View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15923_low_14 (Length: 294)

Name: NF15923_low_14
Description: NF15923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15923_low_14
NF15923_low_14
[»] chr7 (57 HSPs)
chr7 (152-294)||(19371408-19371557)
chr7 (13-82)||(19371553-19371622)
chr7 (13-74)||(27723051-27723112)
chr7 (13-71)||(6474933-6474991)
chr7 (16-74)||(38598706-38598764)
chr7 (13-74)||(7525661-7525721)
chr7 (11-74)||(39458776-39458839)
chr7 (13-74)||(21094171-21094232)
chr7 (13-74)||(34729044-34729105)
chr7 (13-73)||(8949156-8949216)
chr7 (14-74)||(12170385-12170445)
chr7 (19-74)||(5096182-5096237)
chr7 (19-74)||(24052319-24052374)
chr7 (19-74)||(39753261-39753316)
chr7 (13-74)||(1748727-1748789)
chr7 (13-71)||(2275265-2275323)
chr7 (13-71)||(17255239-17255296)
chr7 (13-71)||(21305621-21305678)
chr7 (13-74)||(5800095-5800156)
chr7 (13-74)||(10040258-10040318)
chr7 (13-74)||(21081376-21081437)
chr7 (13-74)||(25834374-25834434)
chr7 (13-74)||(27724891-27724952)
chr7 (13-74)||(39434781-39434842)
chr7 (13-74)||(47901622-47901682)
chr7 (30-74)||(27724949-27724993)
chr7 (19-71)||(37546562-37546614)
chr7 (39-74)||(2750136-2750171)
chr7 (39-74)||(19396890-19396925)
chr7 (15-74)||(21093776-21093834)
chr7 (39-74)||(21766385-21766420)
chr7 (39-74)||(25489711-25489746)
chr7 (39-74)||(42963440-42963475)
chr7 (20-74)||(7628513-7628566)
chr7 (13-74)||(15647288-15647347)
chr7 (20-74)||(19497688-19497742)
chr7 (16-74)||(21635210-21635267)
chr7 (13-74)||(27241162-27241221)
chr7 (40-74)||(47741317-47741351)
chr7 (20-74)||(48007006-48007059)
chr7 (40-74)||(48525775-48525809)
chr7 (41-74)||(7468667-7468700)
chr7 (41-74)||(7775213-7775246)
chr7 (41-74)||(9412467-9412500)
chr7 (30-71)||(16849230-16849271)
chr7 (32-73)||(20692200-20692241)
chr7 (32-73)||(20697678-20697719)
chr7 (41-74)||(21521002-21521035)
chr7 (41-74)||(27250573-27250606)
chr7 (13-74)||(28451077-28451138)
chr7 (41-74)||(29675050-29675083)
chr7 (41-74)||(30466899-30466932)
chr7 (13-74)||(41747900-41747960)
chr7 (41-74)||(48989921-48989954)
chr7 (39-71)||(23162335-23162367)
chr7 (41-73)||(44522907-44522939)
chr7 (39-71)||(45001120-45001152)
[»] chr3 (65 HSPs)
chr3 (108-228)||(50100478-50100597)
chr3 (5-88)||(50098739-50098822)
chr3 (13-74)||(18875254-18875315)
chr3 (13-74)||(22004305-22004366)
chr3 (13-74)||(22011822-22011883)
chr3 (13-74)||(52957761-52957821)
chr3 (13-71)||(51833939-51833997)
chr3 (13-75)||(18732400-18732461)
chr3 (13-74)||(9860992-9861052)
chr3 (13-74)||(15445711-15445771)
chr3 (13-74)||(21824584-21824644)
chr3 (13-74)||(27336470-27336531)
chr3 (13-74)||(27947593-27947654)
chr3 (13-74)||(42392078-42392139)
chr3 (13-74)||(54767558-54767619)
chr3 (14-70)||(18461470-18461526)
chr3 (13-65)||(18722315-18722367)
chr3 (14-74)||(37431357-37431416)
chr3 (19-74)||(37980634-37980689)
chr3 (19-74)||(44176682-44176737)
chr3 (20-74)||(6454776-6454829)
chr3 (13-71)||(17590006-17590064)
chr3 (13-67)||(19420304-19420357)
chr3 (17-71)||(25842190-25842244)
chr3 (13-71)||(45643973-45644030)
chr3 (13-74)||(13155613-13155673)
chr3 (13-74)||(13496046-13496106)
chr3 (13-66)||(13875340-13875393)
chr3 (13-74)||(21030743-21030803)
chr3 (13-74)||(22177221-22177282)
chr3 (13-74)||(46732059-46732120)
chr3 (13-65)||(3890360-3890411)
chr3 (28-76)||(26130686-26130734)
chr3 (258-294)||(50100622-50100658)
chr3 (20-71)||(261092-261143)
chr3 (19-74)||(3807006-3807061)
chr3 (13-72)||(7638722-7638781)
chr3 (30-73)||(12565703-12565746)
chr3 (30-73)||(13260106-13260149)
chr3 (39-74)||(21595312-21595347)
chr3 (39-74)||(27400236-27400271)
chr3 (31-74)||(39851485-39851528)
chr3 (13-74)||(3283445-3283504)
chr3 (13-71)||(3418646-3418704)
chr3 (13-74)||(14030994-14031053)
chr3 (13-71)||(19579714-19579771)
chr3 (13-71)||(19592330-19592388)
chr3 (20-74)||(27108883-27108936)
chr3 (20-74)||(39904106-39904159)
chr3 (21-71)||(40360180-40360230)
chr3 (13-74)||(45702215-45702274)
chr3 (13-74)||(2454016-2454076)
chr3 (41-74)||(9861602-9861635)
chr3 (13-74)||(12673201-12673262)
chr3 (41-74)||(14899658-14899691)
chr3 (13-74)||(15569587-15569648)
chr3 (41-74)||(22525958-22525991)
chr3 (41-74)||(24171186-24171219)
chr3 (13-74)||(27327816-27327876)
chr3 (13-74)||(27334053-27334113)
chr3 (41-74)||(28039391-28039424)
chr3 (13-74)||(39822799-39822859)
chr3 (41-74)||(45885755-45885788)
chr3 (30-74)||(18196927-18196971)
chr3 (39-71)||(19559149-19559181)
[»] chr1 (60 HSPs)
chr1 (5-71)||(17605524-17605589)
chr1 (13-74)||(16143613-16143674)
chr1 (13-74)||(31844957-31845018)
chr1 (17-74)||(48419746-48419803)
chr1 (13-74)||(50944827-50944888)
chr1 (13-74)||(37231236-37231295)
chr1 (13-74)||(1570399-1570459)
chr1 (13-74)||(10172217-10172277)
chr1 (13-74)||(16823758-16823818)
chr1 (13-74)||(34011370-34011430)
chr1 (13-74)||(37706187-37706248)
chr1 (13-74)||(49368131-49368191)
chr1 (13-70)||(50946376-50946433)
chr1 (18-74)||(27926111-27926167)
chr1 (19-74)||(8028351-8028406)
chr1 (16-71)||(27208717-27208772)
chr1 (15-74)||(34969504-34969563)
chr1 (13-72)||(46022238-46022297)
chr1 (13-74)||(773333-773395)
chr1 (13-71)||(9971659-9971717)
chr1 (13-74)||(11978036-11978098)
chr1 (17-71)||(45943151-45943205)
chr1 (13-74)||(925167-925227)
chr1 (17-74)||(2666028-2666085)
chr1 (13-74)||(8573868-8573929)
chr1 (13-74)||(22094121-22094182)
chr1 (5-74)||(34747641-34747709)
chr1 (13-74)||(46273660-46273720)
chr1 (18-74)||(8096057-8096113)
chr1 (13-74)||(13315352-13315415)
chr1 (13-71)||(46997172-46997227)
chr1 (20-71)||(32589535-32589586)
chr1 (13-72)||(48995599-48995658)
chr1 (15-73)||(2664826-2664884)
chr1 (15-65)||(11407136-11407186)
chr1 (13-74)||(14258893-14258954)
chr1 (20-74)||(29689288-29689342)
chr1 (16-74)||(33934328-33934386)
chr1 (14-60)||(43610408-43610454)
chr1 (13-87)||(48716031-48716104)
chr1 (41-74)||(4972515-4972548)
chr1 (17-74)||(7297115-7297172)
chr1 (41-74)||(8007294-8007327)
chr1 (13-70)||(14746594-14746651)
chr1 (41-74)||(16830459-16830492)
chr1 (41-74)||(17580034-17580067)
chr1 (41-74)||(18149318-18149351)
chr1 (41-74)||(20159869-20159902)
chr1 (41-74)||(20906614-20906647)
chr1 (13-74)||(21336011-21336072)
chr1 (13-74)||(25825115-25825174)
chr1 (41-74)||(27362001-27362034)
chr1 (41-74)||(46625208-46625241)
chr1 (13-74)||(47402961-47403022)
chr1 (41-74)||(48419337-48419370)
chr1 (13-74)||(49162540-49162601)
chr1 (39-71)||(15597197-15597229)
chr1 (18-74)||(28071777-28071833)
chr1 (39-71)||(40808930-40808962)
chr1 (41-73)||(48455141-48455173)
[»] scaffold1578 (1 HSPs)
scaffold1578 (13-74)||(1406-1467)
[»] chr5 (45 HSPs)
chr5 (14-74)||(28868447-28868507)
chr5 (13-70)||(6061837-6061894)
chr5 (13-74)||(7464257-7464318)
chr5 (13-76)||(9523755-9523816)
chr5 (13-71)||(25524495-25524553)
chr5 (13-74)||(36266969-36267031)
chr5 (13-74)||(19288966-19289027)
chr5 (13-74)||(28002545-28002605)
chr5 (13-74)||(42718621-42718681)
chr5 (19-74)||(27263500-27263555)
chr5 (19-74)||(28394328-28394383)
chr5 (19-74)||(31171960-31172015)
chr5 (15-74)||(36954184-36954243)
chr5 (19-74)||(41875101-41875156)
chr5 (13-71)||(43369991-43370049)
chr5 (17-74)||(6226410-6226467)
chr5 (13-74)||(24007355-24007415)
chr5 (13-74)||(28766149-28766210)
chr5 (13-74)||(32904617-32904678)
chr5 (13-74)||(17210407-17210470)
chr5 (13-74)||(40543936-40543993)
chr5 (15-74)||(5025506-5025564)
chr5 (39-74)||(7649228-7649263)
chr5 (15-74)||(12659501-12659560)
chr5 (39-74)||(23270334-23270369)
chr5 (20-75)||(24836615-24836670)
chr5 (39-74)||(35627427-35627462)
chr5 (39-74)||(39955554-39955589)
chr5 (39-74)||(41860190-41860225)
chr5 (32-74)||(1134837-1134879)
chr5 (13-71)||(19514191-19514249)
chr5 (13-71)||(22702130-22702187)
chr5 (20-74)||(40493721-40493775)
chr5 (13-74)||(832028-832088)
chr5 (41-74)||(3370743-3370776)
chr5 (41-74)||(3860334-3860367)
chr5 (41-74)||(7121927-7121960)
chr5 (41-74)||(17916241-17916274)
chr5 (39-72)||(21790247-21790280)
chr5 (41-74)||(31796427-31796460)
chr5 (13-54)||(38162547-38162588)
chr5 (41-74)||(40722275-40722308)
chr5 (39-71)||(17065107-17065139)
chr5 (21-73)||(19650559-19650611)
chr5 (14-74)||(33550554-33550614)
[»] chr2 (50 HSPs)
chr2 (13-71)||(22387672-22387730)
chr2 (13-74)||(5879997-5880058)
chr2 (13-74)||(35916585-35916646)
chr2 (14-74)||(6941402-6941462)
chr2 (12-74)||(13450061-13450123)
chr2 (13-74)||(3357512-3357573)
chr2 (13-74)||(7929679-7929739)
chr2 (13-74)||(8063166-8063227)
chr2 (13-74)||(9192294-9192354)
chr2 (13-74)||(28145921-28145981)
chr2 (13-74)||(33312817-33312878)
chr2 (13-74)||(37609827-37609887)
chr2 (13-74)||(41384735-41384796)
chr2 (14-74)||(35190504-35190563)
chr2 (19-74)||(2383430-2383485)
chr2 (15-74)||(21885446-21885505)
chr2 (19-74)||(36214111-36214166)
chr2 (19-74)||(40324044-40324099)
chr2 (13-71)||(27597141-27597199)
chr2 (13-71)||(29462635-29462692)
chr2 (16-74)||(40633591-40633649)
chr2 (13-71)||(43799011-43799069)
chr2 (17-74)||(35126107-35126163)
chr2 (13-74)||(36341808-36341869)
chr2 (13-74)||(41014086-41014146)
chr2 (13-74)||(43709713-43709773)
chr2 (18-74)||(1396919-1396974)
chr2 (14-74)||(9245306-9245365)
chr2 (13-65)||(42060547-42060598)
chr2 (39-74)||(963436-963471)
chr2 (39-74)||(9415242-9415277)
chr2 (39-74)||(24100534-24100569)
chr2 (15-74)||(33676892-33676950)
chr2 (39-74)||(35156120-35156155)
chr2 (39-74)||(36802101-36802136)
chr2 (39-74)||(38702412-38702447)
chr2 (13-63)||(3357846-3357896)
chr2 (39-73)||(24004763-24004797)
chr2 (13-74)||(1110910-1110970)
chr2 (13-74)||(13837435-13837495)
chr2 (41-74)||(15248995-15249028)
chr2 (13-66)||(17372339-17372391)
chr2 (21-74)||(24005256-24005308)
chr2 (13-71)||(25915352-25915412)
chr2 (13-74)||(33454497-33454558)
chr2 (30-74)||(16536512-16536556)
chr2 (13-74)||(27912914-27912977)
chr2 (18-74)||(31593689-31593744)
chr2 (39-71)||(33134204-33134236)
chr2 (41-73)||(40633904-40633936)
[»] scaffold0143 (1 HSPs)
scaffold0143 (14-71)||(5904-5961)
[»] chr8 (49 HSPs)
chr8 (13-74)||(1759714-1759775)
chr8 (13-74)||(11352624-11352684)
chr8 (13-74)||(13469033-13469094)
chr8 (13-74)||(16822898-16822959)
chr8 (13-74)||(28969803-28969864)
chr8 (14-71)||(33480719-33480776)
chr8 (13-74)||(6165787-6165847)
chr8 (13-74)||(25722654-25722715)
chr8 (13-74)||(33099927-33099988)
chr8 (13-74)||(38804769-38804830)
chr8 (19-74)||(415518-415573)
chr8 (19-74)||(1658249-1658304)
chr8 (19-74)||(6336196-6336251)
chr8 (13-68)||(26527457-26527512)
chr8 (19-74)||(36802217-36802272)
chr8 (19-74)||(37401884-37401939)
chr8 (19-74)||(43921823-43921877)
chr8 (13-71)||(4438038-4438095)
chr8 (13-70)||(15919703-15919758)
chr8 (20-74)||(26534890-26534943)
chr8 (20-74)||(28773494-28773548)
chr8 (14-71)||(4415220-4415277)
chr8 (13-74)||(8889456-8889516)
chr8 (13-74)||(11929787-11929848)
chr8 (13-74)||(15872213-15872273)
chr8 (13-74)||(15898676-15898737)
chr8 (13-74)||(18994885-18994945)
chr8 (13-74)||(24852333-24852393)
chr8 (39-74)||(17840822-17840857)
chr8 (15-74)||(23085287-23085346)
chr8 (39-74)||(34179914-34179949)
chr8 (19-74)||(43922079-43922134)
chr8 (39-73)||(16326488-16326522)
chr8 (13-71)||(24023541-24023598)
chr8 (13-74)||(27020659-27020721)
chr8 (13-71)||(38498185-38498242)
chr8 (13-74)||(1565684-1565745)
chr8 (41-74)||(9556421-9556454)
chr8 (19-72)||(14031428-14031481)
chr8 (13-74)||(14976010-14976070)
chr8 (41-74)||(26169799-26169832)
chr8 (41-74)||(32161679-32161712)
chr8 (13-74)||(41829748-41829808)
chr8 (41-74)||(44057683-44057716)
chr8 (13-74)||(1170356-1170419)
chr8 (13-61)||(11903887-11903935)
chr8 (13-74)||(15044448-15044511)
chr8 (18-74)||(35579917-35579972)
chr8 (39-71)||(39534435-39534467)
[»] chr6 (18 HSPs)
chr6 (13-74)||(927795-927856)
chr6 (13-74)||(35219381-35219442)
chr6 (13-71)||(13083712-13083769)
chr6 (13-74)||(2485728-2485789)
chr6 (14-74)||(2441277-2441337)
chr6 (19-74)||(13846882-13846937)
chr6 (13-75)||(12342565-12342626)
chr6 (20-74)||(14965087-14965140)
chr6 (13-74)||(3834045-3834105)
chr6 (15-71)||(28548554-28548610)
chr6 (39-74)||(3103864-3103899)
chr6 (39-74)||(13698006-13698041)
chr6 (39-74)||(20730198-20730233)
chr6 (39-74)||(30233150-30233185)
chr6 (13-71)||(4997190-4997247)
chr6 (41-74)||(1190420-1190453)
chr6 (41-74)||(28188723-28188756)
chr6 (41-74)||(34491781-34491814)
[»] chr4 (66 HSPs)
chr4 (13-74)||(11064649-11064710)
chr4 (13-86)||(25987593-25987665)
chr4 (13-74)||(34857852-34857913)
chr4 (13-74)||(43317465-43317526)
chr4 (20-74)||(44469100-44469154)
chr4 (13-74)||(143608-143668)
chr4 (13-74)||(2291219-2291279)
chr4 (13-74)||(10727250-10727311)
chr4 (13-74)||(10941019-10941080)
chr4 (13-74)||(15849396-15849456)
chr4 (13-74)||(20702210-20702270)
chr4 (13-74)||(27104036-27104097)
chr4 (13-73)||(24425925-24425985)
chr4 (14-74)||(37143485-37143545)
chr4 (13-72)||(20714041-20714100)
chr4 (19-74)||(22160697-22160752)
chr4 (19-74)||(23316246-23316301)
chr4 (19-74)||(25921322-25921377)
chr4 (19-74)||(27866328-27866383)
chr4 (19-74)||(50996393-50996448)
chr4 (11-73)||(4959061-4959123)
chr4 (13-74)||(13265413-13265472)
chr4 (20-74)||(21796149-21796203)
chr4 (12-74)||(42713259-42713320)
chr4 (13-71)||(50412781-50412838)
chr4 (13-74)||(55118013-55118072)
chr4 (13-74)||(627727-627788)
chr4 (13-74)||(5498576-5498636)
chr4 (13-70)||(20964600-20964657)
chr4 (13-74)||(22852329-22852389)
chr4 (13-74)||(31135098-31135158)
chr4 (13-74)||(34658757-34658817)
chr4 (13-74)||(35518955-35519015)
chr4 (13-74)||(51400330-51400390)
chr4 (13-74)||(54162571-54162632)
chr4 (39-74)||(6385258-6385293)
chr4 (13-68)||(18417324-18417378)
chr4 (11-74)||(23432327-23432389)
chr4 (19-74)||(26054618-26054672)
chr4 (13-74)||(4589792-4589853)
chr4 (13-75)||(5190279-5190340)
chr4 (40-74)||(27551237-27551271)
chr4 (9-71)||(6788423-6788487)
chr4 (37-74)||(7059218-7059255)
chr4 (39-76)||(7067942-7067979)
chr4 (41-74)||(10670962-10670995)
chr4 (41-74)||(10884600-10884633)
chr4 (41-74)||(12214753-12214786)
chr4 (21-74)||(18705933-18705986)
chr4 (41-74)||(21020664-21020697)
chr4 (41-74)||(21463544-21463577)
chr4 (41-74)||(23019569-23019602)
chr4 (41-74)||(25438534-25438567)
chr4 (13-54)||(32547504-32547545)
chr4 (13-74)||(39670022-39670082)
chr4 (41-74)||(40314808-40314841)
chr4 (41-74)||(40324884-40324917)
chr4 (30-71)||(43491328-43491369)
chr4 (41-74)||(46343042-46343075)
chr4 (41-74)||(46576547-46576580)
chr4 (41-74)||(48182412-48182445)
chr4 (41-74)||(48508946-48508979)
chr4 (42-74)||(21954693-21954725)
chr4 (13-74)||(34409933-34409996)
chr4 (42-74)||(44469353-44469385)
chr4 (13-74)||(53451090-53451153)
[»] scaffold0005 (1 HSPs)
scaffold0005 (13-73)||(254466-254526)
[»] scaffold0263 (1 HSPs)
scaffold0263 (13-76)||(22400-22463)
[»] scaffold0106 (1 HSPs)
scaffold0106 (13-76)||(26614-26677)
[»] scaffold0197 (1 HSPs)
scaffold0197 (13-74)||(21923-21983)
[»] scaffold0071 (1 HSPs)
scaffold0071 (13-74)||(16422-16482)
[»] scaffold0035 (1 HSPs)
scaffold0035 (19-74)||(82166-82221)
[»] scaffold0031 (1 HSPs)
scaffold0031 (13-72)||(47364-47423)
[»] scaffold0583 (1 HSPs)
scaffold0583 (13-71)||(1201-1258)
[»] scaffold0123 (2 HSPs)
scaffold0123 (17-75)||(28801-28858)
scaffold0123 (13-74)||(31013-31074)
[»] scaffold0043 (1 HSPs)
scaffold0043 (13-71)||(85275-85333)
[»] scaffold0013 (1 HSPs)
scaffold0013 (13-74)||(41700-41760)
[»] scaffold0002 (1 HSPs)
scaffold0002 (13-74)||(151315-151375)
[»] scaffold0734 (1 HSPs)
scaffold0734 (39-74)||(4207-4242)
[»] scaffold0196 (1 HSPs)
scaffold0196 (39-74)||(9368-9403)
[»] scaffold0543 (1 HSPs)
scaffold0543 (13-71)||(5122-5179)
[»] scaffold0492 (1 HSPs)
scaffold0492 (13-71)||(6668-6725)
[»] scaffold0268 (1 HSPs)
scaffold0268 (13-74)||(21047-21108)
[»] scaffold0217 (1 HSPs)
scaffold0217 (13-74)||(3177-3237)
[»] scaffold0012 (1 HSPs)
scaffold0012 (41-74)||(53951-53984)


Alignment Details
Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 19371557 - 19371408
Alignment:
Q  152 aaaatatatataagatttttcgtcattgttgttacaaatcaaaaagtaacaacttggcttgaatgtgtgagtataa------atactaagaag-agagac 244  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||      | || || ||| ||||||    
T  19371557 aaaatatatataagatttttcgtcattattgttacaaatcaaaaggtaacaacttggcttgaatgtgtgagtataaacacacacacgaataagaagagac 19371458  T
Q  245 ccaattccaattgcaattacaattgttgttttgatcctttgcttctccac 294  Q
    |||||||||||| ||||||||||||||||||||||||||| || ||||||    
T  19371457 ccaattccaattccaattacaattgttgttttgatccttttctcctccac 19371408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 19371622 - 19371553
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgttttcaaaat 82  Q
    |||||||||||||||| |||||||| | |||||||||||||| ||||||||||||||||||||| |||||    
T  19371622 tatattcatatcgtgtttgttacatttgttttaatatttaaaattattcttatctatttgttttgaaaat 19371553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 27723051 - 27723112
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||| ||| |||||||| |||||||||||||||| |||||||||||||||||||    
T  27723051 tatattcatatcatgtttgttacatttattttaatatttaaatttattcttatctatttgtt 27723112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 6474933 - 6474991
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| |||||||| | |||||||||||||| ||||||||||||||||    
T  6474933 tatattcatatcgtgtttgttacatttgttttaatatttaaatttattcttatctattt 6474991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 38598706 - 38598764
Alignment:
Q  16 attcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||||| |||||||| ||||| |||||||||| |||||||||||||||||||    
T  38598706 attcatatcgtgtttgttacatttatttcaatatttaaatttattcttatctatttgtt 38598764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 7525721 - 7525661
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  7525721 tatattcatatcgtgtttgttacattt-ttttaatatttaaatttattcttatctatttgtt 7525661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 39458839 - 39458776
Alignment:
Q  11 tgtatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| ||| |||||||| | |||||||||||||| ||||| |||||||||||||    
T  39458839 tgtatattcatatcatgtttgttacatttgttttaatatttaaatttattgttatctatttgtt 39458776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 21094171 - 21094232
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| ||||| || | |||||||||||||| |||||||||||| ||||||    
T  21094171 tatattcatatcgtgtttgttatatttgttttaatatttaaatttattcttatctgtttgtt 21094232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 34729105 - 34729044
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||| ||| || ||||| | |||||||||||||| |||||||||||||||||||    
T  34729105 tatattcatatcttgtttggtacattttttttaatatttaaatttattcttatctatttgtt 34729044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 8949156 - 8949216
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgt 73  Q
    ||||||||||| |||| |||||||| | |||||||||| ||| ||||||||||||||||||    
T  8949156 tatattcatattgtgtttgttacatttgttttaatattgaaatttattcttatctatttgt 8949216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 12170445 - 12170385
Alignment:
Q  14 atattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||| || ||| |||| ||| |||||||||||||||| |||||||||||||||||||    
T  12170445 atattcatgtcatgtttgttgcatttattttaatatttaaatttattcttatctatttgtt 12170385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 5096182 - 5096237
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  5096182 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 5096237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 24052319 - 24052374
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  24052319 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 24052374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 39753261 - 39753316
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  39753261 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 39753316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 1748727 - 1748789
Alignment:
Q  13 tatattcatatcgtgtctgttacatctatttt-aatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||| |||||||||| | |||||||||||||||||    
T  1748727 tatattcatatcgtgtttgttacatttttttttaatatttaaattcattcttatctatttgtt 1748789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 2275323 - 2275265
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| |||||||| | |||||||||| ||| ||||| ||||||||||    
T  2275323 tatattcatatcgtgtttgttacatttgttttaatattaaaatttattattatctattt 2275265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 17255296 - 17255239
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| |||||||| | |||||||||||||  ||||||||||||||||    
T  17255296 tatattcatatcgtgtttgttacattt-ttttaatatttaatattattcttatctattt 17255239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 21305621 - 21305678
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| |||||||| | ||||||||||| || ||||||||||||||||    
T  21305621 tatattcatatcgtgtttgttacattt-ttttaatattttaatttattcttatctattt 21305678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 5800156 - 5800095
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||| |||||||||| ||||| || |||||||||||| ||| |||||||| ||||||||||    
T  5800156 tatatgcatatcgtgtttgttaaatttattttaatattcaaatttattcttttctatttgtt 5800095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 10040318 - 10040258
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | ||||||| |||||| ||||||| |||||||||||    
T  10040318 tatattcatatcgtgtttgttacattt-ttttaatgtttaaatttattctaatctatttgtt 10040258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 21081437 - 21081376
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||| ||||||||| |||||||| | ||| |||||||||| ||||| |||||||||||||    
T  21081437 tatatttatatcgtgtttgttacatttttttaaatatttaaatttatttttatctatttgtt 21081376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 25834434 - 25834374
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| | ||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  25834434 tatattcataccatgtttgttacattt-ttttaatatttaaatttattcttatctatttgtt 25834374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 27724891 - 27724952
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||| ||| |||||| | | |||||||||||||| |||||||||| ||||||||    
T  27724891 tatattcatatcatgtttgttacttttgttttaatatttaaatttattcttatatatttgtt 27724952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 39434842 - 39434781
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||| ||||||||||| |||||| | | |||||||||||||| |||||||||| ||||||||    
T  39434842 tatactcatatcgtgtttgttacttttgttttaatatttaaatttattcttatttatttgtt 39434781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 47901682 - 47901622
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||  | |||||||||||||  |||||||||||||||||||    
T  47901682 tatattcatatcgtgtttgttacaatt-ttttaatatttaatattattcttatctatttgtt 47901622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 27724949 - 27724993
Alignment:
Q  30 tgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||| | |||||||||||||| |||||||||||||||||||    
T  27724949 tgttacatttgttttaatatttaaatttattcttatctatttgtt 27724993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 37546562 - 37546614
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    ||||| |||| |||||||| | |||||||||||||| ||||||||||||||||    
T  37546562 catatagtgtttgttacattttttttaatatttaaatttattcttatctattt 37546614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 2750136 - 2750171
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  2750136 tattttaatatttaaatttattcttatctatttgtt 2750171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 19396925 - 19396890
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  19396925 tattttaatatttaaatttattcttatctatttgtt 19396890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 21093776 - 21093834
Alignment:
Q  15 tattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||| | |||||||||||| | |||||||| ||||||||||    
T  21093776 tattcatatcgtgtttgttacattt-ttttaatatttatatttattcttgtctatttgtt 21093834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 21766385 - 21766420
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  21766385 tattttaatatttaaatttattcttatctatttgtt 21766420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 25489746 - 25489711
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  25489746 tattttaatatttaaatttattcttatctatttgtt 25489711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 42963440 - 42963475
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  42963440 tattttaatatttaaaattattcttatctatttgtt 42963475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 7628566 - 7628513
Alignment:
Q  20 atatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||| |||||||| | ||||||||||||||  ||||||||||||||||||    
T  7628566 atatcgtgtttgttacattt-ttttaatatttaaacgtattcttatctatttgtt 7628513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 15647288 - 15647347
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| ||| |||||| | ||||||||||||||  ||| ||||||||||||||    
T  15647288 tatattcatatcgtatctattacatttgttttaatatttaaa--tatacttatctatttgtt 15647347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 19497742 - 19497688
Alignment:
Q  20 atatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||| ||||| || |||||||||||| ||| | |||||||||||||||||    
T  19497742 atatcgtgtttgttatatttattttaatattcaaattcattcttatctatttgtt 19497688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 21635267 - 21635210
Alignment:
Q  16 attcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||| | ||||| || | |||||||||||||| |||||||||||||||||||    
T  21635267 attcatatcgtatttgttatattt-ttttaatatttaaatttattcttatctatttgtt 21635210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 27241162 - 27241221
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||| |||||| ||||| || |  ||||||||||||| |||||||||||||||||||    
T  27241162 tatattcatttcgtgtttgttatattt--tttaatatttaaatttattcttatctatttgtt 27241221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 74
Target Start/End: Complemental strand, 47741351 - 47741317
Alignment:
Q  40 attttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||||||| |||||||||||||||||||    
T  47741351 attttaatatttaaatttattcttatctatttgtt 47741317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 48007059 - 48007006
Alignment:
Q  20 atatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||| ||| |||| | |||||||||||||| |||||||||||||||||||    
T  48007059 atatcgtgtttgtaacattt-ttttaatatttaaatttattcttatctatttgtt 48007006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 74
Target Start/End: Complemental strand, 48525809 - 48525775
Alignment:
Q  40 attttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||||||| |||||||||||||||||||    
T  48525809 attttaatatttaaatttattcttatctatttgtt 48525775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 7468700 - 7468667
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  7468700 ttttaatatttaaatttattcttatctatttgtt 7468667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 7775213 - 7775246
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||||||| |||||||||||||    
T  7775213 ttttaatatttaaagttatttttatctatttgtt 7775246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 9412500 - 9412467
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  9412500 ttttaatatttaaatttattcttatctatttgtt 9412467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 16849230 - 16849271
Alignment:
Q  30 tgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||| | |||||||||||||| ||||||||||||||||    
T  16849230 tgttacatttgttttaatatttaaatttattcttatctattt 16849271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 20692200 - 20692241
Alignment:
Q  32 ttacatctattttaatatttaaagttattcttatctatttgt 73  Q
    |||||| | |||||||||||||| ||||||||||||||||||    
T  20692200 ttacatttgttttaatatttaaatttattcttatctatttgt 20692241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 20697678 - 20697719
Alignment:
Q  32 ttacatctattttaatatttaaagttattcttatctatttgt 73  Q
    |||||| | |||||||||||||| ||||||||||||||||||    
T  20697678 ttacatttgttttaatatttaaatttattcttatctatttgt 20697719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 21521035 - 21521002
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  21521035 ttttaatatttaaatttattcttatctatttgtt 21521002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 27250606 - 27250573
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  27250606 ttttaatatttaaatttattcttatctatttgtt 27250573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 28451138 - 28451077
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||||| || |||||||  | | |||||||||||| |||||||||||| ||||||    
T  28451138 tatattcatatcgagtttgttacacttttcttaatatttaaatttattcttatctctttgtt 28451077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 29675083 - 29675050
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  29675083 ttttaatatttaaatttattcttatctatttgtt 29675050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 30466932 - 30466899
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  30466932 ttttaatatttaaatttattcttatctatttgtt 30466899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 41747900 - 41747960
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| ||||| || | ||| |||||||||| ||||| |||||||||||||    
T  41747900 tatattcatatcgtgtttgttagattt-tttaaatatttaaatttattattatctatttgtt 41747960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 48989921 - 48989954
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  48989921 ttttaatatttaaatttattcttatctatttgtt 48989954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 23162335 - 23162367
Alignment:
Q  39 tattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| ||||||||||||||||    
T  23162335 tattttaatatttaaatttattcttatctattt 23162367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 44522939 - 44522907
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgt 73  Q
    |||||||||||||| ||||||||||||||||||    
T  44522939 ttttaatatttaaatttattcttatctatttgt 44522907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 45001120 - 45001152
Alignment:
Q  39 tattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| ||||||||||||||||    
T  45001120 tattttaatatttaaatttattcttatctattt 45001152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 228
Target Start/End: Original strand, 50100478 - 50100597
Alignment:
Q  108 ggtcaagagtcaacttgtaattttctcaaagnnnnnnngagctcaaaatatatataagatttttcgtcattgttgttacaaatcaaaaagtaacaacttg 207  Q
    |||||||||||||||||||||||||||||||        | |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |    
T  50100478 ggtcaagagtcaacttgtaattttctcaaagaaaaaaaaa-ctcaaaatatatataagatttttcgtcattgttgttacaaattaaaaggtaacaactcg 50100576  T
Q  208 gcttgaatgtgtgagtataaa 228  Q
      |||||||||||||||||||    
T  50100577 atttgaatgtgtgagtataaa 50100597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 50098822 - 50098739
Alignment:
Q  5 tgtgtgtgtatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgttttcaaaattgaggg 88  Q
    ||||||||| ||||||||||| ||||||||||| | ||||| |||||||| ||||||||||||||||||||| |||||||||||    
T  50098822 tgtgtgtgtgtattcatatcgcgtctgttacatttgttttagtatttaaaattattcttatctatttgttttgaaaattgaggg 50098739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 18875254 - 18875315
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  18875254 tatattcatatcgtgtttgttacatttgttttaatatttaaatttattcttatctatttgtt 18875315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 22004366 - 22004305
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  22004366 tatattcatatcgtgtttgttacatttgttttaatatttaaatttattcttatctatttgtt 22004305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 22011883 - 22011822
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  22011883 tatattcatatcgtgtttgttacatttgttttaatatttaaatttattcttatctatttgtt 22011822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 52957761 - 52957821
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||    
T  52957761 tatattcatatcgtgtttgttaca-cttttttaatatttaaagttattcttatctatttgtt 52957821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 51833939 - 51833997
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||||||||| |||||    
T  51833939 tatattcatatcgtgtttgttacatttattttaatatttaaatttattcttatatattt 51833997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 18732461 - 18732400
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgttt 75  Q
    |||||||||||||||| ||||| || | |||||||||||||| ||||||||||||||||||||    
T  18732461 tatattcatatcgtgtttgttatattt-ttttaatatttaaatttattcttatctatttgttt 18732400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 9860992 - 9861052
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||||||||| |||||| ||||||||||||    
T  9860992 tatattcatatcgtgtttgttacattt-ttttaatatttaaatttattcatatctatttgtt 9861052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 15445711 - 15445771
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||| |||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  15445711 tatattcatattgtgtttgttacattt-ttttaatatttaaatttattcttatctatttgtt 15445771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 21824584 - 21824644
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| ||||| || | |||||||||||||| |||||||||||||||||||    
T  21824584 tatattcatatcgtgtttgttatattt-ttttaatatttaaatttattcttatctatttgtt 21824644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 27336470 - 27336531
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| ||||| || | |||||||||||||| | |||||||||||||||||    
T  27336470 tatattcatatcgtgtttgttatattttttttaatatttaaattcattcttatctatttgtt 27336531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 27947654 - 27947593
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||| ||||| ||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  27947654 tatatttatatcatgtttgttacattttttttaatatttaaatttattcttatctatttgtt 27947593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 42392078 - 42392139
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||||| || |||||||| |||||||||||||||| ||||||| || ||||||||    
T  42392078 tatattcatatcgcgtttgttacatttattttaatatttaaatttattctaatatatttgtt 42392139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 54767619 - 54767558
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||  | |||||||||||||  |||||||||||||||||||    
T  54767619 tatattcatatcgtgtttgttacaaattttttaatatttaattttattcttatctatttgtt 54767558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 18461470 - 18461526
Alignment:
Q  14 atattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatt 70  Q
    ||||||||||||| | |||||||| ||||||| |||||||| |||||||||||||||    
T  18461470 atattcatatcgtatttgttacatttattttattatttaaatttattcttatctatt 18461526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 18722315 - 18722367
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttat 65  Q
    |||||||||||||||| |||||||| | |||||||||||||| ||||||||||    
T  18722315 tatattcatatcgtgtttgttacatttgttttaatatttaaatttattcttat 18722367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 37431416 - 37431357
Alignment:
Q  14 atattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||||||  |||||||| | |||||||||||||| |||||||||||||||||||    
T  37431416 atattcatatcgtgcttgttacattt-ttttaatatttaaatttattcttatctatttgtt 37431357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 37980689 - 37980634
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  37980689 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 37980634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 44176682 - 44176737
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  44176682 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 44176737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 6454776 - 6454829
Alignment:
Q  20 atatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||| |||||||| |||||||||||||||| |||||||||| ||||||||    
T  6454776 atatcgtgtttgttacat-tattttaatatttaaatttattcttatatatttgtt 6454829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 17590064 - 17590006
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||| ||  |||||||||||| | |||||||||||||| ||||||||||||||||    
T  17590064 tatattcacattctgtctgttacatttgttttaatatttaaatttattcttatctattt 17590006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 19420304 - 19420357
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatct 67  Q
    |||||||||||||||| |||||||| | |||||||||||||| ||||||||||||    
T  19420304 tatattcatatcgtgtttgttacattt-ttttaatatttaaatttattcttatct 19420357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 25842244 - 25842190
Alignment:
Q  17 ttcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||  |||||||| | |||||||||||||| ||||||||||||||||    
T  25842244 ttcatatcgtgcttgttacattttttttaatatttaaatttattcttatctattt 25842190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 45644030 - 45643973
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| |||||||| | |||||||||||||| ||||| ||||||||||    
T  45644030 tatattcatatcgtgtttgttacattt-ttttaatatttaaatttatttttatctattt 45643973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 13155613 - 13155673
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| ||||| |||||||| | ||||||||||| || |||||||||||||||||||    
T  13155613 tatattcatagcgtgtttgttacattt-ttttaatatttcaaattattcttatctatttgtt 13155673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 13496046 - 13496106
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||| ||| |||||||| | |||||||||| ||| |||||||||||||||||||    
T  13496046 tatattcatatcatgtttgttacattt-ttttaatattgaaatttattcttatctatttgtt 13496106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 13875393 - 13875340
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatc 66  Q
    |||||||||||||||| |  ||||| |||||||||||||||| |||||||||||    
T  13875393 tatattcatatcgtgttttatacatttattttaatatttaaatttattcttatc 13875340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 21030743 - 21030803
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||| ||||| ||||| |||||||||||||    
T  21030743 tatattcatatcgtgtttgttacattt-ttttaatacttaaatttattgttatctatttgtt 21030803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 22177282 - 22177221
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||| |||||||||| |||||||| | ||||||||||||||  || |||||||||||||||    
T  22177282 tatatccatatcgtgtttgttacatttgttttaatatttaaatataatcttatctatttgtt 22177221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 46732059 - 46732120
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||| ||||||||| | ||| || | |||||||||||||| |||||||||||||||||||    
T  46732059 tatatttatatcgtgtttattaaatttgttttaatatttaaatttattcttatctatttgtt 46732120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 3890411 - 3890360
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttat 65  Q
    |||||||||||||||||||||| || | |||||||||||||| ||||||||||    
T  3890411 tatattcatatcgtgtctgttatat-ttttttaatatttaaatttattcttat 3890360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 26130734 - 26130686
Alignment:
Q  28 tctgttacatctattttaatatttaaagttattcttatctatttgtttt 76  Q
    |||||||||| | |||||||||||||| ||||||||| |||||||||||    
T  26130734 tctgttacatttgttttaatatttaaatttattcttacctatttgtttt 26130686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 50100622 - 50100658
Alignment:
Q  258 caattacaattgttgttttgatcctttgcttctccac 294  Q
    ||||||||||||||||||||||||||| |||||||||    
T  50100622 caattacaattgttgttttgatccttttcttctccac 50100658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 261143 - 261092
Alignment:
Q  20 atatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    ||||| ||| |||||||| | |||||||||||||| ||||||||||||||||    
T  261143 atatcatgtttgttacattttttttaatatttaaatttattcttatctattt 261092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 3807061 - 3807006
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||| |||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  3807061 catattgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 3807006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 7638781 - 7638722
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttg 72  Q
    |||||| ||||||||| ||| | || |||||||||||||||| || ||||||||||||||    
T  7638781 tatatttatatcgtgtttgtcatatttattttaatatttaaattttttcttatctatttg 7638722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 12565703 - 12565746
Alignment:
Q  30 tgttacatctattttaatatttaaagttattcttatctatttgt 73  Q
    |||||||| | |||||||||||||| ||||||||||||||||||    
T  12565703 tgttacattttttttaatatttaaaattattcttatctatttgt 12565746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 13260106 - 13260149
Alignment:
Q  30 tgttacatctattttaatatttaaagttattcttatctatttgt 73  Q
    |||||||| | |||||||||||||| ||||||||||||||||||    
T  13260106 tgttacattttttttaatatttaaaattattcttatctatttgt 13260149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 21595312 - 21595347
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  21595312 tattttaatatttaaatttattcttatctatttgtt 21595347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 27400236 - 27400271
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  27400236 tattttaatatttaaatttattcttatctatttgtt 27400271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 39851485 - 39851528
Alignment:
Q  31 gttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||| | |||||||||||||| |||||||||||||||||||    
T  39851485 gttacatttgttttaatatttaaatttattcttatctatttgtt 39851528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 3283445 - 3283504
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| |  |||||||||| || ||||| |||||||||||||    
T  3283445 tatattcatatcgtgtttgttacattt--tttaatattttaatttattattatctatttgtt 3283504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 3418704 - 3418646
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    ||||||||||  |||| ||||| || | |||||||||||||| ||||||||||||||||    
T  3418704 tatattcataatgtgtttgttatatttgttttaatatttaaatttattcttatctattt 3418646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 14030994 - 14031053
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||| |||||| | |||||||| |  ||||||||||||| |||||||||||||||||||    
T  14030994 tatattcctatcgtatttgttacattt--tttaatatttaaatttattcttatctatttgtt 14031053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 19579714 - 19579771
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||| | |||||||| | |||||||||||||| ||||| ||||||||||    
T  19579714 tatattcatatcgtatttgttacattt-ttttaatatttaaatttatttttatctattt 19579771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 19592330 - 19592388
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||| ||| ||||| || | |||||||||||||| |||||||||| |||||    
T  19592330 tatattcatatcctgtttgttatattttttttaatatttaaatttattcttatttattt 19592388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 27108883 - 27108936
Alignment:
Q  20 atatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||| |||||||| | |||||||||||||| ||||| |||||||||||||    
T  27108883 atatcgtgtttgttacattt-ttttaatatttaaatttatttttatctatttgtt 27108936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 39904106 - 39904159
Alignment:
Q  20 atatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||| |||||||| | |||||||||||||| ||||| |||||||||||||    
T  39904106 atatcgtgt-tgttacatttgttttaatatttaaatttatttttatctatttgtt 39904159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 40360230 - 40360180
Alignment:
Q  21 tatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||| ||||| || | |||||||||||||| ||||||||||||||||    
T  40360230 tatcgtgtttgttatattttttttaatatttaaatttattcttatctattt 40360180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 45702215 - 45702274
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| ||||| || |  ||||||||||||  |||||||||||||||||||    
T  45702215 tatattcatatcgtgtttgttatattt--tttaatatttaatattattcttatctatttgtt 45702274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 2454076 - 2454016
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||| || |||| |||||||| | |||||||||||||| ||||||||||| |||||||    
T  2454076 tatattcaaattgtgtttgttacattt-ttttaatatttaaatttattcttatcaatttgtt 2454016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 9861635 - 9861602
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  9861635 ttttaatatttaaatttattcttatctatttgtt 9861602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 12673262 - 12673201
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||| ||| |||||| | | |||||||||||||| | ||||||||| |||||||    
T  12673262 tatattcatatcatgtttgttacctttgttttaatatttaaattaattcttatcaatttgtt 12673201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 14899691 - 14899658
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  14899691 ttttaatatttaaatttattcttatctatttgtt 14899658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 15569648 - 15569587
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| | | |||||| | |||||||| ||||| |||||||||| ||||||||    
T  15569648 tatattcatatcgtattttttacatttgttttaatagttaaatttattcttatttatttgtt 15569587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 22525991 - 22525958
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  22525991 ttttaatatttaaatttattcttatctatttgtt 22525958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 24171219 - 24171186
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  24171219 ttttaatatttaaatttattcttatctatttgtt 24171186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 27327816 - 27327876
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| ||||| || | |||||| ||||||| |||||||||| ||||||||    
T  27327816 tatattcatatcgtgtttgttatat-ttttttaacatttaaatttattcttatttatttgtt 27327876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 27334053 - 27334113
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| ||||| || | |||||| ||||||| |||||||||| ||||||||    
T  27334053 tatattcatatcgtgtttgttatat-ttttttaacatttaaatttattcttatttatttgtt 27334113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 28039391 - 28039424
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  28039391 ttttaatatttaaatttattcttatctatttgtt 28039424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 39822799 - 39822859
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| | |||||||| | |||||||||||||| || |||||||| |||||||    
T  39822799 tatattcatatcgtatttgttacattt-ttttaatatttaaattttttcttatcgatttgtt 39822859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 45885788 - 45885755
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  45885788 ttttaatatttaaatttattcttatctatttgtt 45885755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 18196971 - 18196927
Alignment:
Q  30 tgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||| | |||||||||||||| |||||||||| ||||||||    
T  18196971 tgttacatttgttttaatatttaaatttattcttatatatttgtt 18196927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 71
Target Start/End: Complemental strand, 19559181 - 19559149
Alignment:
Q  39 tattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| ||||||||||||||||    
T  19559181 tattttaatatttaaatttattcttatctattt 19559149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 7e-18; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 17605524 - 17605589
Alignment:
Q  5 tgtgtgtgtatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||||||||||| |||||||| | |||||||||||||| ||||||||||||||||    
T  17605524 tgtgtgtgtatattcatatcgtgtttgttacat-ttttttaatatttaaatttattcttatctattt 17605589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 16143613 - 16143674
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||| ||||||||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  16143613 tatatttatatcgtgtttgttacattttttttaatatttaaatttattcttatctatttgtt 16143674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 31845018 - 31844957
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||| | |||||||||||||||| ||||||||||| |||||||    
T  31845018 tatattcatatcgtgtttgttacttttattttaatatttaaatttattcttatccatttgtt 31844957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 48419746 - 48419803
Alignment:
Q  17 ttcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||||||||||||| | |||||||||||||| ||||| |||||||||||||    
T  48419746 ttcatatcgtgtctgttacatttgttttaatatttaaatttatttttatctatttgtt 48419803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 50944827 - 50944888
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||| ||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  50944827 tatattcatatcatgtttgttacattttttttaatatttaaatttattcttatctatttgtt 50944888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 37231236 - 37231295
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| |  ||||||||||||| |||||||||||||||||||    
T  37231236 tatattcatatcgtgtttgttacattt--tttaatatttaaatttattcttatctatttgtt 37231295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 1570399 - 1570459
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| ||||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  1570399 tatattcataccgtgtttgttacattt-ttttaatatttaaatttattcttatctatttgtt 1570459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 10172277 - 10172217
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||| |||||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  10172277 tatattcatttcgtgtttgttacattt-ttttaatatttaaatttattcttatctatttgtt 10172217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 16823758 - 16823818
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | ||| |||||||||| |||||||||||||||||||    
T  16823758 tatattcatatcgtgtttgttacatttgttt-aatatttaaatttattcttatctatttgtt 16823818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 34011370 - 34011430
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| | |||||| ||||| |||||||||| |||||||||||||||||||    
T  34011370 tatattcatatcgtgtttattacatttattt-aatatttaaatttattcttatctatttgtt 34011430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 37706187 - 37706248
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||| |||| |||||||||| |||||||||  ||| |||||||||||||||||||    
T  37706187 tatattcatattgtgtttgttacatctgttttaatatcaaaatttattcttatctatttgtt 37706248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 49368191 - 49368131
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| | |||||| | |||||||||||||| |||||||||||||||||||    
T  49368191 tatattcatatcgtgtttattacattt-ttttaatatttaaatttattcttatctatttgtt 49368131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 50946376 - 50946433
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatt 70  Q
    |||||||||||| ||| |||||||| | |||||||||||||| |||||||||||||||    
T  50946376 tatattcatatcatgtttgttacatttgttttaatatttaaatttattcttatctatt 50946433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 27926167 - 27926111
Alignment:
Q  18 tcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||| |||||||| | |||||||||||||| |||||| ||||||||||||    
T  27926167 tcatatcgtgtttgttacattttttttaatatttaaatttattcctatctatttgtt 27926111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 8028351 - 8028406
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  8028351 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 8028406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 27208717 - 27208772
Alignment:
Q  16 attcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    ||||||||||||| ||||| || | |||||||||||||| ||||||||||||||||    
T  27208717 attcatatcgtgtttgttatattttttttaatatttaaatttattcttatctattt 27208772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 34969504 - 34969563
Alignment:
Q  15 tattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||  || |||||||| | |||||||||||||| |||||||||||||||||||    
T  34969504 tattcatatcaggtttgttacatttgttttaatatttaaatttattcttatctatttgtt 34969563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 46022297 - 46022238
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttg 72  Q
    ||||||| |||||||| |||||||| | ||||| |||||||| |||||||||||||||||    
T  46022297 tatattcttatcgtgtttgttacatttgttttactatttaaatttattcttatctatttg 46022238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 773333 - 773395
Alignment:
Q  13 tatattcatatcgtgtctgttacatctatttt-aatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||| ||| |||||||| | |||| |||||||||| |||||||||||||||||||    
T  773333 tatattcatatcatgtttgttacatattttttcaatatttaaatttattcttatctatttgtt 773395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 9971717 - 9971659
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    ||||||||||| |||| |||||||| |  ||||||||||||| ||||||||||||||||    
T  9971717 tatattcatattgtgtttgttacattttctttaatatttaaatttattcttatctattt 9971659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 11978098 - 11978036
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaa-tatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||| |||||||| ||||| |||||||||||||    
T  11978098 tatattcatatcgtgtttgttacattttttttaaatatttaaatttattattatctatttgtt 11978036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 45943205 - 45943151
Alignment:
Q  17 ttcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||| ||||||| |||||||| | |||||||||||||| ||||||||||||||||    
T  45943205 ttcagatcgtgtttgttacattttttttaatatttaaatttattcttatctattt 45943151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 925167 - 925227
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||| |||||| || |||||||| | |||||||||||||| |||||||||||||||||||    
T  925167 tatatttatatcgggtttgttacattt-ttttaatatttaaatttattcttatctatttgtt 925227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 2666085 - 2666028
Alignment:
Q  17 ttcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||| | | |||||||| | |||||||||||||| |||||||||||||||||||    
T  2666085 ttcatatcatatttgttacatttgttttaatatttaaatttattcttatctatttgtt 2666028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 8573929 - 8573868
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||| |||||||||  ||||||| |  ||||||||||||| |||||||||||||||||||    
T  8573929 tatatttatatcgtgttcgttacattttatttaatatttaaatttattcttatctatttgtt 8573868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 22094121 - 22094182
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||| ||||| ||| |||||||| | || ||||||||||| |||||||||||||||||||    
T  22094121 tatatttatatcatgtttgttacatttgttataatatttaaatttattcttatctatttgtt 22094182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 34747709 - 34747641
Alignment:
Q  5 tgtgtgtgtatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||| |||||||||||||||| |||||||| | ||||||||||||||  |||||||||  |||||||    
T  34747709 tgtgtgtatatattcatatcgtgtttgttacat-ttttttaatatttaaatatattcttatacatttgtt 34747641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 46273660 - 46273720
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | ||||||| |||||| |||||||||| ||||||||    
T  46273660 tatattcatatcgtgt-tgttacatttgttttaatgtttaaatttattcttatatatttgtt 46273720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 8096113 - 8096057
Alignment:
Q  18 tcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||| |||||||| | |||||||||||||| ||| | |||||||||||||    
T  8096113 tcatatcgtgtttgttacatttgttttaatatttaaatttagttttatctatttgtt 8096057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 13315352 - 13315415
Alignment:
Q  13 tatattcatatcgtgtctgttacatct--attttaatatttaaagttattcttatctatttgtt 74  Q
    |||| ||||||||||| ||||||| ||  ||||||||||||||| ||| |||||||||||||||    
T  13315352 tatactcatatcgtgtttgttacacctttattttaatatttaaatttactcttatctatttgtt 13315415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 46997172 - 46997227
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| ||||| ||   |||||||||||||| ||||||||||||||||    
T  46997172 tatattcatatcgtgtttgttatat---ttttaatatttaaatttattcttatctattt 46997227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 32589535 - 32589586
Alignment:
Q  20 atatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    ||||||||| ||||||||   |||||||||||||| ||||||||||||||||    
T  32589535 atatcgtgtttgttacattgtttttaatatttaaatttattcttatctattt 32589586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 48995599 - 48995658
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttg 72  Q
    ||||||| |||||||| |||||||| | ||||| | |||||| |||||||||||||||||    
T  48995599 tatattcttatcgtgtttgttacatttgttttactgtttaaatttattcttatctatttg 48995658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 2664884 - 2664826
Alignment:
Q  15 tattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgt 73  Q
    ||||| |||| ||| ||| |||| | |||||||||||||| ||||||||||||||||||    
T  2664884 tattcttatcttgtttgtcacatttgttttaatatttaaatttattcttatctatttgt 2664826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 11407186 - 11407136
Alignment:
Q  15 tattcatatcgtgtctgttacatctattttaatatttaaagttattcttat 65  Q
    |||| ||||||||| |||||||| | |||||||||||||| ||||||||||    
T  11407186 tatttatatcgtgtttgttacatttgttttaatatttaaatttattcttat 11407136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 14258893 - 14258954
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaata-tttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||| ||| || |||||||||||||||||||    
T  14258893 tatattcatatcgtgtttgttacat-ttttttaatatttttaatttattcttatctatttgtt 14258954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 29689342 - 29689288
Alignment:
Q  20 atatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||| ||||| || | |||||||||||||| |||||||||| ||||||||    
T  29689342 atatcgtgtttgttatattttttttaatatttaaatttattcttatatatttgtt 29689288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 33934328 - 33934386
Alignment:
Q  16 attcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||| ||| | |||||  | |||||||||||||| |||||||||||||||||||    
T  33934328 attcatatcatgtttattacaatttttttaatatttaaatttattcttatctatttgtt 33934386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 43610454 - 43610408
Alignment:
Q  14 atattcatatcgtgtctgttacatctattttaatatttaaagttatt 60  Q
    ||||||||||| ||| |||||||| |||||||||||||||| |||||    
T  43610454 atattcatatcatgtttgttacatttattttaatatttaaatttatt 43610408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 48716031 - 48716104
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgttttcaaaattgagg 87  Q
    |||||||||||| ||| |||| ||| | |||||||||||||| |||||||||  ||||||| || ||||||||||    
T  48716031 tatattcatatcatgtttgttgcattt-ttttaatatttaaatttattcttagttatttgtattgaaaattgagg 48716104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 4972515 - 4972548
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  4972515 ttttaatatttaaatttattcttatctatttgtt 4972548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 7297172 - 7297115
Alignment:
Q  17 ttcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||| |||||||| | ||||||||||||||  |||| ||||| |||||||    
T  7297172 ttcatatcgtgtttgttacatttgttttaatatttaaatatatttttatccatttgtt 7297115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 8007327 - 8007294
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  8007327 ttttaatatttaaatttattcttatctatttgtt 8007294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 14746594 - 14746651
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatt 70  Q
    |||||||||||| ||| || ||||| | |||||||||||||| ||||||| |||||||    
T  14746594 tatattcatatcatgtttgctacatttgttttaatatttaaatttattctcatctatt 14746651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 16830492 - 16830459
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  16830492 ttttaatatttaaatttattcttatctatttgtt 16830459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 17580034 - 17580067
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  17580034 ttttaatatttaaatttattcttatctatttgtt 17580067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 18149351 - 18149318
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  18149351 ttttaatatttaaatttattcttatctatttgtt 18149318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 20159902 - 20159869
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  20159902 ttttaatatttaaatttattcttatctatttgtt 20159869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 20906647 - 20906614
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  20906647 ttttaatatttaaatttattcttatctatttgtt 20906614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 21336072 - 21336011
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||| |||||| |||||  | | |||||||||||||| |||||||||| ||||||||    
T  21336072 tatattcatgtcgtgtttgttaagtttcttttaatatttaaatttattcttatatatttgtt 21336011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 25825115 - 25825174
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| ||| |||| | |||||||||||||| ||||| |||||||||||||    
T  25825115 tatattcatatcgtgtttgt-acattt-ttttaatatttaaatttattgttatctatttgtt 25825174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 27362001 - 27362034
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  27362001 ttttaatatttaaatttattcttatctatttgtt 27362034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 46625208 - 46625241
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  46625208 ttttaatatttaaatttattcttatctatttgtt 46625241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 47402961 - 47403022
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||| ||||||| ||| ||||| || | |||||||||||||| ||||| |||||||||||||    
T  47402961 tataatcatatcatgtttgttatattttttttaatatttaaatttattattatctatttgtt 47403022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 48419370 - 48419337
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  48419370 ttttaatatttaaatttattcttatctatttgtt 48419337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 49162601 - 49162540
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||| ||| ||||| || | || | ||||||||| |||||||||||||||||||    
T  49162601 tatattcatatcatgtttgttatatttgttatgatatttaaatttattcttatctatttgtt 49162540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 71
Target Start/End: Complemental strand, 15597229 - 15597197
Alignment:
Q  39 tattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| ||||||||||||||||    
T  15597229 tattttaatatttaaatttattcttatctattt 15597197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 28071777 - 28071833
Alignment:
Q  18 tcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||| ||||| || | |||||||||||||| ||||| |||||||| ||||    
T  28071777 tcatatcgtgtttgttatattttttttaatatttaaatttatttttatctatctgtt 28071833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 40808930 - 40808962
Alignment:
Q  39 tattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| ||||||||||||||||    
T  40808930 tattttaatatttaaatttattcttatctattt 40808962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 48455173 - 48455141
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgt 73  Q
    |||||||||||||| ||||||||||||||||||    
T  48455173 ttttaatatttaaatttattcttatctatttgt 48455141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1578 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1578
Description:

Target: scaffold1578; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 1467 - 1406
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  1467 tatattcatatcgtgtttgttacatttcttttaatatttaaatttattcttatctatttgtt 1406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 28868447 - 28868507
Alignment:
Q  14 atattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||||| | |||||||| |||||||||||||||| |||||||||||||||||||    
T  28868447 atattcatatcgtatttgttacatttattttaatatttaaatttattcttatctatttgtt 28868507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 6061894 - 6061837
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatt 70  Q
    |||||||||||||||| |||||||| | |||||||||||||| |||||||||||||||    
T  6061894 tatattcatatcgtgtttgttacatttgttttaatatttaaatttattcttatctatt 6061837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 7464257 - 7464318
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||| ||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  7464257 tatattcatatcatgtttgttacatttgttttaatatttaaatttattcttatctatttgtt 7464318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 9523816 - 9523755
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtttt 76  Q
    |||||||||||||||| |||||||| |  ||||||||||||| |||||||||||||||||||||    
T  9523816 tatattcatatcgtgtttgttacattt--tttaatatttaaatttattcttatctatttgtttt 9523755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 25524553 - 25524495
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| |||||||| | ||||||||| |||| ||||||||||||||||    
T  25524553 tatattcatatcgtgtttgttacattttttttaatatataaatttattcttatctattt 25524495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 36267031 - 36266969
Alignment:
Q  13 tatattcatatcgtgtctgttacatct-attttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||||||||  ||||||| | ||||||||||||||| |||||||||||||||||||    
T  36267031 tatattcatatcgtgttcgttacatttgattttaatatttaaatttattcttatctatttgtt 36266969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 19288966 - 19289027
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||| ||| ||||| || | |||||||||||||| |||||||||||||||||||    
T  19288966 tatattcatatcatgtttgttagatttgttttaatatttaaatttattcttatctatttgtt 19289027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 28002605 - 28002545
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||||||||| ||||||||| |||||||||    
T  28002605 tatattcatatcgtgtttgttacattt-ttttaatatttaaatttattcttacctatttgtt 28002545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 42718681 - 42718621
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| | ||||||| || |||||||||||||| |||||||||||||||||||    
T  42718681 tatattcatatcgtttttgttaca-cttttttaatatttaaatttattcttatctatttgtt 42718621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 27263500 - 27263555
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  27263500 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 27263555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 28394328 - 28394383
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  28394328 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 28394383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 31171960 - 31172015
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  31171960 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 31172015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 36954184 - 36954243
Alignment:
Q  15 tattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||| || ||||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  36954184 tattcttaacgtgtttgttacattttttttaatatttaaatttattcttatctatttgtt 36954243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 41875101 - 41875156
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  41875101 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 41875156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 43370049 - 43369991
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||| ||| ||||| || | |||||||||||||| ||||||||||||||||    
T  43370049 tatattcatatcatgtttgttatattttttttaatatttaaatttattcttatctattt 43369991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 6226410 - 6226467
Alignment:
Q  17 ttcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||| ||| |||||||| | |||||||||||||| |||||||| ||||||||||    
T  6226410 ttcatatcatgtttgttacattttttttaatatttaaatttattcttgtctatttgtt 6226467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 24007415 - 24007355
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||| | |||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  24007415 tatattcatttggtgtttgttacattt-ttttaatatttaaatttattcttatctatttgtt 24007355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 28766210 - 28766149
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||| ||||||| ||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  28766210 tatactcatatcatgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 28766149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 32904617 - 32904678
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||    |||||||||||||| |||||||||| ||||||||    
T  32904617 tatattcatatcgtgtttgttacaatagttttaatatttaaatttattcttatttatttgtt 32904678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 17210470 - 17210407
Alignment:
Q  13 tatattcatatcgtgtctgttacatctatttta--atatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||  ||||||||| |||| ||||||||||||||    
T  17210470 tatattcatatcgtgtttgttacattttttttataatatttaaatttatacttatctatttgtt 17210407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 40543936 - 40543993
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||    |||||||||||||||| |||||||||| ||||||||    
T  40543936 tatattcatatcgtgtttgtta----tattttaatatttaaatttattcttatatatttgtt 40543993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 5025564 - 5025506
Alignment:
Q  15 tattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||| |||||||| |||||||| | ||| |||||||||| |||||||||||||||||||    
T  5025564 tattcttatcgtgtttgttacattt-tttaaatatttaaatttattcttatctatttgtt 5025506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 7649228 - 7649263
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  7649228 tattttaatatttaaatttattcttatctatttgtt 7649263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 12659501 - 12659560
Alignment:
Q  15 tattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| | | |||||||| | |||||||||||||| |||| ||||||||||||||    
T  12659501 tattcatatcatatttgttacatttgttttaatatttaaatttatccttatctatttgtt 12659560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 23270369 - 23270334
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  23270369 tattttaatatttaaatttattcttatctatttgtt 23270334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 24836670 - 24836615
Alignment:
Q  20 atatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgttt 75  Q
    ||||| ||| |||||||| | |||||||||||||| ||||||||||||| ||||||    
T  24836670 atatcatgtttgttacatttgttttaatatttaaatttattcttatctagttgttt 24836615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 35627427 - 35627462
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  35627427 tattttaatatttaaatttattcttatctatttgtt 35627462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 39955589 - 39955554
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  39955589 tattttaatatttaaaattattcttatctatttgtt 39955554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 41860225 - 41860190
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  41860225 tattttaatatttaaatttattcttatctatttgtt 41860190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 1134837 - 1134879
Alignment:
Q  32 ttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||| | |||||||||||||| |||||||||||||||||||    
T  1134837 ttacatatgttttaatatttaaatttattcttatctatttgtt 1134879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 19514191 - 19514249
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    ||||||| |||||||| |||||||| | ||||  |||||||| ||||||||||||||||    
T  19514191 tatattcttatcgtgtttgttacatttgttttgctatttaaatttattcttatctattt 19514249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 22702187 - 22702130
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| ||||| |  | |||||||||||||| ||||||||||||||||    
T  22702187 tatattcatatcgtgtttgttataatt-ttttaatatttaaatttattcttatctattt 22702130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 40493775 - 40493721
Alignment:
Q  20 atatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||| | |||||| | |||||||||||||| ||||||||| |||||||||    
T  40493775 atatcgtgttttttacatttgttttaatatttaaatttattcttacctatttgtt 40493721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 832088 - 832028
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||  ||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  832088 tatattcatataatgtttgttacattt-ttttaatatttaaatttattcttatttatttgtt 832028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 3370743 - 3370776
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  3370743 ttttaatatttaaatttattcttatctatttgtt 3370776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 3860334 - 3860367
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  3860334 ttttaatatttaaatttattcttatctatttgtt 3860367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 7121960 - 7121927
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  7121960 ttttaatatttaaatttattcttatctatttgtt 7121927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 17916241 - 17916274
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  17916241 ttttaatatttaaatttattcttatctatttgtt 17916274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 72
Target Start/End: Complemental strand, 21790280 - 21790247
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttg 72  Q
    |||||||||||||||| |||||||||||||||||    
T  21790280 tattttaatatttaaatttattcttatctatttg 21790247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 31796427 - 31796460
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  31796427 ttttaatatttaaatttattcttatctatttgtt 31796460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 38162547 - 38162588
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaa 54  Q
    |||||||||||||||| |||||||| | ||||||||||||||    
T  38162547 tatattcatatcgtgtttgttacatttgttttaatatttaaa 38162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 40722308 - 40722275
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  40722308 ttttaatatttaaatttattcttatctatttgtt 40722275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 17065107 - 17065139
Alignment:
Q  39 tattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| ||||||||||||||||    
T  17065107 tattttaatatttaaatttattcttatctattt 17065139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 19650611 - 19650559
Alignment:
Q  21 tatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgt 73  Q
    |||||| | |||||||| | |||||||||||||| |||||||||||| |||||    
T  19650611 tatcgtatttgttacattttttttaatatttaaatttattcttatctttttgt 19650559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 33550554 - 33550614
Alignment:
Q  14 atattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||| |||  ||||||| | |||| ||||||||| |||||||||| ||||||||    
T  33550554 atattcatatcatgttggttacatttgttttgatatttaaatttattcttatttatttgtt 33550614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 22387730 - 22387672
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| |||||||| | |||||||||||||| ||||||||||||||||    
T  22387730 tatattcatatcgtgtttgttacattttttttaatatttaaatttattcttatctattt 22387672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 5880058 - 5879997
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||| ||||||||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  5880058 tatattaatatcgtgtttgttacattttttttaatatttaaatttattcttatctatttgtt 5879997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 35916646 - 35916585
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||||||||| ||||| |||||||||||||    
T  35916646 tatattcatatcgtgtttgttacatttgttttaatatttaaatttattattatctatttgtt 35916585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 6941462 - 6941402
Alignment:
Q  14 atattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||| ||||||| | |||||||| |||||||||||||||| |||||||||||||||||||    
T  6941462 atatttatatcgtatttgttacatttattttaatatttaaatttattcttatctatttgtt 6941402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 13450123 - 13450061
Alignment:
Q  12 gtatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||||||||| |||||||| | |||||||||| ||| ||||||||||||| |||||    
T  13450123 gtatattcatatcgtgtttgttacatttgttttaatattcaaatttattcttatctaattgtt 13450061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 3357512 - 3357573
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| ||||| |||||||| | |||||||||||||| |||||||| ||||||||||    
T  3357512 tatattcataacgtgtttgttacatttgttttaatatttaaatttattcttctctatttgtt 3357573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 7929679 - 7929739
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||||||||| ||||| |||||||||||||    
T  7929679 tatattcatatcgtgtttgttacattt-ttttaatatttaaatttattattatctatttgtt 7929739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 8063166 - 8063227
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||||| ||| ||||| |||||||||||||    
T  8063166 tatattcatatcgtgtttgttacatttgttttaatattaaaatttatttttatctatttgtt 8063227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 9192294 - 9192354
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||| ||||||||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  9192294 tatattaatatcgtgtttgttacattt-ttttaatatttaaatttattcttatctatttgtt 9192354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 28145981 - 28145921
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | ||||| |||||||| |||||||||||||||||||    
T  28145981 tatattcatatcgtgtttgttacattt-ttttagtatttaaatttattcttatctatttgtt 28145921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 33312878 - 33312817
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||| ||| |||||||| | ||||||||||||||  ||||||||||||||||||    
T  33312878 tatattcatatcatgtttgttacatttgttttaatatttaaatgtattcttatctatttgtt 33312817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 37609887 - 37609827
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| ||||| || | |||||||||||||| |||||||||||||||||||    
T  37609887 tatattcatatcgtgtttgttatattt-ttttaatatttaaatttattcttatctatttgtt 37609827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 41384735 - 41384796
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| ||||| ||||| || | |||||||||||||| |||||||||||||||||||    
T  41384735 tatattcataccgtgtttgttatattttttttaatatttaaatttattcttatctatttgtt 41384796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 35190504 - 35190563
Alignment:
Q  14 atattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  35190504 atattcatatcgtgtttgttacattt-ttttaatatttaaatttattcttatttatttgtt 35190563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 2383485 - 2383430
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  2383485 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 2383430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 21885446 - 21885505
Alignment:
Q  15 tattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| ||||| || | ||||||||||||||||||||||||| | ||||||    
T  21885446 tattcatatcgtgtttgttatattttttttaatatttaaagttattcttatatgtttgtt 21885505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 36214166 - 36214111
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  36214166 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 36214111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 40324044 - 40324099
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  40324044 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 40324099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 27597199 - 27597141
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||| ||| ||||| || | |||||||||||||| ||||||||||||||||    
T  27597199 tatattcatatcatgtttgttatattttttttaatatttaaatttattcttatctattt 27597141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 29462692 - 29462635
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||| ||||| |||||||| | |||||||||||||| ||||||||||||||||    
T  29462692 tatattcataccgtgtttgttacattt-ttttaatatttaaatttattcttatctattt 29462635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 40633591 - 40633649
Alignment:
Q  16 attcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||||| ||||| || | ||| |||||||||| |||||||||||||||||||    
T  40633591 attcatatcgtgtttgttatatttgtttaaatatttaaatttattcttatctatttgtt 40633649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 43799069 - 43799011
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    ||||||||||| |||| |||||||| | |||||||||||||| ||||| ||||||||||    
T  43799069 tatattcatattgtgtttgttacattttttttaatatttaaatttatttttatctattt 43799011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 35126107 - 35126163
Alignment:
Q  17 ttcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||| |||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  35126107 ttcatattgtgtttgttacattt-ttttaatatttaaatttattcttatctatttgtt 35126163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 36341808 - 36341869
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||| |||| |||||||| | || ||||||||||| |||||||||| ||||||||    
T  36341808 tatattcatatagtgtttgttacattttttgtaatatttaaatttattcttatttatttgtt 36341869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 41014146 - 41014086
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||  | |||||||| | |||||||||||||| |||||||||||||||||||    
T  41014146 tatattcatatcgaatttgttacattt-ttttaatatttaaatttattcttatctatttgtt 41014086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 43709713 - 43709773
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| | |||||| | |||||||||||||| |||||||||||| ||||||    
T  43709713 tatattcatatcgtgttttttacattt-ttttaatatttaaatttattcttatctttttgtt 43709773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 1396974 - 1396919
Alignment:
Q  18 tcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||| |||| ||| | |||||||||||||| |||||||||||||||||||    
T  1396974 tcatatcgtgtttgtttcattt-ttttaatatttaaatttattcttatctatttgtt 1396919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 9245306 - 9245365
Alignment:
Q  14 atattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| || |||||||||| | | |||||||||||| |||||||||||||||||||    
T  9245306 atattcatattgtttctgttacattt-tcttaatatttaaatttattcttatctatttgtt 9245365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 42060547 - 42060598
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttat 65  Q
    |||||||||||||||||||||| || | |||||||||||||| ||||||||||    
T  42060547 tatattcatatcgtgtctgttatat-ttttttaatatttaaatttattcttat 42060598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 963436 - 963471
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  963436 tattttaatatttaaatttattcttatctatttgtt 963471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 9415242 - 9415277
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  9415242 tattttaatatttaaatttattcttatctatttgtt 9415277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 24100569 - 24100534
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  24100569 tattttaatatttaaatttattcttatctatttgtt 24100534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 33676892 - 33676950
Alignment:
Q  15 tattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||| |||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  33676892 tattcttatcgtgtttgttacattt-ttttaatatttaaatttattcttatatatttgtt 33676950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 35156155 - 35156120
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  35156155 tattttaatatttaaatttattcttatctatttgtt 35156120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 36802136 - 36802101
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  36802136 tattttaatatttaaatttattcttatctatttgtt 36802101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 38702412 - 38702447
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  38702412 tattttaatatttaaatttattcttatctatttgtt 38702447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 3357846 - 3357896
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattctt 63  Q
    ||||||| |||||||| |||||||| | |||||||||||||| ||||||||    
T  3357846 tatattcttatcgtgtttgttacatttgttttaatatttaaatttattctt 3357896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 73
Target Start/End: Original strand, 24004763 - 24004797
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgt 73  Q
    |||||||||||||||| ||||||||||||||||||    
T  24004763 tattttaatatttaaatttattcttatctatttgt 24004797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 1110970 - 1110910
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||| ||||||||| ||||| || | |||||||||||||| |||||||||| ||||||||    
T  1110970 tatatttatatcgtgtttgttatattt-ttttaatatttaaatttattcttatatatttgtt 1110910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 13837435 - 13837495
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | | |||||||| ||| ||||| |||||||||||||    
T  13837435 tatattcatatcgtgtttgttacat-tttcttaatattgaaatttatttttatctatttgtt 13837495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 15249028 - 15248995
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  15249028 ttttaatatttaaatttattcttatctatttgtt 15248995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 17372391 - 17372339
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatc 66  Q
    |||||||||||| ||| |||||||| | |||||||||||||| |||||||||||    
T  17372391 tatattcatatcatgtttgttacattt-ttttaatatttaaatttattcttatc 17372339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 24005256 - 24005308
Alignment:
Q  21 tatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||| |||||||| | |||||||||||||| ||||| |||||||||||||    
T  24005256 tatcgtgtttgttacattt-ttttaatatttaaatttatttttatctatttgtt 24005308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 25915352 - 25915412
Alignment:
Q  13 tatattcatatcgtgtctgttaca--tctattttaatatttaaagttattcttatctattt 71  Q
    |||| ||||||||||| |||||||  | ||||||||||||| || ||||||||||||||||    
T  25915352 tatactcatatcgtgtttgttacacttttattttaatatttgaatttattcttatctattt 25915412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 33454558 - 33454497
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| | |||||  | | |||||||||||||| | |||||||||||||||||    
T  33454558 tatattcatatcgtatttgttatttttgttttaatatttaaattcattcttatctatttgtt 33454497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 16536512 - 16536556
Alignment:
Q  30 tgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||| | |||||||||||||| ||||| |||||||||||||    
T  16536512 tgttacatttgttttaatatttaaatttatttttatctatttgtt 16536556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 27912977 - 27912914
Alignment:
Q  13 tatattcatatcgtgtctgttaca--tctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||| ||||||||||| |||||||  | ||||||||||||| || ||| |||||||||||||||    
T  27912977 tatactcatatcgtgtttgttacacttttattttaatatttgaatttactcttatctatttgtt 27912914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 31593689 - 31593744
Alignment:
Q  18 tcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||| ||| |||||||| | |||| ||||||||| |||||||||||||||||||    
T  31593689 tcatatcatgtttgttacattt-ttttcatatttaaatttattcttatctatttgtt 31593744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 33134204 - 33134236
Alignment:
Q  39 tattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| ||||||||||||||||    
T  33134204 tattttaatatttaaatttattcttatctattt 33134236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 40633904 - 40633936
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgt 73  Q
    |||||||||||||| ||||||||||||||||||    
T  40633904 ttttaatatttaaatttattcttatctatttgt 40633936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 5904 - 5961
Alignment:
Q  14 atattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||| |||||| |||||||| |||||||||||||||| ||||||||||||||||    
T  5904 atattcatgtcgtgtttgttacatttattttaatatttaaatttattcttatctattt 5961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 1759714 - 1759775
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||| ||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  1759714 tatattcatatcttgtttgttacatttgttttaatatttaaatttattcttatctatttgtt 1759775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 11352684 - 11352624
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  11352684 tatattcatatcgtgtttgttacattt-ttttaatatttaaatttattcttatctatttgtt 11352624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 13469094 - 13469033
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||||||||| ||||| |||||||||||||    
T  13469094 tatattcatatcgtgtttgttacatttgttttaatatttaaatttatttttatctatttgtt 13469033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 16822898 - 16822959
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||| ||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  16822898 tatattcatatcttgtttgttacatttgttttaatatttaaatttattcttatctatttgtt 16822959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 28969803 - 28969864
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||| ||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  28969803 tatattcatatcttgtttgttacatttgttttaatatttaaacttattcttatctatttgtt 28969864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 33480776 - 33480719
Alignment:
Q  14 atattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||| |||||| |||||||| |||||||||||||||| ||||||||||||||||    
T  33480776 atattcatgtcgtgtttgttacatttattttaatatttaaatttattcttatctattt 33480719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 6165847 - 6165787
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | ||||||||||||| ||||||| ||||||||||||    
T  6165847 tatattcatatcgtgtttgttacattt-ttttaatatttaatgttattcgtatctatttgtt 6165787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 25722715 - 25722654
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||| ||||||||| |||||||| | ||||| |||||||| |||||||||||||||||||    
T  25722715 tatatttatatcgtgtttgttacatttgttttagtatttaaatttattcttatctatttgtt 25722654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 33099927 - 33099988
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||| ||||||||| |||||||| | |||||||||||||| |||| ||||||||||||||    
T  33099927 tatatttatatcgtgtttgttacattttttttaatatttaaatttatacttatctatttgtt 33099988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 38804769 - 38804830
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||||||||| |||||||||| | ||||||    
T  38804769 tatattcatatcgtgtttgttacatttgttttaatatttaaatttattcttatttgtttgtt 38804830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 415573 - 415518
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  415573 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 415518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 1658304 - 1658249
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  1658304 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 1658249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 6336251 - 6336196
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  6336251 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 6336196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 26527457 - 26527512
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatcta 68  Q
    |||||| ||||||||| |||||||| ||||||||| |||||| |||||||||||||    
T  26527457 tatatttatatcgtgtttgttacatttattttaatgtttaaatttattcttatcta 26527512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 36802272 - 36802217
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  36802272 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 36802217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 37401884 - 37401939
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  37401884 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 37401939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 43921877 - 43921823
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  43921877 catatcgtgtttgttacattt-ttttaatatttaaaattattcttatctatttgtt 43921823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 4438038 - 4438095
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||| ||| |||||||| | |||||||||||||| ||||||||||||||||    
T  4438038 tatattcatatcatgtttgttacattt-ttttaatatttaaatttattcttatctattt 4438095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 15919703 - 15919758
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatt 70  Q
    |||||||||||||||| |||||||| |  ||||||||||||| |||||||||||||||    
T  15919703 tatattcatatcgtgtttgttacattt--tttaatatttaaatttattcttatctatt 15919758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 26534890 - 26534943
Alignment:
Q  20 atatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  26534890 atatcgtgtttgttacattt-ttttaatatttaaatttattcttatctatttgtt 26534943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 28773548 - 28773494
Alignment:
Q  20 atatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  28773548 atatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 28773494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 4415220 - 4415277
Alignment:
Q  14 atattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    ||||||||||||||| ||||| || | |||||||||||||| ||||| ||||||||||    
T  4415220 atattcatatcgtgtttgttatatttgttttaatatttaaatttatttttatctattt 4415277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 8889516 - 8889456
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| | |||||| | |||||||||||||| || ||||||||||||||||    
T  8889516 tatattcatatcgtgtttattacattt-ttttaatatttaaaattgttcttatctatttgtt 8889456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 11929787 - 11929848
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||| ||||||||||| |||||| | ||||||||||||| || ||| |||||||||||||||    
T  11929787 tatactcatatcgtgtttgttacttttattttaatatttgaatttactcttatctatttgtt 11929848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 15872213 - 15872273
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| | |||||||| | |||||||||||||| ||||||||||| |||||||    
T  15872213 tatattcatatcgtatttgttacattt-ttttaatatttaaatttattcttatcaatttgtt 15872273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 15898737 - 15898676
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||  |||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  15898737 tatattcatactgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 15898676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 18994885 - 18994945
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | | |||||||||||| ||||||||||||| |||||    
T  18994885 tatattcatatcgtgtttgttacattt-tattaatatttaaatttattcttatctacttgtt 18994945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 24852393 - 24852333
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||  |||||||| | |||||||||||||| ||||| |||||||||||||    
T  24852393 tatattcatatcgtggttgttacattt-ttttaatatttaaatttatttttatctatttgtt 24852333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 17840857 - 17840822
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  17840857 tattttaatatttaaatttattcttatctatttgtt 17840822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 23085346 - 23085287
Alignment:
Q  15 tattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||| |||||||| |||||||| | |||||||||||||| || ||||||| ||||||||    
T  23085346 tattcttatcgtgtttgttacattttttttaatatttaaattttttcttatttatttgtt 23085287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 34179949 - 34179914
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  34179949 tattttaatatttaaatttattcttatctatttgtt 34179914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 43922134 - 43922079
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||| ||| |||||||| | |||||||||||||| |||||||| ||||||||||    
T  43922134 catatcatgtttgttacattttttttaatatttaaatttattcttgtctatttgtt 43922079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 16326522 - 16326488
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgt 73  Q
    |||||||||||||||| ||||||||||||||||||    
T  16326522 tattttaatatttaaatttattcttatctatttgt 16326488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 24023541 - 24023598
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||| ||||||||| |||||||| | |||||||||||||| ||||||||||| ||||    
T  24023541 tatatttatatcgtgtttgttacattt-ttttaatatttaaatttattcttatcaattt 24023598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 27020659 - 27020721
Alignment:
Q  13 tatattcatatcgtgtctgttacatctatttt-aatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| | |||||| | |||| |||||||||| |||| ||||||||||||||    
T  27020659 tatattcatatcgtgtttattacatttttttttaatatttaaatttatacttatctatttgtt 27020721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 38498242 - 38498185
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||| ||||| ||| |||||||| | |||||||||||||| ||||||||||||||||    
T  38498242 tatatttatatcatgtttgttacattt-ttttaatatttaaatttattcttatctattt 38498185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 1565745 - 1565684
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||| |||| |||||||| | |||||||||| ||| ||||| |||| ||||||||    
T  1565745 tatattcatattgtgtttgttacatttgttttaatattaaaatttatttttatttatttgtt 1565684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 9556421 - 9556454
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  9556421 ttttaatatttaaatttattcttatctatttgtt 9556454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 14031428 - 14031481
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttg 72  Q
    |||||| ||| |||||||| | |||||||||||||| |||||||||| ||||||    
T  14031428 catatcatgtttgttacatttgttttaatatttaaatttattcttatttatttg 14031481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 14976010 - 14976070
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| ||||| || | |||||||||||||| ||||||||||  |||||||    
T  14976010 tatattcatatcgtgtttgttatattt-ttttaatatttaaatttattcttattcatttgtt 14976070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 26169832 - 26169799
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  26169832 ttttaatatttaaatttattcttatctatttgtt 26169799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 32161712 - 32161679
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  32161712 ttttaatatttaaatttattcttatctatttgtt 32161679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 41829808 - 41829748
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||| |||| |||| |||||||| | ||||| |||||||| |||||||||||||||||||    
T  41829808 tatatttatattgtgtttgttacatttttttta-tatttaaatttattcttatctatttgtt 41829748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 44057683 - 44057716
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  44057683 ttttaatatttaaatttattcttatctatttgtt 44057716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 1170419 - 1170356
Alignment:
Q  13 tatattcatatcgtgtctgttacatcta--ttttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||| |||||||| |||||||| |   |||||||||||||| |||||||||||| ||||||    
T  1170419 tatattcttatcgtgtttgttacattttatttttaatatttaaatttattcttatctgtttgtt 1170356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 11903935 - 11903887
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattc 61  Q
    |||||||||||| ||| |||||||| | |||||||||||||| ||||||    
T  11903935 tatattcatatcatgtttgttacatttgttttaatatttaaatttattc 11903887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 15044448 - 15044511
Alignment:
Q  13 tatattcatatcgtgtctgttacatct--attttaatatttaaagttattcttatctatttgtt 74  Q
    |||| ||||||||||| |||||||| |  |||||||||||| || ||| |||||||||||||||    
T  15044448 tatactcatatcgtgtttgttacatttttattttaatatttgaatttaatcttatctatttgtt 15044511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 35579917 - 35579972
Alignment:
Q  18 tcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||| ||||| || | ||||||| |||||| |||||||||||||||||||    
T  35579917 tcatatcgtgtttgttatattt-ttttaatttttaaatttattcttatctatttgtt 35579972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 39534435 - 39534467
Alignment:
Q  39 tattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| ||||||||||||||||    
T  39534435 tattttaatatttaaatttattcttatctattt 39534467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 927856 - 927795
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| ||||| || ||||||||||| |||| |||||||||||||||||||    
T  927856 tatattcatatcgtgtttgttatatttattttaatatataaatttattcttatctatttgtt 927795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 35219381 - 35219442
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| ||||||||   |||||||||||||| |||||||||||||||||||    
T  35219381 tatattcatatcgtgtttgttacattggttttaatatttaaatttattcttatctatttgtt 35219442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 13083712 - 13083769
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| |||||||| | |||||||||||||| ||||||||||||||||    
T  13083712 tatattcatatcgtgtttgttacattt-ttttaatatttaaatttattcttatctattt 13083769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 2485789 - 2485728
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||| ||| |||||||| | |||||||||||||| ||||||||||||| |||||    
T  2485789 tatattcatatcatgtttgttacatgtgttttaatatttaaatttattcttatctaattgtt 2485728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 2441337 - 2441277
Alignment:
Q  14 atattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||| ||| |||||||| | |||||||||||||| ||||| |||||||||||||    
T  2441337 atattcatatcatgtttgttacatttgttttaatatttaaatttattattatctatttgtt 2441277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 13846937 - 13846882
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  13846937 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 13846882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 12342565 - 12342626
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgttt 75  Q
    |||||||||||||||| |||||||  | ||||| |||||||| ||||||||||||||||||||    
T  12342565 tatattcatatcgtgtttgttacaatt-ttttattatttaaatttattcttatctatttgttt 12342626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 14965140 - 14965087
Alignment:
Q  20 atatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  14965140 atatcgtgtttgttacattt-ttttaatatttaaatttattcttatctatttgtt 14965087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 3834045 - 3834105
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||||||||  | ||||| | |||||||||||||| |||||||||||||||||||    
T  3834045 tatattcatatcgtgttggatacattt-ttttaatatttaaatttattcttatctatttgtt 3834105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 28548610 - 28548554
Alignment:
Q  15 tattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    ||||| |||||||| |||||||| | |||||||||||||  ||||||||||||||||    
T  28548610 tattcttatcgtgtttgttacatttgttttaatatttaagtttattcttatctattt 28548554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 3103864 - 3103899
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  3103864 tattttaatatttaaatttattcttatctatttgtt 3103899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 13698041 - 13698006
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  13698041 tattttaatatttaaatttattcttatctatttgtt 13698006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 20730233 - 20730198
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  20730233 tattttaatatttaaatttattcttatctatttgtt 20730198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 30233185 - 30233150
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  30233185 tattttaatatttaaatttattcttatctatttgtt 30233150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 4997190 - 4997247
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||| | || ||||| | |||||||||||||| ||||||||||||||||    
T  4997190 tatattcatatcgtatttgctacattt-ttttaatatttaaatttattcttatctattt 4997247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 1190453 - 1190420
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  1190453 ttttaatatttaaatttattcttatctatttgtt 1190420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 28188723 - 28188756
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  28188723 ttttaatatttaaatttattcttatctatttgtt 28188756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 34491781 - 34491814
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  34491781 ttttaatatttaaatttattcttatctatttgtt 34491814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 11064649 - 11064710
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||| ||||| |||||||||||||||||||    
T  11064649 tatattcatatcgtgtttgttacatttgttttaatacttaaatttattcttatctatttgtt 11064710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 25987665 - 25987593
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgttttcaaaattgag 86  Q
    |||||||||||||||| |||||||| | |||||| ||||||| |||||||||||||||||| || |||||||||    
T  25987665 tatattcatatcgtgtttgttacattt-ttttaacatttaaatttattcttatctatttgtattgaaaattgag 25987593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 34857913 - 34857852
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||| ||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  34857913 tatattcatatcttgtttgttacatttgttttaatatttaaacttattcttatctatttgtt 34857852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 43317526 - 43317465
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||| | | |||||||||||||| |||||||||||||||||||    
T  43317526 tatattcatatcgtgtttgttacttttgttttaatatttaaatttattcttatctatttgtt 43317465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 44469100 - 44469154
Alignment:
Q  20 atatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||| |||||||| |||||||||||||||| |||||||||||| ||||||    
T  44469100 atatcgtgtttgttacatttattttaatatttaaatttattcttatctgtttgtt 44469154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 143608 - 143668
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| ||||| || | |||||||||||||| |||||||||||||||||||    
T  143608 tatattcatatcgtgtttgttatattt-ttttaatatttaaatttattcttatctatttgtt 143668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 2291219 - 2291279
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||| ||||||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  2291219 tatattcaaatcgtgtttgttacattt-ttttaatatttaaatttattcttatctatttgtt 2291279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 10727311 - 10727250
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||||||||| ||| |||||| ||||||||    
T  10727311 tatattcatatcgtgtttgttacatttgttttaatatttaaatttactcttatatatttgtt 10727250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 10941080 - 10941019
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||||||||| ||| |||||| ||||||||    
T  10941080 tatattcatatcgtgtttgttacatttgttttaatatttaaatttactcttatatatttgtt 10941019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 15849456 - 15849396
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||||||||| |||| ||||||||||||||    
T  15849456 tatattcatatcgtgtttgttacattt-ttttaatatttaaatttatacttatctatttgtt 15849396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 20702270 - 20702210
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||| |||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  20702270 tatattcatattgtgtttgttacattt-ttttaatatttaaatttattcttatctatttgtt 20702210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 27104036 - 27104097
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||| ||| |||||||| | |||||||||||||| ||||||||||||| |||||    
T  27104036 tatattcatatcatgtttgttacatttgttttaatatttaaatttattcttatctaattgtt 27104097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 24425985 - 24425925
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgt 73  Q
    |||| ||||||||||| |||||||| | |||||||||||||| |||||||||| |||||||    
T  24425985 tatactcatatcgtgtttgttacatattttttaatatttaaatttattcttatttatttgt 24425925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 37143485 - 37143545
Alignment:
Q  14 atattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||||||| | |||| | | |||||||||||||| |||||||||||||||||||    
T  37143485 atattcatatcgtgtttattacctttgttttaatatttaaatttattcttatctatttgtt 37143545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 20714041 - 20714100
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttg 72  Q
    |||||||||||| ||| |||||||| |  ||||||||||||| |||||||||||||||||    
T  20714041 tatattcatatcatgtttgttacattttgtttaatatttaaatttattcttatctatttg 20714100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 22160752 - 22160697
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  22160752 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 22160697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 23316301 - 23316246
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  23316301 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 23316246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 25921377 - 25921322
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  25921377 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 25921322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 27866328 - 27866383
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| ||||| |||||||||||||    
T  27866328 catatcgtgtttgttacatttgttttaatatttaaatttatttttatctatttgtt 27866383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 50996448 - 50996393
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  50996448 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 50996393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 4959061 - 4959123
Alignment:
Q  11 tgtatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgt 73  Q
    |||||||||||||||| | ||||||||   ||||||||| |||| ||||||||||||||||||    
T  4959061 tgtatattcatatcgtatttgttacattggttttaatatctaaatttattcttatctatttgt 4959123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 13265472 - 13265413
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| ||||| || |  ||||||||||||| |||||||||||||||||||    
T  13265472 tatattcatatcgtgtttgttatattt--tttaatatttaaatttattcttatctatttgtt 13265413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 21796203 - 21796149
Alignment:
Q  20 atatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  21796203 atatcgtgtttgttacatttgttttaatatttaaatttattcttatatatttgtt 21796149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 42713259 - 42713320
Alignment:
Q  12 gtatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||| |||| |||||||| | |||||||||||||| | |||||||||||||||||    
T  42713259 gtatattcatattgtgtttgttacattt-ttttaatatttaaattcattcttatctatttgtt 42713320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 50412838 - 50412781
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||| ||| ||||||| || |||||||||||||| ||||||||||||||||    
T  50412838 tatattcatatcatgtttgttaca-cttttttaatatttaaatttattcttatctattt 50412781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 55118013 - 55118072
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| |  ||||||||||||| ||||| |||||||||||||    
T  55118013 tatattcatatcgtgtttgttacattt--tttaatatttaaatttatttttatctatttgtt 55118072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 627788 - 627727
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| | |||||||| | |||||||||||||| ||||| |||| ||||||||    
T  627788 tatattcatatcgtttttgttacattttttttaatatttaaatttatttttatatatttgtt 627727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 5498636 - 5498576
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||| |||| ||||| || | |||||||||||||| |||||||||||||||||||    
T  5498636 tatattcatattgtgtttgttatattt-ttttaatatttaaatttattcttatctatttgtt 5498576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 20964657 - 20964600
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatt 70  Q
    |||||||||||| ||| |||||||| |  ||||||||||||| |||||||||||||||    
T  20964657 tatattcatatcatgtttgttacatttggtttaatatttaaatttattcttatctatt 20964600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 22852389 - 22852329
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||| |||||| |||||||| | ||| |||||||||| |||||||||||||||||||    
T  22852389 tatattcatgtcgtgtttgttacatttcttt-aatatttaaatttattcttatctatttgtt 22852329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 31135158 - 31135098
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||| ||||||| | |||||||| | |||||||||||||| |||||||||||||||||||    
T  31135158 tatattaatatcgtctttgttacattt-ttttaatatttaaatttattcttatctatttgtt 31135098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 34658817 - 34658757
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | |||||||||||||| | |||||||| ||||||||    
T  34658817 tatattcatatcgtgtttgttacattt-ttttaatatttaaattcattcttatttatttgtt 34658757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 35519015 - 35518955
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||| |||||||||| ||||| || | |||||||||||||| |||||||||||||||||||    
T  35519015 tatatccatatcgtgtttgttatattt-ttttaatatttaaatttattcttatctatttgtt 35518955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 51400330 - 51400390
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| | |||||| | |||||||||||||| ||||| |||||||||||||    
T  51400330 tatattcatatcgtgtttattacattt-ttttaatatttaaatttatttttatctatttgtt 51400390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 54162632 - 54162571
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | ||  |||||||||| ||||||||||||| |||||    
T  54162632 tatattcatatcgtgtttgttacattttttaaaatatttaaatttattcttatctagttgtt 54162571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 6385293 - 6385258
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  6385293 tattttaatatttaaatttattcttatctatttgtt 6385258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 18417324 - 18417378
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatcta 68  Q
    |||||||||||||||| |||||| | | |||||||||||||||||||| |||||||    
T  18417324 tatattcatatcgtgtttgttactttt-ttttaatatttaaagttatttttatcta 18417378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 23432327 - 23432389
Alignment:
Q  11 tgtatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||  ||||||||| |||||||| | |||||||||||||| |||||| ||||||||||||    
T  23432327 tgtatatcaatatcgtgtttgttacattt-ttttaatatttaaatttattcatatctatttgtt 23432389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 26054618 - 26054672
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | | |||||||||||| |||||||||||||||||||    
T  26054618 catatcgtgtttgttacattt-tgttaatatttaaatttattcttatctatttgtt 26054672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 4589853 - 4589792
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatattt-aaagttattcttatctatttgtt 74  Q
    |||||||||| ||||| |||||||| | ||||||||||| ||| |||||||||||||||||||    
T  4589853 tatattcatagcgtgtttgttacattt-ttttaatattttaaatttattcttatctatttgtt 4589792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 5190340 - 5190279
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgttt 75  Q
    |||||||||||||||| ||||| || | |||||||| ||||| ||||| ||||||||||||||    
T  5190340 tatattcatatcgtgtttgttatatttgttttaata-ttaaatttatttttatctatttgttt 5190279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 27551237 - 27551271
Alignment:
Q  40 attttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||||||| |||||||||||||||||||    
T  27551237 attttaatatttaaatttattcttatctatttgtt 27551271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 6788487 - 6788423
Alignment:
Q  9 tgtgtatattcatatcgtgtctgttaca--tctattttaatatttaaagttattcttatctattt 71  Q
    |||||||| ||||||||||| |||||||  | ||||||||||||| || ||| ||||||||||||    
T  6788487 tgtgtatactcatatcgtgtttgttacacttttattttaatatttgaatttactcttatctattt 6788423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 7059255 - 7059218
Alignment:
Q  37 tctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  7059255 tctattttaatatttaaatttattcttatatatttgtt 7059218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 7067942 - 7067979
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtttt 76  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  7067942 tattttaatatttaaatttattcatatctatttgtttt 7067979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 10670995 - 10670962
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  10670995 ttttaatatttaaatttattcttatctatttgtt 10670962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 10884633 - 10884600
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  10884633 ttttaatatttaaatttattcttatctatttgtt 10884600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 12214753 - 12214786
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  12214753 ttttaatatttaaatttattcttatctatttgtt 12214786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 18705933 - 18705986
Alignment:
Q  21 tatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||| ||||| ||  ||||||||||||||| |||||||||| ||||||||    
T  18705933 tatcgtgtttgttatattgattttaatatttaaatttattcttatttatttgtt 18705986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 21020664 - 21020697
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  21020664 ttttaatatttaaatttattcttatctatttgtt 21020697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 21463577 - 21463544
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  21463577 ttttaatatttaaatttattcttatctatttgtt 21463544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 23019569 - 23019602
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  23019569 ttttaatatttaaatttattcttatctatttgtt 23019602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 25438567 - 25438534
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  25438567 ttttaatatttaaatttattcttatctatttgtt 25438534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 32547504 - 32547545
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaa 54  Q
    |||||||||||||||| |||||||| | ||||||||||||||    
T  32547504 tatattcatatcgtgtttgttacatttgttttaatatttaaa 32547545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 39670082 - 39670022
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | ||| |||||||||| ||||| | |||||||||||    
T  39670082 tatattcatatcgtgtttgttacat-tttttaaatatttaaatttattttgatctatttgtt 39670022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 40314808 - 40314841
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  40314808 ttttaatatttaaatttattcttatctatttgtt 40314841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 40324884 - 40324917
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  40324884 ttttaatatttaaatttattcttatctatttgtt 40324917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 43491369 - 43491328
Alignment:
Q  30 tgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||| | |||||||||||||| ||||||||||||||||    
T  43491369 tgttacatttgttttaatatttaaatttattcttatctattt 43491328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 46343042 - 46343075
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  46343042 ttttaatatttaaatttattcttatctatttgtt 46343075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 46576580 - 46576547
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  46576580 ttttaatatttaaatttattcttatctatttgtt 46576547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 48182412 - 48182445
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  48182412 ttttaatatttaaatttattcttatctatttgtt 48182445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 48508946 - 48508979
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  48508946 ttttaatatttaaatttattcttatctatttgtt 48508979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 21954693 - 21954725
Alignment:
Q  42 tttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||||| |||||||||||||||||||    
T  21954693 tttaatatttaaatttattcttatctatttgtt 21954725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 34409933 - 34409996
Alignment:
Q  13 tatattcatatcgtgtctgttaca--tctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||| ||||||||||| |||||||  | ||||||||||||| || ||| |||||||||||||||    
T  34409933 tatactcatatcgtgtttgttacacttatattttaatatttgaatttactcttatctatttgtt 34409996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 74
Target Start/End: Complemental strand, 44469385 - 44469353
Alignment:
Q  42 tttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||||| |||||||||||||||||||    
T  44469385 tttaatatttaaatttattcttatctatttgtt 44469353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 53451153 - 53451090
Alignment:
Q  13 tatattcatatcgtgtctgttaca--tctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||| ||||||||||| |||||||  | ||||||||||||| || ||| |||||||||||||||    
T  53451153 tatactcatatcgtgtttgttacacttatattttaatatttgaatttactcttatctatttgtt 53451090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 254526 - 254466
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgt 73  Q
    |||||||||||||||| |||||| | | |||||||||||||| ||||||||||||||||||    
T  254526 tatattcatatcgtgtttgttacctttgttttaatatttaaatttattcttatctatttgt 254466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 22400 - 22463
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtttt 76  Q
    |||||||||||||||| || ||||| | |||||||||||||| |||||||||||||||| ||||    
T  22400 tatattcatatcgtgtttgctacattttttttaatatttaaatttattcttatctatttttttt 22463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 26677 - 26614
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtttt 76  Q
    |||||||||||||||| |||||||| | |||||||||||||| |||||||||| ||||| ||||    
T  26677 tatattcatatcgtgtatgttacattttttttaatatttaaatttattcttatatatttttttt 26614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 21983 - 21923
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||| | ||||||||||| || |||||||||||||||||||    
T  21983 tatattcatatcgtgtttgttacattt-ttttaatattttaatttattcttatctatttgtt 21923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 16482 - 16422
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||||||| |||| |||||||| | |||||||||||||| |||||||||||||||||||    
T  16482 tatattcatattgtgtttgttacattt-ttttaatatttaaatttattcttatctatttgtt 16422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 82221 - 82166
Alignment:
Q  19 catatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| |||||||| | |||||||||||||| |||||||||| ||||||||    
T  82221 catatcgtgtttgttacatttgttttaatatttaaatttattcttatttatttgtt 82166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 47364 - 47423
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttg 72  Q
    |||||| ||||||||| |||||||| | |||||||||||||| ||||| |||||||||||    
T  47364 tatatttatatcgtgtttgttacatttgttttaatatttaaatttatttttatctatttg 47423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 1201 - 1258
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| |||||||| | ||||| |||||||| ||||||||||||||||    
T  1201 tatattcatatcgtgtttgttacatttttttta-tatttaaatttattcttatctattt 1258  T

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Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 28801 - 28858
Alignment:
Q  17 ttcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgttt 75  Q
    |||||||| ||| |||||||| | |||||||||||||| ||||||||||||||||||||    
T  28801 ttcatatcatgtttgttacattt-ttttaatatttaaatttattcttatctatttgttt 28858  T

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Target: scaffold0123; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 31013 - 31074
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| ||  | || | |||||||||||||| |||||||||||||||||||    
T  31013 tatattcatatcgtgtttgcaatatttcttttaatatttaaatttattcttatctatttgtt 31074  T

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Target: scaffold0043 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 85333 - 85275
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||||||||||| ||||| || | |||||| ||||||| ||||||||||||||||    
T  85333 tatattcatatcgtgtttgttatattttttttaacatttaaatttattcttatctattt 85275  T

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Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 41700 - 41760
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||| ||||||||| ||||| || | |||||||||||||| |||||||||||||||||||    
T  41700 tatatttatatcgtgtttgttatattt-ttttaatatttaaatttattcttatctatttgtt 41760  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 151375 - 151315
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||| ||||| |||||||| | ||||||||||| || |||||||||||||||||||    
T  151375 tatattcatagcgtgtttgttacattt-ttttaatatttcaaattattcttatctatttgtt 151315  T

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Target: scaffold0734 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 4207 - 4242
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  4207 tattttaatatttaaatttattcttatctatttgtt 4242  T

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Target: scaffold0196 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 9368 - 9403
Alignment:
Q  39 tattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||||| |||||||||||||||||||    
T  9368 tattttaatatttaaatttattcttatctatttgtt 9403  T

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Target: scaffold0543 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 5179 - 5122
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||| ||||||| |||||||| | ||||||||||| || ||||||||||||||||    
T  5179 tatattcacatcgtgtttgttacattt-ttttaatattttaatttattcttatctattt 5122  T

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Target: scaffold0492 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 6725 - 6668
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctattt 71  Q
    |||||||| ||||||| |||||||| | ||||||||||| || ||||||||||||||||    
T  6725 tatattcacatcgtgtttgttacattt-ttttaatattttaatttattcttatctattt 6668  T

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Target: scaffold0268 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 21108 - 21047
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    |||||| ||||| ||| |||||||| | ||| |||||||||| ||||| |||||||||||||    
T  21108 tatatttatatcttgtttgttacatttgtttaaatatttaaatttatttttatctatttgtt 21047  T

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Target: scaffold0217 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 3177 - 3237
Alignment:
Q  13 tatattcatatcgtgtctgttacatctattttaatatttaaagttattcttatctatttgtt 74  Q
    ||||||| |||||||| |||||||| | |||||||||||||| |||| ||||| ||||||||    
T  3177 tatattcgtatcgtgtttgttacattt-ttttaatatttaaatttatacttatatatttgtt 3237  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 53984 - 53951
Alignment:
Q  41 ttttaatatttaaagttattcttatctatttgtt 74  Q
    |||||||||||||| |||||||||||||||||||    
T  53984 ttttaatatttaaatttattcttatctatttgtt 53951  T

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