View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1591_high_6 (Length: 311)

Name: NF1591_high_6
Description: NF1591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1591_high_6
NF1591_high_6
[»] chr4 (21 HSPs)
chr4 (18-295)||(45172733-45173010)
chr4 (18-179)||(34982038-34982199)
chr4 (18-177)||(55134024-55134183)
chr4 (70-178)||(39372816-39372927)
chr4 (70-169)||(28463743-28463845)
chr4 (70-180)||(21168853-21168966)
chr4 (74-177)||(23256394-23256499)
chr4 (74-177)||(11681902-11682008)
chr4 (74-177)||(11690181-11690287)
chr4 (76-183)||(53011509-53011618)
chr4 (70-180)||(19661177-19661289)
chr4 (70-180)||(32130944-32131057)
chr4 (67-177)||(51066738-51066851)
chr4 (74-178)||(21791711-21791816)
chr4 (70-170)||(29579654-29579757)
chr4 (76-179)||(27632199-27632303)
chr4 (96-170)||(10575730-10575803)
chr4 (74-180)||(29221782-29221891)
chr4 (70-119)||(44477897-44477947)
chr4 (81-180)||(41038045-41038146)
chr4 (81-121)||(16072270-16072310)
[»] chr8 (17 HSPs)
chr8 (18-180)||(34524040-34524202)
chr8 (24-180)||(39698033-39698188)
chr8 (25-144)||(12531410-12531527)
chr8 (18-137)||(23567363-23567480)
chr8 (63-173)||(32098325-32098438)
chr8 (70-180)||(43926478-43926591)
chr8 (66-178)||(41666088-41666196)
chr8 (76-179)||(44665202-44665308)
chr8 (70-187)||(7857876-7857994)
chr8 (70-117)||(3445544-3445591)
chr8 (77-180)||(18111611-18111717)
chr8 (81-180)||(3471390-3471492)
chr8 (74-120)||(18420770-18420817)
chr8 (81-180)||(42951940-42952042)
chr8 (76-179)||(13585098-13585204)
chr8 (70-99)||(1003969-1003998)
chr8 (74-121)||(42777609-42777657)
[»] chr5 (20 HSPs)
chr5 (18-180)||(43511431-43511593)
chr5 (18-180)||(4734671-4734832)
chr5 (18-177)||(20975800-20975960)
chr5 (18-182)||(42291970-42292133)
chr5 (18-178)||(29156004-29156165)
chr5 (18-177)||(3349817-3349975)
chr5 (18-180)||(10591362-10591521)
chr5 (21-136)||(17514028-17514154)
chr5 (18-173)||(5829213-5829360)
chr5 (74-177)||(8398778-8398884)
chr5 (70-178)||(12661102-12661213)
chr5 (70-180)||(13423657-13423770)
chr5 (70-120)||(13656067-13656117)
chr5 (81-179)||(40956107-40956206)
chr5 (81-183)||(931169-931273)
chr5 (70-120)||(26311864-26311915)
chr5 (81-179)||(19099481-19099582)
chr5 (70-178)||(26377930-26378042)
chr5 (71-160)||(13288442-13288534)
chr5 (70-98)||(36718723-36718751)
[»] chr3 (19 HSPs)
chr3 (18-179)||(48627118-48627279)
chr3 (18-178)||(43905932-43906076)
chr3 (70-180)||(8363968-8364081)
chr3 (70-179)||(51939710-51939822)
chr3 (70-183)||(41707210-41707326)
chr3 (70-180)||(27110962-27111074)
chr3 (70-180)||(29387909-29388022)
chr3 (70-180)||(46791852-46791965)
chr3 (70-180)||(23067881-23067993)
chr3 (70-177)||(21784938-21785048)
chr3 (70-179)||(52655280-52655390)
chr3 (70-180)||(6715247-6715360)
chr3 (70-180)||(23164726-23164838)
chr3 (70-179)||(24252416-24252528)
chr3 (70-183)||(27729924-27730038)
chr3 (70-178)||(51064299-51064408)
chr3 (70-120)||(18408050-18408101)
chr3 (118-180)||(29843864-29843926)
chr3 (30-63)||(18408121-18408154)
[»] chr7 (22 HSPs)
chr7 (18-180)||(26282631-26282793)
chr7 (18-180)||(1365822-1365984)
chr7 (18-180)||(40001785-40001946)
chr7 (18-177)||(25609907-25610066)
chr7 (70-177)||(8358449-8358558)
chr7 (70-180)||(12251542-12251655)
chr7 (63-179)||(25061702-25061821)
chr7 (70-179)||(46221858-46221969)
chr7 (70-169)||(18015736-18015837)
chr7 (70-179)||(42161277-42161389)
chr7 (70-177)||(38524984-38525094)
chr7 (70-120)||(11672442-11672493)
chr7 (81-180)||(33909863-33909965)
chr7 (70-120)||(33419273-33419322)
chr7 (70-120)||(4099826-4099877)
chr7 (82-173)||(26633172-26633263)
chr7 (138-180)||(2263933-2263975)
chr7 (81-121)||(32956449-32956489)
chr7 (70-177)||(6380240-6380349)
chr7 (70-179)||(36796526-36796636)
chr7 (83-179)||(27432390-27432489)
chr7 (125-173)||(41907994-41908042)
[»] chr1 (19 HSPs)
chr1 (18-179)||(12971219-12971381)
chr1 (70-180)||(20470524-20470637)
chr1 (70-178)||(17487440-17487551)
chr1 (70-177)||(48722527-48722637)
chr1 (70-180)||(14084855-14084968)
chr1 (70-180)||(33124787-33124900)
chr1 (63-171)||(27703676-27703787)
chr1 (70-179)||(51110256-51110369)
chr1 (86-179)||(6150503-6150599)
chr1 (70-120)||(12884292-12884343)
chr1 (70-179)||(52055347-52055460)
chr1 (81-185)||(10109509-10109616)
chr1 (70-108)||(30899526-30899564)
chr1 (70-180)||(18128092-18128207)
chr1 (70-120)||(50552352-50552404)
chr1 (71-153)||(1269382-1269468)
chr1 (70-121)||(29208253-29208303)
chr1 (30-63)||(28189327-28189360)
chr1 (77-117)||(28886140-28886180)
[»] chr2 (26 HSPs)
chr2 (18-180)||(15457314-15457475)
chr2 (18-177)||(18173029-18173187)
chr2 (18-180)||(17117726-17117888)
chr2 (18-179)||(18916143-18916304)
chr2 (18-180)||(38985798-38985949)
chr2 (70-178)||(36481204-36481315)
chr2 (70-180)||(6530456-6530568)
chr2 (70-180)||(13020218-13020331)
chr2 (70-183)||(18676466-18676582)
chr2 (128-180)||(21747902-21747954)
chr2 (70-180)||(26151903-26152014)
chr2 (70-177)||(42411712-42411822)
chr2 (70-120)||(12269285-12269335)
chr2 (70-180)||(25222119-25222232)
chr2 (70-180)||(4855786-4855899)
chr2 (70-185)||(42759903-42760020)
chr2 (70-179)||(41096693-41096806)
chr2 (70-177)||(19367574-19367683)
chr2 (72-177)||(45042187-45042295)
chr2 (63-121)||(9029471-9029531)
chr2 (70-179)||(45618774-45618886)
chr2 (18-81)||(21747319-21747382)
chr2 (63-165)||(32186297-32186400)
chr2 (70-177)||(7993433-7993542)
chr2 (69-121)||(31273318-31273370)
chr2 (84-173)||(2063612-2063702)
[»] chr6 (17 HSPs)
chr6 (18-179)||(31860815-31860978)
chr6 (18-188)||(1093129-1093299)
chr6 (18-179)||(1690722-1690884)
chr6 (18-180)||(29308556-29308718)
chr6 (70-180)||(6360558-6360670)
chr6 (70-180)||(31258612-31258726)
chr6 (70-180)||(24455016-24455129)
chr6 (104-179)||(5877017-5877091)
chr6 (72-178)||(29400939-29401047)
chr6 (70-166)||(57498-57597)
chr6 (98-183)||(12622144-12622231)
chr6 (70-180)||(3515005-3515119)
chr6 (70-180)||(6754003-6754116)
chr6 (84-182)||(19231407-19231507)
chr6 (70-120)||(2618214-2618265)
chr6 (63-160)||(350230-350333)
chr6 (28-63)||(2618285-2618320)
[»] scaffold0035 (1 HSPs)
scaffold0035 (70-180)||(22919-23032)
[»] scaffold0126 (1 HSPs)
scaffold0126 (74-180)||(16501-16610)
[»] scaffold0100 (1 HSPs)
scaffold0100 (81-173)||(46338-46433)
[»] scaffold0181 (1 HSPs)
scaffold0181 (82-183)||(18128-18232)


Alignment Details
Target: chr4 (Bit Score: 242; Significance: 1e-134; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 18 - 295
Target Start/End: Original strand, 45172733 - 45173010
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45172733 atgtccagattggagaactaaagtctagaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 45172832  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggctggacatggctgtatgtgtgaagttagatccatgttt 217  Q
    |||| |||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  45172833 ttttttgaggcacataacttttgtaggtccggcttgattgagcaccttgcactccctcaaggccggacctggctgtatgtgtgaagttagatccatgttt 45172932  T
Q  218 ggctaaagtagccaattgctttgctttccacaacaaacgagccaacccaagttatagtgcctcccctttggaaggatt 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45172933 ggctaaagtagccaattgctttgctttccacaacaaacgagccaacccaagttatagtgcctcccctttggaaggatt 45173010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 179
Target Start/End: Complemental strand, 34982199 - 34982038
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    |||||||||||  | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  34982199 atgtccagatagaaaaactaaagtctagaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtaggggtgggtattagatttaatt 34982100  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaagg 179  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  34982099 ttttctgaggcccatagcttttggaggcccggcttgattgagcacattgcactccctcaagg 34982038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 55134183 - 55134024
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||||    
T  55134183 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaatatatatattttttatttaagtgggggtgggtattagagtaaatt 55134084  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaa 177  Q
    |||||  || | ||||||||||| ||| |||||||| ||||||||||||||| |||||||    
T  55134083 ttttcgaagacacatagcttttgaaggcccggcttgtttgagcaccttgcaccccctcaa 55134024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 39372816 - 39372927
Alignment:
Q  70 taacatatatattttttatttaagtgg-gggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||  |   |||||| |||  |||||||||||||| || ||||||||||||    
T  39372816 taacatatatattttttatttaagtggcgggtggatattagatttaatttttcgttaaaggcccgtagaatttggaggtccggcctggttgagcaccttg 39372915  T
Q  167 cactccctcaag 178  Q
    ||| ||||||||    
T  39372916 cacaccctcaag 39372927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 70 - 169
Target Start/End: Original strand, 28463743 - 28463845
Alignment:
Q  70 taacatatatattttttatttaagt-gggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||  |  ||||||| |||| |||||||||||||| ||||||| |||||||    
T  28463743 taacatatatattttttatttaagtggggggtgggtattagatttaatttttcgttagaggcccgtagcatttggaggtccggcctgattgaacaccttg 28463842  T
Q  167 cac 169  Q
    |||    
T  28463843 cac 28463845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 21168966 - 21168853
Alignment:
Q  70 taacatatatattttttatttaagtg-ggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||||  |  ||||||| || | ||||||| |||||| || ||||||||||||    
T  21168966 taacatatatattttttatttaagtgtggggtgggcattagatttaatttttcgttagaggcccgtatcatttggagatccggcctggttgagcaccttg 21168867  T
Q  167 cactccctcaaggc 180  Q
    ||  ||||||||||    
T  21168866 cataccctcaaggc 21168853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 23256499 - 23256394
Alignment:
Q  74 atatatattttttatttaagtgggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactc 171  Q
    |||||| |||||| ||||||||||||||||||||| |||||||||||  |   || |||||| | ||||||||| |||| |||||||||||||||||| |    
T  23256499 atatattttttttgtttaagtgggggtggatattatatttaatttttcgttaaagacccataacatttggaggttcggcctgattgagcaccttgcacac 23256400  T
Q  172 cctcaa 177  Q
    ||||||    
T  23256399 cctcaa 23256394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 11681902 - 11682008
Alignment:
Q  74 atatatattttttatttaagt-gggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttgcact 170  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||  |  ||||| | |||| |||| ||| ||||| || |||||||||||||||     
T  11681902 atatatattttttatttaagtggggggtgggtattagatttaatttttcgttagaggctcgtagcatttgaaggcccggcctggttgagcaccttgcaca 11682001  T
Q  171 ccctcaa 177  Q
    |||||||    
T  11682002 ccctcaa 11682008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 11690181 - 11690287
Alignment:
Q  74 atatatattttttatttaagt-gggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttgcact 170  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||  |  ||||| | |||| |||| ||| ||||| || |||||||||||||||     
T  11690181 atatatattttttatttaagtggggggtgggtattagatttaatttttcgttagaggctcgtagcatttgaaggcccggcctggttgagcaccttgcaca 11690280  T
Q  171 ccctcaa 177  Q
    |||||||    
T  11690281 ccctcaa 11690287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 183
Target Start/End: Complemental strand, 53011618 - 53011509
Alignment:
Q  76 atatattttttatttaagtggggg-tggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttgcactcc 172  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||  |  ||||||| |||| |||||||| ||||  || ||||||||||||||| ||    
T  53011618 atatattttttatttaaatgggggatgggtattagatttaatttttcgttagaggcccgtagcatttggagg-ccggtctggttgagcaccttgcacacc 53011520  T
Q  173 ctcaaggctgg 183  Q
    |||||||||||    
T  53011519 ctcaaggctgg 53011509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 19661289 - 19661177
Alignment:
Q  70 taacatatatattttttatttaagtggggg-tggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    |||||||||||||||||||||||||||||| ||| ||||| |||||||||||  |  ||| |||||||| |||| ||| || || || ||||||||||||    
T  19661289 taacatatatattttttatttaagtgggggatgggtattaaatttaatttttcgttagagacccatagcatttgaagg-cccgcctggttgagcaccttg 19661191  T
Q  167 cactccctcaaggc 180  Q
    ||| ||||||||||    
T  19661190 cacaccctcaaggc 19661177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 32130944 - 32131057
Alignment:
Q  70 taacatatatattttttatttaagt-gggggtggatattagatttaattttttctgag--gcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||  ||||  || | |||| |||||||| || || || |||| ||||||     
T  32130944 taacatatatattttttatttaagtggggggtgggtattagatttaatttttcgtgagaagctcgtagcatttggaggcccagcctggttgaacacctta 32131043  T
Q  167 cactccctcaaggc 180  Q
    ||| ||||||||||    
T  32131044 cacaccctcaaggc 32131057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 51066738 - 51066851
Alignment:
Q  67 aagtaacatatatattttttatttaagtgggg-gtggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcacc 163  Q
    ||||||||||||| | |||||||||| ||||| |||||||||||| |||||||||| |  ||||||| || | ||| |||||||||| || | ||| |||    
T  51066738 aagtaacatatatttcttttatttaaatggggagtggatattagacttaattttttgtttgaggcccgtaacatttagaggtccggcctggtagagaacc 51066837  T
Q  164 ttgcactccctcaa 177  Q
    ||||||||||||||    
T  51066838 ttgcactccctcaa 51066851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 21791711 - 21791816
Alignment:
Q  74 atatatatttttta-tttaagtgggggtggatattagatttaattttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactcc 172  Q
    |||||||||||||| ||||||||||||||| ||||||| | |  ||||| | |||||||||| |||| ||| || ||||||||||| ||| |||||||||    
T  21791711 atatatattttttaatttaagtgggggtgggtattagactgacctttttttaaggcccatagtttttagagatctggcttgattgaacacattgcactcc 21791810  T
Q  173 ctcaag 178  Q
    | ||||    
T  21791811 cccaag 21791816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 29579757 - 29579654
Alignment:
Q  70 taacatatatattttttatttaagtgggggtggat-attagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    |||||||||| |||||||||||||||||||  ||  |||||| |||||||||| |  ||| ||| |||| |||||||||||||| ||||||||||| |||    
T  29579757 taacatatattttttttatttaagtggggggtgagcattagacttaattttttgtttgagacccgtagcatttggaggtccggcctgattgagcactttg 29579658  T
Q  167 cact 170  Q
    ||||    
T  29579657 cact 29579654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 27632303 - 27632199
Alignment:
Q  76 atatattttttatttaagtggggg-tggatattagatttaattttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccct 174  Q
    |||| ||||||||||||  ||||| ||| ||||||  ||||| |||| | |||||| |||| |||||||| ||||| |  ||||||||||||||||||||    
T  27632303 atattttttttatttaacagggggatgggtattagtcttaatatttttttaggcccgtagcatttggaggcccggcctagttgagcaccttgcactccct 27632204  T
Q  175 caagg 179  Q
    |||||    
T  27632203 caagg 27632199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 10575730 - 10575803
Alignment:
Q  96 ggggtggatattagatttaattttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcact 170  Q
    |||||| |||||||| |||||||||| | ||  |||||  |||||||||||||||||| ||||||||||||||||    
T  10575730 ggggtgaatattagaattaatttttttt-agatccataagttttggaggtccggcttggttgagcaccttgcact 10575803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 180
Target Start/End: Original strand, 29221782 - 29221891
Alignment:
Q  74 atatatattttttatttaagt-gggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttgcact 170  Q
    |||||| |||||||||||||| |||||||| ||||| | |||||||||  | |||||||||| || |||||||| || |   | ||||||||||||||||    
T  29221782 atatattttttttatttaagtggggggtgggtattaaacttaattttttgtttgaggcccatggcatttggaggcccagtccggttgagcaccttgcact 29221881  T
Q  171 ccctcaaggc 180  Q
    ||| ||||||    
T  29221882 cccacaaggc 29221891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 44477947 - 44477897
Alignment:
Q  70 taacatatatattttttatttaagtg-ggggtggatattagatttaatttt 119  Q
    ||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  44477947 taacatatatattttttatttaaatgaggggtggatattagatttattttt 44477897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 180
Target Start/End: Complemental strand, 41038146 - 41038045
Alignment:
Q  81 ttttttatttaagtggggg-tggatattagatttaattttttctgag-gcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaag 178  Q
    |||||||||||| |||||| |||||||||||||||||||||  | || | || || | |||||||| ||||| || ||||||| ||||||| ||||||||    
T  41038146 ttttttatttaaatggggggtggatattagatttaatttttcgttagagaccgtatcatttggaggcccggcctggttgagcatcttgcacaccctcaag 41038047  T
Q  179 gc 180  Q
    ||    
T  41038046 gc 41038045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 16072310 - 16072270
Alignment:
Q  81 ttttttatttaagtgggggtggatattagatttaatttttt 121  Q
    ||||||||||| |||||||||| ||||||| ||||||||||    
T  16072310 ttttttatttatgtgggggtgggtattagacttaatttttt 16072270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 34524040 - 34524202
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34524040 atgtccagataggagaactaaagtctagaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtgggtattagatttaatt 34524139  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggc 180  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34524140 ttttctgaggcccgtagcttttggaggtccggcttgattgagcaccttgcactccctcaaggc 34524202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 39698033 - 39698188
Alignment:
Q  24 agataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaattttttct 123  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| | |||| |||||||    
T  39698033 agataggagaactaaagtctagaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtggaggtgggtattaaagttaa-tttttct 39698131  T
Q  124 gaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggc 180  Q
    ||| |||||| |||||||||||||  ||| ||||| ||||||||| |||||||||||    
T  39698132 gagacccataacttttggaggtccaacttaattgaacaccttgcattccctcaaggc 39698188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 12531527 - 12531410
Alignment:
Q  25 gataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaattttttctg 124  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||| || | ||||||||    
T  12531527 gataggagaactaaagtctagaaaaaactcaaacgtgtaaagaagtaacatatctattttttatttaagt-ggggtgggtattagagttga-tttttctg 12531430  T
Q  125 aggcccatagcttttggagg 144  Q
    ||| ||||||||||||||||    
T  12531429 aggtccatagcttttggagg 12531410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 23567363 - 23567480
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    |||| |||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||||| || |||| ||| ||| ||||||    
T  23567363 atgttcagataagagaactaaagtctagaaaaacctcaaacgtgtaaaaaagtaccatatatattttttatttaagt-ggagtgggtatcagagttaatt 23567461  T
Q  118 ttttctgaggcccatagctt 137  Q
    |||| | |||||||||||||    
T  23567462 tttt-ttaggcccatagctt 23567480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 32098325 - 32098438
Alignment:
Q  63 aaagaagtaacatatatattttttatttaagtggggg-tggatattagatttaatttttt--ctgaggcccatagcttttggaggtccggcttgattgag 159  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||  || ||||| | || ||||||||| |||||||| |||||    
T  32098325 aaagaagtaacatatatattttttaattaagtggggggtgggtattagacttaattttttttctcaggcctagagtttttggaggaccggcttggttgag 32098424  T
Q  160 caccttgcactccc 173  Q
    ||||||||||||||    
T  32098425 caccttgcactccc 32098438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 43926478 - 43926591
Alignment:
Q  70 taacatatatattttttatttaagtggg-ggtggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    |||||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||  ||||||| | || |||||||  ||| | |||||||||||||||    
T  43926478 taacatatatattttttatttaagtgggaggtgggtattaaatttaatttttccttagaggcccgtggcatttggagacccgacctgattgagcaccttg 43926577  T
Q  167 cactccctcaaggc 180  Q
    ||| ||||||||||    
T  43926578 cacaccctcaaggc 43926591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 41666088 - 41666196
Alignment:
Q  66 gaagtaacatatatattttttatttaagtgggggtggatattagatttaattttttctgaggcccatagcttttggaggtccggcttgattgagcacctt 165  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||| | |||| |||| |||||| |||| || |||  |||||||||||    
T  41666088 gaagtaacatatatattttttatttaagtggggttgg-tattagacttaatttttt-ttaggcacataacttttgaaggttcgactt--ttgagcacctt 41666183  T
Q  166 gcactccctcaag 178  Q
    |||||||| ||||    
T  41666184 gcactcccccaag 41666196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 44665202 - 44665308
Alignment:
Q  76 atatattttttatttaagtg-ggggtggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttgcactcc 172  Q
    |||||||||||||||||||| ||||||| |||||||||||||| |   |  ||||||| |||| |||||||| |||||||||||||||||||| ||| ||    
T  44665202 atatattttttatttaagtgaggggtgggtattagatttaattatgcgttagaggcccgtagcatttggaggcccggcttgattgagcaccttacacacc 44665301  T
Q  173 ctcaagg 179  Q
    |||||||    
T  44665302 ctcaagg 44665308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 187
Target Start/End: Complemental strand, 7857994 - 7857876
Alignment:
Q  70 taacatatatattttttatttaagtgggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttgc 167  Q
    ||||||||||||||||||||||||| ||||||| ||||| |||||||||||  |  || |||| ||||  ||||||| ||| | || |||||||||||||    
T  7857994 taacatatatattttttatttaagt-ggggtgggtattaaatttaatttttcgttagaagcccgtagcaattggaggcccgacctggttgagcaccttgc 7857896  T
Q  168 actccctcaaggctggacat 187  Q
    || |||||||||| ||||||    
T  7857895 acaccctcaaggccggacat 7857876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 3445591 - 3445544
Alignment:
Q  70 taacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3445591 taacatatatattttttatttaagtgggggtgggtattagatttaatt 3445544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 77 - 180
Target Start/End: Complemental strand, 18111717 - 18111611
Alignment:
Q  77 tatattttttatttaagtgg-gggtggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttgcactccc 173  Q
    |||||||||||||||||| | |||||| | |||||||||||||||     ||| |||||||| |||||||||||| | |||||||||||||||||| |||    
T  18111717 tatattttttatttaagttgagggtgggtgttagatttaatttttcgatagagacccatagcatttggaggtccgacctgattgagcaccttgcacaccc 18111618  T
Q  174 tcaaggc 180  Q
    |||||||    
T  18111617 tcaaggc 18111611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 180
Target Start/End: Complemental strand, 3471492 - 3471390
Alignment:
Q  81 ttttttatttaagtggggg-tggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaa 177  Q
    ||||||||||||||||||| ||| ||||| | |||||||||| |  ||||||| |||| |||||||||||| | || ||||||| ||||||||||| |||    
T  3471492 ttttttatttaagtggggggtgggtattacacttaattttttgtttgaggcccgtagcatttggaggtccgacctggttgagcatcttgcactcccccaa 3471393  T
Q  178 ggc 180  Q
    |||    
T  3471392 ggc 3471390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 18420770 - 18420817
Alignment:
Q  74 atatatattttttatttaagtgg-gggtggatattagatttaattttt 120  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||    
T  18420770 atatatattttttatttaagtggagggtgggtattagatttaattttt 18420817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 180
Target Start/End: Original strand, 42951940 - 42952042
Alignment:
Q  81 ttttttatttaagtggggg-tggatattagatttaatttttt-ct-gaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaa 177  Q
    ||||||||||||||||||| ||| |||||||||||||||||  || || ||||||||| ||| || |||||   |||| ||||||||||||| |||||||    
T  42951940 ttttttatttaagtggggggtgggtattagatttaatttttcgctagaagcccatagcatttagaagtccgaactgatcgagcaccttgcacaccctcaa 42952039  T
Q  178 ggc 180  Q
    |||    
T  42952040 ggc 42952042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 13585204 - 13585098
Alignment:
Q  76 atatattttttatttaagtggggg-tggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactcc 172  Q
    |||||||||||| |||| |||||| ||| |||||||||||||||||  |  ||||||| | || |||| ||| ||||  |||||||||||||||||| ||    
T  13585204 atatattttttagttaaatggggggtgggtattagatttaatttttcgttagaggcccgttgcatttgaaggcccggtctgattgagcaccttgcacacc 13585105  T
Q  173 ctcaagg 179  Q
    || ||||    
T  13585104 cttaagg 13585098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Complemental strand, 1003998 - 1003969
Alignment:
Q  70 taacatatatattttttatttaagtggggg 99  Q
    ||||||||||||||||||||||||||||||    
T  1003998 taacatatatattttttatttaagtggggg 1003969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 121
Target Start/End: Complemental strand, 42777657 - 42777609
Alignment:
Q  74 atatatattttttatttaagtgggg-gtggatattagatttaatttttt 121  Q
    |||||| |||||||||||||| ||| |||||||||||| ||||||||||    
T  42777657 atatatcttttttatttaagtagggtgtggatattagacttaatttttt 42777609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 147; Significance: 2e-77; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 43511593 - 43511431
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  43511593 atgtccagataggagaactaaagtctagaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtggaggtgggtattagatttaatt 43511494  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggc 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43511493 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggc 43511431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 4734671 - 4734832
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    ||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  4734671 atgtccagataggagaactaaagtctagaaaaaactcaaacatgtaaagaagtaacatatatattttttatttaagt-ggggtgggtattagagttaatt 4734769  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggc 180  Q
    |||| |||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||    
T  4734770 ttttatgaggcccatagcttttggaggcccggcttgattgagcattttgcactccctcaaggc 4734832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 20975960 - 20975800
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaa--ctcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaa 115  Q
    ||||| ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||    
T  20975960 atgtcaagataagagaactaaagtctagaaaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtggaggtgggtattagagttaa 20975861  T
Q  116 ttttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaa 177  Q
     |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20975860 -tttttctgaggcccatagcttttggaggcccggcttgattgagcaccttgcactccctcaa 20975800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 42291970 - 42292133
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    ||||||||||| |||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||    
T  42291970 atgtccagataggagaactaaagtttagaaaaaagtcaaacgtgtaaagaagtaacatatatattttttatttaagtgggcgtgagtattagagttaatt 42292069  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggctg 182  Q
    |||||||||||| |||||||||||||| ||||| | |||||||||||||||||||||||||||||    
T  42292070 ttttctgaggcctatagcttttggaggcccggc-taattgagcaccttgcactccctcaaggctg 42292133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 178
Target Start/End: Complemental strand, 29156165 - 29156004
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatatttttt-atttaagtgggggtggatattagatttaat 116  Q
    |||| |||||| || ||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| | | ||||| |||||||||||||    
T  29156165 atgttcagataggataactatagtctagaaaaaactcaaacgtgtaaagaagtaacatatatatttttttatttaaatagaggtgggtattagatttaat 29156066  T
Q  117 tttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaag 178  Q
    ||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||||    
T  29156065 tttttctgaggtccataacttttggaggtccggtttgattgagcatcttgcactccctcaag 29156004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 3349817 - 3349975
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| | ||||| ||||| | ||||||    
T  3349817 atgtccagataggagaactaaagtctagaaaaaactcaaacgtgtaaagaagtaacatatgtattttttatttaagt-gaggtgggtattacaattaatt 3349915  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaa 177  Q
    || || ||||||||||| ||||||||| | | |||||||||||| |||||||||||||||    
T  3349916 ttatcggaggcccatagattttggaggcctgacttgattgagcatcttgcactccctcaa 3349975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 10591362 - 10591521
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    |||| |||||| ||||||||||||||| |||||||||||||||||||| ||  |||||||||  ||||||||||| ||||||||| ||||||| || |||    
T  10591362 atgttcagataggagaactaaagtctagaaaaaactcaaacgtgtaaaaaaagaacatatat--tttttatttaaatgggggtgggtattagagttgatt 10591459  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggc 180  Q
    ||| || | |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10591460 ttt-ctaaagcccatagcttttggaggcccggcttgattgagcaccttgcactccctcaaggc 10591521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 17514028 - 17514154
Alignment:
Q  21 tccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacat-----------atatattttttatttaagtgggggtggatattag 109  Q
    |||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||           ||||||||||||||||||||||||||| ||||||    
T  17514028 tccagataggagaactaaagtctagaaaaacctcaaacgtgtaaagaagtaacattttttttttatatatattttttatttaagtgggggtgggtattag 17514127  T
Q  110 atttaattttttctgaggcccatagct 136  Q
    |||||||||||| | ||||||||||||    
T  17514128 atttaatttttttttaggcccatagct 17514154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 5829360 - 5829213
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    ||||| ||||| ||||||||||||||| |||||||||||||||||||        |||| ||||||||||||||| ||||||||| |||||   ||||||    
T  5829360 atgtcaagataggagaactaaagtctataaaaaactcaaacgtgtaa--------catacatattttttatttaaatgggggtgggtattaaggttaatt 5829269  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccc 173  Q
    ||||||||| ||||||  |||| |||||| | ||| ||||||||||||||||||||    
T  5829268 ttttctgagacccataatttttagaggtctgacttaattgagcaccttgcactccc 5829213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 8398884 - 8398778
Alignment:
Q  74 atatatattttttatttaagtg-ggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttgcact 170  Q
    |||||||||||||||||||||| ||||||  |||||||||||||||||  |  | ||||| |||| |||||||||||||| ||||||||||||||||||     
T  8398884 atatatattttttatttaagtggggggtgagtattagatttaatttttcgttaggggcccgtagcatttggaggtccggcctgattgagcaccttgcaca 8398785  T
Q  171 ccctcaa 177  Q
    |||||||    
T  8398784 ccctcaa 8398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 12661213 - 12661102
Alignment:
Q  70 taacatatatattttttatttaagtgg-gggtggatattagatttaatttttt--ctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||   ||||| || |||| |||||||| |||   || ||||||||||||    
T  12661213 taacatatatattttttatttaagtggagggtagatattagatttaattttttgattgaggtccgtagcatttggaggcccgatctggttgagcaccttg 12661114  T
Q  167 cactccctcaag 178  Q
    ||| ||||||||    
T  12661113 cacaccctcaag 12661102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 13423770 - 13423657
Alignment:
Q  70 taacatatatattttttatttaagtggg-ggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    |||||||||||||||||||||||||||| | | | |||||||||||||||||  |  ||||||| || | |||||||| || || || ||||||||||||    
T  13423770 taacatatatattttttatttaagtgggagataggtattagatttaatttttcgttagaggcccgtaacatttggaggccccgcctggttgagcaccttg 13423671  T
Q  167 cactccctcaaggc 180  Q
    ||| ||||||||||    
T  13423670 cacaccctcaaggc 13423657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 13656117 - 13656067
Alignment:
Q  70 taacatatatattttttatttaagtgggggtggatattagatttaattttt 120  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  13656117 taacatatatattttttatttaagtggaggtggttattagatttaattttt 13656067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 179
Target Start/End: Complemental strand, 40956206 - 40956107
Alignment:
Q  81 ttttttatttaagtgggg-gtggatattagatttaattttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaagg 179  Q
    ||||| |||||||||||| |||| ||||||| |||||||||| | ||| ||||||||||||||||||| | ||| ||||||  ||||||| ||| |||||    
T  40956206 tttttaatttaagtggggtgtgggtattagacttaatttttttttagggccatagcttttggaggtccagtttggttgagctacttgcacacccccaagg 40956107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 183
Target Start/End: Complemental strand, 931273 - 931169
Alignment:
Q  81 ttttttatttaagtgggggtggatattagatttaatt--ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaag 178  Q
    ||||||||| |||||||||||| ||||||| ||||||  |||| |||     || ||||||||||||| |||||| |||| ||||||| |||||||||||    
T  931273 ttttttattaaagtgggggtgggtattagacttaattatttttttgaaagttattgcttttggaggtctggcttggttgaacaccttgtactccctcaag 931174  T
Q  179 gctgg 183  Q
    |||||    
T  931173 gctgg 931169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 26311915 - 26311864
Alignment:
Q  70 taacatatatattttttatttaag-tgggggtggatattagatttaattttt 120  Q
    |||||||||||||||||||||||| ||||||| | |||||||||||||||||    
T  26311915 taacatatatattttttatttaagttgggggtaggtattagatttaattttt 26311864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 179
Target Start/End: Original strand, 19099481 - 19099582
Alignment:
Q  81 ttttttatttaagtggggg-tggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaa 177  Q
    |||||||||||| |||||| ||| ||||||| |||||||||| |  ||||||| |||  |||||||| ||| | || ||||||||||||||||||| |||    
T  19099481 ttttttatttaaatggggggtgggtattagacttaattttttgtttgaggcccgtagtatttggaggcccgacctggttgagcaccttgcactcccacaa 19099580  T
Q  178 gg 179  Q
    ||    
T  19099581 gg 19099582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 26377930 - 26378042
Alignment:
Q  70 taacatatatattttttatttaagt--gggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcacctt 165  Q
    |||||||||||||||||||||||||  |||||||  |||||||||||||||||  |  ||| ||| |||  |||| ||| ||| | || |||||||||||    
T  26377930 taacatatatattttttatttaagtgggggggtgattattagatttaatttttcgttagagacccgtagaatttgaaggcccgacctggttgagcacctt 26378029  T
Q  166 gcactccctcaag 178  Q
    |||| ||||||||    
T  26378030 gcacaccctcaag 26378042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 13288534 - 13288442
Alignment:
Q  71 aacatatatattttttatttaagtgggggtggatattag---atttaattttttctgaggcccatagcttttggaggtccggcttgattgagc 160  Q
    ||||||||| | |||||||| | ||||||| ||||||||   ||  ||||| || |||||||||||  |||||||||||||||||| ||||||    
T  13288534 aacatatatttattttatttgaatgggggtagatattagtctataaaatttattttgaggcccatatattttggaggtccggcttggttgagc 13288442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 98
Target Start/End: Original strand, 36718723 - 36718751
Alignment:
Q  70 taacatatatattttttatttaagtgggg 98  Q
    |||||||||||||||||||||||||||||    
T  36718723 taacatatatattttttatttaagtgggg 36718751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 9e-70; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 48627118 - 48627279
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  48627118 atgtccagatatgagaactaaagtctagaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtgggtattagagttaatt 48627217  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaagg 179  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  48627218 ttttatgaggcccatagcttttggaggcccggcttgattgagcaccttgcaccccctcaagg 48627279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 18 - 178
Target Start/End: Original strand, 43905932 - 43906076
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||||||             |||||||||||||||||||||| |||||| |||| ||||||    
T  43905932 atgtccagataggagaactaaagtctaaaaaaacctcaaacgtgta-------------tatattttttatttaagtgggg-tggataatagagttaatt 43906017  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaag 178  Q
    ||||   | || ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  43906018 ttttt--aagctcatagcttttggaggtccgacttgattgagcaccttgcactccctcaag 43906076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 8364081 - 8363968
Alignment:
Q  70 taacatatatattttttatttaagtg-ggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||  |  ||||||| ||||  ||||||| ||||| || ||||||||||||    
T  8364081 taacatatatattttttatttaagtggggggtggatattagatttaatttttcgttagaggcccgtagcaattggaggcccggcctggttgagcaccttg 8363982  T
Q  167 cactccctcaaggc 180  Q
    ||| ||||||||||    
T  8363981 cacaccctcaaggc 8363968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 179
Target Start/End: Original strand, 51939710 - 51939822
Alignment:
Q  70 taacatatatattttttatttaagt-gggggtggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||| |  |||||||||||  |||||||| || || || ||||||||||||    
T  51939710 taacatatatattttttatttaagtggggggtgggtattagatttaattttttgttagaggcccatagaatttggaggccccgcctggttgagcaccttg 51939809  T
Q  167 cactccctcaagg 179  Q
    ||| |||||||||    
T  51939810 cacaccctcaagg 51939822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 70 - 183
Target Start/End: Original strand, 41707210 - 41707326
Alignment:
Q  70 taacatatatattttttatttaagtggggg-tggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    |||||||||||||||||||||||||||||| ||| ||||| |||||||||||  |  ||||||| |||| |||||||| ||||| || |||| |||||||    
T  41707210 taacatatatattttttatttaagtggggggtgggtattaaatttaatttttcgttagaggcccgtagcatttggaggcccggcctggttgaacaccttg 41707309  T
Q  167 cactccctcaaggctgg 183  Q
    ||| |||||||||||||    
T  41707310 cacaccctcaaggctgg 41707326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 27110962 - 27111074
Alignment:
Q  70 taacatatatattttttatttaagt-gggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||  |  ||||||| |||| |||||||| || || || |||||||||||     
T  27110962 taacatatatattttttatttaagtagggggtgggtattagatttaatttttcgttagaggcccgtagcatttggaggccccgcctggttgagcacctt- 27111060  T
Q  167 cactccctcaaggc 180  Q
    ||| ||||||||||    
T  27111061 cacaccctcaaggc 27111074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 29387909 - 29388022
Alignment:
Q  70 taacatatatattttttatttaagt-gggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||  |  || || | |||| |||| ||||||||| || ||||||||||||    
T  29387909 taacatatatattttttatttaagtggggggtgggtattagatttaatttttcgttagaagctcgtagcatttgaaggtccggcctggttgagcaccttg 29388008  T
Q  167 cactccctcaaggc 180  Q
    ||| | ||||||||    
T  29388009 cacacactcaaggc 29388022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 46791852 - 46791965
Alignment:
Q  70 taacatatatattttttatttaagt-gggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||  |  |||| || |||| |||||||| ||| |||  || |||||||||    
T  46791852 taacatatatattttttatttaagtggggggtgggtattagatttaatttttcgttagaggtccgtagcatttggaggcccgacttagttaagcaccttg 46791951  T
Q  167 cactccctcaaggc 180  Q
    ||| ||||||||||    
T  46791952 cacaccctcaaggc 46791965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 23067881 - 23067993
Alignment:
Q  70 taacatatatattttttatttaagtgggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttgc 167  Q
    |||||||||||| |||||||||| ||||||||| ||||| |||||||||||  |  |||| || ||||  ||||||| ||||| || |||||||||||||    
T  23067881 taacatatatatattttatttaaatgggggtgggtattaaatttaatttttcgttagaggtccgtagcaattggaggcccggcctggttgagcaccttgc 23067980  T
Q  168 actccctcaaggc 180  Q
    || ||||||||||    
T  23067981 acaccctcaaggc 23067993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 21784938 - 21785048
Alignment:
Q  70 taacatatatatttt-ttatttaagtgggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||  |  ||| ||| |||| || ||||| ||||| || || |||||||||    
T  21784938 taacatatatatttttttatttaagtgggggtgaatattagatttaatttttcgttagagacccgtagcattgggaggcccggcctggttaagcaccttg 21785037  T
Q  167 cactccctcaa 177  Q
    ||| |||||||    
T  21785038 cacaccctcaa 21785048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 179
Target Start/End: Original strand, 52655280 - 52655390
Alignment:
Q  70 taacatatatattttttatttaagt-gggggtggatattagatttaattttt-tctgaggcccatagcttttggaggtccggcttgattgagcaccttgc 167  Q
    |||||||||||||||||||||| || ||||||||  |||||||||||||||| |  |||||||||| | ||| |||| ||||| || || ||||||||||    
T  52655280 taacatatatattttttatttatgtagggggtggggattagatttaatttttgttagaggcccataacattt-gaggcccggcctggttaagcaccttgc 52655378  T
Q  168 actccctcaagg 179  Q
    || |||||||||    
T  52655379 acaccctcaagg 52655390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 6715360 - 6715247
Alignment:
Q  70 taacatatatattttttatttaagtgg-gggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||||||||| ||| |||||| ||||| |||||||||||  |  ||||||| || | ||| ||||  |||| || ||||||||||||    
T  6715360 taacatatatattttttatttaaatggagggtgggtattaaatttaatttttcgttagaggcccgtaacatttagaggctcggcctggttgagcaccttg 6715261  T
Q  167 cactccctcaaggc 180  Q
    ||| ||||||||||    
T  6715260 cacaccctcaaggc 6715247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 23164726 - 23164838
Alignment:
Q  70 taacatatatattttttatttaagtg-ggggtggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    |||||||||| ||||||||||||||| ||||||| |||||||  ||||||||| |  ||||||||| || |||||||| ||| | || |||| |||||||    
T  23164726 taacatatat-ttttttatttaagtgaggggtgggtattagacataattttttgtttgaggcccatggcatttggaggcccgacctggttgaacaccttg 23164824  T
Q  167 cactccctcaaggc 180  Q
    ||||||| ||||||    
T  23164825 cactcccccaaggc 23164838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 179
Target Start/End: Complemental strand, 24252528 - 24252416
Alignment:
Q  70 taacatatatattttttatttaagt-gggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    |||||||||||||||||| |||||| |||||||| |||||||| ||||||||  |  ||||||| || | |||||||| ||||  || |||||||||||     
T  24252528 taacatatatattttttacttaagtcgggggtgggtattagatctaatttttagttagaggcccgtaacatttggaggcccggtctggttgagcacctta 24252429  T
Q  167 cactccctcaagg 179  Q
    ||| |||||||||    
T  24252428 cacaccctcaagg 24252416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 183
Target Start/End: Original strand, 27729924 - 27730038
Alignment:
Q  70 taacatatatattttttatttaagtgggggtggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttgc 167  Q
    |||||||||||||||||||||||||||||   | ||||| |||||||||||  |  ||||||| || | |||||||||||| | |||||||||| |||||    
T  27729924 taacatatatattttttatttaagtggggtacg-tattatatttaatttttcgttagaggcccgtaccatttggaggtccgacctgattgagcatcttgc 27730022  T
Q  168 actccctcaaggctgg 183  Q
    || | ||||| |||||    
T  27730023 acactctcaaagctgg 27730038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 51064408 - 51064299
Alignment:
Q  70 taacatatatattttttatttaagtgggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttgc 167  Q
    ||||||||||||||||||||||||| ||  ||| |||||||||||||||||  |  |||| || |||  |||||| | ||||| ||||||| ||||||||    
T  51064408 taacatatatattttttatttaagt-ggaatgggtattagatttaatttttcgttagaggtccgtagtatttggaagcccggcctgattgaacaccttgc 51064310  T
Q  168 actccctcaag 178  Q
    || ||||||||    
T  51064309 acaccctcaag 51064299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 18408101 - 18408050
Alignment:
Q  70 taacatatatattttttatttaagtgg-gggtggatattagatttaattttt 120  Q
    |||||||||||||||||||||||||||  ||||| ||||| |||||||||||    
T  18408101 taacatatatattttttatttaagtggaaggtgggtattatatttaattttt 18408050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 29843864 - 29843926
Alignment:
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggc 180  Q
    |||| ||||||||||| |||||||||| || ||||||||||||   |||||||||| ||||||    
T  29843864 ttttttgaggcccataccttttggaggaccagcttgattgagctgtttgcactcccccaaggc 29843926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 18408154 - 18408121
Alignment:
Q  30 gagaactaaagtctacaaaaaactcaaacgtgta 63  Q
    ||||||||||||||| ||||||||||||||||||    
T  18408154 gagaactaaagtctagaaaaaactcaaacgtgta 18408121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 6e-68; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 26282631 - 26282793
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    |||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  26282631 atgtgcagataggagaactaaagtctagaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtgggtattagagttaatt 26282730  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggc 180  Q
    |||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  26282731 ttttctgaggcctatagcttttggaggcccggcttgattgagtaccttgcactccctcaaggc 26282793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 1365984 - 1365822
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttt-tatttaagtgggggtggatattagatttaat 116  Q
    ||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||| |||||    
T  1365984 atgtccagataggagaactaaagtctagaagaaactcaaacgtgtaaagaagtaacatatatatttttatatttaagtgggg-tgggtattagagttaat 1365886  T
Q  117 tttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggc 180  Q
    |||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  1365885 tttttcggaggcccatagattttggaggcccggcttgattgagcaccttgcactccctcaaggc 1365822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 40001785 - 40001946
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    |||| ||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  40001785 atgttcagatagaagaactaaagtctagaaaaacctcaaacgtgtaaagaagtaacatatatattttttatttaagtaggggtgggtattagagttaatt 40001884  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggc 180  Q
    |||| | |||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||    
T  40001885 tttt-ttaggcccatagcttttggaggcccggcttaattgagcaccttgcactctctcaaggc 40001946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 25610066 - 25609907
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    |||| |||||| ||||||||||||||| ||||||| |||| |||||||||||||||||| ||||||||||||||| ||| ||||| ||||||| ||||||    
T  25610066 atgttcagataggagaactaaagtctagaaaaaacccaaatgtgtaaagaagtaacatacatattttttatttaaatggaggtgggtattagagttaatt 25609967  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaa 177  Q
    ||||||| | | |||| ||||| |||   || ||||||||||||||||||||||||||||    
T  25609966 ttttctgtgactcataacttttagagactcgacttgattgagcaccttgcactccctcaa 25609907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 8358449 - 8358558
Alignment:
Q  70 taacatatatattttttatttaagtgggggtggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttgc 167  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |  ||||||| |||| |||||||| ||||| ||  ||||||||||||    
T  8358449 taacatatatattttttatttaagtgagggtggatattagatttaattttttgttagaggcccgtagcatttggaggcccggcctggatgagcaccttgc 8358548  T
Q  168 actccctcaa 177  Q
    || |||||||    
T  8358549 acaccctcaa 8358558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 12251542 - 12251655
Alignment:
Q  70 taacatatatattttttatttaagtgg-gggtggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||    ||||| | |||| |||||||||||||| |||||||| ||||||    
T  12251542 taacatatatattttttatttaagtggagggtgggtattagatttaattttttgatagaggctcgtagcatttggaggtccggcctgattgagtaccttg 12251641  T
Q  167 cactccctcaaggc 180  Q
    ||| ||||||||||    
T  12251642 cacaccctcaaggc 12251655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 179
Target Start/End: Complemental strand, 25061821 - 25061702
Alignment:
Q  63 aaagaagtaacatatatatttttt-atttaagt-gggggtggatattagatttaattttttctg-aggcccatagcttttggaggtccggcttgattgag 159  Q
    ||||||||||||||| | |||||| |||||||| |||||||||||||||| |||||||||| |  |||||||||   ||||||||||||||||| |||||    
T  25061821 aaagaagtaacatatttttttttttatttaagtagggggtggatattagacttaattttttttttaggcccataatatttggaggtccggcttggttgag 25061722  T
Q  160 caccttgcactccctcaagg 179  Q
    |||||||||||||| |||||    
T  25061721 caccttgcactcccccaagg 25061702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 179
Target Start/End: Original strand, 46221858 - 46221969
Alignment:
Q  70 taacatatatattttttatttaagtgggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttgc 167  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||  |  |||| || |||| |||||||| ||||| |  |||||||||||||    
T  46221858 taacatatatattttttatttaagtaggggtgggtattagatttaatttttcgttagaggtccgtagcatttggaggcccggcctagttgagcaccttgc 46221957  T
Q  168 actccctcaagg 179  Q
    || |||||||||    
T  46221958 acaccctcaagg 46221969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 169
Target Start/End: Original strand, 18015736 - 18015837
Alignment:
Q  70 taacatatatattttttatttaagtgggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttgc 167  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||  |  ||||||| || | |||||||| ||||| || ||||||| |||||    
T  18015736 taacatatatattttttatttaagtgggggtgggtattagatttaatttttcgttagaggcccgtaacatttggaggcccggcctggttgagcatcttgc 18015835  T
Q  168 ac 169  Q
    ||    
T  18015836 ac 18015837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 179
Target Start/End: Original strand, 42161277 - 42161389
Alignment:
Q  70 taacatatatattttttatttaagt-gggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||||||||  |  ||||||| |||| ||||||||  |||| || ||||||||||||    
T  42161277 taacatatatattttttatttaagtggggggaggatattaaatttaatttttcgttagaggcccgtagcatttggaggctcggcctggttgagcaccttg 42161376  T
Q  167 cactccctcaagg 179  Q
    ||| |||||||||    
T  42161377 cacaccctcaagg 42161389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 177
Target Start/End: Complemental strand, 38525094 - 38524984
Alignment:
Q  70 taacatatatattttttatttaagtgg-gggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||||||||||||| | |||| |||||||||||||||||  |  |||| || |||| |||||||| ||||| || ||||||||||||    
T  38525094 taacatatatattttttatttaagtggagagtgggtattagatttaatttttcgttagaggtccgtagcatttggaggcccggcctggttgagcaccttg 38524995  T
Q  167 cactccctcaa 177  Q
    ||| |||||||    
T  38524994 cacaccctcaa 38524984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 11672493 - 11672442
Alignment:
Q  70 taacatatatattttttatttaagtg-ggggtggatattagatttaattttt 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11672493 taacatatatattttttatttaagtggggggtggatattagatttaattttt 11672442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 180
Target Start/End: Complemental strand, 33909965 - 33909863
Alignment:
Q  81 ttttttatttaagtg-ggggtggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaa 177  Q
    ||||||||||||||| ||||||| ||||||| |||||||||| |  ||||||| |||| |||||||| ||||| || ||||||||||||||| ||| |||    
T  33909965 ttttttatttaagtgaggggtgggtattagacttaattttttgtttgaggcccgtagcatttggaggcccggcctggttgagcaccttgcacacccccaa 33909866  T
Q  178 ggc 180  Q
    |||    
T  33909865 ggc 33909863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 33419273 - 33419322
Alignment:
Q  70 taacatatatattttttatttaagtgggggtggatattagatttaattttt 120  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  33419273 taacatatatattttttatttaagt-ggggtggttattagatttaattttt 33419322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 4099877 - 4099826
Alignment:
Q  70 taacatatatattttttatttaagtggg-ggtggatattagatttaattttt 120  Q
    |||||||||||||||||||||||||||| ||||| ||||| |||||||||||    
T  4099877 taacatatatattttttatttaagtgggaggtgggtattaaatttaattttt 4099826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 26633263 - 26633172
Alignment:
Q  82 tttttatttaagtgggggtggatattagatttaattttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccc 173  Q
    ||||| ||||||| ||||||| ||||| | ||||||| || | ||||||| || |||| ||||||||||||  |||||| ||||||||||||    
T  26633263 tttttctttaagttggggtgggtattatacttaatttgtttttaggcccaaagtttttagaggtccggcttagttgagctccttgcactccc 26633172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 180
Target Start/End: Complemental strand, 2263975 - 2263933
Alignment:
Q  138 ttggaggtccggcttgattgagcaccttgcactccctcaaggc 180  Q
    ||||||||||||||| |||||||||||||||||| ||||||||    
T  2263975 ttggaggtccggcttaattgagcaccttgcactctctcaaggc 2263933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 32956489 - 32956449
Alignment:
Q  81 ttttttatttaagtgggggtggatattagatttaatttttt 121  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  32956489 ttttttatttaagtgggggtgggttttagatttaatttttt 32956449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 6380240 - 6380349
Alignment:
Q  70 taacatatatattttttatttaagtgggg-gtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    |||||||||| |||||||||||||| ||| |||||||||||| |||||||||  | |||||||  | |  |||||||| ||||| || || |||||||||    
T  6380240 taacatatat-ttttttatttaagtagggagtggatattagacttaattttttgtttgaggcctgtggtatttggaggcccggcctggttaagcaccttg 6380338  T
Q  167 cactccctcaa 177  Q
    | |||||||||    
T  6380339 cgctccctcaa 6380349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 179
Target Start/End: Original strand, 36796526 - 36796636
Alignment:
Q  70 taacatatatattttttatttaagtggg-ggtggatattagatttaatttt-ttctgaggcccatagcttttggaggtccggcttgattgagcaccttgc 167  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||| ||||  |  |||| || |||  |||||||| ||||| || |||||||||||||    
T  36796526 taacatatatattttttatttaaatgggaggtgggtattagatttatttttcgttagaggtccgtagtatttggagg-ccggcctggttgagcaccttgc 36796624  T
Q  168 actccctcaagg 179  Q
    ||  ||||||||    
T  36796625 acagcctcaagg 36796636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 27432489 - 27432390
Alignment:
Q  83 ttttatttaagtg-ggggtggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaagg 179  Q
    ||||||||||||| ||||||| ||||| |||||||||||  |  ||||||| |||| |||| ||| | ||| || ||||||||||| ||| |||||||||    
T  27432489 ttttatttaagtgtggggtgggtattaaatttaatttttcgttagaggcccgtagcatttgaaggccgggcctggttgagcaccttacacaccctcaagg 27432390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 41908042 - 41907994
Alignment:
Q  125 aggcccatagcttttggaggtccggcttgattgagcaccttgcactccc 173  Q
    |||| |||| |||||||||| |||||||| ||||||||||||| |||||    
T  41908042 aggctcataacttttggaggcccggcttggttgagcaccttgctctccc 41907994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 1e-65; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 18 - 179
Target Start/End: Complemental strand, 12971381 - 12971219
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtg-ggggtggatattagatttaat 116  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||    
T  12971381 atgtccagataggagaactaaagtctagaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtggggggtgggtattagagttaat 12971282  T
Q  117 tttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaagg 179  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||    
T  12971281 tttttctgaggcccattgctcttggaggcccggcttgattgagcaccttgcactccctcaagg 12971219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 20470637 - 20470524
Alignment:
Q  70 taacatatatattttttatttaagtggggg-tggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    |||||||||||||||||||||| ||||||| ||| |||||||||||||||||  |  ||||||| |||| |||| ||||||||| || ||||||||||||    
T  20470637 taacatatatattttttatttatgtggggggtgggtattagatttaatttttcgttagaggcccgtagcatttgtaggtccggcctggttgagcaccttg 20470538  T
Q  167 cactccctcaaggc 180  Q
    ||| ||||||||||    
T  20470537 cacaccctcaaggc 20470524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 17487440 - 17487551
Alignment:
Q  70 taacatatatattttttatttaagt-gggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||  |  ||||||| || | |||||||| |||||||| ||||| ||||||    
T  17487440 taacatatatattttttatttaagtggggggtgggtattagatttaatttttcgttagaggcccgtatcatttggaggcccggcttggttgaggaccttg 17487539  T
Q  167 cactccctcaag 178  Q
    ||| ||||||||    
T  17487540 cacaccctcaag 17487551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 48722527 - 48722637
Alignment:
Q  70 taacatatatattttttatttaagt-gggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||  |  ||||||| |||| |||||||| ||||| || |||||||| |||    
T  48722527 taacatatatattttttatttaagtggggggtggatattaaatttaatttttcgttagaggcccgtagcatttggaggcccggcctggttgagcactttg 48722626  T
Q  167 cactccctcaa 177  Q
    ||| |||||||    
T  48722627 cacaccctcaa 48722637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 14084855 - 14084968
Alignment:
Q  70 taacatatatattttttatttaagtgg-gggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||  |   |||||| || | |||||||||||||  || ||||||||||||    
T  14084855 taacatatatattttttatttaagtggagggtgggtattagatttaatttttcgttaaaggcccgtaacatttggaggtccggtctggttgagcaccttg 14084954  T
Q  167 cactccctcaaggc 180  Q
    ||| ||||||||||    
T  14084955 cacaccctcaaggc 14084968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 33124787 - 33124900
Alignment:
Q  70 taacatatatattttttatttaagtggggg-tggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||||||||||| |||| ||| ||||| |||||||||||  |  ||||||| |||| |||||||| || || |||||||||||||||    
T  33124787 taacatatatattttttatttaagttggggatgggtattaaatttaatttttcgttagaggcccgtagcgtttggaggcccagcctgattgagcaccttg 33124886  T
Q  167 cactccctcaaggc 180  Q
    ||| ||||||||||    
T  33124887 cacaccctcaaggc 33124900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 63 - 171
Target Start/End: Original strand, 27703676 - 27703787
Alignment:
Q  63 aaagaagtaacatatatatttttt---atttaagt-gggggtggatattagatttaattttttctgaggcccatagcttttggaggtccggcttgattga 158  Q
    ||||||||||||||||||||||||   |||||||| |||||||| ||||||| |||||||||| || || || ||| ||||||||| || ||||| ||||    
T  27703676 aaagaagtaacatatatattttttttaatttaagtggggggtgggtattagacttaatttttt-tgtggtccgtagtttttggaggcccagcttggttga 27703774  T
Q  159 gcaccttgcactc 171  Q
    |||||||||||||    
T  27703775 gcaccttgcactc 27703787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 179
Target Start/End: Original strand, 51110256 - 51110369
Alignment:
Q  70 taacatatatatttttt-atttaagtggg-ggtggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcacctt 165  Q
    ||||||||||||||||| ||||||||||| ||| | |||||||||||||||||  |  ||||||| |||| |||||||| ||||| || |||||||||||    
T  51110256 taacatatatatttttttatttaagtgggtggtaggtattagatttaatttttcgttagaggcccgtagcatttggaggcccggcctggttgagcacctt 51110355  T
Q  166 gcactccctcaagg 179  Q
     ||| |||||||||    
T  51110356 acacaccctcaagg 51110369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 6150599 - 6150503
Alignment:
Q  86 tatttaagt-gggggtggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaagg 179  Q
    ||||||||| |||||||| |||||||||||||||||  |  ||||||| |||| |||||| | ||||| |||||||||||||||||| |||||||||    
T  6150599 tatttaagtagggggtgggtattagatttaatttttcgttagaggcccgtagcatttggaagcccggcctgattgagcaccttgcacaccctcaagg 6150503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 12884292 - 12884343
Alignment:
Q  70 taacatatatattttttatttaagt-gggggtggatattagatttaattttt 120  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  12884292 taacatatatattttttatttaagtaggggttggatattagatttaattttt 12884343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 179
Target Start/End: Complemental strand, 52055460 - 52055347
Alignment:
Q  70 taacatatatatttttt-atttaagtgggg-gtggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcacctt 165  Q
    |||||||||| ||| || |||||||||||| |||| ||||||| |||||||||| |  ||| |||||||| ||||||||  |||| || |||||||||||    
T  52055460 taacatatatttttattcatttaagtggggagtgggtattagacttaattttttatttgagacccatagcatttggaggctcggcctggttgagcacctt 52055361  T
Q  166 gcactccctcaagg 179  Q
    |||||||| |||||    
T  52055360 gcactcccccaagg 52055347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 10109616 - 10109509
Alignment:
Q  81 ttttttatttaagtggggg-tggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaa 177  Q
    ||||||||||||||||||| |||||||||||||||||||||  | |||| ||| |||  |||  |||  ||||||  ||||||||||||||| |||||||    
T  10109616 ttttttatttaagtggggggtggatattagatttaatttttcgtttgagacccgtagtatttaaaggctcggcttagttgagcaccttgcacaccctcaa 10109517  T
Q  178 ggctggac 185  Q
    ||| ||||    
T  10109516 ggccggac 10109509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 108
Target Start/End: Complemental strand, 30899564 - 30899526
Alignment:
Q  70 taacatatatattttttatttaagtgggggtggatatta 108  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  30899564 taacatatatattttttatttaagtgggggtgggtatta 30899526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 18128092 - 18128207
Alignment:
Q  70 taacatatatatttt--ttatttaagtggggg-tggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcacct 164  Q
    |||||||||| ||||  ||||||||||||||| ||| ||||| |||||||||||  |  |||| || |||| ||| |||| ||||| || ||||||||||    
T  18128092 taacatatattttttatttatttaagtgggggctgggtattaaatttaatttttcgttagaggtccgtagcatttagaggcccggcctggttgagcacct 18128191  T
Q  165 tgcactccctcaaggc 180  Q
    ||||| ||||||||||    
T  18128192 tgcacaccctcaaggc 18128207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 50552404 - 50552352
Alignment:
Q  70 taacatatatatttttt-atttaagtggggg-tggatattagatttaattttt 120  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||||||||||    
T  50552404 taacatatatatttttttatttaagtggggggtgggtattagatttaattttt 50552352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 1269468 - 1269382
Alignment:
Q  71 aacatatatat-tttttatttaagtgggg-gtggatattagatttaatt--ttttctgaggcccatagcttttggaggtccggcttg 153  Q
    ||||||||||| |||||||||||||| || |||||||||||| ||||||  |||| ||||||||||| ||||| || | ||||||||    
T  1269468 aacatatatatatttttatttaagtgaggtgtggatattagacttaattgtttttttgaggcccataacttttagaagcccggcttg 1269382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 29208253 - 29208303
Alignment:
Q  70 taacatatatattttttatttaagtgggggtggatattagatttaatttttt 121  Q
    |||||||||| |||||||||||||||||||||  ||||||| ||||||||||    
T  29208253 taacatatat-ttttttatttaagtgggggtgagtattagacttaatttttt 29208303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 28189360 - 28189327
Alignment:
Q  30 gagaactaaagtctacaaaaaactcaaacgtgta 63  Q
    ||||||||||||||| ||||||||||||||||||    
T  28189360 gagaactaaagtctaaaaaaaactcaaacgtgta 28189327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 28886140 - 28886180
Alignment:
Q  77 tatattttttatttaagtgggggtggatattagatttaatt 117  Q
    |||||||||||||| ||||  ||||||||||||||||||||    
T  28886140 tatattttttatttgagtgaaggtggatattagatttaatt 28886180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 3e-63; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 15457475 - 15457314
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    |||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |    
T  15457475 atgtccggataagtgaactaaagtctagaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtgggtattagagttaa-t 15457377  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggc 180  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||    
T  15457376 ttttctgaggcccataacttttggaggcccggcttgattgagcaccttgcactctctcaaggc 15457314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 18173029 - 18173187
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    ||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  18173029 atgtccatataggagaa-taaagtctagaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtgggtattagagttaatt 18173127  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaa 177  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  18173128 ttttctgaggtccatagctcttggaggcccggcttgattgagcaccttgcactccctcaa 18173187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 17117726 - 17117888
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    ||||||||||| |||| ||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  17117726 atgtccagataggagagctaaaatctagaaaaaattcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtgagtattagatttaatt 17117825  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggc 180  Q
    |||| || ||||||||| |||||||||||||||||||||||||||||| |||| |||||||||    
T  17117826 ttttgtggggcccatagtttttggaggtccggcttgattgagcaccttacacttcctcaaggc 17117888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 18916143 - 18916304
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    ||||||||||   |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  18916143 atgtccagattgaagaactaaagtctagaaaaacctcaaacgtgtaaaaaagtaacatatatattttttatttaagtgggggtgggtattagagttaatt 18916242  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaagg 179  Q
    |||| | |||||||||||| ||||||| ||| ||||||||||||||||||||| ||||||||    
T  18916243 tttttttaggcccatagctattggaggcccgacttgattgagcaccttgcacttcctcaagg 18916304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 38985798 - 38985949
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    ||||||||||| ||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||| ||||||    
T  38985798 atgtccagataggagaa-taaagtttagaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtggggtggggtattagagttaatt 38985896  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggc 180  Q
    ||||||||||||||| ||          |||||||||||||||||||||||||| ||||||||    
T  38985897 ttttctgaggcccatcgc----------ccggcttgattgagcaccttgcactctctcaaggc 38985949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 36481315 - 36481204
Alignment:
Q  70 taacatatatattttttatttaagtggggg-tggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||  |  ||||||| |||| |||||||||||||| || ||||||||||||    
T  36481315 taacatatatattttttatttaagtggggggtgggtattagatttaatttttcgttagaggcccgtagcatttggaggtccggcctggttgagcaccttg 36481216  T
Q  167 cactccctcaag 178  Q
    ||| ||||||||    
T  36481215 cacaccctcaag 36481204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 6530568 - 6530456
Alignment:
Q  70 taacatatatattttttatttaagtgggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttgc 167  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||  |  ||||||| || | ||| |||||||||  |  ||||||||||| |    
T  6530568 taacgtatatattttttatttaagtgggggtggatattagatttaatttttcgttagaggcccgtatcatttagaggtccggtctcgttgagcaccttac 6530469  T
Q  168 actccctcaaggc 180  Q
    || ||||||||||    
T  6530468 acaccctcaaggc 6530456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 13020331 - 13020218
Alignment:
Q  70 taacatatatatttttt-atttaagtgggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||||||||  |  ||||||| ||||  ||||||| ||| | || ||||||||||||    
T  13020331 taacatatatatttttttatttaagtgggggtgggtattaaatttaatttttcgttagaggcccgtagcaattggaggcccgccctggttgagcaccttg 13020232  T
Q  167 cactccctcaaggc 180  Q
    ||| ||||||||||    
T  13020231 cacaccctcaaggc 13020218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 183
Target Start/End: Original strand, 18676466 - 18676582
Alignment:
Q  70 taacatatatattttttatttaagtg-ggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||  |  ||  ||| |||| |||||| | ||||| || ||||||||||||    
T  18676466 taacatatatattttttatttaagtgaggggtgggtattagatttaatttttcgttagaaacccgtagcatttggatgcccggcctggttgagcaccttg 18676565  T
Q  167 cactccctcaaggctgg 183  Q
    ||| | |||||||||||    
T  18676566 cacactctcaaggctgg 18676582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 21747902 - 21747954
Alignment:
Q  128 cccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggc 180  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  21747902 cccatagcttttggaagcccggcttgattgagcaccttgcactccctcaaggc 21747954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 26151903 - 26152014
Alignment:
Q  70 taacatatatattttttatttaagtgggggtggatattagatttaatttt-ttctgaggcccatagcttttggaggtccggcttgattgagcaccttgca 168  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| ||||  |  ||| ||| |||| |||||||| ||| | || ||||||| ||||||    
T  26151903 taacatatatattttttatttaaatgggggtgggtattagatttatttttcgttagagacccgtagcatttggaggcccgacctggttgagcatcttgca 26152002  T
Q  169 ctccctcaaggc 180  Q
    | ||||||||||    
T  26152003 caccctcaaggc 26152014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 42411712 - 42411822
Alignment:
Q  70 taacatatatattttttatttaagtggggg-tggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    |||||||||||| |||| |||||||||||| ||| |||||||||||||||||  |  ||||| | ||||  ||||||| ||||| |||||||||||||||    
T  42411712 taacatatatatattttttttaagtgggggttgggtattagatttaatttttcgttagaggctcttagcaattggaggcccggcctgattgagcaccttg 42411811  T
Q  167 cactccctcaa 177  Q
    ||| |||||||    
T  42411812 cacaccctcaa 42411822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 12269335 - 12269285
Alignment:
Q  70 taacatatatattttttatttaagtgggggtggatattagatttaattttt 120  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  12269335 taacatatatattttttatttaagctggggtggatattagatttaattttt 12269285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 25222232 - 25222119
Alignment:
Q  70 taacatatatattttttatttaagtggg-ggtggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||||||||||| || ||| | |||||||||||||||||  |  ||||||| |||| |||||||| ||||| || |||||||||||     
T  25222232 taacatatatattttttatttaagtaggcggtcggtattagatttaatttttcgttagaggcccgtagcatttggaggcccggcctggttgagcaccttt 25222133  T
Q  167 cactccctcaaggc 180  Q
    ||  ||||||||||    
T  25222132 cataccctcaaggc 25222119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 4855899 - 4855786
Alignment:
Q  70 taacatatatatttttt-atttaagtgg-gggtggatattagatttaattttttct-gaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||||||| ||||   | ||||||| |||  |||||||||||||| || ||||||||||||    
T  4855899 taacatatatatttttttatttaaatggagggtgggtattagatttatttttcgttagaggcccgtagaatttggaggtccggcctggttgagcaccttg 4855800  T
Q  167 cactccctcaaggc 180  Q
    ||| ||||||||||    
T  4855799 cacaccctcaaggc 4855786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 185
Target Start/End: Original strand, 42759903 - 42760020
Alignment:
Q  70 taacatatatatttttt-atttaagtgggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||  |  ||||||  |||| |||||||| ||| | |  ||||||||||||    
T  42759903 taacatatatatttttttatttaagtgggg-tggatattagatttaatttttcgttagaggcctgtagcatttggaggcccgacctagttgagcaccttg 42760001  T
Q  167 cactccctcaaggctggac 185  Q
     || |||||||||| ||||    
T  42760002 tacaccctcaaggccggac 42760020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 179
Target Start/End: Original strand, 41096693 - 41096806
Alignment:
Q  70 taacatatatat-tttttatttaagt-gggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcacctt 165  Q
    |||||||||||| ||||||||||||| |||||||| ||||| |||||||||||  |  ||| ||| |||| ||| |||||||||| |||||||| |||||    
T  41096693 taacatatatatatttttatttaagtggggggtgggtattaaatttaatttttcgttagagacccgtagcatttagaggtccggcctgattgagtacctt 41096792  T
Q  166 gcactccctcaagg 179  Q
    |||| || ||||||    
T  41096793 gcacaccttcaagg 41096806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 19367574 - 19367683
Alignment:
Q  70 taacatatatattttttatttaagtggggg-tggatattagatttaatttt-ttctgaggcccatagcttttggaggtccggcttgattgagcaccttgc 167  Q
    ||||||||||||||||||||||| |||||| | | ||||||||||||||||  |  ||| ||| |||| |||||||| ||| | || |||||||||||||    
T  19367574 taacatatatattttttatttaaatgggggataggtattagatttaattttcgttagagacccgtagcatttggaggcccgacctggttgagcaccttgc 19367673  T
Q  168 actccctcaa 177  Q
    || |||||||    
T  19367674 acaccctcaa 19367683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 177
Target Start/End: Complemental strand, 45042295 - 45042187
Alignment:
Q  72 acatatatattttttatttaagtgggg-gtggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttgca 168  Q
    |||||||| |||||||||||| |  || |||| ||||||| |||||||||| |  |||||||||| | |||||||| ||| | ||||||||||||||||     
T  45042295 acatatattttttttatttaaataaggagtgggtattagacttaattttttgtttgaggcccataacatttggaggcccgacctgattgagcaccttgcg 45042196  T
Q  169 ctccctcaa 177  Q
    |||||||||    
T  45042195 ctccctcaa 45042187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 9029531 - 9029471
Alignment:
Q  63 aaagaagtaacatatatatt-ttttatttaagtgggg-gtggatattagatttaatttttt 121  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||||||| ||||||||||    
T  9029531 aaagaaataacatatatatttttttatttaagtggggtgtggatattagacttaatttttt 9029471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 179
Target Start/End: Complemental strand, 45618886 - 45618774
Alignment:
Q  70 taacatatatatttttt-atttaagtggggg-tggatattagatttaattttttct-gaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||| |||||| |||||| ||| ||||||||||| ||||   | ||||||| |||| |||||||| ||||| ||  |||||||||||    
T  45618886 taacatatatatttttttatttaaatggggggtgggtattagatttatttttcgttagaggcccgtagcatttggaggcccggcctggctgagcaccttg 45618787  T
Q  167 cactccctcaagg 179  Q
    ||| |||||||||    
T  45618786 cacaccctcaagg 45618774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 21747319 - 21747382
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatat 81  Q
    |||| ||||||  |||||||||||||| ||||| |||||||||||||| |||||| ||||||||    
T  21747319 atgttcagatagaagaactaaagtctagaaaaacctcaaacgtgtaaaaaagtaatatatatat 21747382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 165
Target Start/End: Original strand, 32186297 - 32186400
Alignment:
Q  63 aaagaagtaacatatatattttttatttaagtgggggtggatattagatttaat-tttttctgaggcccatagcttttggaggtccggcttgattgagca 161  Q
    ||||||||||||| ||  ||||| |||||| ||||||||||||||| | ||||| ||||| | |||| ||||| |||| ||||||||||||  ||||||     
T  32186297 aaagaagtaacatgtaattttttaatttaattgggggtggatattatacttaatgttttttttaggctcatagtttttagaggtccggcttcgttgagct 32186396  T
Q  162 cctt 165  Q
    ||||    
T  32186397 cctt 32186400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 177
Target Start/End: Complemental strand, 7993542 - 7993433
Alignment:
Q  70 taacatatatattttttatttaagt-gggggtggatattagatttaattttttctgag-gcccatagcttttggaggtccggcttgattgagcaccttgc 167  Q
    ||||||||||||||||||||||| | |||||||| ||||| |||||||||||  | || | |  |||| |||||||| ||||   |||||||||||||||    
T  7993542 taacatatatattttttatttaaatagggggtgggtattaaatttaatttttcgttagaggctgtagcatttggaggcccggtcagattgagcaccttgc 7993443  T
Q  168 actccctcaa 177  Q
    || |||||||    
T  7993442 acaccctcaa 7993433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 31273318 - 31273370
Alignment:
Q  69 gtaacatatatattttttatttaagtgggggtggatattagatttaatttttt 121  Q
    |||||||||||||||||||||| ||||||||||| ||||| | ||||| ||||    
T  31273318 gtaacatatatattttttatttgagtgggggtgggtattaaacttaatatttt 31273370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 173
Target Start/End: Complemental strand, 2063702 - 2063612
Alignment:
Q  84 tttatttaagtgggggtggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttgcactccc 173  Q
    ||||||||||||||| ||| ||||||| |||||||||| |  ||||||| |||  |||||||| ||||  || |||| ||||||||||||||    
T  2063702 tttatttaagtgggg-tgggtattagacttaattttttgtttgaggcccgtagtatttggaggcccggtctggttgaacaccttgcactccc 2063612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 8e-55; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 18 - 179
Target Start/End: Complemental strand, 31860978 - 31860815
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaa-- 115  Q
    |||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||      
T  31860978 atgtccagatagaagaactaaagtctagaaaaacctcaaacgtgtaaagaagtaacatatatattttttatttaggtgggggtgggtattagagttaatt 31860879  T
Q  116 ttttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaagg 179  Q
    |||||| | ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  31860878 tttttttttaggcccatagcttttcgaggtccggcttgattgagcaccttgcattccctcaagg 31860815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 188
Target Start/End: Original strand, 1093129 - 1093299
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    ||||||||||| ||||||||||||||| ||||||||||||| || |||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||    
T  1093129 atgtccagataggagaactaaagtctagaaaaaactcaaacatgcaaagaagtaacatatatagtttttatttaagtgggggtgggtattagagttaatt 1093228  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggctggacatg 188  Q
    ||||| ||||||||||  ||||| ||| ||| ||| ||||||||||||||||||||||||||  |||||||    
T  1093229 ttttcggaggcccataaattttgaaggcccgacttaattgagcaccttgcactccctcaaggtcggacatg 1093299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 1690722 - 1690884
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaa-t 116  Q
    ||||||| ||| |||||||||| | || |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| |||| |    
T  1690722 atgtccaaataggagaactaaaatttagaaaaaactcaaacgtgtaaagaagtaacatatatatattttatttaagtggaggtgggtattagagttaatt 1690821  T
Q  117 tttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaagg 179  Q
    ||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||| ||||    
T  1690822 tttttctgaggcccatagcttttggaggctcggcttgattgagcatcttgcactcccttaagg 1690884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 29308556 - 29308718
Alignment:
Q  18 atgtccagataagagaactaaagtctacaaaaaactcaaacgtgtaaagaagtaacatatatattttttatttaagtgggggtggatattagatttaatt 117  Q
    |||||||||||  | ||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||    
T  29308556 atgtccagatagaaaaactaaagtttagaaaaaactcaaacgtgtaaagaagtaccatatatattttttatttaagtgggggtgggtattagagttaatt 29308655  T
Q  118 ttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggc 180  Q
    ||||| || ||| ||| ||| |||||| ||| |||||||||||||||||||||||||||||||    
T  29308656 ttttcggaagcctataacttctggaggcccgacttgattgagcaccttgcactccctcaaggc 29308718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 6360670 - 6360558
Alignment:
Q  70 taacatatatattttttatttaagtggggg-tggatattagatttaattttttct-gaggcccatagcttttggaggtccggcttgattgagcaccttgc 167  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||   | ||||||| |||| |||||||| | ||| ||||||||||||||||    
T  6360670 taacatatatattttttatttaagtggggggtggatattagatttaattttcgttagaggcccgtagcatttggaggcctggcctgattgagcaccttgc 6360571  T
Q  168 actccctcaaggc 180  Q
    || ||||||||||    
T  6360570 acaccctcaaggc 6360558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 31258612 - 31258726
Alignment:
Q  70 taacatatatattttttatttaagtggggg--tggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcacctt 165  Q
    |||||||||||||||||||||| |||||||  ||| |||||||||||||||||  |  ||||||| |||| |||| ||||||||| || |||||||||||    
T  31258612 taacatatatattttttatttatgtgggggggtgggtattagatttaatttttcgttagaggcccgtagcatttgtaggtccggcctggttgagcacctt 31258711  T
Q  166 gcactccctcaaggc 180  Q
    |||| ||||||||||    
T  31258712 gcacaccctcaaggc 31258726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 24455129 - 24455016
Alignment:
Q  70 taacatatatattttttatttaagtg-ggggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||  |  |||| || |||| |||||||| ||| | || ||||||||||||    
T  24455129 taacatatatattttttatttaagtggggggtgggtattagatttaatttttcattagaggtccgtagcatttggaggcccgacctggttgagcaccttg 24455030  T
Q  167 cactccctcaaggc 180  Q
    ||| ||||||||||    
T  24455029 cacaccctcaaggc 24455016  T

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Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 5877017 - 5877091
Alignment:
Q  104 tattagatttaattttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaagg 179  Q
    ||||||| |||||||| |||||||||||||||| ||||||| ||| |||||||||||||||||||||||| |||||    
T  5877017 tattagagttaatttt-tctgaggcccatagctcttggaggcccgacttgattgagcaccttgcactcccccaagg 5877091  T

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Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 29401047 - 29400939
Alignment:
Q  72 acatatatattttttatttaagtgggggtggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttgcac 169  Q
    ||||||||||||||||||||||||| ||||| ||||| |||||||||||| |  ||||||| |||| ||||||   |||   ||||||||||||||||||    
T  29401047 acatatatattttttatttaagtggaggtgggtattatatttaattttttgttagaggcccgtagcatttggaaacccgatctgattgagcaccttgcac 29400948  T
Q  170 tccctcaag 178  Q
     ||||||||    
T  29400947 accctcaag 29400939  T

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Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 57597 - 57498
Alignment:
Q  70 taacatatatattttttatttaagtgggg-gtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    |||||||||||| |||||||||||||||| |||| ||||||| |||||||||  | |||||||| |||| |||||||||||| | || ||||||||||||    
T  57597 taacatatatatcttttatttaagtggggagtgggtattagacttaattttttgtttgaggcccgtagcatttggaggtccgacctggttgagcaccttg 57498  T

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Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 183
Target Start/End: Original strand, 12622144 - 12622231
Alignment:
Q  98 ggtggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggctgg 183  Q
    |||||||||||||||||||||||| |  |||| || |||| |||||||| ||||| || ||||||||||||||| |||||||||||||    
T  12622144 ggtggatattagatttaattttttgttagaggtccgtagcatttggaggcccggcctggttgagcaccttgcacaccctcaaggctgg 12622231  T

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Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 3515005 - 3515119
Alignment:
Q  70 taacatatatatttttt-atttaagtgggggtgga-tattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcacctt 165  Q
    ||||||||||||||||| |||||||||||||  || ||||| |||||||||||  |  ||||||| |||| |||| ||| |||||||| |||||||||||    
T  3515005 taacatatatatttttttatttaagtggggggtgagtattaaatttaatttttcgttagaggcccgtagcatttgtaggcccggcttggttgagcacctt 3515104  T
Q  166 gcactccctcaaggc 180  Q
    |||| ||||||||||    
T  3515105 gcacaccctcaaggc 3515119  T

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Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 6754116 - 6754003
Alignment:
Q  70 taacatatatattttttatttaagtgggg-gtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||||||||||||||| |||  ||||||| |||||||||     ||||||| |||| |||||||||||| | ||||||| |||||||    
T  6754116 taacatatatattttttatttaagtggggagtgagtattagaattaatttttcgatagaggcccgtagcatttggaggtccgacctgattgaacaccttg 6754017  T
Q  167 cactccctcaaggc 180  Q
    |||  |||||||||    
T  6754016 cacatcctcaaggc 6754003  T

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Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 19231507 - 19231407
Alignment:
Q  84 tttatttaagtgggggtggatattagatttaat--tttttctgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaaggct 181  Q
    |||||||||||||||||| ||||||||  ||||  ||||| | || || ||| |||||||||||||| |||| |||||||||||||||| || |||||||    
T  19231507 tttatttaagtgggggtgaatattagacataatattttttttaagacctataacttttggaggtccgacttggttgagcaccttgcacttccccaaggct 19231408  T
Q  182 g 182  Q
    |    
T  19231407 g 19231407  T

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Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 2618265 - 2618214
Alignment:
Q  70 taacatatatattttttatttaagtg-ggggtggatattagatttaattttt 120  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  2618265 taacatatatattttttatttaagtggggggtgggtattagatttaattttt 2618214  T

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Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 160
Target Start/End: Complemental strand, 350333 - 350230
Alignment:
Q  63 aaagaagtaacatatatattttt---tatttaagtgggggtggatattagatttaat---tttttctgaggcccatagcttttggaggtccggcttgatt 156  Q
    ||||||||||||||||| |||||   |||||||||||||   ||||||||| |||||   ||||| ||| |||||||| |||| ||||||||| ||||||    
T  350333 aaagaagtaacatatatttttttatttatttaagtggggtatgatattagacttaatttatttttttgaagcccataggttttagaggtccggtttgatt 350234  T
Q  157 gagc 160  Q
    ||||    
T  350233 gagc 350230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 2618320 - 2618285
Alignment:
Q  28 aagagaactaaagtctacaaaaaactcaaacgtgta 63  Q
    ||||||||||||||||| ||||||||||||||||||    
T  2618320 aagagaactaaagtctagaaaaaactcaaacgtgta 2618285  T

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Target: scaffold0035 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 22919 - 23032
Alignment:
Q  70 taacatatatattttttatttaagtgg-gggtggatattagatttaattttt--tctgaggcccatagcttttggaggtccggcttgattgagcaccttg 166  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||  |  ||| ||| || | |||||||||||||| || |||||||||||     
T  22919 taacatatatattttttatttaagtggagggtggatattagatttaatttttcgttagagacccgtatcatttggaggtccggcctggttgagcacctta 23018  T
Q  167 cactccctcaaggc 180  Q
    ||| |||| |||||    
T  23019 cacaccctgaaggc 23032  T

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Target: scaffold0126 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 74 - 180
Target Start/End: Complemental strand, 16610 - 16501
Alignment:
Q  74 atatatattttttatttaagtggggg-tggatattagatttaattttttct--gaggcccatagcttttggaggtccggcttgattgagcaccttgcact 170  Q
    |||||||| ||||||||||||||||| ||| |||||||||||||||||  |  ||||||| |||| |||||||| ||||  || |||||||||||||||     
T  16610 atatatatcttttatttaagtggggggtgggtattagatttaatttttcgttagaggcccgtagcatttggaggcccggtctggttgagcaccttgcaca 16511  T
Q  171 ccctcaaggc 180  Q
    ||||||||||    
T  16510 ccctcaaggc 16501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 81 - 173
Target Start/End: Original strand, 46338 - 46433
Alignment:
Q  81 ttttttatttaagtgggggtggatattagatttaattttttc---tgaggcccatagcttttggaggtccggcttgattgagcaccttgcactccc 173  Q
    ||||||||||||||| | |||| ||||||| ||||||||||    |||||||||| || |||| ||||||||| || |||||||||||||||||||    
T  46338 ttttttatttaagtgtgtgtgggtattagacttaatttttttgtttgaggcccatggcatttgaaggtccggcctggttgagcaccttgcactccc 46433  T

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Target: scaffold0181 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 183
Target Start/End: Original strand, 18128 - 18232
Alignment:
Q  82 tttttatttaagtgggggtgga-tattagatttaattttttctga--ggcccatagcttttggaggtccggcttgattgagcaccttgcactccctcaag 178  Q
    ||||||||||| ||||||  || |||||||||||||||||  | |  |||||||| | |||||||| ||||| ||||||| |||||| ||| ||||||||    
T  18128 tttttatttaaatggggggtgagtattagatttaatttttcgttaaaggcccataacatttggaggcccggcctgattgaacacctttcacaccctcaag 18227  T
Q  179 gctgg 183  Q
    |||||    
T  18228 gctgg 18232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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