View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15927_high_39 (Length: 332)
Name: NF15927_high_39
Description: NF15927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15927_high_39 |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 18 - 273
Target Start/End: Original strand, 44844220 - 44844475
Alignment:
| Q |
18 |
aggaggcacttcaatatagatgaaaatagggtggtgattgatttacaactaaaagaaacttaacgaaaataatcatttgttaaccttacatggatatgta |
117 |
Q |
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| T |
44844220 |
aggaggcacttcaatatagatgaaaatagagtggtgattgatttacaactataagaaacttaacgaaaataatcatttgttaaccttacatggatatgta |
44844319 |
T |
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| Q |
118 |
tatataccatacgactgaaactcttaacgatggagattgagtgtcagcagcagtagctgtctcatgtctcttgaagttttaactaccagcattttgaatg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44844320 |
tatataccatacgactgaaactcttaacgatggagattgagtgtcagcagcagtagctgtctcatgtctcttgaagttttaactaccagcattttgaatg |
44844419 |
T |
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| Q |
218 |
gtgggaagttggtgtaaaacaaaggtggagagtcctttgttggggtagaatggtag |
273 |
Q |
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| T |
44844420 |
gtgggaagttggtgtaaaacaaaggtggagagtcctttgttggggtagaatggtag |
44844475 |
T |
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