View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15923_high_8 (Length: 313)
Name: NF15923_high_8
Description: NF15923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15923_high_8 |
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Alignment Details
Target: chr3 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 15 - 297
Target Start/End: Original strand, 40666102 - 40666384
Alignment:
| Q |
15 |
aagaatattctaagcatcttttcttgatgttgtcacatcatcaagaaacatgaccagtgttgtgacaagggaagaagaaagcttctgtcattgaatcatt |
114 |
Q |
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| T |
40666102 |
aagaatattctaagcatcttttcttgatgttgtcacatcatcaagaaacatgaccagtgttgtgacaagggaagaagaaagcttctgtcattgaatcatt |
40666201 |
T |
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| Q |
115 |
ggtccatgatttcattaatcaatgccacttctacttatcaggacaatatataccaatattacactttctgctagcaaaaaaggaaccgtaatgagcttat |
214 |
Q |
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| T |
40666202 |
ggtccatgatttcattaatcaatgccacttctacttatcaggacaatatataccaatattacactttctgctagcaaaaaaggaaccgtaatgagcttat |
40666301 |
T |
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| Q |
215 |
gattcacattaatgttgatttgaatatatatggacagtcctccttctccttcttgcatcattgttgcttgtgatgccacaagg |
297 |
Q |
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| T |
40666302 |
gattcacattaatgttgatttgaatatatatggacagtcctccttctccttcttgcatcattgttgcttgtgatgccacaagg |
40666384 |
T |
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