View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1591_low_15 (Length: 201)
Name: NF1591_low_15
Description: NF1591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1591_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 161; Significance: 4e-86; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 161; E-Value: 4e-86
Query Start/End: Original strand, 14 - 182
Target Start/End: Complemental strand, 698408 - 698240
Alignment:
| Q |
14 |
aagcataggaaaacaaaaaacagatcagtcagataagtttaccaaggttccaatctctggtttaggttccaataactcggccataggctcaattttatcc |
113 |
Q |
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| T |
698408 |
aagcataggaaaacaaaaaacagatcagtcagctaagtttaccaaggtcccaatctctggtttaggttccaataactcggccataggctcaattttatcc |
698309 |
T |
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| Q |
114 |
ataagttttttatatttcttctcttttctctcaaatttatgtagacacttctgatgataatttgttgct |
182 |
Q |
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| T |
698308 |
ataagttttttatatttcttctcttttctctcaaatttatgtagacacttctgatgataatttgttgct |
698240 |
T |
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