View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15925_high_14 (Length: 210)
Name: NF15925_high_14
Description: NF15925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15925_high_14 |
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Alignment Details
Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 13 - 193
Target Start/End: Original strand, 30808436 - 30808616
Alignment:
| Q |
13 |
tcaaaacgttccacgtctttgtcaaacatttatcagattggttcatatgttagtttccgtctttgacagttttaattgtgatgacataaggatttcatgg |
112 |
Q |
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| T |
30808436 |
tcaaaatgttccacgtctttgtcaaacatttatcagattggttcatctgttaatttctgtctttgacagttttaattgtgttgacataaggatttcatgg |
30808535 |
T |
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| Q |
113 |
agacatgcttgtgcatctatcggttataggaatgaaagctaattctcaatttatctttatattttcagattctcttaccca |
193 |
Q |
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| T |
30808536 |
agacatgcttgtgcatctatcggttataggaatgaaagctaattctcaatttacctttatattttcagattctcttaccca |
30808616 |
T |
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