View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1591_high_8 (Length: 250)
Name: NF1591_high_8
Description: NF1591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1591_high_8 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 5 - 250
Target Start/End: Complemental strand, 26107026 - 26106781
Alignment:
| Q |
5 |
gagtgagatgaaaacattaaaattgtaaacttagtccaaaaaagaaattgtaattgacattgtatctactatttgctggcatctgtgtattgtaagctat |
104 |
Q |
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| T |
26107026 |
gagtgtgatgacaacattaaaattgtaaacttagtccaaaaaagaaattgtaattgacattgtatctattatttgctggcatctgtgtattgtaagctat |
26106927 |
T |
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| Q |
105 |
tactttgtgatttcttgtgcaatattgttcacaaagtactttgtaatttctttatcaaaatctgtttgatgacatgaaacattcttttcaacttttgcca |
204 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
26106926 |
tactttgtgatttcttgtgcaatattgttcacaaagtactttgtaatttctttatcaaaatctgtcagatgacatgaaacattcttttcaacttttgcca |
26106827 |
T |
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| Q |
205 |
tttcatttcatataatcatactatggttttaaccctccaattcctc |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26106826 |
tttcatttcatataatcatactatggttttaaccctccaattcctc |
26106781 |
T |
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