View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15923_low_24 (Length: 221)
Name: NF15923_low_24
Description: NF15923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15923_low_24 |
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Alignment Details
Target: chr2 (Bit Score: 164; Significance: 8e-88; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 16 - 204
Target Start/End: Original strand, 13023479 - 13023665
Alignment:
| Q |
16 |
aagaacaaaatccaaggcggatatcacgtgatacatcatcataataataaatcatgaacttattgaaataatataactcata-ttttttaacttcactct |
114 |
Q |
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| T |
13023479 |
aagaacaaaatccaaggcgaatatcacgtgatacatcat---aataataaatcatgaacttattgaaataatataactcataattttttaacttcactct |
13023575 |
T |
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| Q |
115 |
ttattagccaaattcattaattaataagtaataaaattgaggtaaaaatatactttgtagattcggttatctaaagtgaacaactaactg |
204 |
Q |
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| T |
13023576 |
ttattagccaaattcattaattaataagtaataaaattgaggtaaaaatatactttgtagattcggttatctaaagtgaacaactaactg |
13023665 |
T |
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