View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15926_low_10 (Length: 379)
Name: NF15926_low_10
Description: NF15926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15926_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 355; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 1 - 363
Target Start/End: Complemental strand, 32615074 - 32614712
Alignment:
| Q |
1 |
taatattttgaacattacttcgttttgtgaactaaactgtatgtgtttttgcgatccgtttgacagctgaagtagaagctttgacggtgcctgattcgtg |
100 |
Q |
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| T |
32615074 |
taatattttgaacattacttcgttttgtgaactgaactgtatgtgtttttgcgatccgtttgacagctgaagtagaagctttgacggtgcctgattcatg |
32614975 |
T |
|
| Q |
101 |
caagattcacgaaaaagtgaactcacagattttcaccggcatgatggcctttgtgatgggactcataaccatggtgagaatgacacgaaacatgccgaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32614974 |
caagattcacgaaaaagtgaactcacagattttcaccggcatgatggcctttgtgatgggactcataaccatggtgagaatgacacgaaacatgccgaag |
32614875 |
T |
|
| Q |
201 |
aggctcactgatgccaacttctactcaaattctgtttactctggtggtgactttaaaactgaagactctaatgaccaattgaccaaccctaccatttcgg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32614874 |
aggctcactgatgccaacttctactcaaattctgtttactctggtggtgactttaaaactgaagactctaatgaccaattgaccaaccctaccatttcgg |
32614775 |
T |
|
| Q |
301 |
ctcaagagtttatgactgttatgaagcgcatggctgagttggaagataaaatgggcaacatga |
363 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32614774 |
ctcaagagtttatgactgttatgaagcgcatggctgagttggaagataaaatgggcaacatga |
32614712 |
T |
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