View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15925_low_18 (Length: 203)
Name: NF15925_low_18
Description: NF15925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15925_low_18 |
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Alignment Details
Target: chr5 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 4 - 186
Target Start/End: Original strand, 33054572 - 33054754
Alignment:
| Q |
4 |
cccaaaccaacgagcctcccaccatgcaaacccnnnnnnncaccctaaaaccgcctctttcacttggttggtccgacccggatccatgtaaatggaccca |
103 |
Q |
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| T |
33054572 |
cccaaaccaacgatgcttccatcatgcaaaccctaaaaaacaaccttaaaccgcctctttcgcttggttggtccgacccggatccatgtaaatggaccca |
33054671 |
T |
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| Q |
104 |
cgtttcttgttctgacgacaaccgtgtaacgagaatccaaatcggtcgccagaatctccatggcacacttcctcaaacccttc |
186 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33054672 |
cgtttcttgttccgacgacaaccgtgtaacgagaatccaaatcggtcgccagaatctccatggcacacttcctcaaacccttc |
33054754 |
T |
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