View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15925_high_10 (Length: 260)
Name: NF15925_high_10
Description: NF15925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15925_high_10 |
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Alignment Details
Target: chr5 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 33054512 - 33054754
Alignment:
| Q |
1 |
tcatcgtacaccctttaactttctttaccttattcttttccattatcactttcactcactcccaaaccaacgatgcttccatcatgcaaaccctaaaaaa |
100 |
Q |
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| T |
33054512 |
tcatcgtacaccctttaactttctttaccttattcttttccattatcactttcactcactcccaaaccaacgatgcttccatcatgcaaaccctaaaaaa |
33054611 |
T |
|
| Q |
101 |
caaccttaaaccgcctctttcacttggttggtccgacccggatccatgtaaatggacccacgtttcttgttctgacgacaaccgtgtaacgagaatccaa |
200 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
33054612 |
caaccttaaaccgcctctttcgcttggttggtccgacccggatccatgtaaatggacccacgtttcttgttccgacgacaaccgtgtaacgagaatccaa |
33054711 |
T |
|
| Q |
201 |
atcggtcgccagaatctccatggcacacttcctcaaacccttc |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33054712 |
atcggtcgccagaatctccatggcacacttcctcaaacccttc |
33054754 |
T |
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