPs)
chr5 (1-222)||(9789300-9789518)
chr5 (1-222)||(18441724-18441942)
chr5 (1-222)||(26177757-26177974)
chr5 (1-222)||(16409349-16409567)
chr5 (17-222)||(26170648-26170850)
chr5 (1-222)||(29720238-29720456)
chr5 (1-222)||(29751236-29751454)
chr5 (1-222)||(29722398-29722616)
chr5 (94-217)||(36074218-36074340)
chr5 (94-217)||(13342933-13343055)
chr5 (94-217)||(30182461-30182583)
chr5 (94-217)||(25412634-25412756)
chr5 (85-222)||(10593133-10593269)
chr5 (1-211)||(22536366-22536570)
chr5 (94-217)||(28750828-28750951)
chr5 (94-217)||(39468722-39468845)
chr5 (94-222)||(13239619-13239746)
chr5 (85-211)||(25078006-25078131)
chr5 (85-211)||(25135975-25136100)
chr5 (94-217)||(30683094-30683216)
chr5 (94-207)||(31182855-31182968)
chr5 (94-217)||(13488075-13488198)
chr5 (85-211)||(16544295-16544418)
chr5 (86-211)||(16546517-16546639)
chr5 (94-217)||(533641-533764)
chr5 (96-207)||(3075833-3075944)
chr5 (85-211)||(40379978-40380101)
chr5 (85-211)||(40382189-40382312)
chr5 (94-217)||(42428603-42428726)
chr5 (94-211)||(537903-538020)
chr5 (94-207)||(5887589-5887702)
chr5 (94-211)||(42426408-42426525)
chr5 (94-207)||(16451963-16452075)
chr5 (95-211)||(32636702-32636818)
chr5 (95-207)||(33831562-33831674)
chr5 (94-216)||(42926766-42926888)
chr5 (94-207)||(8566119-8566233)
chr5 (133-211)||(42310148-42310225)
chr5 (178-222)||(16407913-16407957)
chr5 (120-178)||(19806295-19806352)
chr5 (95-152)||(37439070-37439127)
[»] chr2 (30 HSPs)
chr2 (1-219)||(32289442-32289656)
chr2 (1-222)||(4484406-4484632)
chr2 (1-218)||(6266569-6266783)
chr2 (94-217)||(36205837-36205959)
chr2 (94-217)||(45099627-45099749)
chr2 (1-219)||(30833215-30833438)
chr2 (94-217)||(4503306-4503428)
chr2 (94-217)||(36988249-36988371)
chr2 (94-217)||(2334591-2334713)
chr2 (94-217)||(5723428-5723550)
chr2 (94-217)||(39284757-39284880)
chr2 (94-207)||(42362234-42362347)
chr2 (85-211)||(12647544-12647667)
chr2 (94-207)||(723917-724030)
chr2 (94-207)||(11151764-11151877)
chr2 (94-207)||(11690383-11690496)
chr2 (94-207)||(34139944-34140057)
chr2 (94-217)||(38312112-38312235)
chr2 (94-216)||(36318182-36318304)
chr2 (94-217)||(6595180-6595302)
chr2 (94-216)||(29867742-29867864)
chr2 (94-207)||(14633999-14634112)
chr2 (94-222)||(17057542-17057670)
chr2 (94-222)||(17085525-17085653)
chr2 (120-216)||(33162650-33162745)
chr2 (120-207)||(14202607-14202693)
chr2 (94-167)||(24885583-24885656)
chr2 (94-153)||(36773497-36773557)
chr2 (157-216)||(36773422-36773481)
chr2 (134-211)||(41586324-41586401)
[»] scaffold0491 (2 HSPs)
scaffold0491 (1-222)||(11237-11463)
scaffold0491 (1-222)||(8811-9037)
[»] chr1 (42 HSPs)
chr1 (1-222)||(40282251-40282469)
chr1 (45-222)||(9987076-9987251)
chr1 (85-222)||(21053832-21053969)
chr1 (94-222)||(51765262-51765389)
chr1 (23-211)||(20622335-20622521)
chr1 (94-217)||(20762544-20762666)
chr1 (1-216)||(9036298-9036508)
chr1 (94-219)||(3156736-3156860)
chr1 (94-217)||(3189203-3189325)
chr1 (94-217)||(3198020-3198142)
chr1 (94-217)||(3206859-3206981)
chr1 (120-217)||(13316518-13316614)
chr1 (94-217)||(28223594-28223717)
chr1 (94-217)||(31659110-31659233)
chr1 (95-217)||(28220400-28220522)
chr1 (94-217)||(10925095-10925218)
chr1 (85-211)||(44203519-44203642)
chr1 (94-207)||(197081-197194)
chr1 (94-207)||(3847294-3847407)
chr1 (94-217)||(1833394-1833517)
chr1 (94-216)||(13138147-13138269)
chr1 (94-216)||(15820180-15820302)
chr1 (94-207)||(834340-834453)
chr1 (94-211)||(44455038-44455155)
chr1 (94-217)||(37503727-37503850)
chr1 (94-217)||(49918221-49918345)
chr1 (94-207)||(8550960-8551073)
chr1 (94-206)||(4552810-4552922)
chr1 (94-206)||(13659509-13659621)
chr1 (120-216)||(23555465-23555560)
chr1 (94-217)||(37560042-37560165)
chr1 (94-207)||(928150-928264)
chr1 (94-216)||(50169383-50169505)
chr1 (120-217)||(30476648-30476744)
chr1 (94-153)||(50167348-50167408)
chr1 (157-216)||(28265802-28265861)
chr1 (94-216)||(45644528-45644650)
chr1 (94-216)||(46064791-46064913)
chr1 (157-216)||(50167424-50167483)
chr1 (94-153)||(28265727-28265787)
chr1 (120-216)||(40122398-40122493)
chr1 (1-37)||(51765453-51765489)
[»] scaffold1519 (1 HSPs)
scaffold1519 (94-217)||(789-911)
[»] scaffold0002 (1 HSPs)
scaffold0002 (94-217)||(434405-434527)
[»] scaffold0137 (1 HSPs)
scaffold0137 (85-221)||(6150-6283)
[»] scaffold0674 (1 HSPs)
scaffold0674 (85-211)||(3884-4007)
[»] scaffold0565 (1 HSPs)
scaffold0565 (85-211)||(2762-2885)
[»] scaffold0286 (2 HSPs)
scaffold0286 (147-217)||(22216-22286)
scaffold0286 (94-144)||(11502-11552)
[»] scaffold0066 (1 HSPs)
scaffold0066 (100-217)||(20594-20711)
[»] scaffold0006 (1 HSPs)
scaffold0006 (94-206)||(149270-149382)
[»] scaffold0016 (2 HSPs)
scaffold0016 (94-153)||(114538-114597)
scaffold0016 (157-217)||(114462-114522)


Alignment Details
Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 2627828 - 2627609
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaagac 99  Q
    ||||| ||||||||||||||||||| |||||||||||||  ||| ||||||||||||||| ||| ||||||| ||||| | ||||  |||| ||||||||    
T  2627828 ttacacaagagatacaaaaagagttgcaagaaattagatt-tgacaagttcacaatgaacaaccctaatttctacccttttccca--atctcaccaagac 2627732  T
Q  100 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttc 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2627731 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttc 2627632  T
Q  200 ccaagtttctctttcttccaact 222  Q
    |||||||||||| ||||||||||    
T  2627631 ccaagtttctctctcttccaact 2627609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 17982647 - 17982525
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| |||||||||| |||| || |||||    
T  17982647 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctaaaccctaaagttgcttccttt 17982549  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  17982548 gatttcccaagtttctctctcttc 17982525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 31218251 - 31218129
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| |||||||||| |||| || |||||    
T  31218251 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctaaaccctaaagttgcttccttt 31218153  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  31218152 gatttcccaagtttctctctcttc 31218129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 3439515 - 3439389
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| ||||||||||||||||||||||||| | |||||||||||||||||||  ||||||||||||  |||||||||||| || ||||||||||||||    
T  3439515 caatctcaccaagacactcaatgattttctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagt 3439417  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | |||||||||||||| ||||| |||||    
T  3439416 ttctccctttgatttctcaagtctctct 3439389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 19945534 - 19945656
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||| ||||||||||| ||||||||||||||||||||||||| |||| || |||||    
T  19945534 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccgacccaagagaa-ctctaatcaaagactctaaaccctaaagttgcttccttt 19945632  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||| ||| |||||    
T  19945633 gatttcccaagtttgtctctcttc 19945656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 94 - 219
Target Start/End: Original strand, 1746392 - 1746516
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||| ||||||| |||||||||| ||| |||||||||| |||| || |||||    
T  1746392 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaaccaaagagaa-ctctaatcaaggaccctaaaccctaaagttgcttccttt 1746490  T
Q  194 gatttcccaagtttctctttcttcca 219  Q
    |||||||||||||||||| |||||||    
T  1746491 gatttcccaagtttctctctcttcca 1746516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 25690046 - 25689840
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacga-ccataatttcgaccctctgcccacaatctaaccaaga 98  Q
    ||||||||| ||||||||| |  |||||||||||||| |  ||| ||||||||||||||| | || ||||||| ||| | | ||||  |||| |||||||    
T  25690046 ttacaaaagggatacaaaagg--ttacaagaaattagct--tgacaagttcacaatgaacaaaccctaatttctacctttttccca--atctcaccaaga 25689953  T
Q  99 cactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagttactccctttgatt 197  Q
    |||||||||||| ||||| | |||||||||||||||||||  ||||||||||||  |||||||||||| || ||||||||||||| | ||||||||||||    
T  25689952 cactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagcttctccctttgatt 25689854  T
Q  198 tcccaagtttctct 211  Q
    |||||||| |||||    
T  25689853 tcccaagtctctct 25689840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 44303848 - 44303726
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| |||||||||| ||||  | |||||    
T  44303848 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctaaaccctaaagttgtttccttt 44303750  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||| ||||||||||| |||||    
T  44303749 gatttctcaagtttctctctcttc 44303726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 43036418 - 43036295
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  43036418 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 43036320  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  43036319 tgatttcccaagtttctctctcttc 43036295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 12702812 - 12702934
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    ||||||||| |||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| | ||||  |||||    
T  12702812 caagacacttaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaatttacctccttt 12702910  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  12702911 gatttcccaagtttctctctcttc 12702934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 42498188 - 42498066
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | | ||||||||||||||||||| || ||||||||||| || ||||||| ||||||  |||||    
T  42498188 caagacactcaatgattttcactcaccaaggtgtttacaacgtttcccaacccaagagaa-ctttaatcaaagaccctcaaccctaaagttacctccttt 42498090  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  42498089 gatttcccaagtttctctctcttc 42498066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 34254503 - 34254624
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | |||| ||| |||||||||||| |||||||||||||| |||||||||| |||| |  |||||    
T  34254503 caagacactcaatgattttcactcaccaaggtgtttacaatgtctcc-aacccaagagaa-ctctaatcaaagaccctaaaccctaaagttgcctccttt 34254600  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  34254601 gatttcccaagtttctctctcttc 34254624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 94 - 219
Target Start/End: Complemental strand, 33352145 - 33352020
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||||||||||||||||||  ||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||   |||    
T  33352145 caagacactcaatgattttcaatcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttaccttctt 33352047  T
Q  193 tgatttcccaagtttctctttcttcca 219  Q
    ||||||||||||||||||| |||||||    
T  33352046 tgatttcccaagtttctctctcttcca 33352020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 4731653 - 4731530
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  4731653 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 4731555  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||  ||||||||||| |||||    
T  4731554 tgatttttcaagtttctctctcttc 4731530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 15212781 - 15212658
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||||| |||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  | ||    
T  15212781 caagacattcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcatt 15212683  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  15212682 tgatttcccaagtttctctctcttc 15212658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 34256679 - 34256800
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| | |  |||||||||| | |||||||| ||||||||| || |||||||||||||| |||||||||| |||| |  |||||    
T  34256679 caagacactcaatgattttcacacaccaaggtgtttacaatgtttcc-aacccaagataa-ctctaatcaaagaccctaaaccctaaagttgcctccttt 34256776  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||| |||||||||    
T  34256777 gatttcccaagtttatctttcttc 34256800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 6598967 - 6598854
Alignment:
Q  94 caagacactcaatgattttctctct-tcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||||||| |||||||||| |||  ||||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| |||||   ||||    
T  6598967 caagacacttaatgattttcactcactcaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttatctcctt 6598869  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  6598868 tgatttcccaagttt 6598854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 6674420 - 6674307
Alignment:
Q  94 caagacactcaatgattttctctct-tcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||||||| |||||||||| |||  ||||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| |||||   ||||    
T  6674420 caagacacttaatgattttcactcactcaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttatctcctt 6674322  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  6674321 tgatttcccaagttt 6674307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 30143306 - 30143214
Alignment:
Q  124 gtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttcttc 217  Q
    |||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||||||||||||||||||||| |||||    
T  30143306 gtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 30143214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 15290533 - 15290410
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||||  |||||||||||   |||||||||||| || |||||||||||||     
T  15290533 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccaagaggtactctaatcaaagaaccctaaaccctagagc 15290437  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    |  ||||||||||||||||||| |||||    
T  15290436 t-ttccctttgatttcccaagtctctct 15290410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 15470902 - 15470779
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||||  |||||||||||   |||||||||||| || |||||||||||||     
T  15470902 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccaagaggtactctaatcaaagaaccctaaaccctagagc 15470806  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    |  ||||||||||||||||||| |||||    
T  15470805 t-ttccctttgatttcccaagtctctct 15470779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 19948534 - 19948617
Alignment:
Q  133 atgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttcttc 217  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||| |||||    
T  19948534 atgtttcccaactcaaaagaa-ctctaatcaaagactctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttc 19948617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 42575483 - 42575606
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||  |||||||| |||||||||||||||||||  |||||||||||   |||||||||||| || |||||||||||||     
T  42575483 caatctcaccaagacactcaatga--ttctctctacaaggtgtttcccatgttt-tcaacccaagaggtactctaatcaaagaaccctaaaccctagagc 42575579  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    |  ||||||||||||||||||| |||||    
T  42575580 t-ttccctttgatttcccaagtctctct 42575606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 3303843 - 3303965
Alignment:
Q  94 caagacactcaatgattttctctct-tcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||| |||||||||||||| |||  ||||||||||| | ||||||||||||||||||||| | |||||||||||| || |||| || ||||||  ||||    
T  3303843 caagatactcaatgattttcactcactcaaggtgtttacaatgtttcccaacccaagagaacc-ctaatcaaagaccctcaaccgtaaagttacctcctt 3303941  T
Q  193 tgatttcccaagtttctctttctt 216  Q
    ||||||||||||||| ||| ||||    
T  3303942 tgatttcccaagtttttctctctt 3303965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 4733777 - 4733687
Alignment:
Q  120 caaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctct 211  Q
    |||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  | |||||||||||||||||||||    
T  4733777 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcttttgatttcccaagtttctct 4733687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 219
Target Start/End: Complemental strand, 27811273 - 27811148
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | |||||| |||||| ||||||| |||||||||||||| || ||||||| | ||||  ||||    
T  27811273 caagacactcaatgattttcactcacccaaggtgtttacaatgttttccaacctaagagaa-ctctaatcaaagaccctcaaccctaaatttacctcctt 27811175  T
Q  193 tgatttcccaagtttctctttcttcca 219  Q
    ||||||||||| ||||||| |||||||    
T  27811174 tgatttcccaattttctctctcttcca 27811148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 41365020 - 41365133
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | |||||||||||||||| |||| |||||||||||||| || ||||||| ||||||  | ||    
T  41365020 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaaaagaa-ctctaatcaaagaccctcaaccctaaagttacctcatt 41365118  T
Q  193 tgatttcccaagttt 207  Q
    ||||||| |||||||    
T  41365119 tgatttcacaagttt 41365133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 5689266 - 5689144
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | |||||||| ||| |||||||| | |||||||||||| || ||||||| |||||   ||||    
T  5689266 caagacactcaatgattttcactcacccaaggtgtttacaatgtttccaaactcaagagaacc-ctaatcaaagaccctcaaccctaaagttatctcctt 5689168  T
Q  193 tgatttcccaagtttctctttctt 216  Q
    ||||||||| ||||||||| ||||    
T  5689167 tgatttccctagtttctctctctt 5689144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 207
Target Start/End: Complemental strand, 10015112 - 10015030
Alignment:
Q  124 gtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagttt 207  Q
    |||||| | ||||||||||||||||||||| |||||||||||||| || |||| || ||||||  |||||||||||||||||||    
T  10015112 gtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 10015030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 10929794 - 10929683
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| ||  || ||||||||| | ||||| ||||||||||||||| |||||||||||||| | || ||||| ||||||  ||||    
T  10929794 caagacactcaatgattttcactaatccaaggtgtttacaatgtt-cccaacccaagagaa-ctctaatcaaagaccccaa-ccctaaagttacctcctt 10929698  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  10929697 tgatttcccaagttt 10929683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 4162495 - 4162403
Alignment:
Q  94 caagacactcaatgattttctctct-tcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttac 186  Q
    |||||||||||||||||||| |||  ||||||||||| | |||||| |||||||||||||| | |||||||||||| || ||||||| ||||||    
T  4162495 caagacactcaatgattttcactcgctcaaggtgtttacaatgttttccaacccaagagaa-ccctaatcaaagaccctcaaccctaaagttac 4162403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 179
Target Start/End: Original strand, 4743376 - 4743461
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaacccta 179  Q
    |||||||||||||||||||| |||  | ||||||||| | |||||||||||||||||||| || |||||||||||| || |||||||    
T  4743376 caagacactcaatgattttcgctcacccaaggtgtttacaatgtttcccaacccaagagattc-ctaatcaaagaccctcaacccta 4743461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 205
Target Start/End: Original strand, 1345544 - 1345655
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||||| |||||||||||| |||  | ||||||||| | || ||||||||| |||||||| ||||||||||| || || ||||||| ||||||  ||||    
T  1345544 caagacattcaatgattttcactcacccaaggtgtttacaatatttcccaactcaagagaa-ctctaatcaaaaaccctcaaccctaaagttacatcctt 1345642  T
Q  193 tgatttcccaagt 205  Q
    |||||| ||||||    
T  1345643 tgattttccaagt 1345655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 1292636 - 1292749
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||||||||||| |||||| |||  | ||||||||  |  ||||||||||||||| |||| |||||||||||||| || ||||||| ||||||  | ||    
T  1292636 caagacactcaataattttcactcacccaaggtgttcacagtgtttcccaacccaaaagaa-ctctaatcaaagaccctcaaccctaaagttacctcatt 1292734  T
Q  193 tgatttcccaagttt 207  Q
    |||||| ||||||||    
T  1292735 tgattttccaagttt 1292749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 41366787 - 41366879
Alignment:
Q  94 caagacactcaatgattttctctc-ttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttac 186  Q
    |||||||||||||||||||| |||   |||||||||| | ||||||||||| | ||||||| |||||||||||||  || ||||||| ||||||    
T  41366787 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaatctaagagaa-ctctaatcaaagatcctcaaccctaaagttac 41366879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 18141816 - 18141693
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttccca-tgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccct 191  Q
    |||||||||||||||||||| |||  | ||||||||| | | |||||||||||| ||||||| | |||||||||||| || ||||||| | ||||  |||    
T  18141816 caagacactcaatgattttcactcgcccaaggtgtttacaaatgtttcccaacctaagagaacc-ctaatcaaagaccctcaaccctaaaattacctcct 18141718  T
Q  192 ttgatttcccaagtttctctttctt 216  Q
    | ||||| || ||||||||| ||||    
T  18141717 tcgattttcctagtttctctctctt 18141693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 8153753 - 8153634
Alignment:
Q  98 acactcaatgattttctctcttc-aaggtgtttccca-tgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttga 195  Q
    |||||||||||||||| ||| || ||||||| | | | ||||||||||||||| ||||  | |||||||||||||| |||| || | ||||  |||||||    
T  8153753 acactcaatgattttcactcatccaaggtgtatacaaatgtttcccaacccaaaagaacat-taatcaaagactctcaaccttaaaattacctcctttga 8153655  T
Q  196 tttcccaagtttctctttctt 216  Q
    ||||| || ||||||| ||||    
T  8153654 tttcctaaatttctctctctt 8153634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 40321075 - 40321015
Alignment:
Q  94 caagacactcaatgattttctctct-tcaaggtgtttcccatgtttcccaacccaagagaa 153  Q
    ||||||||||||||||||||  ||  ||||||||||| | |||||||||||| ||||||||    
T  40321075 caagacactcaatgattttcagtcactcaaggtgtttacaatgtttcccaactcaagagaa 40321015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 31495392 - 31495611
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaagac 99  Q
    |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| | | ||||||| ||||| | ||||  |||| ||||||||    
T  31495392 ttacaaaagagatacaaaaagagttacaagaaattagatt-tgacaagttcacaatgaacaatcctaatttctacccttttccca--atctcaccaagac 31495488  T
Q  100 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttc 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  31495489 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactataaaccctagagttactccctttgatttc 31495588  T
Q  200 ccaagtttctctttcttccaact 222  Q
    |||||||||||| ||||||||||    
T  31495589 ccaagtttctctctcttccaact 31495611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 7 - 217
Target Start/End: Original strand, 13992373 - 13992582
Alignment:
Q  7 aagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaagacactcaa 105  Q
    ||||||||||||| |||||||||||||||||||  ||| |||||||||| |||| ||| ||||||| ||||| |   | |||||| ||||||||||||||    
T  13992373 aagagatacaaaa-gagttacaagaaattagatt-tgacaagttcacaaagaacaaccctaatttctacccttttttcccaatctcaccaagacactcaa 13992470  T
Q  106 tgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagt 205  Q
    |||||||| |||  |||||||||| | ||||||||||||||||||||  |||||||||||||| |||||||||| |||| || |||||||||||||||||    
T  13992471 tgattttcactcaccaaggtgtttacaatgtttcccaacccaagagagactctaatcaaagaccctaaaccctaaagttgctacctttgatttcccaagt 13992570  T
Q  206 ttctctttcttc 217  Q
    |||||| |||||    
T  13992571 ttctctctcttc 13992582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 5429674 - 5429551
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||| ||||    
T  5429674 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacttcctt 5429576  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  5429575 tgatttcccaagtttctctctcttc 5429551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 56178810 - 56178932
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| ||||||||||||||  | ||||||| ||||||  |||||    
T  56178810 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccttcaaccctaaagttacctccttt 56178908  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  56178909 gatttcccaagtttctctctcttc 56178932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 48143037 - 48142914
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  48143037 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 48142939  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  48142938 tgatttcccaagtttctctctcttc 48142914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 37740620 - 37740498
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    ||||||||||| |||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| | ||||  |||||    
T  37740620 caagacactcagtgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaacttacctccttt 37740522  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  37740521 gatttcccaagtttctctctcttc 37740498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 95 - 217
Target Start/End: Original strand, 9927632 - 9927753
Alignment:
Q  95 aagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttg 194  Q
    |||||||||| |||||||| |||  |||||||||| | ||||||||||||||||||||| || ||||||||||| || ||||||| ||||||  ||||||    
T  9927632 aagacactcagtgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctttaatcaaagaccctcaaccctaaagttacctcctttg 9927730  T
Q  195 atttcccaagtttctctttcttc 217  Q
    ||||||||||||||||| |||||    
T  9927731 atttcccaagtttctctctcttc 9927753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 5136074 - 5135950
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||| ||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  5136074 caatctcaccaagacactcaatgatt--ctctctacaaggtatttcccatgtttttcaacccaagagatactctaatcaaagaaccctaaaccctagagc 5135977  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | ||||||||||||||||||||||||    
T  5135976 ttc-ccctttgatttcccaagtttctct 5135950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 52082830 - 52082953
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||||| |||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  52082830 caagacagtcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 52082928  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  52082929 tgatttcccaagtttctctctcttc 52082953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 52095535 - 52095658
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||| | || ||||||| ||||||  ||||    
T  52095535 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagtccctcaaccctaaagttacctcctt 52095633  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  52095634 tgatttcccaagtttctctctcttc 52095658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 7122693 - 7122568
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| ||||||||||||||||||| ||||| | |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  7122693 caatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 7122595  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  7122594 ttc-ccctttgatttcccaagtctctct 7122568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 7124912 - 7124787
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| ||||||||||||||||||| ||||| | |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  7124912 caatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 7124814  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  7124813 ttc-ccctttgatttcccaagtctctct 7124787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 29999979 - 30000101
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||| ||||||| |||  |||||||||| | |||||||| |||||||||||| |||||||||||||| |||||||||| ||||    |||||    
T  29999979 caagacactcaacgattttcactcaccaaggtgtttacaatgtttccaaacccaagagaa-ctctaatcaaagaccctaaaccctaaagttgtctccttt 30000077  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  30000078 gatttcccaagtttctctctcttc 30000101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 5138299 - 5138176
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaaga-ctctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||| |||||||||||| | |||||||||||  ||||||||||||| | |||||||||||||     
T  5138299 caatctcaccaagacactcaatgatt--ctctctacaaggtatttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagc 5138203  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | ||||||||||||||||||||||||    
T  5138202 ttc-ccctttgatttcccaagtttctct 5138176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 8395614 - 8395491
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  8395614 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 8395518  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  8395517 ttc-ccctttgatttcccaagtctctct 8395491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 12739723 - 12739846
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||| | |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  12739723 caagacactcaatgatttccactcacctaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 12739821  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||| ||||||||||| |||||    
T  12739822 tgatttctcaagtttctctctcttc 12739846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 12747929 - 12748052
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||| | |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  12747929 caagacactcaatgatttccactcacctaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 12748027  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||| ||||||||||| |||||    
T  12748028 tgatttctcaagtttctctctcttc 12748052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 54200079 - 54200201
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | || |||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  54200079 caagacactcaatgattttcactcacccaatgtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 54200177  T
Q  193 tgatttcccaagtttctctttctt 216  Q
    |||||||| |||||||||| ||||    
T  54200178 tgatttcctaagtttctctctctt 54200201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 5871815 - 5871702
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| |  ||||||| ||||||  ||||    
T  5871815 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagacccataaccctaaagttacctcctt 5871717  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  5871716 tgatttcccaagttt 5871702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 13009604 - 13009717
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  | ||    
T  13009604 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagacccttaaccctaaagttacctcatt 13009702  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  13009703 tgatttcccaagttt 13009717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 34570587 - 34570704
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||| ||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| || |||  ||||    
T  34570587 caagacactcaatgattttcactcacccaagatgttttcaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagctacctcctt 34570685  T
Q  193 tgatttcccaagtttctct 211  Q
    |||||||||||||||||||    
T  34570686 tgatttcccaagtttctct 34570704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 26175809 - 26175932
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | |||||||||||||||| |||| || ||||||||||| || ||| ||| ||||||  ||||    
T  26175809 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaacagaa-ctttaatcaaagaccctcaactctaaagttacctcctt 26175907  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  26175908 tgatttcccaagtttctctctcttc 26175932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 5370260 - 5370382
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  ||| |||||| | |||||||||| |||||||||| || ||||||||||| |||||||||| ||||    |||||    
T  5370260 caagacactcaatgattttcactcaccaaagtgtttacaatgtttcccagcccaagagaa-ctataatcaaagaccctaaaccctaaagttgtctccttt 5370358  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||| ||||||||||| |||||    
T  5370359 gatttctcaagtttctctctcttc 5370382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 8393405 - 8393282
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||||  ||||||||||||  |||||||||||| ||  ||||||||||||     
T  8393405 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccataaaccctagagc 8393309  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | ||||||||||||||| || |||||    
T  8393308 ttc-ccctttgatttcccaggtctctct 8393282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 217
Target Start/End: Original strand, 52093882 - 52093960
Alignment:
Q  138 tcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttcttc 217  Q
    |||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||||||||||||||||||||| |||||    
T  52093882 tcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 52093960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 47038582 - 47038695
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | |||||||||   ||||||||||||||||||||| |||||||||||||| || ||||||| |||||   ||||    
T  47038582 caagacactcaatgattttcactcacccaaggtgtttataatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttaactcctt 47038680  T
Q  193 tgatttcccaagttt 207  Q
    ||||||||| |||||    
T  47038681 tgatttccccagttt 47038695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 12745609 - 12745732
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| |  |||||||||| ||||||||| |||||||||||||| || ||| ||| ||||||  ||||    
T  12745609 caagacactcaatgattttcactcacccaaggtgtttacattgtttcccaaaccaagagaa-ctctaatcaaagaccctcaactctaaagttacctcctt 12745707  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    |  |||||||||||||||| |||||    
T  12745708 ttttttcccaagtttctctctcttc 12745732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 29254489 - 29254372
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||||||||||||||||||  ||  | || |||||| | ||||||||||||||||||||| ||||| ||||||||  | ||||||| |||||   ||||    
T  29254489 caagacactcaatgattttcattcacccaatgtgtttacaatgtttcccaacccaagagaa-ctctactcaaagaccttcaaccctaaagttatctcctt 29254391  T
Q  193 tgatttcccaagtttctct 211  Q
    |||||||||||||||||||    
T  29254390 tgatttcccaagtttctct 29254372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 24969107 - 24968984
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttccca-tgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccct 191  Q
    |||||| ||||||||||||| |||  | ||||||||| | | |||||||||||||||||||| ||||||||||||||  | |||| || ||||||  |||    
T  24969107 caagactctcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaagagaa-ctctaatcaaagaccgtcaaccttaaagttacctcct 24969009  T
Q  192 ttgatttcccaagtttctctttctt 216  Q
    |||||||||||||||| ||| ||||    
T  24969008 ttgatttcccaagtttttctctctt 24968984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 52467527 - 52467650
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttccca-tgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccct 191  Q
    |||||||||||||||||||| |||  | ||||||||| | | |||||||||||||||||||| | |||||||||||| || ||||||| | ||||  |||    
T  52467527 caagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaagagaacc-ctaatcaaagaccctcaaccctaaaattacctcct 52467625  T
Q  192 ttgatttcccaagtttctctttctt 216  Q
    |||||| ||| ||||||||| ||||    
T  52467626 ttgattaccctagtttctctctctt 52467650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 36994519 - 36994397
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | |||||| ||||  |||||||| |||||||||||||| || ||||  | ||||||  ||||    
T  36994519 caagacactcaatgattttcactcacccaaggtgtttacaatgtttgccaaatcaagagaa-ctctaatcaaagaccctcaaccaaa-agttacctcctt 36994422  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    |||||| |||||||||||| |||||    
T  36994421 tgattttccaagtttctctctcttc 36994397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 207
Target Start/End: Complemental strand, 3910075 - 3909989
Alignment:
Q  120 caaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagttt 207  Q
    |||||||||| | ||||||| ||||| ||||||| |||||||||||| | |||||||||  ||||||  ||||||||||||| |||||    
T  3910075 caaggtgtttacaatgtttctcaacctaagagaa-ctctaatcaaaggccctaaacccttaagttacctcctttgatttccctagttt 3909989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 35369614 - 35369665
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttccca--tgtttcccaa 143  Q
    |||||||||||||||||||| |||| ||||||||||||||  ||||||||||    
T  35369614 caagacactcaatgattttcactctacaaggtgtttcccaattgtttcccaa 35369665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 6677423 - 6677340
Alignment:
Q  133 atgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttctt 216  Q
    ||||||||||||||||||||| | || | ||||||| || ||||||| ||||||  ||||||||  || || ||||||||||||    
T  6677423 atgtttcccaacccaagagaacccctgaacaaagacactcaaccctaaagttacctcctttgataccctaaatttctctttctt 6677340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 37229972 - 37230031
Alignment:
Q  157 ctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttctt 216  Q
    |||||||||||| |||||||||| ||||||  ||||||||||| ||||||| ||| ||||    
T  37229972 ctaatcaaagaccctaaaccctaaagttacctcctttgatttctcaagtttgtctctctt 37230031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 216
Target Start/End: Original strand, 37755149 - 37755220
Alignment:
Q  145 ccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttctt 216  Q
    ||||||||| |||| | |||||||||| || |||| ||||||  |||||||||| |||||||||||| ||||    
T  37755149 ccaagagaacctctcaccaaagactctcaatcctaaagttacctcctttgattttccaagtttctctctctt 37755220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 45687432 - 45687491
Alignment:
Q  157 ctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttctt 216  Q
    |||||||||||| || ||||||| ||||||  ||||||||||||| ||||||||| ||||    
T  45687432 ctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctctt 45687491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 46147591 - 46147650
Alignment:
Q  157 ctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttctt 216  Q
    |||||||||||| || ||||||| ||||||  ||||||||||||||||||| ||| ||||    
T  46147591 ctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctctt 46147650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 211
Target Start/End: Complemental strand, 51337056 - 51336941
Alignment:
Q  97 gacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttga 195  Q
    ||||||||||||||||| |||  | ||||||||| | |||||| |||||||||||||| |||    |||||||  | ||||||| ||||||| ||||||     
T  51337056 gacactcaatgattttcactcacccaaggtgtttacaatgttttccaacccaagagaacctcactacaaagacattcaaccctaaagttacttcctttgt 51336957  T
Q  196 tttcccaagtttctct 211  Q
     |||| ||||||||||    
T  51336956 attcctaagtttctct 51336941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 6542354 - 6542472
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||||||||||| |||||| |||  | ||||||||| | ||||||||||||||||||||| |||    ||||||| || ||||||| ||||||  ||||    
T  6542354 caagacactcaataattttcactcacccaaggtgtttacaatgtttcccaacccaagagaacctcattacaaagacactcaaccctaaagttacctcctt 6542453  T
Q  193 tgatttcccaagtttctct 211  Q
    ||  |||| | ||||||||    
T  6542454 tgtattcctaggtttctct 6542472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 33089873 - 33089833
Alignment:
Q  94 caagacactcaatgattttctctctt-caaggtgtttccca 133  Q
    |||||||||||||||||||| ||||| ||||||||||||||    
T  33089873 caagacactcaatgattttcactcttccaaggtgtttccca 33089833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 147; Significance: 1e-77; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 43504230 - 43504448
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaagac 99  Q
    |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| ||| ||||||| ||||| | ||||  |||| ||||||||    
T  43504230 ttacaaaagagatacaaaaagagttacaagaaattagatt-tgacaagttcacaatgaacaaccctaatttctacccttttccca--atctcaccaagac 43504326  T
Q  100 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttc 199  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  43504327 actcgatgattttctctcttcaaggtgtttcccatgtttcccaagccaagagaagctctaatcaaagactctaaaccctagagtttctccctttgatttc 43504426  T
Q  200 ccaagtttctctttcttccaac 221  Q
    |||||||||||| |||||||||    
T  43504427 ccaagtttctctctcttccaac 43504448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 39731461 - 39731243
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaagac 99  Q
    ||||||||||||||||||| |||||||||||||||||||  ||| |||||||||| |||| ||| ||||||| ||||| |  |  |||||| ||||||||    
T  39731461 ttacaaaagagatacaaaa-gagttacaagaaattagat-ctgacaagttcacaaagaacaaccctaatttctaccctttttc--caatctcaccaagac 39731366  T
Q  100 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttc 199  Q
    |||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  39731365 actcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaagctctaatcaaagaccctaaaccctagagttactccctttgatttc 39731266  T
Q  200 ccaagtttctctttcttccaact 222  Q
    |||||||||||| ||||||||||    
T  39731265 ccaagtttctctctcttccaact 39731243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 94 - 218
Target Start/End: Complemental strand, 48408797 - 48408673
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  48408797 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccctagagttgctcccttt 48408698  T
Q  194 gatttcccaagtttctctttcttcc 218  Q
    |||||||||||||||||| ||||||    
T  48408697 gatttcccaagtttctctctcttcc 48408673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 24789852 - 24789726
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || ||||||||||||||    
T  24789852 caatcttaccaagacactcaatgattttctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagt 24789754  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | |||||||||||||||||||| |||||    
T  24789753 tgctccctttgatttcccaagtctctct 24789726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 20343988 - 20343773
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacga-ccataatttcgaccctctgcccacaatctaaccaaga 98  Q
    ||||||||| ||||||||| |  |||||||||||||| |  ||| ||||||||||||||| | || ||||||| ||||| | ||||  |||| |||||||    
T  20343988 ttacaaaagggatacaaaagg--ttacaagaaattagct--tgacaagttcacaatgaacaaaccctaatttctacccttttccca--atctcaccaaga 20343895  T
Q  99 cactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagttactccctttgatt 197  Q
    |||||||||||| ||||| | |||||||||||||||||||  ||||||||||||  |||||||||||| || ||||||||||||||| ||||||||||||    
T  20343894 cactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatt 20343796  T
Q  198 tcccaagtttctctttcttccaa 220  Q
     ||||||| ||||| ||||||||    
T  20343795 ccccaagtctctctctcttccaa 20343773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 24514934 - 24515056
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| |||||||||| |||| || |||||    
T  24514934 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctaaaccctaaagttgcttccttt 24515032  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  24515033 gatttcccaagtttctctctcttc 24515056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 4178769 - 4178647
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| |||||||||| |||| || |||||    
T  4178769 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctaaaccctaaagttgcttccttt 4178671  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||| ||||||||||| |||||    
T  4178670 gatttctcaagtttctctctcttc 4178647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 94 - 222
Target Start/End: Complemental strand, 29991049 - 29990922
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| |||||||||| ||||    |||||    
T  29991049 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctaaaccctaaagttgtctccttt 29990951  T
Q  194 gatttcccaagtttctctttcttccaact 222  Q
    |||||||||||||||||| ||||| ||||    
T  29990950 gatttcccaagtttctctctcttcaaact 29990922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 35853909 - 35853787
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| ||| |||||||||| |||||||||| |||| || |||||    
T  35853909 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctcaaatcaaagaccctaaaccctaaagttgctaccttt 35853811  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    ||||||| |||||||||| |||||    
T  35853810 gatttcctaagtttctctctcttc 35853787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 25767131 - 25767250
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | |||||||||||    |||||| |||||||||||||| ||||||||||||||| ||||||||    
T  25767131 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaa----agagaaactctaatcaaagaccctaaaccctagagttgctcccttt 25767226  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||| ||||||||||| |||||    
T  25767227 gatttctcaagtttctctctcttc 25767250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 1113652 - 1113529
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||| ||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||| ||||    
T  1113652 caagacactcaatgattttcactcacccaagttgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacttcctt 1113554  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  1113553 tgatttcccaagtttctctctcttc 1113529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 43864239 - 43864116
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| || ||||||||||| || ||||||| ||||||  ||||    
T  43864239 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctttaatcaaagaccctcaaccctaaagttacctcctt 43864141  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  43864140 tgatttcccaagtttctctctcttc 43864116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 222
Target Start/End: Original strand, 1562162 - 1562296
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||  |||||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  1562162 caatctcaccaagacactcaatga--ttctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 1562258  T
Q  184 tactccctttgatttcccaagtttctctttcttccaact 222  Q
    | | |||||||||| ||||||| ||||| ||||||||||    
T  1562259 ttc-ccctttgattccccaagtctctctctcttccaact 1562296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 23555034 - 23554912
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | |||||||||||| |||||||| ||||||||||||||  | ||||||  ||||||  |||||    
T  23555034 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaactcaagagaa-ctctaatcaaagaccttcaaccctgaagttacctccttt 23554936  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  23554935 gatttcccaagtttctctctcttc 23554912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 38671395 - 38671508
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  38671395 caagacactcaatgattttcgctcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 38671493  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  38671494 tgatttcccaagttt 38671508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 32060482 - 32060607
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagag- 182  Q
    |||||| ||||||||||||||||||| ||||| | |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  32060482 caatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 32060580  T
Q  183 ttactccctttgatttcccaagtttctct 211  Q
    |||  |||||||||||||||||| |||||    
T  32060581 tta--ccctttgatttcccaagtctctct 32060607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 6592498 - 6592621
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||  |||||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  6592498 caatctcaccaagacactcaatga--ttctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 6592594  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  6592595 ttc-ccctttgatttcccaagtctctct 6592621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 6594716 - 6594839
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||  |||||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  6594716 caatctcaccaagacactcaatga--ttctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 6594812  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  6594813 ttc-ccctttgatttcccaagtctctct 6594839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 14070006 - 14070129
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||| ||||||||||||||| |||||||||||||| || | ||||| ||||||  ||||    
T  14070006 caagacactcaatgattttcactcacccaaggtgtttacaatgttacccaacccaagagaa-ctctaatcaaagaccctcagccctaaagttacctcctt 14070104  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  14070105 tgatttcccaagtttctctctcttc 14070129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 14380034 - 14380157
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||| ||||||||||||||| |||||||||||||| || | ||||| ||||||  ||||    
T  14380034 caagacactcaatgattttcactcacccaaggtgtttacaatgttacccaacccaagagaa-ctctaatcaaagaccctcagccctaaagttacctcctt 14380132  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  14380133 tgatttcccaagtttctctctcttc 14380157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 18388918 - 18389041
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||  |||||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  18388918 caatctcaccaagacactcaatga--ttctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 18389014  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  18389015 ttc-ccctttgatttcccaagtctctct 18389041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 18392354 - 18392477
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||  |||||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  18392354 caatctcaccaagacactcaatga--ttctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 18392450  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  18392451 ttc-ccctttgatttcccaagtctctct 18392477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 47676309 - 47676432
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||||||||| |||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| |||||   ||||    
T  47676309 caagacactcattgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttatctcctt 47676407  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  47676408 tgatttcccaagtttctctctcttc 47676432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 19502172 - 19502051
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    ||||||||||||||||| || |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  | |||    
T  19502172 caagacactcaatgattctcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcattt 19502074  T
Q  194 gatttcccaagtttctctttctt 216  Q
    |||||| ||||||| ||| ||||    
T  19502073 gatttctcaagtttgtctctctt 19502051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 219
Target Start/End: Original strand, 31733142 - 31733267
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||| ||| ||||||  | ||    
T  31733142 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaactctaaagttacctcttt 31733240  T
Q  193 tgatttcccaagtttctctttcttcca 219  Q
    ||||||| ||||||||||| |||||||    
T  31733241 tgatttctcaagtttctctctcttcca 31733267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 222
Target Start/End: Complemental strand, 4586156 - 4586028
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||| | |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||  || ||||||| ||||||  ||||    
T  4586156 caagacactcaatgatttacactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagagcctcaaccctaaagttacatcctt 4586058  T
Q  193 tgatttcccaagtttctctttcttccaact 222  Q
    ||||||||||||||| ||| ||||| ||||    
T  4586057 tgatttcccaagtttttctctcttctaact 4586028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 48489399 - 48489303
Alignment:
Q  120 caaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttcttc 217  Q
    |||||||||| | ||||||||||||||||||||| ||||||||||||||  | ||||||| ||||||  ||||||||||||||||||||||| |||||    
T  48489399 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccatcaaccctaaagttacctcctttgatttcccaagtttctctatcttc 48489303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 94 - 209
Target Start/End: Original strand, 4538713 - 4538828
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | || ||||||||||||||||||| |||||||||||||||| |||| || | ||||  ||||    
T  4538713 caagacactcaatgattttcactcacccaaggtgtttacaatttttcccaacccaagagaat-tctaatcaaagactctcaaccttaaaattacctcctt 4538811  T
Q  193 tgatttcccaagtttct 209  Q
    |||||||||||||||||    
T  4538812 tgatttcccaagtttct 4538828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 48491574 - 48491451
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | || |||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  48491574 caagacactcaatgattttcactcacccaaagtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 48491476  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||  ||||||||||| |||||    
T  48491475 tgatttatcaagtttctctctcttc 48491451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 211
Target Start/End: Complemental strand, 18126635 - 18126522
Alignment:
Q  98 acactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgat 196  Q
    |||||||||||||||| |||  | ||| ||||| | ||||||||||||||| ||||| |||||||||||||| || ||||||| ||||||  ||||||||    
T  18126635 acactcaatgattttcactcacccaagttgtttacaatgtttcccaacccatgagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgat 18126537  T
Q  197 ttcccaagtttctct 211  Q
    |||||||||||||||    
T  18126536 ttcccaagtttctct 18126522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 26417311 - 26417198
Alignment:
Q  94 caagacactcaatgattttctctct-tcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| | |  ||||||||||| | ||||||||||| ||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  26417311 caagacactcaatgattttcacccgctcaaggtgtttacaatgtttcccaatccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 26417213  T
Q  193 tgatttcccaagttt 207  Q
    ||||||| |||||||    
T  26417212 tgatttctcaagttt 26417198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 30024905 - 30025028
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | | ||||  ||||| ||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  30024905 caagacactcaatgattttcactcacccaaggtgtttacaacgtttttcaacctaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 30025003  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  30025004 tgatttcccaagtttctctctcttc 30025028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 47674116 - 47674239
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | |||||| |||||||||||||| ||||||||||||||  | |||| |  ||||||  ||||    
T  47674116 caagacactcaatgattttcactcacccaaggtgtttacaatgttttccaacccaagagaa-ctctaatcaaagaccttcaaccttgaagttacctcctt 47674214  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  47674215 tgatttcccaagtttctctctcttc 47674239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 25615858 - 25615745
Alignment:
Q  94 caagacactcaatgattttctctc-ttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||||||||||||||||||||||   |||||||||| | |||||| |||||||||||||| |||||||||||||| || |||| || |||||   ||||    
T  25615858 caagacactcaatgattttctctcacccaaggtgtttacaatgttttccaacccaagagaa-ctctaatcaaagacccttaaccttaaagttaactcctt 25615760  T
Q  193 tgatttcccaagttt 207  Q
    |||||||| ||||||    
T  25615759 tgatttcctaagttt 25615745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 41649183 - 41649295
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| ||   | ||||||||| | ||||||||||||||||||||| ||||||| |||||| || ||||||| |||||   ||||    
T  41649183 caagacactcaatgattttcacttacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaataaaagac-cttaaccctaaagttaactcctt 41649280  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  41649281 tgatttcccaagttt 41649295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 2761475 - 2761598
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||| ||||||||| |||  | || |||||| | ||||||||||||||||||||| ||||||||||| |   | ||||||| ||||||  ||||    
T  2761475 caagacactcgatgattttcactcacccaatgtgtttacaatgtttcccaacccaagagaa-ctctaatcaaatatcatcaaccctaaagttacctcctt 2761573  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||| ||| |||||    
T  2761574 tgatttcccaagtttatctctcttc 2761598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 23343929 - 23343847
Alignment:
Q  133 atgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttctt 216  Q
    |||||||| |||| ||||||| | |||||||||||||||  |||||| ||||||  |||||||||||||||| |||||||||||    
T  23343929 atgtttccaaacctaagagaacc-ctaatcaaagactctcgaccctaaagttacatcctttgatttcccaagattctctttctt 23343847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 24526070 - 24526192
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||| ||||||| |  ||||||||||| || ||||||| |||||   ||||    
T  24526070 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacctaagagaacca-taatcaaagaccctcaaccctaaagttatctcctt 24526168  T
Q  193 tgatttcccaagtttctctttctt 216  Q
    ||||||||| ||||| ||| ||||    
T  24526169 tgatttccctagtttttctctctt 24526192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 31105566 - 31105679
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||| || ||||||| || || ||||||||||| || ||||||| ||||||  ||||    
T  31105566 caagacactcaatgattttcactcacccaaggtgtttacaatgtttctcaccccaagataa-ctataatcaaagaccctcaaccctaaagttacctcctt 31105664  T
Q  193 tgatttcccaagttt 207  Q
    ||||||| |||||||    
T  31105665 tgatttctcaagttt 31105679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 207
Target Start/End: Original strand, 496183 - 496269
Alignment:
Q  120 caaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagttt 207  Q
    |||||| ||| | ||||||||||| ||||||||| |||||||||||||| || |||| || ||||||  | |||||||||||||||||    
T  496183 caaggtttttacaatgtttcccaatccaagagaa-ctctaatcaaagaccctcaaccttaaagttacctcatttgatttcccaagttt 496269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 4253702 - 4253825
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttccca-tgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccct 191  Q
    ||||| |||||||||||||| |||  | ||||||||| | | ||||| |||||||||||||| | || | |||| || || ||||||| ||||||  |||    
T  4253702 caagaaactcaatgattttcactcacctaaggtgtttacaaatgttttccaacccaagagaacc-ctcaccaaataccctcaaccctaaagttacctcct 4253800  T
Q  192 ttgatttcccaagtttctctttctt 216  Q
    |||||||||||||||||||| ||||    
T  4253801 ttgatttcccaagtttctctctctt 4253825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 41317607 - 41317667
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaa 153  Q
    ||||| |||||||||||||| ||| || ||||||||| | |||||||||||||||||||||    
T  41317607 caagagactcaatgattttcactcatccaaggtgtttacaatgtttcccaacccaagagaa 41317667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 12098108 - 12098167
Alignment:
Q  157 ctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttctt 216  Q
    |||||||||||| || ||||||| ||||||  ||||||||||||||||||| ||| ||||    
T  12098108 ctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctctt 12098167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 41317683 - 41317742
Alignment:
Q  157 ctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttctt 216  Q
    |||||||||||| || ||||||| ||||||  ||||||||||||| ||||||||| ||||    
T  41317683 ctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctctt 41317742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 6570561 - 6570476
Alignment:
Q  121 aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagttt 207  Q
    ||||||||| | |||||||||| |||||||||| | ||| |||||||| || || |||| ||||||  ||||||||||| |||||||    
T  6570561 aaggtgtttacaatgtttcccaccccaagagaacc-ctagtcaaagacactcaatcctaaagttacctcctttgatttctcaagttt 6570476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 31518790 - 31518677
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||| ||||||||| |||  | ||||||||| | |||||| ||||||||| |||| |  ||||||||||| || ||||||| |||||   ||||    
T  31518790 caagacactcgatgattttcactcacccaaggtgtttacgatgttttccaacccaaaagaacca-taatcaaagacccttaaccctaaagttatctcctt 31518692  T
Q  193 tgatttcccaagttt 207  Q
    |||||||| ||||||    
T  31518691 tgatttccaaagttt 31518677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 157
Target Start/End: Complemental strand, 9235447 - 9235410
Alignment:
Q  120 caaggtgtttcccatgtttcccaacccaagagaatctc 157  Q
    |||||||||| | |||||||||||||||||||||||||    
T  9235447 caaggtgtttacaatgtttcccaacccaagagaatctc 9235410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 8153337 - 8153277
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaa 153  Q
    |||||||||||||||||||| |||  | || |||||| | |||||||||||||||||||||    
T  8153337 caagacactcaatgattttcactcacccaatgtgtttacaatgtttcccaacccaagagaa 8153277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 12098032 - 12098092
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaa 153  Q
    |||||||||||||||||||| |||  | ||| ||||| | |||||||||||||||||||||    
T  12098032 caagacactcaatgattttcactcacccaagatgtttacaatgtttcccaacccaagagaa 12098092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 145; Significance: 2e-76; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 3072835 - 3073043
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaagac 99  Q
    |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| ||| ||||||| ||| | | ||||  |||| ||||||||    
T  3072835 ttacaaaagagatacaaaaagagttacaagaaattagatt-tgacaagttcacaatgaacaaccctaatttctaccattttccca--atctcaccaagac 3072931  T
Q  100 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttc 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  3072932 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagtttctccctttgatttc 3073031  T
Q  200 ccaagtttctct 211  Q
    ||||||||||||    
T  3073032 ccaagtttctct 3073043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 412194 - 411976
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaagac 99  Q
    |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| ||| ||||||| ||| | | ||||  |||| ||||||||    
T  412194 ttacaaaagagatacaaaaagagttacaagaaattagatt-tgataagttcacaatgaacaaccctaatttctacctttttccca--atctcaccaagac 412098  T
Q  100 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttc 199  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  412097 actcaatgattttctctcttcaaggtgtttcccatgttttc-aacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttc 411999  T
Q  200 ccaagtttctctttcttccaact 222  Q
     ||||||||||| ||||||||||    
T  411998 tcaagtttctctctcttccaact 411976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 2171704 - 2171827
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  2171704 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccctagagttgctcccttt 2171803  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  2171804 gatttcccaagtttctctctcttc 2171827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 211
Target Start/End: Original strand, 6097531 - 6097724
Alignment:
Q  17 aaaagagttacaagaaattagatggtga-aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaagacactcaatgattttctc 115  Q
    |||||||||||||||||||||||  ||| |||||||||| |||| | | ||||||| ||| | |  |||  |||| ||||| |||||||||||||||| |    
T  6097531 aaaagagttacaagaaattagatt-tgacaagttcacaaagaacaatcctaatttctaccatttttcca--atctcaccaaaacactcaatgattttcac 6097627  T
Q  116 tcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagttactccctttgatttcccaagtttctct 211  Q
    ||  |||||||||| ||||||||||||||| ||||||  |||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||    
T  6097628 tcaccaaggtgtttaccatgtttcccaaccaaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtttctct 6097724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 27647952 - 27647737
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacga-ccataatttcgaccctctgcccacaatctaaccaaga 98  Q
    ||||||||| ||||||||| |  |||||||||||||| |  ||| ||||||||||||||| | || ||||||| ||||| | ||||  |||| |||||||    
T  27647952 ttacaaaagggatacaaaagg--ttacaagaaattagct--tgacaagttcacaatgaacaaaccctaatttctacccttttccca--atctcaccaaga 27647859  T
Q  99 cactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaaga-ctctaaaccctagagttactccctttgatt 197  Q
    ||||||||||||  |||||| || |||||||||||||||| | |||||||||||  ||||||||||||| | ||||||||||||||| ||||||||||||    
T  27647858 cactcaatgatt--ctctctacatggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatt 27647762  T
Q  198 tcccaagtttctctttcttccaact 222  Q
    |||||||| ||||| ||||||||||    
T  27647761 tcccaagtctctctctcttccaact 27647737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 5406372 - 5406494
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | |||||||||||||| |||||| |||||||||||||| |||||||||| |||| |  |||||    
T  5406372 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccgagagaa-ctctaatcaaagaccctaaaccctaaagttgcctccttt 5406470  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  5406471 gatttcccaagtttctctctcttc 5406494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 5410697 - 5410819
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | |||||||||||||| |||||| |||||||||||||| |||||||||| |||| |  |||||    
T  5410697 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccgagagaa-ctctaatcaaagaccctaaaccctaaagttgcctccttt 5410795  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  5410796 gatttcccaagtttctctctcttc 5410819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 16554960 - 16554744
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacga-ccataatttcgaccctctgcccacaatctaaccaaga 98  Q
    ||||||||| ||||||||| |  |||||||||||||| |  ||| ||||||||||||||| | || ||||||| ||||| | ||||  |||| |||||||    
T  16554960 ttacaaaagggatacaaaagg--ttacaagaaattagct--tgacaagttcacaatgaacaaaccctaatttctacccttttccca--atctcaccaaga 16554867  T
Q  99 cactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagttactccctttgatt 197  Q
    |||||||||||| ||||| | |||||||||||||||||||  ||||||||||||  |||||||||||| || ||||||||||||||| | ||||||||||    
T  16554866 cactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgatt 16554769  T
Q  198 tcccaagtttctctttcttccaact 222  Q
     ||||||| |||||  |||||||||    
T  16554768 ccccaagtctctctcacttccaact 16554744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 16631516 - 16631300
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacga-ccataatttcgaccctctgcccacaatctaaccaaga 98  Q
    ||||||||| ||||||||| |  |||||||||||||| |  ||| ||||||||||||||| | || ||||||| ||||| | ||||  |||| |||||||    
T  16631516 ttacaaaagggatacaaaagg--ttacaagaaattagct--tgacaagttcacaatgaacaaaccctaatttctacccttttccca--atctcaccaaga 16631423  T
Q  99 cactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagttactccctttgatt 197  Q
    |||||||||||| ||||| | |||||||||||||||||||  ||||||||||||  |||||||||||| || ||||||||||||||| | ||||||||||    
T  16631422 cactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgatt 16631325  T
Q  198 tcccaagtttctctttcttccaact 222  Q
     ||||||| |||||  |||||||||    
T  16631324 ccccaagtctctctcacttccaact 16631300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 5413566 - 5413688
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  ||| |||||| | |||||||||||||| |||||| |||||||||||||| |||||||||| |||| |  |||||    
T  5413566 caagacactcaatgattttcactcaccaatgtgtttacaatgtttcccaacccgagagaa-ctctaatcaaagaccctaaaccctaaagttgcctccttt 5413664  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  5413665 gatttcccaagtttctctatcttc 5413688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 16452503 - 16452625
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||| ||||||||||||| |||||||||||||| |||||| ||| |||| ||  ||||    
T  16452503 caagacactcaatgattttcactcaccaaggtgtttacaatgtttctcaacccaagagaa-ctctaatcaaagaccctaaactctaaagttgcttacttt 16452601  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  16452602 gatttcccaagtttctctctcttc 16452625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 9183204 - 9183327
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||| ||||| |||||||||||||| || ||||||| ||||||  ||||    
T  9183204 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaggagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 9183302  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  9183303 tgatttcccaagtttctctctcttc 9183327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 31404847 - 31404970
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatc-aaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  |||||||||| | |||||| |||||||||||||| |||||||| |||||| |||||||||| |||| |  ||||    
T  31404847 caagacactcaatgattttcactcaccaaggtgtttacaatgttttccaacccaagagaa-ctctaatcaaaagaccctaaaccctaaagttgcctcctt 31404945  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  31404946 tgatttcccaagtttctctctcttc 31404970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 16578595 - 16578811
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacga-ccataatttcgaccctctgcccacaatctaaccaaga 98  Q
    ||||||||| ||||||||| |  |||||||||||||| |  ||| ||||||||||||| | | || ||||||| ||||| | ||||  |||| |||||||    
T  16578595 ttacaaaagggatacaaaagg--ttacaagaaattagct--tgacaagttcacaatgagcaaaccctaatttctacccttttccca--atctcaccaaga 16578688  T
Q  99 cactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagttactccctttgatt 197  Q
    |||||||||||| ||||| | ||| |||||||||||||||  ||||||||||||  |||||||||||| || ||||||||||||||| | ||||||||||    
T  16578689 cactcaatgattctctctttacaacgtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgatt 16578786  T
Q  198 tcccaagtttctctttcttccaact 222  Q
     ||||||| |||||  |||||||||    
T  16578787 ccccaagtctctctcacttccaact 16578811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 16616785 - 16616569
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacga-ccataatttcgaccctctgcccacaatctaaccaaga 98  Q
    ||||||||| ||||||||| |  |||||||||||||| |  ||| ||||||||||||| | | || ||||||| ||||| | ||||  |||| |||||||    
T  16616785 ttacaaaagggatacaaaagg--ttacaagaaattagct--tgacaagttcacaatgagcaaaccctaatttctacccttttccca--atctcaccaaga 16616692  T
Q  99 cactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagttactccctttgatt 197  Q
    |||||||||||| ||||| | ||| |||||||||||||||  ||||||||||||  |||||||||||| || ||||||||||||||| | ||||||||||    
T  16616691 cactcaatgattctctctttacaacgtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgatt 16616594  T
Q  198 tcccaagtttctctttcttccaact 222  Q
     ||||||| |||||  |||||||||    
T  16616593 ccccaagtctctctcacttccaact 16616569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 16653203 - 16652987
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacga-ccataatttcgaccctctgcccacaatctaaccaaga 98  Q
    ||||||||| ||||||||| |  |||||||||||||| |  ||| ||||||||||||||| | || ||||||  ||||| | ||||  |||| |||||||    
T  16653203 ttacaaaagggatacaaaagg--ttacaagaaattagct--tgacaagttcacaatgaacaaaccctaatttttacccttttccca--atctcaccaaga 16653110  T
Q  99 cactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagttactccctttgatt 197  Q
    |||||||||||| ||||| | |||||||||||||||||||  ||||||||||||  |||||||||||| || ||||||||||||||| | ||||||||||    
T  16653109 cactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgatt 16653012  T
Q  198 tcccaagtttctctttcttccaact 222  Q
      |||||| |||||  |||||||||    
T  16653011 ctccaagtctctctcacttccaact 16652987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 25421316 - 25421191
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| ||||||||||||||||||| ||||| | |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  25421316 caatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 25421218  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  25421217 ttc-ccctttgatttcccaagtctctct 25421191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 30834710 - 30834832
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  | |||||||| | ||||||| ||||||||||||| ||||||||||||||  ||||||||| |||| || |||||    
T  30834710 caagacactcaatgattttcactcaccgaggtgtttacaatgtttctcaacccaagagaa-ctctaatcaaagaccataaaccctaaagttgcttccttt 30834808  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||| ||||||||||| |||||    
T  30834809 gatttctcaagtttctctctcttc 30834832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 95 - 219
Target Start/End: Original strand, 33160527 - 33160652
Alignment:
Q  95 aagacactcaatgatttt-ctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||| | |||  |||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||  |||||    
T  33160527 aagacactcaatgatttttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagactctcaaccctaaagttacctccttt 33160625  T
Q  194 gatttcccaag-tttctctttcttcca 219  Q
    |||| |||||| ||||||| |||||||    
T  33160626 gattccccaagttttctctctcttcca 33160652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 6027257 - 6027134
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  6027257 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 6027161  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  6027160 ttc-ccctttgatttcccaagtctctct 6027134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 33342264 - 33342387
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||  |||||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  33342264 caatctcaccaagacactcaatga--ttctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 33342360  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  33342361 ttc-ccctttgatttcccaagtctctct 33342387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 26954458 - 26954571
Alignment:
Q  94 caagacactcaatgattttctctcttcaa-ggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  ||| ||||||| | ||||||||||||| |||| || ||||||||||||||||| ||||||| ||||||  ||||    
T  26954458 caagacactcaatgattttcactccccaaaggtgtttacaatgtttcccaacctaagataa-ctctaatcaaagactctcaaccctaaagttacctcctt 26954556  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  26954557 tgatttcccaagttt 26954571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 16567201 - 16567088
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | |||||||| |||||||||||| |||||||||||||| || ||||||| |||||   ||||    
T  16567201 caagacactcaatgattttcactcacccaaggtgtttacaatgtttccaaacccaagagaa-ctctaatcaaagacccttaaccctaaagttaactcctt 16567103  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  16567102 tgatttcccaagttt 16567088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 28137581 - 28137694
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| |||||   ||||    
T  28137581 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttaactcctt 28137679  T
Q  193 tgatttcccaagttt 207  Q
    |||||| ||||||||    
T  28137680 tgattttccaagttt 28137694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 217
Target Start/End: Original strand, 33211385 - 33211481
Alignment:
Q  120 caaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttcttc 217  Q
    |||||||||| | ||||||||||||||||||||| |||||||||||||| || |||  || ||||||  ||||||||||||||||||||||| |||||    
T  33211385 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaactgtaaagttacctcctttgatttcccaagtttctctctcttc 33211481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 34164867 - 34164744
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||||  |||||||||||   |||||||||||| || |||||| ||||||     
T  34164867 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccaagaggtactctaatcaaagaaccctaaactctagagc 34164771  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  34164770 ttc-ccctttgatttcccaagtctctct 34164744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 34167089 - 34166966
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||||  |||||||||||   |||||||||||| || |||||| ||||||     
T  34167089 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccaagaggtactctaatcaaagaaccctaaactctagagc 34166993  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  34166992 ttc-ccctttgatttcccaagtctctct 34166966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 16569038 - 16568925
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| ||   | ||||||||| | |||||||| |||||||||||| |||||||||||||| || ||||||| | ||| | ||||    
T  16569038 caagacactcaatgattttcacttacccaaggtgtttacaatgtttccaaacccaagagaa-ctctaatcaaagacccttaaccctaaatttaattcctt 16568940  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  16568939 tgatttcccaagttt 16568925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 3039076 - 3039141
Alignment:
Q  94 caagacactcaatgattttctctct-tcaaggtgtttcccatgtttcccaacccaagagaatctct 158  Q
    ||||||| |||||||||||| |||  ||||||||||| | ||||||||||||||||||||| ||||    
T  3039076 caagacattcaatgattttcactcactcaaggtgtttacaatgtttcccaacccaagagaacctct 3039141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 2e-76; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 801184 - 800976
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaagac 99  Q
    |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| ||| ||||||| ||||| | ||||  |||| ||||||||    
T  801184 ttacaaaagagatacaaaaagagttacaagaaattagatt-tgacaagttcacaatgaacaaccctaatttctacccttttccca--atctcaccaagac 801088  T
Q  100 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttc 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||    
T  801087 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagtttcttcctttgatttc 800988  T
Q  200 ccaagtttctct 211  Q
    ||||||||||||    
T  800987 ccaagtttctct 800976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 94 - 222
Target Start/End: Original strand, 23200310 - 23200438
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  23200310 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccctagagttgctcccttt 23200409  T
Q  194 gatttcccaagtttctctttcttccaact 222  Q
    |||||||||||||||||| ||||||||||    
T  23200410 gatttcccaagtttctctctcttccaact 23200438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 94 - 222
Target Start/End: Original strand, 23198111 - 23198239
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  23198111 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccctagagttgctcccttt 23198210  T
Q  194 gatttcccaagtttctctttcttccaact 222  Q
    ||||| |||||||||||| ||||||||||    
T  23198211 gattttccaagtttctctctcttccaact 23198239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 6716591 - 6716375
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacga-ccataatttcgaccctctgcccacaatctaaccaaga 98  Q
    ||||||||| ||||||||| |  |||||||||||||| |  ||| ||||||||||||||| | || ||||||| ||||| | ||||  |||| |||||||    
T  6716591 ttacaaaagggatacaaaagg--ttacaagaaattagct--tgacaagttcacaatgaacaaaccctaatttctacccttttccca--atctcaccaaga 6716498  T
Q  99 cactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaaga-ctctaaaccctagagttactccctttgatt 197  Q
    |||||||||||| ||||| | ||||||||||||||||||| | |||||||||||  ||||||||||||| | ||||||||||||||||||||||||||||    
T  6716497 cactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttactccctttgatt 6716399  T
Q  198 tcccaagtttctctttcttccaac 221  Q
    |||||||| ||||| |||||||||    
T  6716398 tcccaagtctctctctcttccaac 6716375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 54635216 - 54634999
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacga-ccataatttcgaccctctgcccacaatctaaccaaga 98  Q
    ||||||||| ||||||||| |  |||||||||||||| |  ||| ||||||||||||||| | || ||||||| ||||| | ||||  |||| |||||||    
T  54635216 ttacaaaagggatacaaaagg--ttacaagaaattagct--tgacaagttcacaatgaacaaaccctaatttctacccttttccca--atctcaccaaga 54635123  T
Q  99 cactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaaga-ctctaaaccctagagttactccctttgatt 197  Q
    |||||||||||| ||||| | ||||||||||||||||||| | |||||||||||  ||||||||||||| | ||||||||||||||| ||||||||||||    
T  54635122 cactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatt 54635024  T
Q  198 tcccaagtttctctttcttccaact 222  Q
    |||||||| ||||| ||||||||||    
T  54635023 tcccaagtctctctctcttccaact 54634999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 85 - 221
Target Start/End: Complemental strand, 6718695 - 6718559
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaaga-ctctaaaccctagagt 183  Q
    |||||| ||||||||||||||||||| ||||| | ||||||||||||||||||| | |||||||||||  ||||||||||||| | ||||||||||||||    
T  6718695 caatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagt 6718597  T
Q  184 tactccctttgatttcccaagtttctctttcttccaac 221  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  6718596 tactccctttgatttcccaagtctctctctcttccaac 6718559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 92 - 222
Target Start/End: Original strand, 9636298 - 9636428
Alignment:
Q  92 accaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccct 191  Q
    |||||||||||||||||||||| |||  |||||||||| | || |||||||||||||||||  |||||||||||||| |||||||||| |||| || |||    
T  9636298 accaagacactcaatgattttcactcaccaaggtgtttacaatatttcccaacccaagagagactctaatcaaagaccctaaaccctaaagtttcttcct 9636397  T
Q  192 ttgatttcccaagtttctctttcttccaact 222  Q
    |||||||||||||||||||| ||||||||||    
T  9636398 ttgatttcccaagtttctctctcttccaact 9636428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 5258318 - 5258440
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| |||||||||| |||| ||||||||    
T  5258318 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctaaaccctaaagtttctcccttt 5258416  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||| ||||||||||| |||||    
T  5258417 gatttctcaagtttctctctcttc 5258440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 92 - 217
Target Start/End: Original strand, 5260495 - 5260619
Alignment:
Q  92 accaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccct 191  Q
    |||||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| |||||||||| |||| |  |||    
T  5260495 accaagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctaaaccctaaagttgcctcct 5260593  T
Q  192 ttgatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||||| |||||    
T  5260594 ttgatttcccaagtttctctctcttc 5260619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 45095159 - 45095037
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| |||||||||| |||| |  | |||    
T  45095159 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctaaaccctaaagttgcctctttt 45095061  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  45095060 gatttcccaagtttctctctcttc 45095037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 45282994 - 45282868
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| ||||||||||||||||||| ||||| | |||||||||||||||||||  ||||||||||||  |||||||||||| || ||||||||||||||    
T  45282994 caatctcaccaagacactcaatgattctctctttgcaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagt 45282896  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | |||||||||||| ||||||| |||||    
T  45282895 tgctccctttgattccccaagtctctct 45282868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 85 - 221
Target Start/End: Complemental strand, 25637437 - 25637304
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaaga-ctctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| ||||||||||||||||||| | |||||||||||  ||||||||||||| | |||||||||||||     
T  25637437 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagaga 25637341  T
Q  184 tactccctttgatttcccaagtttctctttcttccaac 221  Q
    ||| |||||||||||||||||| ||||| |||||||||    
T  25637340 tac-ccctttgatttcccaagtctctctctcttccaac 25637304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 7782370 - 7782443
Alignment:
Q  150 agaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttcttccaactg 223  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  7782370 agaagctctaatcaaagactctaaaacctagagttactccctttgatttcccaagtttctctctcttccaactg 7782443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 5236629 - 5236752
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  5236629 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 5236727  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
     |||||||||||||||||| |||||    
T  5236728 cgatttcccaagtttctctctcttc 5236752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 211
Target Start/End: Complemental strand, 7762259 - 7762144
Alignment:
Q  95 aagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttg 194  Q
    ||||||||||||||||||| |||  |||||||||  | || |||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||||    
T  7762259 aagacactcaatgattttcactcaccaaggtgttcacaatatttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttg 7762161  T
Q  195 atttcccaagtttctct 211  Q
    |||||||||||||||||    
T  7762160 atttcccaagtttctct 7762144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 40735378 - 40735255
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| || ||| ||||||||| | |||||||| |||||||||||| || ||||||||||| || ||||||| ||||||  ||||    
T  40735378 caagacactcaatgattttcacttttccaaggtgtttacaatgtttcctaacccaagagaa-ctttaatcaaagaccctcaaccctaaagttacctcctt 40735280  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  40735279 tgatttcccaagtttctctctcttc 40735255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 209
Target Start/End: Complemental strand, 51398809 - 51398694
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| ||| || ||||||||| | || ||||||||||||||| || ||||||||||||||||| ||||||| ||||||  ||||    
T  51398809 caagacactcaatgattttcactcatccaaggtgtttacaatatttcccaacccaagaaaa-ctctaatcaaagactctcaaccctaaagttacctcctt 51398711  T
Q  193 tgatttcccaagtttct 209  Q
    |||||||||||||||||    
T  51398710 tgatttcccaagtttct 51398694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 3617460 - 3617335
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| ||||||||||||||||||| ||||| | |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  3617460 caatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 3617362  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  3617361 ttc-ccctttgatttcccaagtctctct 3617335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 7764462 - 7764340
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | |||||||| ||||||||||||  ||||||||||||| || ||| ||| ||||||  |||||    
T  7764462 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcctaacccaagagaa-atctaatcaaagaccctcaactctaaagttacctccttt 7764364  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  7764363 gatttcccaagtttctctctcttc 7764340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 7780080 - 7780208
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaagac 99  Q
    ||||||||||||||||||| |  ||||||||||||||||  ||| ||||||||||||||| ||| ||||||| ||||| | ||||  |||| || |||||    
T  7780080 ttacaaaagagatacaaaagg--ttacaagaaattagatt-tgacaagttcacaatgaacaaccctaatttctacccttttccca--atctcacgaagac 7780174  T
Q  100 actcaatgattttctctcttcaaggtgtttccca 133  Q
    ||||||||||||||||||||||||||||||||||    
T  7780175 actcaatgattttctctcttcaaggtgtttccca 7780208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 37408453 - 37408331
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    ||||||||||||| |||||| |||   ||||||||| | ||||||||||||||||||||| ||||||||||||||  ||||||||| |||| |  |||||    
T  37408453 caagacactcaataattttcactcactaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccataaaccctaaagttgcctccttt 37408355  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  37408354 gatttcccaagtttctctctcttc 37408331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 4600903 - 4601026
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||  |||||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  4600903 caatctcaccaagacactcaatga--ttctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 4600999  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    |  ||||||||||||||||||| |||||    
T  4601000 t-ttccctttgatttcccaagtctctct 4601026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 32744606 - 32744721
Alignment:
Q  100 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttc 199  Q
    |||||||||||||| |||  ||| |||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  |||||||||||    
T  32744606 actcaatgattttcactcaccaatgtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttc 32744704  T
Q  200 ccaagtttctctttctt 216  Q
    |||||||| ||| ||||    
T  32744705 ccaagtttttctctctt 32744721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 760842 - 760729
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| ||| || |||||||||   ||||||||||||||||||||| |||||||||||||| || ||||||| |||||   ||||    
T  760842 caagacactcaatgattttcactcatccaaggtgtttataatgtttcccaacccaagagaa-ctctaatcaaagacccttaaccctaaagttaactcctt 760744  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  760743 tgatttcccaagttt 760729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 9581278 - 9581165
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| |||||   ||||    
T  9581278 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagacccttaaccctaaagttaactcctt 9581180  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  9581179 tgatttcccaagttt 9581165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 39153534 - 39153647
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||||||||||||||||||  ||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  39153534 caagacactcaatgattttcattcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 39153632  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  39153633 tgatttcccaagttt 39153647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 4598682 - 4598805
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||  |||||||| || ||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  4598682 caatctcaccaagacactcaatga--ttctctctacagggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 4598778  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    |  ||||||||||||||||||| |||||    
T  4598779 t-ttccctttgatttcccaagtctctct 4598805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 10209184 - 10209061
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||||  |||||||||||   |||||||||||| || |||||||||||||     
T  10209184 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccaagaggtactctaatcaaagaaccctaaaccctagagc 10209088  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    |  ||||||||||||||||||| |||||    
T  10209087 t-ttccctttgatttcccaagtctctct 10209061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 10211404 - 10211281
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||||  |||||||||||   |||||||||||| || |||||||||||||     
T  10211404 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccaagaggtactctaatcaaagaaccctaaaccctagagc 10211308  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    |  ||||||||||||||||||| |||||    
T  10211307 t-ttccctttgatttcccaagtctctct 10211281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 94 - 209
Target Start/End: Complemental strand, 40734493 - 40734378
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| |||||   ||||    
T  40734493 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttatctcctt 40734395  T
Q  193 tgatttcccaagtttct 209  Q
    |||||| ||||||||||    
T  40734394 tgattttccaagtttct 40734378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 217
Target Start/End: Complemental strand, 29810862 - 29810740
Alignment:
Q  95 aagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||| |||||||||||| |||  | ||||||||| | |||||||||||||||| |||| |||||||||||||| || ||||||| | ||||  |||||    
T  29810862 aagacattcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaaaagaa-ctctaatcaaagaccctcaaccctaaaattacctccttt 29810764  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||| |||||||||    
T  29810763 gatttcccaagtttttctttcttc 29810740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 19684062 - 19684175
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||||| |||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| |||||   ||||    
T  19684062 caagacattcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagacccttaaccctaaagttaactcctt 19684160  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  19684161 tgatttcccaagttt 19684175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 26386654 - 26386767
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | || || ||| || |||||||||||| ||||||| ||||||||||||||||| ||||||| ||||||  ||||    
T  26386654 caagacactcaatgattttcactcacccaaagtatttaccctgtttcccaacctaagagaa-ctctaatcaaagactctcaaccctaaagttacctcctt 26386752  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  26386753 tgatttcccaagttt 26386767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 29682354 - 29682241
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| | |||   ||||    
T  29682354 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagacccttaaccctaaatttaactcctt 29682256  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  29682255 tgatttcccaagttt 29682241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 10056228 - 10056105
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||||  |||||||||||   |||||||||||| || |||||| ||||||     
T  10056228 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccaagaggtactctaatcaaagaaccctaaactctagagc 10056132  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  10056131 ttc-ccctttgatttcccaagtctctct 10056105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 10058450 - 10058327
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||||  |||||||||||   |||||||||||| || |||||| ||||||     
T  10058450 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccaagaggtactctaatcaaagaaccctaaactctagagc 10058354  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  10058353 ttc-ccctttgatttcccaagtctctct 10058327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 10060672 - 10060549
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||||  |||||||||||   |||||||||||| || |||||| ||||||     
T  10060672 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccaagaggtactctaatcaaagaaccctaaactctagagc 10060576  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  10060575 ttc-ccctttgatttcccaagtctctct 10060549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 10062894 - 10062771
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||||  |||||||||||   |||||||||||| || |||||| ||||||     
T  10062894 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccaagaggtactctaatcaaagaaccctaaactctagagc 10062798  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  10062797 ttc-ccctttgatttcccaagtctctct 10062771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 10065116 - 10064993
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||||  |||||||||||   |||||||||||| || |||||| ||||||     
T  10065116 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccaagaggtactctaatcaaagaaccctaaactctagagc 10065020  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  10065019 ttc-ccctttgatttcccaagtctctct 10064993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 10067338 - 10067215
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||||  |||||||||||   |||||||||||| || |||||| ||||||     
T  10067338 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccaagaggtactctaatcaaagaaccctaaactctagagc 10067242  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  10067241 ttc-ccctttgatttcccaagtctctct 10067215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 22835175 - 22835288
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | |||||| || | |||||||||||| |||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  22835175 caagacactcaatgattttcactcacccaaggtgattacaatgtttcccaacacaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 22835273  T
Q  193 tgatttcccaagttt 207  Q
    |||||| ||||||||    
T  22835274 tgattttccaagttt 22835288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 29813027 - 29812935
Alignment:
Q  124 gtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttcttc 217  Q
    |||||| | ||| ||||||||||||||||| || ||||||||||| || ||||||| ||||||  ||||||||||||||||||||||| |||||    
T  29813027 gtgtttacaatgcttcccaacccaagagaa-ctttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttc 29812935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 53921676 - 53921799
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||| ||| | |||||| ||||||||||| || | ||||||||||||||| ||||||| ||||||  | ||    
T  53921676 caagacactcaatgattttcactcacccaaggtttttacaatgttttccaacccaagaaaacc-ctaatcaaagactctcaaccctaaagttacctcatt 53921774  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||| ||| |||||    
T  53921775 tgatttcccaagtttttctctcttc 53921799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 206
Target Start/End: Complemental strand, 16499025 - 16498913
Alignment:
Q  94 caagacactcaatgattttctct-cttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| || |  |||||||||| | ||||||| ||||| ||||||| |||||||||||||| || |||||   ||||||  ||||    
T  16499025 caagacactcaatgattttcactaccccaaggtgtttacaatgtttctcaacctaagagaa-ctctaatcaaagaccctcaacccacaagttacctcctt 16498927  T
Q  193 tgatttcccaagtt 206  Q
    ||||||||||||||    
T  16498926 tgatttcccaagtt 16498913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 2075304 - 2075364
Alignment:
Q  155 ctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttctt 216  Q
    ||||||||||||||||| ||||||| ||||||| | ||||||||||||||||||||| ||||    
T  2075304 ctctaatcaaagactctcaaccctaaagttact-catttgatttcccaagtttctctctctt 2075364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 164
Target Start/End: Complemental strand, 44331540 - 44331470
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaa 164  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| ||||||||||    
T  44331540 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaa 44331470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 195
Target Start/End: Complemental strand, 32891098 - 32890997
Alignment:
Q  94 caagacactcaatgattttctctc-ttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||  |||   |||||||||| | |||||||||| |||||||||| | |||||||||||| || ||||||| ||||||  ||||    
T  32891098 caagacactcaatgatttttactcacccaaggtgtttacaatgtttcccaccccaagagaa-ccctaatcaaagaccctcaaccctaaagttacctcctt 32891000  T
Q  193 tga 195  Q
    |||    
T  32890999 tga 32890997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 23410502 - 23410626
Alignment:
Q  94 caagacactcaatgattttctctct-tcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactc-cct 191  Q
    |||||||||||||||||||| |||  ||||||||||| | |||||| |||||||||||||| |||    ||||||| || ||||||| |||| ||| |||    
T  23410502 caagacactcaatgattttcactcactcaaggtgtttacaatgttttccaacccaagagaacctcactacaaagacactcaaccctaaagtt-ctctcct 23410600  T
Q  192 ttgatttcccaagtttctctttcttc 217  Q
    |||   |||||||||||||| |||||    
T  23410601 ttgcaatcccaagtttctctctcttc 23410626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 216
Target Start/End: Complemental strand, 5373191 - 5373096
Alignment:
Q  121 aaggtgtttccca-tgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttctt 216  Q
    ||||||||| ||| |||||||||||||||||||| || | | |||||||||| |||| || ||||||  ||||||||||  ||||||||||| ||||    
T  5373191 aaggtgtttaccaatgtttcccaacccaagagaacct-tcaccaaagactctcaaccttaaagttacctcctttgatttttcaagtttctctctctt 5373096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 9666640 - 9666763
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttccca-tgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccct 191  Q
    |||||||||||||||||||| |||  | ||||||||| | | |||||||||||  ||||||| | |||||||||||| || ||||||| ||||||  | |    
T  9666640 caagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaactgaagagaacc-ctaatcaaagaccctcaaccctaaagttacctcat 9666738  T
Q  192 ttgatttcccaagtttctctttctt 216  Q
    |||||||||| ||| ||||| ||||    
T  9666739 ttgatttccctagtgtctctctctt 9666763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 29196637 - 29196696
Alignment:
Q  157 ctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttctt 216  Q
    |||||||||||| || ||||||| ||||||  ||||||||||||||||||| ||| ||||    
T  29196637 ctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctctt 29196696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 31314440 - 31314380
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaa 153  Q
    |||||||||||||||||||| |||  | || |||||| | |||||||||||||||||||||    
T  31314440 caagacactcaatgattttcactcacccaaagtgtttacaatgtttcccaacccaagagaa 31314380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 9789300 - 9789518
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaagac 99  Q
    ||||||||||||||||||| |||||||||||||||||||  ||| |||||||||| |||| ||| ||||||| ||||| |  |  |||||| ||||||||    
T  9789300 ttacaaaagagatacaaaa-gagttacaagaaattagat-ttgacaagttcacaaggaacaaccttaatttctaccctttttc--caatctcaccaagac 9789395  T
Q  100 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttc 199  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9789396 actcaatgattttcactcaccaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttc 9789495  T
Q  200 ccaagtttctctttcttccaact 222  Q
    |||||||||||| ||||||||||    
T  9789496 ccaagtttctctctcttccaact 9789518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 18441724 - 18441942
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaagac 99  Q
    ||||||||||||||||||| |||||||||||||||||||  ||| |||||||||| |||| ||| ||||||| ||||| |  |  |||||| ||||||||    
T  18441724 ttacaaaagagatacaaaa-gagttacaagaaattagat-ttgacaagttcacaaggaacaaccctaatttctaccctttttc--caatctcaccaagac 18441819  T
Q  100 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttc 199  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18441820 actcaatgattttcactcaccaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttc 18441919  T
Q  200 ccaagtttctctttcttccaact 222  Q
    |||||||||||| ||||||||||    
T  18441920 ccaagtttctctctcttccaact 18441942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 26177974 - 26177757
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaagac 99  Q
    ||||||||||||||||||| |||||||||||||||||||  ||| |||||||||| |||| ||| ||||||| ||||| | ||   ||||| ||||||||    
T  26177974 ttacaaaagagatacaaaa-gagttacaagaaattagatt-tgacaagttcacaaagaacaaccctaatttctacccttttcc---aatctcaccaagac 26177880  T
Q  100 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttc 199  Q
    |||||||||||||| |||  |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26177879 actcaatgattttcactcaccaaggtgtttaccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttc 26177780  T
Q  200 ccaagtttctctttcttccaact 222  Q
    |||||||||||| ||||||||||    
T  26177779 ccaagtttctctctcttccaact 26177757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 16409567 - 16409349
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaagac 99  Q
    ||||||||||||||||||| |||||||||||||||||||  ||| |||||||||| |||| ||| ||||||| ||||| |  |  |||||| ||||||||    
T  16409567 ttacaaaagagatacaaaa-gagttacaagaaattagat-ttgacaagttcacaaagaacaaccctaatttctaccctttttc--caatctcaccaagac 16409472  T
Q  100 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttc 199  Q
    |||||||||||||| |||  |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16409471 actcaatgattttcactcaccaaggtgtttaccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttc 16409372  T
Q  200 ccaagtttctctttcttccaact 222  Q
    |||||||||||| ||||||||||    
T  16409371 ccaagtttctctctcttccaact 16409349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 17 - 222
Target Start/End: Complemental strand, 26170850 - 26170648
Alignment:
Q  17 aaaagagttacaagaaattagatggtga-aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaagacactcaatgattttctc 115  Q
    |||||||||||||||||||||||  ||| |||||||||| |||| | | ||||||| ||||| | |   |||||| |||||||||||||||||||||| |    
T  26170850 aaaagagttacaagaaattagat-ttgacaagttcacaaagaacaatcctaatttctacccttttc---caatctcaccaagacactcaatgattttcac 26170755  T
Q  116 tcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttct 215  Q
    ||  |||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  26170754 tcaccaaggtgtttaccatgtttcccaacccaagagaagctgtaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctctct 26170655  T
Q  216 tccaact 222  Q
    |||||||    
T  26170654 tccaact 26170648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 29720456 - 29720238
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtgaaagttcacaatgaacga-ccataatttcgaccctctgcccacaatctaaccaagac 99  Q
    ||||||||| ||||||||| |  ||||||||||||||||     ||||||||||||||| | || ||||||| ||||| | ||||  |||| ||||||||    
T  29720456 ttacaaaagggatacaaaagg--ttacaagaaattagattagacaagttcacaatgaactaaccctaatttctacccttttccca--atctcaccaagac 29720361  T
Q  100 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagttactccctttgattt 198  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || ||||||||||||||| |||||||||||||    
T  29720360 actcaatgattttctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgattt 29720262  T
Q  199 cccaagtttctctttcttccaact 222  Q
    ||||||||||||| ||||||||||    
T  29720261 cccaagtttctctctcttccaact 29720238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 29751236 - 29751454
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacga-ccataatttcgaccctctgcccacaatctaaccaaga 98  Q
    ||||||||| ||||||||| |  ||||||||||||||||  ||| ||||||||||||||| | || ||||||| ||||| | ||||  |||| |||||||    
T  29751236 ttacaaaagggatacaaaagg--ttacaagaaattagatt-tgacaagttcacaatgaacaaaccctaatttctacccttttccca--atctcaccaaga 29751330  T
Q  99 cactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagttactccctttgatt 197  Q
    |||||||||||||||||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || ||||||||||||||| ||||||||||||    
T  29751331 cactcaatgattttctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatt 29751429  T
Q  198 tcccaagtttctctttcttccaact 222  Q
    |||||||| ||||| ||||||||||    
T  29751430 tcccaagtctctctctcttccaact 29751454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 29722616 - 29722398
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtgaaagttcacaatgaacga-ccataatttcgaccctctgcccacaatctaaccaagac 99  Q
    ||||||||| ||||||||| |  ||||||||||||||||     ||||||||||||||| | || ||||||| ||||| | ||||  |||| ||||||||    
T  29722616 ttacaaaagggatacaaaagg--ttacaagaaattagattagacaagttcacaatgaactaaccctaatttctacccttttccca--atctcaccaagac 29722521  T
Q  100 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagttactccctttgattt 198  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || ||||||||||||||| |||||||||||||    
T  29722520 actcaatgattttctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgattt 29722422  T
Q  199 cccaagtttctctttcttccaact 222  Q
    ||||||||||||| | ||||||||    
T  29722421 cccaagtttctctcttttccaact 29722398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 36074218 - 36074340
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| |||||||||| |||| || |||||    
T  36074218 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctaaaccctaaagttgcttccttt 36074316  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  36074317 gatttcccaagtttctctctcttc 36074340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 13343055 - 13342933
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| ||||||||| |||| |||||||||| |||| || |||||    
T  13343055 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcagagaccctaaaccctaaagttgcttccttt 13342957  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  13342956 gatttcccaagtttctctctcttc 13342933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 30182583 - 30182461
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| |||| ||||| |||| || |||||    
T  30182583 caagacactcaatgattttcactcaccaaggtgtttgcaatgtttcccaacccaagagaa-ctctaatcaaagaccctaatccctaaagttgcttccttt 30182485  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  30182484 gatttcccaagtttctctctcttc 30182461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 25412756 - 25412634
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||  ||| |  |||||    
T  25412756 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctaaaccctaatgttgcctccttt 25412658  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  25412657 gatttcccaagtttctctctcttc 25412634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 85 - 222
Target Start/End: Complemental strand, 10593269 - 10593133
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| ||||||||||||||||||| ||||| | |||||||||||||||||||  | ||||||||||  |||||||||||| || ||||||||||||||    
T  10593269 caatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tctacccaagagatactctaatcaaagaaccctaaaccctagagt 10593171  T
Q  184 tactccctttgatttcccaagtttctctttcttccaact 222  Q
    | | |||||||||||||||||| ||||| ||||||||||    
T  10593170 t-ccccctttgatttcccaagtctctctctcttccaact 10593133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 22536366 - 22536570
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacga-ccataatttcgaccctctgcccacaatctaaccaaga 98  Q
    ||||||||| ||||||||| |  |||||||||||||| |  ||| ||||||||||||||| | || ||||||| ||||| | ||||  |||| |||||||    
T  22536366 ttacaaaagggatacaaaagg--ttacaagaaattagct--tgacaagttcacaatgaacaaaccctaatttctacccttttccca--atctcaccaaga 22536459  T
Q  99 cactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaaga-ctctaaaccctagagttactccctttgatt 197  Q
    ||||||||||||  |||||| || |||||||||||||||| | |||||||||||  ||||||||||||| | ||||||||||||| | ||||||||||||    
T  22536460 cactcaatgatt--ctctctgcagggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagcttctccctttgatt 22536556  T
Q  198 tcccaagtttctct 211  Q
    |||||||| |||||    
T  22536557 tcccaagtctctct 22536570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 28750828 - 28750951
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  28750828 caagacactcaatgattttcactcacccaaggtgttttcaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 28750926  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  28750927 tgatttcccaagtttctctctcttc 28750951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 39468722 - 39468845
Alignment:
Q  94 caagacactcaatgattttctctct-tcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  ||||||||||| | ||||||||||||||||||||| ||||||| |||||| || ||||||| ||||||  ||||    
T  39468722 caagacactcaatgattttcactcactcaaggtgtttacaatgtttcccaacccaagagaa-ctctaatgaaagaccctcaaccctaaagttacctcctt 39468820  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  39468821 tgatttcccaagtttctctctcttc 39468845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 222
Target Start/End: Complemental strand, 13239746 - 13239619
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| || |||| || ||||||  |||||    
T  13239746 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacctccttt 13239648  T
Q  194 gatttcccaagtttctctttcttccaact 222  Q
    ||||| | |||||||||| ||||| ||||    
T  13239647 gattttctaagtttctctctcttcaaact 13239619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 25078131 - 25078006
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| ||||||||||||||||||| ||||| | |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  25078131 caatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 25078033  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  25078032 ttc-ccctttgatttcccaagtctctct 25078006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 25136100 - 25135975
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| ||||||||||||||||||| ||||| | |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  25136100 caatctcaccaagacactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 25136002  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  25136001 ttc-ccctttgatttcccaagtctctct 25135975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 30683094 - 30683216
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||| ||||||||||||| |||||||||||||| || ||||||| | ||||  ||| |    
T  30683094 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcgcaacccaagagaa-ctctaatcaaagaccctcaaccctaaaattacctcctct 30683192  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  30683193 gatttcccaagtttctctctcttc 30683216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 31182968 - 31182855
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  31182968 caagacactcaatgattttcactcacctaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 31182870  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  31182869 tgatttcccaagttt 31182855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 13488198 - 13488075
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||||||||||| |||||| |||  | ||||||||| | |||||| |||||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  13488198 caagacactcaataattttcactcacccaaggtgtttacaatgttttccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 13488100  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  13488099 tgatttcccaagtttctctctcttc 13488075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 16544418 - 16544295
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  16544418 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 16544322  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  16544321 ttc-ccctttgatttcccaagtctctct 16544295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 86 - 211
Target Start/End: Complemental strand, 16546639 - 16546517
Alignment:
Q  86 aatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagtt 184  Q
    ||||| |||||||||||||||||||  |||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || ||||||||||||| |    
T  16546639 aatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagct 16546543  T
Q  185 actccctttgatttcccaagtttctct 211  Q
     | |||||||||||||||||| |||||    
T  16546542 tc-ccctttgatttcccaagtctctct 16546517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 533764 - 533641
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||| ||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| |  ||||||| ||||||  ||||    
T  533764 caagacacgcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagacccccaaccctaaagttacctcctt 533666  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||| ||||||| |||||    
T  533665 tgatttcccaaatttctctctcttc 533641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 207
Target Start/End: Original strand, 3075833 - 3075944
Alignment:
Q  96 agacactcaatgattttctctcttcaa-ggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttg 194  Q
    |||||||||||||||||| ||| |||| ||||||| | ||||||||||||||||||||| || ||||||||||| || ||||||| ||||||  ||||||    
T  3075833 agacactcaatgattttcactcatcaaaggtgtttacaatgtttcccaacccaagagaa-ctttaatcaaagaccctcaaccctaaagttacctcctttg 3075931  T
Q  195 atttcccaagttt 207  Q
    |||||| ||||||    
T  3075932 atttccaaagttt 3075944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 40380101 - 40379978
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||||  |||||| |||||  |||||||||||| || |||||||||||||     
T  40380101 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccgagagatactctaatcaaagaaccctaaaccctagagc 40380005  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  40380004 ttc-ccctttgatttcccaagtctctct 40379978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 40382312 - 40382189
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||||  |||||| |||||  |||||||||||| || |||||||||||||     
T  40382312 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccgagagatactctaatcaaagaaccctaaaccctagagc 40382216  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  40382215 ttc-ccctttgatttcccaagtctctct 40382189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 42428603 - 42428726
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | || |||||||||||||||||| ||||||||||||||  | ||||||| |||||   ||||    
T  42428603 caagacactcaatgattttcactcacccaaggtgtttacaatatttcccaacccaagagaa-ctctaatcaaagaccttcaaccctaaagttatctcctt 42428701  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  42428702 tgatttcccaagtttctctctcttc 42428726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 538020 - 537903
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||| ||||||||||| |||  | ||||||||| | ||||||||||| ||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  538020 caagacacgcaatgattttcactcacccaaggtgtttacgatgtttcccaagccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 537922  T
Q  193 tgatttcccaagtttctct 211  Q
    |||||| ||||||||||||    
T  537921 tgattttccaagtttctct 537903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 5887589 - 5887702
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||||| |||||||||||| |||  | ||||||||| | ||||||||||||||||||||| ||||||||||| || || ||||||| ||||||  ||||    
T  5887589 caagacattcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaataccctcaaccctaaagttacctcctt 5887687  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  5887688 tgatttcccaagttt 5887702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 42426408 - 42426525
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||||||||||| |||||| |||  | ||||||||| | ||||||||||| | ||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  42426408 caagacactcaataattttcactcacccaaggtgtttacaatgtttcccaatctaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 42426506  T
Q  193 tgatttcccaagtttctct 211  Q
    |||||||||||||||||||    
T  42426507 tgatttcccaagtttctct 42426525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 16452075 - 16451963
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    ||||||||||||||||| || ||   |||||||||| | |||||||| |||||||||||| |||||||||||||  || ||||||| ||||||  |||||    
T  16452075 caagacactcaatgattgtcacttaccaaggtgtttacaatgtttccgaacccaagagaa-ctctaatcaaagatcctcaaccctaaagttacctccttt 16451977  T
Q  194 gatttcccaagttt 207  Q
    ||||||||||||||    
T  16451976 gatttcccaagttt 16451963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 95 - 211
Target Start/End: Complemental strand, 32636818 - 32636702
Alignment:
Q  95 aagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    ||||||||||||||||||| |||  | ||||||||| | ||||||| | ||||||||||| |||||||||||||| || ||||||| ||||||  |||||    
T  32636818 aagacactcaatgattttcactcacccaaggtgtttacaatgtttcactacccaagagaa-ctctaatcaaagacccttaaccctaaagttacctccttt 32636720  T
Q  194 gatttcccaagtttctct 211  Q
    |||||| |||||||||||    
T  32636719 gatttctcaagtttctct 32636702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 207
Target Start/End: Complemental strand, 33831674 - 33831562
Alignment:
Q  95 aagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    ||||||||||||||||||| |||  | ||||||||| | |||||| |||||||||||||| |||||||||||||| || ||||||| | |||   |||||    
T  33831674 aagacactcaatgattttcactcacccaaggtgtttacaatgttttccaacccaagagaa-ctctaatcaaagacccttaaccctaaaattaactccttt 33831576  T
Q  194 gatttcccaagttt 207  Q
    ||||||||||||||    
T  33831575 gatttcccaagttt 33831562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 42926888 - 42926766
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||| ||||||||| ||||||||||||||  | || |||| ||||||  | ||    
T  42926888 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaatccaagagaa-ctctaatcaaagaccatcaatcctaaagttacctcatt 42926790  T
Q  193 tgatttcccaagtttctctttctt 216  Q
    ||||||||||||||| ||| ||||    
T  42926789 tgatttcccaagtttttctctctt 42926766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 8566119 - 8566233
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactct-aaaccctagagttactccct 191  Q
    |||||||||||||||||||| |||  | ||||||||| | |||||||| |||||||||||| |||||||||||||| || |  ||||| ||||||  | |    
T  8566119 caagacactcaatgattttcactcacccaaggtgtttacaatgtttccgaacccaagagaa-ctctaatcaaagaccctcatgccctaaagttacctcat 8566217  T
Q  192 ttgatttcccaagttt 207  Q
    ||||||||||||||||    
T  8566218 ttgatttcccaagttt 8566233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 42310148 - 42310225
Alignment:
Q  133 atgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctct 211  Q
    |||||| |||||| ||||||| | ||||||||||||  ||||||||| ||||||  |||||||||||||||||||||||    
T  42310148 atgttttccaaccaaagagaacc-ctaatcaaagaccataaaccctaaagttacctcctttgatttcccaagtttctct 42310225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 16407957 - 16407913
Alignment:
Q  178 tagagttactccctttgatttcccaagtttctctttcttccaact 222  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||    
T  16407957 tagagttactccctttgattttccaagtttctctctcttccaact 16407913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 19806352 - 19806295
Alignment:
Q  120 caaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccct 178  Q
    |||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||    
T  19806352 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccct 19806295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 37439127 - 37439070
Alignment:
Q  95 aagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagaga 152  Q
    ||||||||||||||||||| |||  ||| |||||| | ||||||||||||||||||||    
T  37439127 aagacactcaatgattttcactcaccaaagtgtttacaatgtttcccaacccaagaga 37439070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 32289656 - 32289442
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaagac 99  Q
    ||||||||||||||||||| |||||||||||||||||||  ||| |||||||||| |||| ||| ||||||| ||||| | ||   ||||| ||||||||    
T  32289656 ttacaaaagagatacaaaa-gagttacaagaaattagatt-tgacaagttcacaaagaacaaccctaatttctacccttttcc---aatctcaccaagac 32289562  T
Q  100 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttc 199  Q
    |||||||||||||| |||  |||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32289561 actcaatgattttcactcaccaaggtgtttaccatgtttccaaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttc 32289462  T
Q  200 ccaagtttctctttcttcca 219  Q
    |||||||||||| |||||||    
T  32289461 ccaagtttctctctcttcca 32289442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 4484406 - 4484632
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaag-- 97  Q
    ||||||||||||||||||| | ||||||||||||||| |  ||| |||||||||| |||| ||| ||||||| ||||| | | | |||| | ||||||      
T  4484406 ttacaaaagagatacaaaagg-gttacaagaaattagctt-tgacaagttcacaaagaacaaccctaatttctacccttttctcccaatttcaccaagaa 4484503  T
Q  98 ----acactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
        |||||||||||||| | |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  4484504 caagacactcaatgatttacactcaccaaggtgtttacaatgtttcccaacccaagagaagctctaatcaaagaccctaaaccctagagttactcccttt 4484603  T
Q  194 gatttcccaagtttctctttcttccaact 222  Q
    |||||||||||||||||| ||||||||||    
T  4484604 gatttcccaagtttctctctcttccaact 4484632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 6266783 - 6266569
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacga-ccataatttcgaccctctgcccacaatctaaccaaga 98  Q
    ||||||||| ||||||||| |  ||||||||||||||||  ||| ||||||||||||||| | || ||||||| ||||| | ||||  |||| |||||||    
T  6266783 ttacaaaagggatacaaaagg--ttacaagaaattagatt-tgacaagttcacaatgaacaaaccctaatttctacccttttccca--atctcaccaaga 6266689  T
Q  99 cactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagttactccctttgatt 197  Q
    |||||||||||||||||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || ||||||||||||||| ||||||||||||    
T  6266688 cactcaatgattttctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatt 6266590  T
Q  198 tcccaagtttctctttcttcc 218  Q
    |||||||| ||||| ||||||    
T  6266589 tcccaagtctctctctcttcc 6266569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 36205837 - 36205959
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| |||| || |||||    
T  36205837 caagacactcaatgattttcactcaccaaggtgtttaccatgtttcccaacccaagagaa-ctctaatcaaagaccctaaaccctaaagttgcttccttt 36205935  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  36205936 gatttcccaagtttctctctcttc 36205959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 45099749 - 45099627
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| |||||||||| |||| || |||||    
T  45099749 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctaaaccctaaagttgcttccttt 45099651  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  45099650 gatttcccaagtttctctctcttc 45099627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 30833438 - 30833215
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaaga- 98  Q
    ||||||||||||||||||| | ||||||||||||||  |  ||| |||||||||| |||| ||| ||||||| ||||| | | | |||||| |||||||     
T  30833438 ttacaaaagagatacaaaagg-gttacaagaaattaactt-tgacaagttcacaaagaacaaccctaatttctacccttttctcccaatctcaccaagaa 30833341  T
Q  99 -----cactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
         ||||||||||||| | |||  ||| |||||| | |||||||||||||||||| || ||||||||||| || ||||||||||||||||||||||||    
T  30833340 caagacactcaatgatttacactcaccaaagtgtttacaatgtttcccaacccaagataagctctaatcaaaaaccctaaaccctagagttactcccttt 30833241  T
Q  194 gatttcccaagtttctctttcttcca 219  Q
    |||||||||||||||| | |||||||    
T  30833240 gatttcccaagtttctttctcttcca 30833215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 4503306 - 4503428
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||  |||||||||| |||| || |||||    
T  4503306 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaacctaaaccctaaagttgcttccttt 4503404  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  4503405 gatttcccaagtttctctctcttc 4503428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 36988249 - 36988371
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  |||||    
T  36988249 caagacactcaatgattttcactcaccaaggtgtttactatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctccttt 36988347  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  36988348 gatttcccaagtttctctctcttc 36988371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 2334591 - 2334713
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| ||||||||||| || || ||||||| ||||||  |||||    
T  2334591 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaataccctcaaccctaaagttacctccttt 2334689  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  2334690 gatttcccaagtttctctctcttc 2334713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 5723428 - 5723550
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| | |||||||| |||| |  |||||    
T  5723428 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccccaaaccctaaagttgcctccttt 5723526  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  5723527 gatttcccaagtttctctctcttc 5723550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 39284880 - 39284757
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||| |||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  39284880 caagatactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 39284782  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  39284781 tgatttcccaagtttctctctcttc 39284757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 42362347 - 42362234
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  42362347 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 42362249  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  42362248 tgatttcccaagttt 42362234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 12647544 - 12647667
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||  |||||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  12647544 caatctcaccaagacactcaatga--ttctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 12647640  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  12647641 ttc-ccctttgatttcccaagtctctct 12647667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 723917 - 724030
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | |||||||||||||||| |||| |||||||||||||| || ||||||| ||||||  ||||    
T  723917 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaaaagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 724015  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  724016 tgatttcccaagttt 724030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 11151764 - 11151877
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||| |||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  11151764 caagagactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 11151862  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  11151863 tgatttcccaagttt 11151877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 11690496 - 11690383
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| || ||||||||||| || ||||||| ||||||  ||||    
T  11690496 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctataatcaaagaccctcaaccctaaagttacctcctt 11690398  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  11690397 tgatttcccaagttt 11690383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 34139944 - 34140057
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| ||||||||||||||| | ||||||| ||||||  ||||    
T  34139944 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagactttcaaccctaaagttacctcctt 34140042  T
Q  193 tgatttcccaagttt 207  Q
    |||||| ||||||||    
T  34140043 tgattttccaagttt 34140057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 38312235 - 38312112
Alignment:
Q  94 caagacactcaatgattttctctctt-caaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||   |||||||| | | ||||||||||||||||||||| |||||||||||||  || ||||||| ||||||  ||||    
T  38312235 caagacactcaatgattttcactcacacaaggtgtatacaatgtttcccaacccaagagaa-ctctaatcaaagaacctcaaccctaaagttacctcctt 38312137  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||| ||||||| |||||    
T  38312136 tgatttcccaaatttctctctcttc 38312112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 36318182 - 36318304
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | || ||||||||||||||| || ||||||||||||||  | ||||||| ||||||  ||||    
T  36318182 caagacactcaatgattttcactcacccaaggtgtttacaatatttcccaacccaagataa-ctctaatcaaagacattcaaccctaaagttacctcctt 36318280  T
Q  193 tgatttcccaagtttctctttctt 216  Q
    ||||||||||||||||||| ||||    
T  36318281 tgatttcccaagtttctctctctt 36318304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 6595180 - 6595302
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||| |||||||| || |||| ||| |||||| | || ||||||| |||||||||| |||||||||||||| || ||||||| ||||||  | |||    
T  6595180 caagacacccaatgattctcactctccaaagtgtttacaatttttcccagcccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcattt 6595278  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    ||||||| |||||||||| |||||    
T  6595279 gatttcctaagtttctctctcttc 6595302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 29867864 - 29867742
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||| | ||||||   |||    
T  29867864 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaacccaatagttaccttctt 29867766  T
Q  193 tgatttcccaagtttctctttctt 216  Q
    ||||| || |||||||||| ||||    
T  29867765 tgattcccaaagtttctctctctt 29867742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 14633999 - 14634112
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | |||||||||||||||| |||| ||||||||||| || || ||| ||| ||||||  ||||    
T  14633999 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaaaagaa-ctctaatcaaaaaccctcaactctaaagttacctcctt 14634097  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  14634098 tgatttcccaagttt 14634112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 222
Target Start/End: Original strand, 17057542 - 17057670
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | || |||||||||||||||||| ||||||||||||||  | ||||||| ||||||  || |    
T  17057542 caagacactcaatgattttcactcacccaaggtgtttacaatatttcccaacccaagagaa-ctctaatcaaagaccttcaaccctaaagttacctccgt 17057640  T
Q  193 tgatttcccaagtttctctttcttccaact 222  Q
    |||||||| || ||||||| ||||| ||||    
T  17057641 tgatttccaaattttctctctcttcaaact 17057670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 222
Target Start/End: Original strand, 17085525 - 17085653
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | || |||||||||||||||||| ||||||||||||||  | ||||||| ||||||  || |    
T  17085525 caagacactcaatgattttcactcacccaaggtgtttacaatatttcccaacccaagagaa-ctctaatcaaagaccttcaaccctaaagttacctccgt 17085623  T
Q  193 tgatttcccaagtttctctttcttccaact 222  Q
    |||||||| || ||||||| ||||| ||||    
T  17085624 tgatttccaaattttctctctcttcaaact 17085653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 33162650 - 33162745
Alignment:
Q  120 caaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttctt 216  Q
    |||||||||| | |||||||||||| |||||||| | |||||||||||| || ||||||| | ||||  ||||||||||||||||||||||| ||||    
T  33162650 caaggtgtttacaatgtttcccaactcaagagaacc-ctaatcaaagaccctcaaccctaaaattacctcctttgatttcccaagtttctctctctt 33162745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 207
Target Start/End: Original strand, 14202607 - 14202693
Alignment:
Q  120 caaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagttt 207  Q
    |||||||||| | ||||||||||||||||||||| |||||||||||||| || |||| || ||||||  | |||||||||||||||||    
T  14202607 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacctcatttgatttcccaagttt 14202693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 24885656 - 24885583
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaaga 167  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||| ||||| |||||||||||||    
T  24885656 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccatgagaa-ctctaatcaaaga 24885583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 36773557 - 36773497
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaa 153  Q
    |||||||||||||||||||| |||  | ||||||||| | |||||||||||||||||||||    
T  36773557 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa 36773497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 36773481 - 36773422
Alignment:
Q  157 ctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttctt 216  Q
    |||||||||||| || ||||||| ||||||  ||||||||||||| ||||||||| ||||    
T  36773481 ctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctctt 36773422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 41586401 - 41586324
Alignment:
Q  134 tgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctct 211  Q
    ||||| |||||||||||||| |||| | ||||||| || ||||||| ||||||  | | |||||| ||||||||||||    
T  41586401 tgttttccaacccaagagaagctctcaccaaagacactcaaccctaaagttacatcatctgatttaccaagtttctct 41586324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 11237 - 11463
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtgaaagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaag--- 97  Q
    ||||||||||||||||||| | |||||||||||||||||  |  |||||||||| |||| ||| ||||||| ||||| | | | |||||| ||||||       
T  11237 ttacaaaagagatacaaaagg-gttacaagaaattagattttacaagttcacaaagaacaaccctaatttctacccttttctcccaatctcaccaagaac 11335  T
Q  98 ---acactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttg 194  Q
       |||||||||||||| | |||  |||||||||| | ||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  11336 aagacactcaatgatttacactcaccaaggtgtttacaatgtttcccaacccaagagaagctctaatcaaagaccataaaccctagagttactccctttg 11435  T
Q  195 atttcccaagtttctctttcttccaact 222  Q
    ||||||||||||||||| ||||||||||    
T  11436 atttcccaagtttctctctcttccaact 11463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 8811 - 9037
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtgaaagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaag--- 97  Q
    ||||||||||||||||||| | |||||||||||||||||  |  |||||||||| |||| ||| ||||||| ||||| | | | |||||| ||||||       
T  8811 ttacaaaagagatacaaaagg-gttacaagaaattagattttataagttcacaaagaacaaccctaatttctacccttttctcccaatctcaccaagaac 8909  T
Q  98 ---acactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttg 194  Q
       |||||||||| ||| | |||  |||||| ||| | ||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  8910 aagacactcaatggtttacactcaccaaggtctttacaatgtttcccaacccaagagaagctctaatcaaagaccctaaagcctagagttactccctttg 9009  T
Q  195 atttcccaagtttctctttcttccaact 222  Q
    ||||||||||||||||| ||||||||||    
T  9010 atttcccaagtttctctctcttccaact 9037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 2e-48; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 40282469 - 40282251
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtgaaagttcacaatgaacga-ccataatttcgaccctctgcccacaatctaaccaagac 99  Q
    ||||||||| ||||||||| |  ||||||||||||||||     ||||||||||||||| | || ||||||| ||||| | ||||  |||| ||||||||    
T  40282469 ttacaaaagggatacaaaagg--ttacaagaaattagattagacaagttcacaatgaactaaccctaatttctacccttttccca--atctcaccaagac 40282374  T
Q  100 actcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagttactccctttgattt 198  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || ||||||||||||||| |||||||||||||    
T  40282373 actcaatgattttctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgattt 40282275  T
Q  199 cccaagtttctctttcttccaact 222  Q
    ||||||||||||| ||||||||||    
T  40282274 cccaagtttctctctcttccaact 40282251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 9987251 - 9987076
Alignment:
Q  45 aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaac 144  Q
    ||||||||||||||| ||| ||||||| ||||| | ||||  |||| ||||||||||||||||||||||||||| |||||||||||||||||||  ||||    
T  9987251 aagttcacaatgaacaaccctaatttctacccttttccca--atctcaccaagacactcaatgattttctctctacaaggtgtttcccatgttt-tcaac 9987155  T
Q  145 ccaagagaatctctaatcaaag-actctaaaccctagagttactccctttgatttcccaagtttctctttcttccaact 222  Q
    ||||||||  |||||||||||| || ||||||||||||||| |||||||||||||||||||| | ||| ||||||||||    
T  9987154 ccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctatctctcttccaact 9987076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 85 - 222
Target Start/End: Complemental strand, 21053969 - 21053832
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| ||||||||||||||||||||| ||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || ||||||||||||||    
T  21053969 caatctcaccaagacactcaatgattttttctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagt 21053871  T
Q  184 tactccctttgatttcccaagtttctctttcttccaact 222  Q
    | |||||||||||||||||||| ||||| ||||||||||    
T  21053870 tgctccctttgatttcccaagtctctctctcttccaact 21053832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 94 - 222
Target Start/End: Complemental strand, 51765389 - 51765262
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||| | |||  |||||||||| | |||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  51765389 caagacactcaatgatttacactcaccaaggtgtttacaatgtttcc-aacccaagagaagctctaatcaaagaccctaaaccctagagttactcccttt 51765291  T
Q  194 gatttcccaagtttctctttcttccaact 222  Q
    |||||||||||||||||  ||||||||||    
T  51765290 gatttcccaagtttctcactcttccaact 51765262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 211
Target Start/End: Original strand, 20622335 - 20622521
Alignment:
Q  23 gttacaagaaattagatggtga-aagttcacaatgaacgaccataatttcgaccctctgcccacaatctaaccaagacactcaatgattttctctcttca 121  Q
    |||||||||||||||||  ||| ||||||||||||||| ||| ||||||| ||||| | ||||  |||| ||||||||| |||||||||||| |||| ||    
T  20622335 gttacaagaaattagatt-tgacaagttcacaatgaacaaccctaatttctacccttttccca--atctcaccaagacagtcaatgattttccctctaca 20622431  T
Q  122 aggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagttactccctttgatttcccaagtttctct 211  Q
    |||||||||||||||||  ||||||||||||  |||||||||||| || ||||||||||||||| |||| ||||||||||||||| |||||    
T  20622432 aggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagttgctccatttgatttcccaagtctctct 20622521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 20762666 - 20762544
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    ||||| |||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| |||||||||| |||| || |||||    
T  20762666 caagatactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctaaaccctaaagttgcttccttt 20762568  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  20762567 gatttcccaagtttctctctcttc 20762544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 9036508 - 9036298
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattagatggtga-aagttcacaatgaacga-ccataatttcgaccctctgcccacaatctaaccaaga 98  Q
    ||||||||| ||||||||| |  |||||||||||||| |  ||| ||||||||||||||| | || ||||||| ||||| | ||||  |||| |||||||    
T  9036508 ttacaaaagggatacaaaagg--ttacaagaaattagct--tgacaagttcacaatgaacaaaccctaatttctacccttttccca--atctcaccaaga 9036415  T
Q  99 cactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagttactccctttgatt 197  Q
    |||||||||||| ||||| | |||||||||||||||||||  ||||||||||||  |||||||||||| || ||||||||||||||| | ||||||||||    
T  9036414 cactcaatgattctctctttacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagttgc-ccctttgatt 9036317  T
Q  198 tcccaagtttctctttctt 216  Q
    |||||||| ||||| ||||    
T  9036316 tcccaagtctctctctctt 9036298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 219
Target Start/End: Complemental strand, 3156860 - 3156736
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  || ||||||| | |||||||| |||||||||||| |||||||||||||| || ||||||| ||||||  |||||    
T  3156860 caagacactcaatgattttcactcaccagggtgtttacaatgtttccaaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctccttt 3156762  T
Q  194 gatttcccaagtttctctttcttcca 219  Q
    |||||||||||||||||| |||||||    
T  3156761 gatttcccaagtttctctctcttcca 3156736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 3189325 - 3189203
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    ||||||||||| |||||||| |||  |||||||||| | ||||||||||||||||||||| || ||||||||||| || ||||||| ||||||  |||||    
T  3189325 caagacactcagtgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctttaatcaaagaccctcaaccctaaagttacctccttt 3189227  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  3189226 gatttcccaagtttctctctcttc 3189203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 3198142 - 3198020
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    ||||||||||| |||||||| |||  |||||||||| | ||||||||||||||||||||| || ||||||||||| || ||||||| ||||||  |||||    
T  3198142 caagacactcagtgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctttaatcaaagaccctcaaccctaaagttacctccttt 3198044  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  3198043 gatttcccaagtttctctctcttc 3198020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 3206981 - 3206859
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    ||||||||||| |||||||| |||  |||||||||| | ||||||||||||||||||||| || ||||||||||| || ||||||| ||||||  |||||    
T  3206981 caagacactcagtgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctttaatcaaagaccctcaaccctaaagttacctccttt 3206883  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  3206882 gatttcccaagtttctctctcttc 3206859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 120 - 217
Target Start/End: Original strand, 13316518 - 13316614
Alignment:
Q  120 caaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttcttc 217  Q
    |||||||||| | ||||||||||||||||||||| |||||||||||||| |||||||||| |||| || ||||||||||||||||||||||| |||||    
T  13316518 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctaaaccctaaagttgctacctttgatttcccaagtttctctctcttc 13316614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 28223594 - 28223717
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||| | | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  28223594 caagacactcaatgattttcactcacccaaggtgtcttcaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 28223692  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  28223693 tgatttcccaagtttctctctcttc 28223717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 31659233 - 31659110
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | |||||||| |||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  31659233 caagacactcaatgattttcactcacccaaggtgtttacaatgtttccgaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 31659135  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  31659134 tgatttcccaagtttctctctcttc 31659110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 217
Target Start/End: Original strand, 28220400 - 28220522
Alignment:
Q  95 aagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    ||||||||||||||||||| |||  | ||||||||| | ||| ||||||||||||||||| |||||||||||||| || ||||||| ||||||  |||||    
T  28220400 aagacactcaatgattttcactcacccaaggtgttttcaatgcttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctccttt 28220498  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  28220499 gatttcccaagtttctctctcttc 28220522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 10925218 - 10925095
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| || ||||||||||| || ||||||| ||||||  ||||    
T  10925218 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctataatcaaagaccctcaaccctaaagttacctcctt 10925120  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    |||||| |||||||||||| |||||    
T  10925119 tgattttccaagtttctctctcttc 10925095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 211
Target Start/End: Complemental strand, 44203642 - 44203519
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  44203642 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 44203546  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  44203545 ttc-ccctttgatttcccaagtctctct 44203519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 197081 - 197194
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||    
T  197081 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 197179  T
Q  193 tgatttcccaagttt 207  Q
    |||||| ||||||||    
T  197180 tgattttccaagttt 197194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 3847294 - 3847407
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||||||||||| |||||||||||||| ||  |||||| ||||||  ||||    
T  3847294 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcgaccctaaagttacctcctt 3847392  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  3847393 tgatttcccaagttt 3847407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 1833517 - 1833394
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||| ||||||||| |||||||||||||| || |||| || |||||   ||||    
T  1833517 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaatccaagagaa-ctctaatcaaagaccctcaaccttaaagttatctcctt 1833419  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  1833418 tgatttcccaagtttctctctcttc 1833394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 13138147 - 13138269
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | |||||||||| |||||||||| | |||||||||||| || ||||||| ||||||  ||||    
T  13138147 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaccccaagagaacc-ctaatcaaagaccctcaaccctaaagttacctcctt 13138245  T
Q  193 tgatttcccaagtttctctttctt 216  Q
    ||||||||||||||| ||| ||||    
T  13138246 tgatttcccaagtttttctctctt 13138269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 15820302 - 15820180
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | |||||||||||| |||||||| |||||||||||||| || ||||||| ||||||  | ||    
T  15820302 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaactcaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcttt 15820204  T
Q  193 tgatttcccaagtttctctttctt 216  Q
    ||||||||||||||| ||| ||||    
T  15820203 tgatttcccaagtttttctctctt 15820180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 834340 - 834453
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| | |  | ||||||||| | ||||||||||||||||||||| || ||||||||||| || ||||||| ||||||  ||||    
T  834340 caagacactcaatgattttcacgcacccaaggtgtttacaatgtttcccaacccaagagaa-ctttaatcaaagaccctcaaccctaaagttacctcctt 834438  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  834439 tgatttcccaagttt 834453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 44455155 - 44455038
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||| ||||| |||  | ||||||||| | |||||||||||||||||| || |||||||||||||| || ||||||| ||||||  ||||    
T  44455155 caagacactcaatggttttcactcacccaaggtgtttacaatgtttcccaacccaagaaaa-ctctaatcaaagaccctcaaccctaaagttacctcctt 44455057  T
Q  193 tgatttcccaagtttctct 211  Q
    |||||| ||||||||||||    
T  44455056 tgatttaccaagtttctct 44455038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 37503727 - 37503850
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | || ||| ||||||||| |||| |||||||||||||| || ||||||| ||| ||  ||||    
T  37503727 caagacactcaatgattttcactcacccaaggtgtttacaatattttccaacccaatagaa-ctctaatcaaagaccctcaaccctaaagtcacctcctt 37503825  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||||||||||||||| |||||    
T  37503826 tgatttcccaagtttctctctcttc 37503850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 49918345 - 49918221
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttccca-tgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccct 191  Q
    |||||||||||||||||||| |||  | |||||||||   | |||||||||| ||||||||| ||||||||||||||  | ||||||| ||||||  |||    
T  49918345 caagacactcaatgattttcactcacccaaggtgttttataatgtttcccaatccaagagaa-ctctaatcaaagaccttcaaccctaaagttacctcct 49918247  T
Q  192 ttgatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||||| |||||    
T  49918246 ttgatttcccaagtttctctctcttc 49918221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 8550960 - 8551073
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | || |||||| | |||||||  |||||||||||| |||||||||||||| || ||||||| |||||   ||||    
T  8550960 caagacactcaatgattttcactcacccaatgtgtttacaatgtttcttaacccaagagaa-ctctaatcaaagacccttaaccctaaagttaactcctt 8551058  T
Q  193 tgatttcccaagttt 207  Q
    |||||||||||||||    
T  8551059 tgatttcccaagttt 8551073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 206
Target Start/End: Original strand, 4552810 - 4552922
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||| ||||||||||||| ||| ||| |||||| || ||||||| ||||||  ||||    
T  4552810 caagacactcaatgattttccctcacccaaggtgtttacaatgtttctcaacccaagagaacctc-aattaaagaccctcaaccctaaagttacctcctt 4552908  T
Q  193 tgatttcccaagtt 206  Q
    | ||||||||||||    
T  4552909 taatttcccaagtt 4552922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 206
Target Start/End: Original strand, 13659509 - 13659621
Alignment:
Q  94 caagacactcaatgattttctct-cttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| || |  |||||||||| | ||||||| ||||| ||||||| |||||||||||||| || |||||   ||||||  ||||    
T  13659509 caagacactcaatgattttcactaccccaaggtgtttacaatgtttctcaacctaagagaa-ctctaatcaaagaccctcaacccacaagttacctcctt 13659607  T
Q  193 tgatttcccaagtt 206  Q
    ||||||||||||||    
T  13659608 tgatttcccaagtt 13659621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 23555465 - 23555560
Alignment:
Q  120 caaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttctt 216  Q
    |||||||||| | ||||||||||||||||||||| || ||||||||||  || ||||||  ||||||  ||||||||||||||||||| ||| ||||    
T  23555465 caaggtgtttacaatgtttcccaacccaagagaa-ctttaatcaaagatcctcaaccctgaagttacctcctttgatttcccaagtttttctctctt 23555560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 37560042 - 37560165
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | || |||||| | |||||| | |||||||||||| |||||||||||||| || |||| || ||||||  | ||    
T  37560042 caagacactcaatgattttcactcacctaatgtgtttacaatgttttcaaacccaagagaa-ctctaatcaaagaccctcaaccttaaagttacctcatt 37560140  T
Q  193 tgatttcccaagtttctctttcttc 217  Q
    ||||||| ||||||||||| |||||    
T  37560141 tgatttctcaagtttctctctcttc 37560165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 928150 - 928264
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttccca-tgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccct 191  Q
    ||||||||||| |||||||| |||  | ||||||||| | | |||||||||||||||||||||| ||||||||||||  | |||| || ||||||  |||    
T  928150 caagacactcattgattttcactcacccaaggtgtttacaaatgtttcccaacccaagagaatc-ctaatcaaagaccttcaaccataaagttacctcct 928248  T
Q  192 ttgatttcccaagttt 207  Q
    ||||||||||||||||    
T  928249 ttgatttcccaagttt 928264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 50169383 - 50169505
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||  | ||||| ||| | |||||||||||||||||| || | ||||| ||| || || ||||||| ||||||  ||||    
T  50169383 caagacactcaatgattttcactcacccaaggtatttacaatgtttcccaacccaagataacc-ctaataaaaaaccctcaaccctaaagttacctcctt 50169481  T
Q  193 tgatttcccaagtttctctttctt 216  Q
    ||||||||| ||||||||| ||||    
T  50169482 tgatttccctagtttctctctctt 50169505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 217
Target Start/End: Original strand, 30476648 - 30476744
Alignment:
Q  120 caaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttcttc 217  Q
    |||||||||| | ||||||||||||||||||||| ||||||||||| || || | |||||   ||||  | ||||||||||||||||||||| |||||    
T  30476648 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaataccctcagccctaacattacatcatttgatttcccaagtttctctctcttc 30476744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 50167348 - 50167408
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaa 153  Q
    |||||||||||||||||||| |||  | ||||||||| | |||||||||||||||||||||    
T  50167348 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacccaagagaa 50167408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 28265802 - 28265861
Alignment:
Q  157 ctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttctt 216  Q
    |||||||||||| || ||||||| ||||||  ||||||||||||| ||||||||| ||||    
T  28265802 ctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctctt 28265861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 45644528 - 45644650
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    ||||||||| |||||||||| |||  | ||| ||||| | |||||| |||||| ||||||| | |||||||||||| || ||||||| |||||   ||||    
T  45644528 caagacacttaatgattttcactcacccaagatgtttacaatgttttccaacctaagagaacc-ctaatcaaagaccctcaaccctaaagttatctcctt 45644626  T
Q  193 tgatttcccaagtttctctttctt 216  Q
    ||||||||| ||||| ||| ||||    
T  45644627 tgatttccctagtttttctctctt 45644650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 46064913 - 46064791
Alignment:
Q  94 caagacactcaatgattttctctc-ttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| |||   |||||||||| | |||||| ||| |||||||||| |  ||||||||||| || |||  || ||||||   |||    
T  46064913 caagacactcaatgattttcactcacccaaggtgtttacaatgttttccaccccaagagaa-ccataatcaaagaccctcaacaataaagttaccttctt 46064815  T
Q  193 tgatttcccaagtttctctttctt 216  Q
    ||||||||||||||| ||| ||||    
T  46064814 tgatttcccaagtttttctctctt 46064791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 50167424 - 50167483
Alignment:
Q  157 ctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttctt 216  Q
    |||||||||||| || ||||||| ||||||  ||||||||||||| ||||||||| ||||    
T  50167424 ctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctctt 50167483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 28265727 - 28265787
Alignment:
Q  94 caagacactcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaa 153  Q
    |||||||||||||||||||| |||  | ||||||||| | ||||||||||||| |||||||    
T  28265727 caagacactcaatgattttcactcacccaaggtgtttacaatgtttcccaacctaagagaa 28265787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 40122398 - 40122493
Alignment:
Q  120 caaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttctt 216  Q
    |||||||||| | ||||||||||| |||||| || ||||||| || ||  || |||| || ||||||  ||||||||||||||||||| ||| ||||    
T  40122398 caaggtgtttacaatgtttcccaatccaagataa-ctctaattaatgatcctcaaccataaagttacctcctttgatttcccaagtttttctctctt 40122493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 51765489 - 51765453
Alignment:
Q  1 ttacaaaagagatacaaaaagagttacaagaaattag 37  Q
    ||||||||||||||||||| | |||||||||||||||    
T  51765489 ttacaaaagagatacaaaaggggttacaagaaattag 51765453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 911 - 789
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||||||||||| |||||||||||||| |||||||||| |||| || |||||    
T  911 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctaaaccctaaagttgctgccttt 813  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  812 gatttcccaagtttctctctcttc 789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 434527 - 434405
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactcccttt 193  Q
    |||||||||||||||||||| |||  |||||| ||| |||||||| |||||||||||||| |||||||||||||| |||||||||| |||| || |||||    
T  434527 caagacactcaatgattttcactcaccaaggtatttaccatgttttccaacccaagagaa-ctctaatcaaagaccctaaaccctaaagttgcttccttt 434429  T
Q  194 gatttcccaagtttctctttcttc 217  Q
    |||||||||||||||||| |||||    
T  434428 gatttcccaagtttctctctcttc 434405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 85 - 221
Target Start/End: Complemental strand, 6283 - 6150
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaaga-ctctaaaccctagagt 183  Q
    |||||| |||||||||||||||||||  |||||| ||||||||||||||||||| | |||||||||||  ||||||||||||| | ||||||||||||||    
T  6283 caatctcaccaagacactcaatgatt--ctctctacaaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagt 6187  T
Q  184 tactccctttgatttcccaagtttctctttcttccaac 221  Q
    | | |||||||||||||||||| ||||| |||||||||    
T  6186 tgc-ccctttgatttcccaagtctctctctcttccaac 6150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 3884 - 4007
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||  |||||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  3884 caatctcaccaagacactcaatga--ttctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 3980  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  3981 ttc-ccctttgatttcccaagtctctct 4007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 2762 - 2885
Alignment:
Q  85 caatctaaccaagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaag-actctaaaccctagagt 183  Q
    |||||| |||||||||||||||||  |||||||| |||||||||||||||||||  ||||||||||||  |||||||||||| || |||||||||||||     
T  2762 caatctcaccaagacactcaatga--ttctctctacaaggtgtttcccatgttt-tcaacccaagagatactctaatcaaagaaccctaaaccctagagc 2858  T
Q  184 tactccctttgatttcccaagtttctct 211  Q
    | | |||||||||||||||||| |||||    
T  2859 ttc-ccctttgatttcccaagtctctct 2885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 22286 - 22216
Alignment:
Q  147 aagagaatctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttcttc 217  Q
    ||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  22286 aagagaaactctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagtttctctctcttc 22216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 11552 - 11502
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaac 144  Q
    |||||||||||||||||||| |||  |||||||||| | ||||||||||||    
T  11552 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaac 11502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 100 - 217
Target Start/End: Original strand, 20594 - 20711
Alignment:
Q  100 actcaatgattttctctcttc-aaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctttgattt 198  Q
    |||||||||||||| |||  | ||||||||| | |||| ||||||||||||| || |||||||||||||| || ||||||| ||||||  ||||||||||    
T  20594 actcaatgattttcactcacccaaggtgtttacaatgtctcccaacccaagataa-ctctaatcaaagaccctcaaccctaaagttacctcctttgattt 20692  T
Q  199 cccaagtttctctttcttc 217  Q
    || |||||||||| |||||    
T  20693 ccaaagtttctctctcttc 20711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 206
Target Start/End: Original strand, 149270 - 149382
Alignment:
Q  94 caagacactcaatgattttctct-cttcaaggtgtttcccatgtttcccaacccaagagaatctctaatcaaagactctaaaccctagagttactccctt 192  Q
    |||||||||||||||||||| || |  |||||||||| | ||||||| ||||| ||||||| |||||||||||||| || |||||   ||||||  ||||    
T  149270 caagacactcaatgattttcactaccccaaggtgtttacaatgtttctcaacctaagagaa-ctctaatcaaagaccctcaacccacaagttacctcctt 149368  T
Q  193 tgatttcccaagtt 206  Q
    ||||||||||||||    
T  149369 tgatttcccaagtt 149382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 114597 - 114538
Alignment:
Q  94 caagacactcaatgattttctctcttcaaggtgtttcccatgtttcccaacccaagagaa 153  Q
    |||||||||||||||||||| |||  |||||||||| | |||||||||||||||||||||    
T  114597 caagacactcaatgattttcactcaccaaggtgtttacaatgtttcccaacccaagagaa 114538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 114522 - 114462
Alignment:
Q  157 ctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctttcttc 217  Q
    |||||||||||| || ||||||| ||||||  ||||||||||| ||||||||||| |||||    
T  114522 ctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttc 114462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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