View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15927_low_32 (Length: 396)

Name: NF15927_low_32
Description: NF15927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15927_low_32
NF15927_low_32
[»] chr1 (42 HSPs)
chr1 (79-292)||(41460983-41461194)
chr1 (121-289)||(23482453-23482620)
chr1 (121-291)||(41462647-41462821)
chr1 (206-294)||(11928326-11928414)
chr1 (113-288)||(46533051-46533216)
chr1 (206-288)||(49484072-49484154)
chr1 (113-177)||(11928469-11928533)
chr1 (108-166)||(42491824-42491882)
chr1 (109-166)||(12115844-12115901)
chr1 (109-166)||(45417110-45417167)
chr1 (109-161)||(18912900-18912952)
chr1 (114-166)||(21618462-21618514)
chr1 (109-164)||(1648041-1648096)
chr1 (81-136)||(41462832-41462887)
chr1 (109-166)||(16165451-16165508)
chr1 (109-166)||(44264294-44264351)
chr1 (79-136)||(46533219-46533276)
chr1 (79-136)||(46533323-46533380)
chr1 (109-162)||(52407732-52407785)
chr1 (113-164)||(51271998-51272049)
chr1 (128-166)||(25931617-25931655)
chr1 (110-166)||(47791184-47791240)
chr1 (91-166)||(4100105-4100180)
chr1 (115-166)||(39282212-39282263)
chr1 (128-166)||(43762280-43762318)
chr1 (109-158)||(27891980-27892029)
chr1 (323-385)||(3181347-3181409)
chr1 (323-385)||(4177048-4177110)
chr1 (323-385)||(5640723-5640785)
chr1 (323-385)||(5842950-5843012)
chr1 (323-385)||(7517030-7517092)
chr1 (323-385)||(12615336-12615398)
chr1 (323-385)||(12740274-12740336)
chr1 (323-385)||(19186951-19187013)
chr1 (323-385)||(21876894-21876956)
chr1 (323-385)||(35639051-35639113)
chr1 (323-385)||(36237443-36237505)
chr1 (323-385)||(38094205-38094267)
chr1 (323-385)||(38104831-38104893)
chr1 (323-385)||(47608949-47609011)
chr1 (323-385)||(51630205-51630267)
chr1 (113-150)||(6537431-6537468)
[»] chr6 (41 HSPs)
chr6 (86-292)||(24223299-24223498)
chr6 (109-285)||(16799296-16799472)
chr6 (81-292)||(6601699-6601908)
chr6 (110-288)||(24222962-24223139)
chr6 (190-292)||(17079876-17079978)
chr6 (195-292)||(12296024-12296121)
chr6 (201-292)||(17201492-17201583)
chr6 (109-288)||(33482167-33482348)
chr6 (109-166)||(17203346-17203403)
chr6 (109-166)||(17906324-17906381)
chr6 (109-175)||(17073113-17073179)
chr6 (83-136)||(2970111-2970164)
chr6 (113-166)||(23622769-23622822)
chr6 (109-166)||(29201949-29202006)
chr6 (103-166)||(34294402-34294465)
chr6 (109-166)||(809475-809532)
chr6 (109-166)||(4099815-4099872)
chr6 (109-166)||(26832041-26832098)
chr6 (79-136)||(33482085-33482142)
chr6 (130-166)||(23902671-23902707)
chr6 (128-166)||(17011438-17011476)
chr6 (128-169)||(17080412-17080453)
chr6 (109-166)||(32208157-32208214)
chr6 (114-166)||(809376-809428)
chr6 (130-166)||(17080458-17080494)
chr6 (323-385)||(3671202-3671264)
chr6 (323-385)||(12717817-12717879)
chr6 (323-385)||(12864689-12864751)
chr6 (323-385)||(16958766-16958828)
chr6 (324-370)||(17063380-17063426)
chr6 (323-385)||(17609440-17609502)
chr6 (323-385)||(20030902-20030964)
chr6 (323-385)||(25985235-25985297)
chr6 (323-385)||(26035178-26035240)
chr6 (323-385)||(26874560-26874622)
chr6 (323-385)||(27412243-27412305)
chr6 (323-385)||(32302027-32302089)
chr6 (323-385)||(32962927-32962989)
chr6 (323-385)||(34808143-34808205)
chr6 (325-385)||(9113474-9113534)
chr6 (325-385)||(25725483-25725543)
[»] chr7 (60 HSPs)
chr7 (111-292)||(16376276-16376457)
chr7 (109-287)||(41278971-41279148)
chr7 (105-292)||(4455499-4455685)
chr7 (109-284)||(24788578-24788751)
chr7 (189-292)||(34988798-34988901)
chr7 (201-288)||(5553754-5553841)
chr7 (291-389)||(16408770-16408868)
chr7 (79-166)||(21224864-21224950)
chr7 (222-289)||(16377527-16377594)
chr7 (109-166)||(22324793-22324850)
chr7 (79-136)||(41279147-41279204)
chr7 (109-166)||(16491867-16491924)
chr7 (111-166)||(40686416-40686471)
chr7 (129-175)||(46263824-46263870)
chr7 (109-166)||(9396165-9396222)
chr7 (109-166)||(19222643-19222700)
chr7 (79-136)||(26454502-26454559)
chr7 (109-166)||(40449620-40449677)
chr7 (109-166)||(45419143-45419200)
chr7 (79-135)||(16376218-16376274)
chr7 (90-166)||(18487714-18487790)
chr7 (79-166)||(34838060-34838146)
chr7 (128-166)||(35125195-35125233)
chr7 (79-136)||(16376122-16376179)
chr7 (109-166)||(16672051-16672108)
chr7 (109-166)||(17646419-17646476)
chr7 (109-166)||(27712196-27712253)
chr7 (109-166)||(28170392-28170449)
chr7 (109-169)||(4455298-4455357)
chr7 (109-169)||(11649588-11649648)
chr7 (109-166)||(2354271-2354329)
chr7 (109-163)||(21128577-21128631)
chr7 (141-244)||(38694698-38694802)
chr7 (109-158)||(45285979-45286028)
chr7 (135-166)||(2526805-2526836)
chr7 (323-370)||(13175664-13175711)
chr7 (323-385)||(176676-176738)
chr7 (323-385)||(458041-458103)
chr7 (323-385)||(1997342-1997404)
chr7 (323-385)||(2706668-2706730)
chr7 (323-385)||(4221794-4221856)
chr7 (323-385)||(6868285-6868347)
chr7 (323-385)||(6878927-6878989)
chr7 (323-385)||(8003121-8003183)
chr7 (323-385)||(8627131-8627193)
chr7 (323-385)||(9094173-9094235)
chr7 (323-385)||(11004365-11004427)
chr7 (323-385)||(11014974-11015036)
chr7 (323-385)||(17951169-17951231)
chr7 (323-385)||(20988843-20988905)
chr7 (323-385)||(24743887-24743949)
chr7 (79-113)||(24787505-24787539)
chr7 (323-385)||(26391149-26391211)
chr7 (323-385)||(26654391-26654453)
chr7 (323-385)||(40043159-40043221)
chr7 (79-133)||(41279249-41279303)
chr7 (323-385)||(42875634-42875696)
chr7 (109-166)||(11645568-11645625)
chr7 (79-136)||(21128630-21128686)
chr7 (109-166)||(48640546-48640603)
[»] scaffold0090 (1 HSPs)
scaffold0090 (79-292)||(12243-12453)
[»] chr3 (50 HSPs)
chr3 (79-292)||(25716672-25716879)
chr3 (79-289)||(9240564-9240778)
chr3 (109-289)||(17755864-17756044)
chr3 (109-289)||(19057184-19057364)
chr3 (109-292)||(25917232-25917414)
chr3 (79-289)||(9856272-9856484)
chr3 (109-177)||(25937959-25938027)
chr3 (113-178)||(2469263-2469328)
chr3 (79-136)||(17756043-17756100)
chr3 (79-136)||(19057363-19057420)
chr3 (109-166)||(20876751-20876808)
chr3 (79-136)||(25917079-25917136)
chr3 (79-136)||(25938026-25938083)
chr3 (109-166)||(38887094-38887151)
chr3 (113-166)||(51654508-51654561)
chr3 (113-164)||(11523087-11523138)
chr3 (323-385)||(29934534-29934596)
chr3 (323-385)||(29983688-29983750)
chr3 (247-292)||(25937861-25937906)
chr3 (109-166)||(35560458-35560514)
chr3 (109-161)||(47502641-47502693)
chr3 (323-385)||(505141-505203)
chr3 (323-385)||(4753523-4753585)
chr3 (323-385)||(5520072-5520134)
chr3 (323-385)||(5537992-5538054)
chr3 (323-385)||(5580604-5580666)
chr3 (323-385)||(5866667-5866729)
chr3 (323-385)||(8784467-8784529)
chr3 (323-385)||(11273356-11273418)
chr3 (323-385)||(12238588-12238650)
chr3 (323-385)||(12287951-12288013)
chr3 (323-385)||(14475425-14475487)
chr3 (327-385)||(15652079-15652137)
chr3 (323-385)||(15848098-15848160)
chr3 (323-385)||(16392019-16392081)
chr3 (323-385)||(17016979-17017041)
chr3 (323-385)||(19788226-19788288)
chr3 (323-385)||(20674168-20674230)
chr3 (323-385)||(23767098-23767160)
chr3 (323-385)||(24384489-24384551)
chr3 (323-385)||(24669674-24669736)
chr3 (323-385)||(28315209-28315271)
chr3 (323-385)||(37884783-37884845)
chr3 (323-385)||(38204456-38204518)
chr3 (323-385)||(39381888-39381950)
chr3 (323-385)||(41693453-41693515)
chr3 (203-244)||(2469203-2469244)
chr3 (323-376)||(9982868-9982921)
chr3 (324-385)||(13147243-13147304)
chr3 (79-124)||(25917178-25917223)
[»] chr2 (45 HSPs)
chr2 (79-288)||(41075578-41075789)
chr2 (115-292)||(17930274-17930453)
chr2 (109-290)||(15256359-15256534)
chr2 (109-292)||(11131372-11131554)
chr2 (103-288)||(41075885-41076072)
chr2 (103-288)||(41076167-41076354)
chr2 (113-292)||(27351841-27352023)
chr2 (189-286)||(15783008-15783108)
chr2 (192-285)||(38857683-38857775)
chr2 (113-178)||(15253508-15253573)
chr2 (114-178)||(24129578-24129642)
chr2 (109-166)||(11658009-11658066)
chr2 (79-136)||(15256303-15256360)
chr2 (109-166)||(20641338-20641395)
chr2 (109-166)||(41326930-41326987)
chr2 (109-166)||(14336084-14336141)
chr2 (109-166)||(44256883-44256940)
chr2 (114-166)||(20709366-20709418)
chr2 (89-136)||(15256214-15256261)
chr2 (79-136)||(17930212-17930269)
chr2 (79-136)||(27351781-27351838)
chr2 (109-166)||(29550533-29550589)
chr2 (109-166)||(41995281-41995338)
chr2 (206-292)||(15253637-15253720)
chr2 (113-166)||(10129048-10129101)
chr2 (109-162)||(11736563-11736616)
chr2 (109-166)||(12898437-12898494)
chr2 (79-136)||(15253448-15253505)
chr2 (79-136)||(41326986-41327042)
chr2 (323-385)||(4219655-4219717)
chr2 (323-385)||(9898564-9898626)
chr2 (323-385)||(10276746-10276808)
chr2 (323-385)||(11396163-11396225)
chr2 (323-385)||(22915851-22915913)
chr2 (323-385)||(24328740-24328802)
chr2 (323-385)||(24802642-24802704)
chr2 (323-385)||(29253979-29254041)
chr2 (323-385)||(35262763-35262825)
chr2 (323-385)||(35273388-35273450)
chr2 (108-166)||(37131016-37131074)
chr2 (323-385)||(39171085-39171147)
chr2 (323-385)||(40250368-40250430)
chr2 (323-385)||(43092438-43092500)
chr2 (323-385)||(43354189-43354251)
chr2 (323-367)||(20567215-20567259)
[»] chr8 (36 HSPs)
chr8 (112-285)||(31249157-31249327)
chr8 (79-292)||(13461639-13461840)
chr8 (109-292)||(38294775-38294945)
chr8 (90-165)||(27853190-27853265)
chr8 (109-166)||(30206290-30206347)
chr8 (207-273)||(39616865-39616931)
chr8 (109-166)||(3990601-3990658)
chr8 (109-166)||(13797746-13797803)
chr8 (109-166)||(30437633-30437690)
chr8 (81-136)||(38294721-38294776)
chr8 (323-385)||(21297928-21297990)
chr8 (109-166)||(44014885-44014942)
chr8 (110-166)||(23086188-23086244)
chr8 (131-166)||(1276400-1276435)
chr8 (323-385)||(30315731-30315793)
chr8 (323-385)||(45569039-45569101)
chr8 (109-158)||(9389282-9389331)
chr8 (121-166)||(14683209-14683254)
chr8 (122-166)||(23960175-23960219)
chr8 (86-134)||(31249105-31249153)
chr8 (323-385)||(251613-251675)
chr8 (323-385)||(814714-814776)
chr8 (323-385)||(849981-850043)
chr8 (323-385)||(3349641-3349703)
chr8 (323-385)||(9367499-9367561)
chr8 (323-385)||(13689576-13689638)
chr8 (323-385)||(19138484-19138546)
chr8 (323-385)||(29075945-29076007)
chr8 (323-385)||(29086196-29086258)
chr8 (90-136)||(31249040-31249086)
chr8 (323-385)||(32078702-32078764)
chr8 (109-159)||(34948022-34948072)
chr8 (323-385)||(36087727-36087789)
chr8 (323-385)||(36302731-36302793)
chr8 (323-385)||(44490919-44490981)
chr8 (323-375)||(19428127-19428179)
[»] chr5 (58 HSPs)
chr5 (113-292)||(7779576-7779754)
chr5 (109-294)||(14854375-14854560)
chr5 (79-292)||(3433087-3433302)
chr5 (109-168)||(5398190-5398249)
chr5 (103-166)||(19322567-19322630)
chr5 (109-163)||(9487587-9487641)
chr5 (109-166)||(7128007-7128064)
chr5 (109-161)||(23141052-23141104)
chr5 (109-163)||(13104839-13104893)
chr5 (112-166)||(16305877-16305931)
chr5 (79-136)||(5398248-5398305)
chr5 (109-166)||(19122705-19122761)
chr5 (113-166)||(41092501-41092554)
chr5 (323-385)||(11209089-11209151)
chr5 (112-166)||(12441878-12441932)
chr5 (323-385)||(25112992-25113054)
chr5 (323-385)||(25172083-25172145)
chr5 (79-136)||(14854559-14854616)
chr5 (79-136)||(14854653-14854710)
chr5 (79-166)||(31486587-31486667)
chr5 (109-166)||(41511457-41511513)
chr5 (81-136)||(7779757-7779812)
chr5 (323-385)||(1121007-1121069)
chr5 (323-385)||(5300247-5300309)
chr5 (323-385)||(6976900-6976962)
chr5 (323-385)||(9337048-9337110)
chr5 (323-385)||(14031136-14031198)
chr5 (323-385)||(14456717-14456779)
chr5 (323-385)||(14567758-14567820)
chr5 (323-385)||(15741063-15741125)
chr5 (323-385)||(16003001-16003063)
chr5 (323-385)||(17608156-17608218)
chr5 (323-385)||(17720012-17720074)
chr5 (323-385)||(19465066-19465128)
chr5 (323-385)||(22677210-22677272)
chr5 (323-385)||(23297371-23297433)
chr5 (323-385)||(23363204-23363266)
chr5 (323-385)||(23697874-23697936)
chr5 (323-385)||(24568182-24568244)
chr5 (323-385)||(24809010-24809072)
chr5 (323-385)||(24826580-24826642)
chr5 (323-385)||(27051942-27052004)
chr5 (323-385)||(27461256-27461318)
chr5 (323-385)||(27621877-27621939)
chr5 (323-385)||(30237131-30237193)
chr5 (323-385)||(31349628-31349690)
chr5 (323-385)||(31834574-31834636)
chr5 (323-385)||(34773003-34773065)
chr5 (323-385)||(35216597-35216659)
chr5 (323-385)||(36592222-36592284)
chr5 (323-385)||(36688792-36688854)
chr5 (323-385)||(37739672-37739734)
chr5 (128-166)||(38110358-38110396)
chr5 (323-385)||(39353590-39353652)
chr5 (323-385)||(40391452-40391514)
chr5 (323-385)||(42043874-42043936)
chr5 (109-166)||(38004268-38004325)
chr5 (323-383)||(24982515-24982575)
[»] chr4 (46 HSPs)
chr4 (79-243)||(9711386-9711549)
chr4 (189-292)||(19553394-19553497)
chr4 (79-290)||(11874760-11874991)
chr4 (79-227)||(29013640-29013787)
chr4 (108-166)||(7822070-7822128)
chr4 (109-178)||(24389736-24389805)
chr4 (109-166)||(53144347-53144404)
chr4 (108-166)||(22293443-22293501)
chr4 (108-166)||(24050148-24050206)
chr4 (109-166)||(7797819-7797876)
chr4 (109-166)||(28379557-28379614)
chr4 (109-166)||(28813679-28813736)
chr4 (109-166)||(54653171-54653228)
chr4 (190-288)||(33117297-33117395)
chr4 (109-166)||(2177592-2177649)
chr4 (109-166)||(8119064-8119121)
chr4 (109-166)||(18001810-18001867)
chr4 (109-172)||(2527208-2527271)
chr4 (109-166)||(4942157-4942214)
chr4 (109-166)||(8478743-8478800)
chr4 (109-166)||(12899930-12899987)
chr4 (109-153)||(7812605-7812649)
chr4 (109-157)||(8397157-8397205)
chr4 (114-166)||(52688967-52689019)
chr4 (114-166)||(12795727-12795779)
chr4 (130-178)||(46883538-46883590)
chr4 (323-385)||(460381-460443)
chr4 (323-385)||(5021954-5022016)
chr4 (323-385)||(10741573-10741635)
chr4 (323-385)||(10955342-10955404)
chr4 (323-385)||(14711798-14711860)
chr4 (323-385)||(16265683-16265745)
chr4 (323-385)||(17927917-17927979)
chr4 (323-385)||(18131224-18131286)
chr4 (323-385)||(18753465-18753527)
chr4 (323-385)||(19945313-19945375)
chr4 (323-385)||(22006235-22006297)
chr4 (323-385)||(27175892-27175954)
chr4 (323-385)||(27666391-27666453)
chr4 (323-385)||(27815921-27815983)
chr4 (323-385)||(30927468-30927530)
chr4 (323-385)||(36028109-36028171)
chr4 (323-385)||(40455335-40455397)
chr4 (128-162)||(47631987-47632021)
chr4 (323-385)||(49517355-49517417)
chr4 (323-385)||(55746227-55746289)
[»] scaffold0001 (2 HSPs)
scaffold0001 (108-169)||(196270-196331)
scaffold0001 (79-119)||(196215-196255)
[»] scaffold0013 (1 HSPs)
scaffold0013 (109-166)||(102947-103004)
[»] scaffold0097 (1 HSPs)
scaffold0097 (114-166)||(13204-13256)
[»] scaffold1820 (1 HSPs)
scaffold1820 (323-385)||(623-685)
[»] scaffold0011 (1 HSPs)
scaffold0011 (323-385)||(165716-165778)
[»] scaffold0443 (1 HSPs)
scaffold0443 (323-385)||(2073-2135)
[»] scaffold0317 (1 HSPs)
scaffold0317 (323-385)||(11610-11672)
[»] scaffold0315 (1 HSPs)
scaffold0315 (323-385)||(7661-7723)
[»] scaffold0211 (1 HSPs)
scaffold0211 (323-385)||(560-622)
[»] scaffold0105 (1 HSPs)
scaffold0105 (323-385)||(37969-38031)
[»] scaffold0012 (1 HSPs)
scaffold0012 (323-385)||(11344-11406)
[»] scaffold0368 (1 HSPs)
scaffold0368 (247-292)||(264-309)
[»] scaffold0017 (1 HSPs)
scaffold0017 (323-383)||(41406-41466)


Alignment Details
Target: chr1 (Bit Score: 119; Significance: 1e-60; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 79 - 292
Target Start/End: Complemental strand, 41461194 - 41460983
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtc 178  Q
    ||||||||| ||||||||||||||||||||||||| |||||  ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41461194 agagaaacatggtttagggtttgctatatatagcccagtttggatgaaaattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtc 41461095  T
Q  179 nnnnnnnnnngtctacagaaaaaatagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttg 278  Q
              ||||| ||||| |||| ||||||||||||||||||||||||  ||| |||||||||  ||||||||||||||||||||||||||||| ||    
T  41461094 --aaaaaaaagtctagagaaacaataaatatatacaaacgatgacacaacataatatgaatgaaaagctcatcagtgaggagaaatattagggattgctg 41460997  T
Q  279 cattttagagggaa 292  Q
    ||||||||||||||    
T  41460996 cattttagagggaa 41460983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 121 - 289
Target Start/End: Original strand, 23482453 - 23482620
Alignment:
Q  121 catggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnngtctacagaaaaaatagatatatacaaacgat 220  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||| |||||||| |||||||||||    
T  23482453 catggaaattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcaaaaaaaat-gtctacagaaacaatagataaatacaaacgat 23482551  T
Q  221 gacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagagg 289  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||    
T  23482552 gacacgacatgataggaatgaaaaactcatcagtgaggagaaatattagagattgctgcattttagagg 23482620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 121 - 291
Target Start/End: Complemental strand, 41462821 - 41462647
Alignment:
Q  121 catggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnn----gtctacagaaaaaatagatatatacaaa 216  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||              ||||| ||||| ||||||||||||||||    
T  41462821 catggaaattagggtattttgtttgtaaacgtattaaataagtgtacaacaacttgtcaaaaaaaaaaaaaagtctagagaaacaatagatatatacaaa 41462722  T
Q  217 cgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagaggga 291  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  41462721 cgatgacacaacatgataggaatgaaaaactcatcagtgaggagaaatattagggattgctacattttagaggga 41462647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 11928414 - 11928326
Alignment:
Q  206 atatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagagggaaat 294  Q
    |||||||||||||||||||||||| ||||||||||||||  |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  11928414 atatatacaaacgatgacacaacaagataggaatgaaaagctcattagtgaggagaaatattagggattgctgcattttagagggaaat 11928326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 113 - 288
Target Start/End: Complemental strand, 46533216 - 46533051
Alignment:
Q  113 cgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnngtctacagaaaa---aatagatat 209  Q
    ||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||               | | ||||   |||||||||    
T  46533216 cgagtttgcatgaaaattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtaa-------------aaaaaaaatctaatagatat 46533130  T
Q  210 atacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagag 288  Q
    |||||||||||||||||| | ||||||||||||||  ||||||||| |||||||||||| ||||||| |||||||||||    
T  46533129 atacaaacgatgacacaatatgataggaatgaaaagctcatcagtgtggagaaatattatggattgtagcattttagag 46533051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 49484154 - 49484072
Alignment:
Q  206 atatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagag 288  Q
    ||||||||||| |||||||||||| ||||| ||||||||  | ||||||||||||||||||||||||||||||||| ||||||    
T  49484154 atatatacaaatgatgacacaacatgatagaaatgaaaagcttatcagtgaggagaaatattagggattgttgcatgttagag 49484072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 11928533 - 11928469
Alignment:
Q  113 cgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgt 177  Q
    ||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11928533 cgagttttcatggaaattagggtattctgtttgtaaaagtattaaataagtgtacaacaacttgt 11928469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 42491824 - 42491882
Alignment:
Q  108 atagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  42491824 atagtcgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgta 42491882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 12115901 - 12115844
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||    
T  12115901 tagccgagtttgcatggaaattagggtattttgtttgtaaacgtattaaataagtgta 12115844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 45417110 - 45417167
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||    
T  45417110 tagccgagtttgcatgcaaattagggtattctgtttgtaaacgtattaaataagtgta 45417167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 18912952 - 18912900
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataa 161  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  18912952 tagccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataa 18912900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 21618514 - 21618462
Alignment:
Q  114 gagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  21618514 gagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgta 21618462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 1648096 - 1648041
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtg 164  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||    
T  1648096 tagccgagtttgcatggaaattagggtattttgtttgtaaacgtattaaataagtg 1648041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 41462887 - 41462832
Alignment:
Q  81 agaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| |||||||||    
T  41462887 agaaacacggtttagggtttgctatatatagctgagtttgcatggaaattagggta 41462832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 16165451 - 16165508
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||| ||| |||||| |||||| ||||||||||||||||||||||||||||||||    
T  16165451 tagccgaatttgcatggaaattaggatattctgtttgtaaacgtattaaataagtgta 16165508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 44264351 - 44264294
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| |||| ||||||| ||||||||||||||||||||||||||    
T  44264351 tagccgagtttgcatggaaattatggtattcagtttgtaaacgtattaaataagtgta 44264294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 46533276 - 46533219
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    |||||| |||||||||| ||||||||||||||||||||||| |||||| |||||||||    
T  46533276 agagaagcacggtttagagtttgctatatatagccgagtttgcatggaaattagggta 46533219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 46533380 - 46533323
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    |||||||||||||||||||||| |||||||||||||||||| | |||| |||||||||    
T  46533380 agagaaacacggtttagggttttctatatatagccgagtttgcgtggaaattagggta 46533323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 52407732 - 52407785
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataag 162  Q
    ||||||||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  52407732 tagccgagtttgcatggaaattagggtattctgtttataaacgtattaaataag 52407785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 51271998 - 51272049
Alignment:
Q  113 cgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtg 164  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||||||||||    
T  51271998 cgagtttgcatggaaattaaggtattctgtttgtaaacgtattaaataagtg 51272049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 25931617 - 25931655
Alignment:
Q  128 attagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25931617 attagggtattctgtttgtaaacgtattaaataagtgta 25931655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 47791240 - 47791184
Alignment:
Q  110 agccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||| ||||| |||||| ||||||||||||| |||||||||||||||||||| ||||    
T  47791240 agccaagtttgcatggaaattagggtattctatttgtaaacgtattaaataaatgta 47791184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 166
Target Start/End: Original strand, 4100105 - 4100180
Alignment:
Q  91 tttagggtttgctatatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||| ||| |||||||| || ||||| |||| | ||| ||||||||| ||||| |||||||||||||||||||    
T  4100105 tttagggcttggtatatataaccaagtttacatgaaaatttgggtattctatttgttaacgtattaaataagtgta 4100180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 166
Target Start/End: Complemental strand, 39282263 - 39282212
Alignment:
Q  115 agtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||| |||||| |||| |||||||||||||||| |||||||||||||||||    
T  39282263 agtttacatggaaattaaggtattctgtttgtaaccgtattaaataagtgta 39282212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 43762318 - 43762280
Alignment:
Q  128 attagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  43762318 attagggtattctatttgtaaacgtattaaataagtgta 43762280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 27892029 - 27891980
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaa 158  Q
    ||||||||||| |||| | |||| ||||||||||||||||||||||||||    
T  27892029 tagccgagtttacatgaaaattaaggtattctgtttgtaaacgtattaaa 27891980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 3181347 - 3181409
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  3181347 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 3181409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 4177048 - 4177110
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  4177048 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 4177110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 5640785 - 5640723
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  5640785 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 5640723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 5842950 - 5843012
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  5842950 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 5843012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 7517030 - 7517092
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  7517030 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 7517092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 12615398 - 12615336
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  12615398 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 12615336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 12740274 - 12740336
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  12740274 ccaccatgaaaactcttctgcatctccattaaactttggagcttttccagagtctgttttctt 12740336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 19186951 - 19187013
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  19186951 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 19187013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 21876894 - 21876956
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  21876894 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 21876956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 35639113 - 35639051
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  35639113 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 35639051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 36237505 - 36237443
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  36237505 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 36237443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 38094205 - 38094267
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  38094205 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 38094267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 38104831 - 38104893
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  38104831 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 38104893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 47609011 - 47608949
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  47609011 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 47608949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 51630267 - 51630205
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  51630267 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 51630205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 6537431 - 6537468
Alignment:
Q  113 cgagtttccatggatattagggtattctgtttgtaaac 150  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  6537431 cgagtttgcatggaaattagggtattctgtttgtaaac 6537468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 7e-59; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 86 - 292
Target Start/End: Original strand, 24223299 - 24223498
Alignment:
Q  86 cacggtttagggtttgctatatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnn 185  Q
    ||||||||||||||| |||||||||||||||||     ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||           
T  24223299 cacggtttagggtttcctatatatagccgagtt-----ggaaattagggtattctgtttgtaaatgtattaaataagtgtacaacaacttgtcaaaaaaa 24223393  T
Q  186 nnngtctacagaaaaaatagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcatttta 285  Q
       ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  24223394 a--gtctagagaaacaatagatatatacaaacgatgacacaacatgataggaatgaaaagctcatcagtgaggagaaatattagggattgctgcatttta 24223491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 109 - 285
Target Start/End: Original strand, 16799296 - 16799472
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnngtctacagaaaaaatagata 208  Q
    ||||||||||| |||| | ||||||||||| |||||||||| |||||||||||||||||||||||||||           ||||||||||| ||||||||    
T  16799296 tagccgagtttgcatgaaaattagggtattatgtttgtaaatgtattaaataagtgtacaacaacttgtaaaaaaaaaatgtctacagaaacaatagata 16799395  T
Q  209 tatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcatttta 285  Q
    ||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||| |||||||||    
T  16799396 tatacaaacgatgacacaacaggatagaaatgaaaagctcatcagtgaggagaaatattaaggattgctgcatttta 16799472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 81 - 292
Target Start/End: Original strand, 6601699 - 6601908
Alignment:
Q  81 agaaacacggtttagggtttgctatatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnn 180  Q
    ||||||||||| ||||||||| ||||| | ||||||||| ||||||  |||||||||| |||| ||||| |||||||||||||||||||||||||||       
T  6601699 agaaacacggtatagggtttgttatattttgccgagtttgcatggaacttagggtattatgttcgtaaatgtattaaataagtgtacaacaacttgt--t 6601796  T
Q  181 nnnnnnnngtctacagaaaaaatagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgca 280  Q
            |||||||  |  |||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||||||| ||||| ||||    
T  6601797 aaaaaaaagtctacattatcaatagatatatacaaacgatgacatagcaggataggaatgaaaaactcatcagtgagaagaaatattagagattgctgca 6601896  T
Q  281 ttttagagggaa 292  Q
    ||||||||||||    
T  6601897 ttttagagggaa 6601908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 110 - 288
Target Start/End: Original strand, 24222962 - 24223139
Alignment:
Q  110 agccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnngtctacagaaaaaatagatat 209  Q
    |||||||||| |||| | ||| ||||||| ||||| ||||||||||||||||||||||||||||||||           ||||| ||||| |||||||||    
T  24222962 agccgagtttgcatgaaaattggggtattatgtttttaaacgtattaaataagtgtacaacaacttgt-aaaaaaaaaagtctagagaaacaatagatat 24223060  T
Q  210 atacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagag 288  Q
    |||||||||||||||||||| |||||||| |||||  ||||||||||||||||||||||||||||| ||||||||||||    
T  24223061 atacaaacgatgacacaacatgataggaacgaaaagctcatcagtgaggagaaatattagggattgctgcattttagag 24223139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 17079876 - 17079978
Alignment:
Q  190 tctacagaaaaaatagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagagg 289  Q
    |||||||||| |||| |||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||||||||||||    
T  17079876 tctacagaaacaataaatatttacaaacgatgacacaacaggataggaatgaaaagctcatcagtgaggagaaatattaaggattgctgcattttagagg 17079975  T
Q  290 gaa 292  Q
    |||    
T  17079976 gaa 17079978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 195 - 292
Target Start/End: Complemental strand, 12296121 - 12296024
Alignment:
Q  195 agaaaaaatagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagagggaa 292  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  12296121 agaaacaatagatatatacaaacgatgacacaacatgataggaatgaaaagctcatcagtgaggagaaatattagagattgctgcattttagagggaa 12296024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 201 - 292
Target Start/End: Complemental strand, 17201583 - 17201492
Alignment:
Q  201 aatagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagagggaa 292  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||    
T  17201583 aatagttatatacaaacgatgacacaataggataggaatgaaaaactcatcagtgaagagaaatattagggattgctgcattttagagggaa 17201492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 109 - 288
Target Start/End: Original strand, 33482167 - 33482348
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnn--gtctacagaaaaaataga 206  Q
    |||||||||||  ||| | |||||||||||||| |||||||||||||||||||||||||||||||||||             ||| ||| ||| |||| |    
T  33482167 tagccgagtttgaatgaaaattagggtattctggttgtaaacgtattaaataagtgtacaacaacttgtaaaaaaaaaaaaagtcgacataaacaataaa 33482266  T
Q  207 tatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagag 288  Q
    ||||||||||||||||||||||| |||| |||||||||  ||||  ||||||||||||||| ||||||| ||||||||||||    
T  33482267 tatatacaaacgatgacacaacatgataagaatgaaaagctcatatgtgaggagaaatattcgggattgctgcattttagag 33482348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 17203403 - 17203346
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  17203403 tagccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgta 17203346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 17906324 - 17906381
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||    
T  17906324 tagccgagtttgcatggaaattagggtattatgtttgtaaacgtattaaataagtgta 17906381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 17073113 - 17073179
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaactt 175  Q
    |||| |||||| |||| | ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  17073113 tagctgagtttgcatgaaaattagggtattttgtttgtaaatgtattaaataagtgtacaacaactt 17073179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 2970111 - 2970164
Alignment:
Q  83 aaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    |||| |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  2970111 aaactcggtttagggtttgctatatatagccgagtttgcatggaaattagggta 2970164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 23622822 - 23622769
Alignment:
Q  113 cgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||||||||||    
T  23622822 cgagtttgcatggaaattagggtattctttttgtaaacgtattaaataagtgta 23622769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 29202006 - 29201949
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| ||||||||||||||||||||||| |||||||||| ||||    
T  29202006 tagccgagtttgcatggaaattagggtattctgtttgtaaacatattaaataaatgta 29201949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 34294465 - 34294402
Alignment:
Q  103 tatatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||||| || ||||| |||| | ||||||||||||||||||||||| |||||||||||||||    
T  34294465 tatatataaccaagtttgcatgaaaattagggtattctgtttgtaaacatattaaataagtgta 34294402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 809532 - 809475
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||| ||||| |||| | |||| ||||||||||||||||||||||||||||||||||    
T  809532 tagccaagtttgcatgaaaattaaggtattctgtttgtaaacgtattaaataagtgta 809475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 4099815 - 4099872
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||| ||| |||| | ||||||||||| |||||||||||||||||||||||||||    
T  4099815 tagccgaatttgcatgaaaattagggtattttgtttgtaaacgtattaaataagtgta 4099872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 26832041 - 26832098
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||| ||||| |||||| |||| | ||||||||||||||||||||||||||||||||    
T  26832041 tagcctagtttgcatggaaattaagatattctgtttgtaaacgtattaaataagtgta 26832098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 33482085 - 33482142
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    ||||||||||||||||||||||| |||||||||||||| || |||| | |||||||||    
T  33482085 agagaaacacggtttagggtttgttatatatagccgaggttgcatgaaaattagggta 33482142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 23902707 - 23902671
Alignment:
Q  130 tagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||||||||||||||||||||||||||||||||||    
T  23902707 tagggtattctgtttgtaaacgtattaaataagtgta 23902671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 17011476 - 17011438
Alignment:
Q  128 attagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  17011476 attagggtattctgtttgtaaacgtgttaaataagtgta 17011438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 17080453 - 17080412
Alignment:
Q  128 attagggtattctgtttgtaaacgtattaaataagtgtacaa 169  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  17080453 attagggtattttgtttgtaaacgtgttaaataagtgtacaa 17080412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 32208157 - 32208214
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||||||||  ||||| ||||| ||||||| ||||||||||||| |||||||||||    
T  32208157 tagccgagtttgtatggaaattagcgtattctatttgtaaacgtatcaaataagtgta 32208214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 809428 - 809376
Alignment:
Q  114 gagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||| |||| | |||| |||| |||||||||||||||||||||||||||||    
T  809428 gagtttgcatgaaaattaaggtactctgtttgtaaacgtattaaataagtgta 809376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 17080494 - 17080458
Alignment:
Q  130 tagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||| |||||||||||||||||||||||||||    
T  17080494 tagggtattttgtttgtaaacgtattaaataagtgta 17080458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 3671202 - 3671264
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  3671202 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 3671264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 12717879 - 12717817
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  12717879 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 12717817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 12864689 - 12864751
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  12864689 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 12864751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 16958766 - 16958828
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  16958766 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 16958828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 17063380 - 17063426
Alignment:
Q  324 caccaagaaaactcttcagagtttccattaaactttggagcttttcc 370  Q
    ||||||||||||||||| |  | ||||||||||||||||||||||||    
T  17063380 caccaagaaaactcttctggatctccattaaactttggagcttttcc 17063426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 17609502 - 17609440
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||| ||||||||||||||||| || || ||||||||    
T  17609502 ccaccaagaaaactcttctggatctccattgaactttggagcttttccagaatctgatttctt 17609440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 20030964 - 20030902
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  20030964 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 20030902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 25985235 - 25985297
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  25985235 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 25985297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 26035178 - 26035240
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  26035178 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 26035240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 26874560 - 26874622
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  26874560 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 26874622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 27412243 - 27412305
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  27412243 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 27412305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 32302089 - 32302027
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  32302089 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 32302027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 32962989 - 32962927
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  32962989 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 32962927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 34808205 - 34808143
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  34808205 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 34808143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 385
Target Start/End: Complemental strand, 9113534 - 9113474
Alignment:
Q  325 accaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  9113534 accatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 9113474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 385
Target Start/End: Complemental strand, 25725543 - 25725483
Alignment:
Q  325 accaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||| |  | |||||| ||||||||||||||||| || || ||||||||    
T  25725543 accaagaaaactcttctggatctccattgaactttggagcttttccagaatctgatttctt 25725483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 2e-56; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 111 - 292
Target Start/End: Original strand, 16376276 - 16376457
Alignment:
Q  111 gccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnngtctacagaaaaaatagatata 210  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||          |||||  |||| ||||||||||    
T  16376276 gccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcaaaaaaaaaagtctatggaaacaatagatata 16376375  T
Q  211 tacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagagggaa 292  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||| |||| |||||||||||    
T  16376376 tacaaacgatgacacaacatgataggaatgaaaagctcatcagtgaggagaaatattagggattgctgcactttagagggaa 16376457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 109 - 287
Target Start/End: Complemental strand, 41279148 - 41278971
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnngtctacagaaaaaatagata 208  Q
    ||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||          ||||||||||| ||||||||    
T  41279148 tagccgagtttgcatggaaattagggtattctgtttgtaaatgtattaaataagtgtacaacaacttgtcaaaaaaaaaagtctacagaaacaatagata 41279049  T
Q  209 tatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttaga 287  Q
    |||| |||||||||||||||| ||||||||||| |||||||||| |||| | |||||||| || |||||||||||||||    
T  41279048 tatataaacgatgacacaacatgataggaatga-aaaatcatcaatgagaaaaaatattaaggtttgttgcattttaga 41278971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 105 - 292
Target Start/End: Complemental strand, 4455685 - 4455499
Alignment:
Q  105 tatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnn--gtctacagaaaaaa 202  Q
    |||||||| |||||| |||| | ||| || ||||||||||||||||||||||||||| |||||| |||||||||            ||||||||||| ||    
T  4455685 tatatagctgagtttgcatgaaaatt-ggatattctgtttgtaaacgtattaaataaatgtacagcaacttgtcaaaaaaaaaaaagtctacagaaataa 4455587  T
Q  203 tagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagagggaa 292  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||  ||||||||||||||||||||| ||||||||||||||||    
T  4455586 tagatatatacaaacgatgacacaacaggataggaatgaaaaacacatca--gaggagaaatattagggattgctgcattttagagggaa 4455499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 284
Target Start/End: Original strand, 24788578 - 24788751
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnngtctacagaaaaaatagata 208  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||| | || ||| ||||||            |||||||||| ||||||||    
T  24788578 tagccgagtttgcatgaaaattagggtattctgtttgtaaacgtattaaataattttaaaactacttgtaattaaaaaa--tctacagaaacaatagata 24788675  T
Q  209 tatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcatttt 284  Q
    |||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||| ||||| ||||||||    
T  24788676 tatacaaacgataacacaacaggataggaatgaaaagttcatcagtgaggagaaatattagtgattgctgcatttt 24788751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 189 - 292
Target Start/End: Original strand, 34988798 - 34988901
Alignment:
Q  189 gtctacagaaaaaatagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagag 288  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||| |||||||| ||||||| ||||||| |||||||||||     
T  34988798 gtctacagaaacaatagatatatacaaacgatgacacaacaggatatgaatgaaaagctcataagtgaggataaatatttgggattgctgcattttagaa 34988897  T
Q  289 ggaa 292  Q
    ||||    
T  34988898 ggaa 34988901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 5553754 - 5553841
Alignment:
Q  201 aatagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagag 288  Q
    |||||||||||||||||||||| |||||| |||| |||||||||| ||||| ||||| |||||||||| |||||||||||||||||||    
T  5553754 aatagatatatacaaacgatgatacaacaagataagaatgaaaaactcatcggtgagtagaaatattaaggattgttgcattttagag 5553841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 291 - 389
Target Start/End: Original strand, 16408770 - 16408868
Alignment:
Q  291 aaatccatgttatgactatacannnnnnnnnnccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttcttctca 389  Q
    ||||||||||||||||||||||          |||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||    
T  16408770 aaatccatgttatgactatacatatttgttttccaccaagaaaactcttcagggtttccattaaactttggagctttgccagagtcggatttcttctca 16408868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 79 - 166
Target Start/End: Complemental strand, 21224950 - 21224864
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| ||||||||||| |||||||| |  ||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  21224950 agagaaacacg-tttagggtttgatatatataacaaagtttacatggaaattagggtattctgtttgtaaacgtattaaataagtgta 21224864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 16377527 - 16377594
Alignment:
Q  222 acacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagagg 289  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||||||| |||||||||||||    
T  16377527 acacaacaggataggaatgaaaagctcataagtgaggagaaatattagggattgctgcattttagagg 16377594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 22324850 - 22324793
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  22324850 tagccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgta 22324793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 41279204 - 41279147
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  41279204 agagaaacacggtttagggtttgctatatatagccgagtttgcatggaaattagggta 41279147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 16491867 - 16491924
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||    
T  16491867 tagccgagtttgcatggaaattagggtattctgtttgtaaatgtattaaataagtgta 16491924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 111 - 166
Target Start/End: Original strand, 40686416 - 40686471
Alignment:
Q  111 gccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||| |||| | |||||||||||||||||||||||||||||||||||||||    
T  40686416 gccgagtttgcatgaaaattagggtattctgtttgtaaacgtattaaataagtgta 40686471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 46263824 - 46263870
Alignment:
Q  129 ttagggtattctgtttgtaaacgtattaaataagtgtacaacaactt 175  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  46263824 ttagggtattttgtttgtaaacgtattaaataagtgtacaacaactt 46263870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 9396222 - 9396165
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||    
T  9396222 tagccgagtttgcatgaaaattagggtattctatttgtaaacgtattaaataagtgta 9396165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 19222700 - 19222643
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| ||| | |||||||||||||||||||||||||||||||||    
T  19222700 tagccgagtttgcatggaaattggagtattctgtttgtaaacgtattaaataagtgta 19222643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 26454559 - 26454502
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||||| |||||||||    
T  26454559 agagaaacacggtttaaggtttgctatatatagtcgagtttgcatggaaattagggta 26454502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 40449620 - 40449677
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| ||||||||||||||||||||| | |||||||||| |||||||||||    
T  40449620 tagccgagtttgcatggatattagggtattctgctcgtaaacgtataaaataagtgta 40449677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 45419143 - 45419200
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||| | ||||||||||| |||||||||||||||||||||||||||    
T  45419143 tagccgagtttgcatgaaaattagggtattttgtttgtaaacgtattaaataagtgta 45419200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 16376218 - 16376274
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggt 135  Q
    ||||||||| ||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  16376218 agagaaacatggtttagggtttgatatatatagccgagtttgcatggaaattagggt 16376274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 18487790 - 18487714
Alignment:
Q  90 gtttagggtttgctatatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||||| ||| |||||| | || ||||| |||||| ||||| ||||| |||||||||||||||||||||||||||    
T  18487790 gtttagggcttggtatatacaaccaagtttacatggaaattagagtattttgtttgtaaacgtattaaataagtgta 18487714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 166
Target Start/End: Complemental strand, 34838146 - 34838060
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| ||||||| ||| ||| |||| || ||||| |||||| |||| | |||| |||||||||||||||||||||||||||    
T  34838146 agagaaacacg-tttagggcttggtatgtataaccaagtttacatggaaattatgatattttgtttgtaaacgtattaaataagtgta 34838060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 35125233 - 35125195
Alignment:
Q  128 attagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35125233 attagggtattctgtttgtaaacgtattaaataagtgta 35125195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 16376122 - 16376179
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    |||||||||||||||||| ||||||||||||||| |||||| ||| || |||||||||    
T  16376122 agagaaacacggtttaggttttgctatatatagcggagtttgcatagaaattagggta 16376179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 16672108 - 16672051
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||||||||  ||||| ||||||||||| ||||||||||| |||||||||||||||    
T  16672108 tagccgagtttgtatggaaattagggtattatgtttgtaaacatattaaataagtgta 16672051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 17646476 - 17646419
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||||||||  ||||| ||||||||||| ||||||||||| |||||||||||||||    
T  17646476 tagccgagtttgtatggaaattagggtattatgtttgtaaacatattaaataagtgta 17646419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 27712196 - 27712253
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| ||||||||||| ||||| ||||| |||||||||||||||    
T  27712196 tagccgagtttgcatggaaattagggtattttgtttctaaacatattaaataagtgta 27712253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 28170449 - 28170392
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||| |   |||||||||||||||||||||||||||||||||||||    
T  28170449 tagccgagtttgcatgaaatctagggtattctgtttgtaaacgtattaaataagtgta 28170392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 169
Target Start/End: Complemental strand, 4455357 - 4455298
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaa 169  Q
    |||||| |||| |||| | |||||||||| |||||||||||||||||||||||||||||||    
T  4455357 tagccgtgtttgcatgaaaattagggtat-ctgtttgtaaacgtattaaataagtgtacaa 4455298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 11649588 - 11649648
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaa 169  Q
    ||||||||||| |||||| |||| | |||||| |||||||||||||||||||||| |||||    
T  11649588 tagccgagtttgcatggaaattaagatattctatttgtaaacgtattaaataagtatacaa 11649648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 2354271 - 2354329
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgt-aaacgtattaaataagtgta 166  Q
    ||||||||||| |||| | ||||||||||||||||| | ||||||||||||||||||||    
T  2354271 tagccgagtttgcatgaaaattagggtattctgtttttaaaacgtattaaataagtgta 2354329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 21128631 - 21128577
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagt 163  Q
    ||||||||||| |||| | |||| | |||||||||||||||||||||||||||||    
T  21128631 tagccgagtttgcatgaaaattatgatattctgtttgtaaacgtattaaataagt 21128577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 38694698 - 38694802
Alignment:
Q  141 gtttgtaaacgtattaaataagtgtacaacaacttgtc-nnnnnnnnnngtctacagaaaaaatagatatatacaaacgatgacacaacaggataggaat 239  Q
    |||||||||||||||||||||||||||||||| |||||             ||| ||||| | |||||||||||| |||||||||||||| |||||||||    
T  38694698 gtttgtaaacgtattaaataagtgtacaacaatttgtcaaaaaaaaaaaaactatagaaacagtagatatatacagacgatgacacaacatgataggaat 38694797  T
Q  240 gaaaa 244  Q
    |||||    
T  38694798 gaaaa 38694802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 45286028 - 45285979
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaa 158  Q
    ||||||||||| |||| | ||||||||||| |||||||||||||||||||    
T  45286028 tagccgagtttgcatgaaaattagggtattttgtttgtaaacgtattaaa 45285979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 166
Target Start/End: Original strand, 2526805 - 2526836
Alignment:
Q  135 tattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||||||||||||||||||||||||    
T  2526805 tattctgtttgtaaacgtattaaataagtgta 2526836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 370
Target Start/End: Complemental strand, 13175711 - 13175664
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcc 370  Q
    |||||||||||||||||| |  | ||||||||||||||||||||||||    
T  13175711 ccaccaagaaaactcttctggatctccattaaactttggagcttttcc 13175664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 176676 - 176738
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  176676 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 176738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 458103 - 458041
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  458103 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 458041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 1997342 - 1997404
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  1997342 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 1997404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 2706730 - 2706668
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  2706730 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 2706668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 4221794 - 4221856
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  4221794 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 4221856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 6868347 - 6868285
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  6868347 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 6868285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 6878989 - 6878927
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  6878989 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 6878927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 8003183 - 8003121
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  8003183 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 8003121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 8627131 - 8627193
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  8627131 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 8627193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 9094173 - 9094235
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  9094173 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 9094235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 11004365 - 11004427
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  11004365 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 11004427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 11014974 - 11015036
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  11014974 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 11015036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 17951231 - 17951169
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  17951231 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 17951169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 20988843 - 20988905
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  20988843 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 20988905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 24743887 - 24743949
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  24743887 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 24743949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 113
Target Start/End: Original strand, 24787505 - 24787539
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagcc 113  Q
    |||||||||| ||||||||||||||||||||||||    
T  24787505 agagaaacacagtttagggtttgctatatatagcc 24787539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 26391211 - 26391149
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  26391211 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 26391149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 26654453 - 26654391
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  26654453 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 26654391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 40043221 - 40043159
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  40043221 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 40043159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 41279303 - 41279249
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagg 133  Q
    |||||||||||||||||||||||| ||||| || ||||||| |||| | ||||||    
T  41279303 agagaaacacggtttagggtttgcgatataaagtcgagtttgcatgaaaattagg 41279249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 42875634 - 42875696
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  42875634 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 42875696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 11645568 - 11645625
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||||| || |||| | ||||||  ||||||||||||||||||||||| |||||||    
T  11645568 tagccgagcttgcatgaagattaggaaattctgtttgtaaacgtattaaacaagtgta 11645625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 21128686 - 21128630
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    ||||||||||| ||||||||||| |||||||| || ||||| |||||| |||||||||    
T  21128686 agagaaacacg-tttagggtttggtatatataaccaagtttacatggaaattagggta 21128630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 48640546 - 48640603
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||| | |||| | |||||| |||||||| ||||||||||||||||    
T  48640546 tagccgagtttgcatgaaaattatgatattctatttgtaaatgtattaaataagtgta 48640603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 79 - 292
Target Start/End: Original strand, 12243 - 12453
Alignment:
Q  79 agagaaacacggtttag-ggtttgctatatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgt 177  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  12243 agagaaacacggtttaaaggtttgctatatatagccgagtttgcatggaaattagggtattatgtttgtaaacgtattaaataagtgtacaacaagttgt 12342  T
Q  178 cnnnnnnnnnngtctacagaaaaaatagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgtt 277  Q
                  |||| ||| ||||||||||||||||||||||||||||| ||||||||||||||  |||| ||||||||||||||||||||||||||    
T  12343 taaaaaaaag----tacaaaaacaatagatatatacaaacgatgacacaacatgataggaatgaaaagctcataagtgaggagaaatattagggattgtt 12438  T
Q  278 gcattttagagggaa 292  Q
    | |||||||||||||    
T  12439 gtattttagagggaa 12453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 4e-54; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 79 - 292
Target Start/End: Original strand, 25716672 - 25716879
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtc 178  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25716672 agagaaacacggtttagggtttgctatatatagccgagttttcatgtaaattaggatattctgtttgtaaacgtattaaataagtgtacaacaacttgtc 25716771  T
Q  179 nnnnnnnnnngtctacagaaaaaatagatatatacaaacgatgacacaacaggataggaatgaaaa-aatcatcagtgaggagaaatattagggattgtt 277  Q
              ||| ||||||| |||||||||||||     ||||||||||| ||||||||||||||   |||| |||||||||||||||||||||||| |    
T  25716772 --aaaaaaaagtcaacagaaacaatagatatatac-----atgacacaacatgataggaatgaaaagtctcattagtgaggagaaatattagggattgct 25716864  T
Q  278 gcattttagagggaa 292  Q
    |||||||||||||||    
T  25716865 gcattttagagggaa 25716879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 79 - 289
Target Start/End: Original strand, 9240564 - 9240778
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaac---tt 175  Q
    ||||||| ||| |||||| |||||||| ||||||| ||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||   ||    
T  9240564 agagaaatacgatttaggatttgctatttatagccaagtttgcatggaaatttgggtattctgtttgtaaacgtattaaataagtgtacaacaacaactt 9240663  T
Q  176 gtcnnnnnnnnnn-gtctacagaaaaaatagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggatt 274  Q
    ||            ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  9240664 gtaaaaagaaaaaagtctacagaaacaatagatatatacaaacgatgacacaacatgataggaatgaaaaactcatcagtgaggagaaatattagggatt 9240763  T
Q  275 gttgcattttagagg 289  Q
    | |||||||| ||||    
T  9240764 gctgcatttttgagg 9240778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 109 - 289
Target Start/End: Complemental strand, 17756044 - 17755864
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnngtctacagaaaaaatagata 208  Q
    ||||||||||| |||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||||          || |||||||  ||||||||    
T  17756044 tagccgagtttgcatggaaattagggtagtctaattgtaaacgtattaaataagtgtacaacaacttgtcaaaaaaaaaagtgtacagaagcaatagata 17755945  T
Q  209 tatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagagg 289  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  17755944 tatacaaacgatgatacaacaggataggaatgaaaagatcatcagtgaggagaaatattagggattgctgcattttagagg 17755864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 109 - 289
Target Start/End: Complemental strand, 19057364 - 19057184
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnngtctacagaaaaaatagata 208  Q
    ||||||||||| |||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||||          || |||||||  ||||||||    
T  19057364 tagccgagtttgcatggaaattagggtagtctaattgtaaacgtattaaataagtgtacaacaacttgtcaaaaaaaaaagtgtacagaagcaatagata 19057265  T
Q  209 tatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagagg 289  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  19057264 tatacaaacgatgatacaacaggataggaatgaaaagatcatcagtgaggagaaatattagggattgctgcattttagagg 19057184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 109 - 292
Target Start/End: Original strand, 25917232 - 25917414
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnngtctacagaaaaaatagata 208  Q
    ||||||||||| | || | |||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||| ||||||||    
T  25917232 tagccgagtttgcgtgaaaattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcaaaaaaaaa-gtctacagaaacaatagata 25917330  T
Q  209 tatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagagggaa 292  Q
    ||||||||||||||||||||||||||||||||||||  |||| |||| ||| |||||||| |||| |||| |||||||||||||    
T  25917331 tatacaaacgatgacacaacaggataggaatgaaaagctcattagtgtggaaaaatattaaggatggttgtattttagagggaa 25917414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 79 - 289
Target Start/End: Original strand, 9856272 - 9856484
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggtattc-tgtttgtaaacgtattaaat---aagtgtacaacaact 174  Q
    |||||||||  |||||||||||||||||||||||||||||| |||||| ||||||||| ||  ||||||||||| ||| |||   |||||||||||||||    
T  9856272 agagaaacatagtttagggtttgctatatatagccgagtttgcatggaaattagggtagtcgagtttgtaaacgcattcaataagaagtgtacaacaact 9856371  T
Q  175 tgtc---nnnnnnnnnngtctacagaaaaaatagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattaggg 271  Q
    ||||              |||| ||||| ||||||||||||||||||||||||||||| |||| |||||||||  |||||     |||||||||||||||    
T  9856372 tgtcaaaaaaaaaaaaaatctaaagaaacaatagatatatacaaacgatgacacaacatgatatgaatgaaaagctcatc-----ggagaaatattaggg 9856466  T
Q  272 attgttgcattttagagg 289  Q
    ||| ||||||||||||||    
T  9856467 atttttgcattttagagg 9856484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 25938027 - 25937959
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgt 177  Q
    ||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25938027 tagccgaatttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgt 25937959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 2469328 - 2469263
Alignment:
Q  113 cgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtc 178  Q
    ||||||| |||||| |||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  2469328 cgagtttgcatggaaattaaggtagtctatttgtaaacgtattaaataagtgtacaacaacttgtc 2469263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 17756100 - 17756043
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    |||||||| ||||||||||||||||||||||||| |||||| |||||| |||||||||    
T  17756100 agagaaacgcggtttagggtttgctatatatagctgagtttgcatggaaattagggta 17756043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 19057420 - 19057363
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    |||||||| ||||||||||||||||||||||||| |||||| |||||| |||||||||    
T  19057420 agagaaacgcggtttagggtttgctatatatagctgagtttgcatggaaattagggta 19057363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 20876751 - 20876808
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||| | ||||||||||| |||||||||||||||||||||||||||    
T  20876751 tagccgagtttgcatgaaaattagggtattttgtttgtaaacgtattaaataagtgta 20876808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 25917079 - 25917136
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||  |||||||||    
T  25917079 agagaaacacggtttagggtttgctatatatagctgagtttgcatgggaattagggta 25917136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 25938083 - 25938026
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    ||||||||||||||||||||||| ||||||||| ||||||| |||||| |||||||||    
T  25938083 agagaaacacggtttagggtttgttatatatagtcgagtttgcatggaaattagggta 25938026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 38887094 - 38887151
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||| ||||| |||||| ||||||||||| |||||||||||||||||||||||||||    
T  38887094 tagccaagttttcatggaaattagggtattatgtttgtaaacgtattaaataagtgta 38887151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 51654561 - 51654508
Alignment:
Q  113 cgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||| |||||| ||| ||||||||||||| |||||||||||||||||||||    
T  51654561 cgagtttgcatggaaattggggtattctgtttataaacgtattaaataagtgta 51654508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 11523138 - 11523087
Alignment:
Q  113 cgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtg 164  Q
    ||||||| |||| | ||||||||||| |||||||||||||||||||||||||    
T  11523138 cgagtttgcatgaaaattagggtattatgtttgtaaacgtattaaataagtg 11523087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 29934596 - 29934534
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  |||||||| ||||||||||||||||| || || ||||||||    
T  29934596 ccaccaagaaaactcttctggttttccattgaactttggagcttttccagaatcagatttctt 29934534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 29983750 - 29983688
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  |||||||| ||||||||||||||||| || || ||||||||    
T  29983750 ccaccaagaaaactcttctggttttccattgaactttggagcttttccagaatcagatttctt 29983688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 25937906 - 25937861
Alignment:
Q  247 tcatcagtgaggagaaatattagggattgttgcattttagagggaa 292  Q
    |||||||||| |||||||||||||||||| ||||| ||||||||||    
T  25937906 tcatcagtgaagagaaatattagggattgctgcatgttagagggaa 25937861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 35560514 - 35560458
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| ||||| ||||||||||| ||||| |||||||||||||||    
T  35560514 tagccgagtttgcatggaaattagagtattctgttt-taaacttattaaataagtgta 35560458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 47502641 - 47502693
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataa 161  Q
    ||||||||||| |||||| |||||  |||||| ||||||||||||||||||||    
T  47502641 tagccgagtttgcatggaaattagaatattctatttgtaaacgtattaaataa 47502693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 505203 - 505141
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  505203 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 505141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 4753523 - 4753585
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  4753523 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 4753585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 5520072 - 5520134
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  5520072 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 5520134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 5538054 - 5537992
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  5538054 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 5537992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 5580666 - 5580604
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  5580666 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 5580604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 5866729 - 5866667
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  5866729 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 5866667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 8784467 - 8784529
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  8784467 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 8784529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 11273418 - 11273356
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  11273418 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 11273356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 12238650 - 12238588
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| | || ||||||||||||||||||||| || ||||| | ||||||    
T  12238650 ccaccatgaaaactcttctgggtctccattaaactttggagctttaccagagtctgttttctt 12238588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 12288013 - 12287951
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  12288013 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 12287951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 14475425 - 14475487
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  14475425 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 14475487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 385
Target Start/End: Complemental strand, 15652137 - 15652079
Alignment:
Q  327 caagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||| |  | |||||| ||||||||||||||||| ||||| ||||||||    
T  15652137 caagaaaactcttctggatctccattgaactttggagcttttccagagtctgatttctt 15652079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 15848098 - 15848160
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||| ||||||||||||||||| || || ||||||||    
T  15848098 ccaccaagaaaactcttctggatctccattgaactttggagcttttccagaatctgatttctt 15848160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 16392081 - 16392019
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  16392081 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 16392019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 17016979 - 17017041
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||| ||||||||||||||||| || || ||||||||    
T  17016979 ccaccaagaaaactcttctggatctccattgaactttggagcttttccagaatctgatttctt 17017041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 19788226 - 19788288
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  19788226 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 19788288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 20674230 - 20674168
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  20674230 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 20674168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 23767098 - 23767160
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  23767098 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 23767160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 24384551 - 24384489
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  24384551 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 24384489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 24669674 - 24669736
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  24669674 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 24669736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 28315271 - 28315209
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  28315271 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 28315209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 37884783 - 37884845
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  37884783 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 37884845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 38204456 - 38204518
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  38204456 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 38204518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 39381888 - 39381950
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  39381888 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 39381950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 41693453 - 41693515
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  41693453 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 41693515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 244
Target Start/End: Complemental strand, 2469244 - 2469203
Alignment:
Q  203 tagatatatacaaacgatgacacaacaggataggaatgaaaa 244  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||    
T  2469244 tagatatatacaaacgatgacacaatagggtagcaatgaaaa 2469203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 376
Target Start/End: Complemental strand, 9982921 - 9982868
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtc 376  Q
    |||||| ||||||||||| | || ||||||||||||||||||||| || |||||    
T  9982921 ccaccatgaaaactcttctgggtctccattaaactttggagctttaccagagtc 9982868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 13147243 - 13147304
Alignment:
Q  324 caccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    ||||||||||||||||| |  | |||||| ||||||||||||||||| || || ||||||||    
T  13147243 caccaagaaaactcttctggatctccattgaactttggagcttttccagaatctgatttctt 13147304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 25917178 - 25917223
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatg 124  Q
    ||||||||  ||||||||||||||||||||||| ||||||| ||||    
T  25917178 agagaaacgtggtttagggtttgctatatatagtcgagtttgcatg 25917223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 2e-53; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 79 - 288
Target Start/End: Original strand, 41075578 - 41075789
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtaca--acaacttg 176  Q
    |||||||| ||||||||||||||||||| |||||||||||| |||||| ||||| ||||| ||||||||||||||||||||||||||| |  ||||||||    
T  41075578 agagaaacgcggtttagggtttgctatacatagccgagtttgcatggaaattagagtattttgtttgtaaacgtattaaataagtgtatagaacaacttg 41075677  T
Q  177 tcnnnnnnnnnngtctacagaaaaaatagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgt 276  Q
    |           ||||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||  |||||||||| ||||||||||||||||||     
T  41075678 taaaaataaaaagtctacagaaacaatagatatatacaaacggtgacacaacatgataggaatgagaagctcatcagtgaagagaaatattagggattgc 41075777  T
Q  277 tgcattttagag 288  Q
    ||||||||||||    
T  41075778 tgcattttagag 41075789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 115 - 292
Target Start/End: Original strand, 17930274 - 17930453
Alignment:
Q  115 agtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnng--tctacagaaaaaatagatatata 212  Q
    ||||| |||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||          |  |||||||||| ||||||||||||    
T  17930274 agtttgcatgaaaattagggtattatgtttgtaaacgtattaaataagtgtacaacaacttgtcaaaaaaaaaagagtctacagaaacaatagatatata 17930373  T
Q  213 caaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagagggaa 292  Q
    ||||||||||||||| | ||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||    
T  17930374 caaacgatgacacaataagataggaatgaaaagctcatcagtgaggagaaatattagggattgctgcattttagagggaa 17930453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 109 - 290
Target Start/End: Original strand, 15256359 - 15256534
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnngtctacagaaaaaatagata 208  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||          ||||||||||| ||||||||    
T  15256359 tagccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgtacaataacttgtcaagaaaaa--gtctacagaaacaatagata 15256456  T
Q  209 tatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagaggg 290  Q
    ||||||||||||||||||    ||||||||||||||  |||||||||||||||||||||||| |||| ||||||||||||||    
T  15256457 tatacaaacgatgacaca----gataggaatgaaaagctcatcagtgaggagaaatattaggaattgctgcattttagaggg 15256534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 109 - 292
Target Start/End: Complemental strand, 11131554 - 11131372
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnngtctacagaaaaaatagata 208  Q
    ||||||||||| |||| | ||||||||||| |||||||||||||||||||||||||||||| |||||||           ||||||| ||| |||| |||    
T  11131554 tagccgagtttgcatgaaaattagggtattttgtttgtaaacgtattaaataagtgtacaataacttgt-aaaaaaaaaagtctacataaacaataaata 11131456  T
Q  209 tatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagagggaa 292  Q
    ||||||||||||||||||||| ||||||||||||||| | || |||||||||||||||||||||||| ||||||||||||||||    
T  11131455 tatacaaacgatgacacaacatgataggaatgaaaaacttattagtgaggagaaatattagggattgctgcattttagagggaa 11131372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 103 - 288
Target Start/End: Original strand, 41075885 - 41076072
Alignment:
Q  103 tatatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta--caacaacttgtcnnnnnnnnnngtctacagaaaa 200  Q
    |||| |||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||  |||||||||||           |||| ||||||     
T  41075885 tatacatagccgagtttgcatggaaattagggtattctgtttgcaaacgtattaaataagtgtatacaacaacttgtaaaaataaaaagtctgcagaaac 41075984  T
Q  201 aatagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagag 288  Q
    |||||||||||||||||| |||||||||| ||||||||||| ||  |||||||||| |||||||||||||||||| ||||||||||||    
T  41075985 aatagatatatacaaacggtgacacaacatgataggaatgagaagctcatcagtgaagagaaatattagggattgctgcattttagag 41076072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 103 - 288
Target Start/End: Original strand, 41076167 - 41076354
Alignment:
Q  103 tatatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta--caacaacttgtcnnnnnnnnnngtctacagaaaa 200  Q
    |||| |||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||  |||||||||||           |||| ||||||     
T  41076167 tatacatagccgagtttgcatggaaattagggtattctgtttgcaaacgtattaaataagtgtatacaacaacttgtaaaaataaaaagtctgcagaaac 41076266  T
Q  201 aatagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagag 288  Q
    |||||||||||||||||| |||||||||| ||||||||||| ||  |||||||||| |||||||||||||||||| ||||||||||||    
T  41076267 aatagatatatacaaacggtgacacaacatgataggaatgagaagctcatcagtgaagagaaatattagggattgctgcattttagag 41076354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 113 - 292
Target Start/End: Original strand, 27351841 - 27352023
Alignment:
Q  113 cgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnn-----gtctacagaaaaaatagat 207  Q
    ||||||| |||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||               ||||||||||| |||||||    
T  27351841 cgagtttgcataaatattagggtattctgtttgtaaatgtattaaataagtgtacaacaacttgtcaaaaaaaaaaaaaaagtctacagaaacaatagat 27351940  T
Q  208 atatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagagggaa 292  Q
    ||||||||| |||||||  ||| ||||||||||||||  ||||||||||||||||||||||| ||||| | ||||||||||||||    
T  27351941 atatacaaaagatgaca--acatgataggaatgaaaagctcatcagtgaggagaaatattagagattgctacattttagagggaa 27352023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 189 - 286
Target Start/End: Original strand, 15783008 - 15783108
Alignment:
Q  189 gtctacagaaaaaatagatatatacaaacgatgacacaacaggataggaatgaaaaaa---tcatcagtgaggagaaatattagggattgttgcatttta 285  Q
    ||||||||||| ||||||||||||||||  |||||| |||||||||||||||||||||   |||||||||||||||||||||| |||||| |||||||||    
T  15783008 gtctacagaaacaatagatatatacaaataatgacaaaacaggataggaatgaaaaaaagctcatcagtgaggagaaatattaaggattgctgcatttta 15783107  T
Q  286 g 286  Q
    |    
T  15783108 g 15783108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 192 - 285
Target Start/End: Original strand, 38857683 - 38857775
Alignment:
Q  192 tacagaaaaaatagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcatttta 285  Q
    |||||||| ||||||| ||||||| |||| |||||||| ||||||||||||||  |||| | ||||||||||||||||||||||||||||||||    
T  38857683 tacagaaacaatagatctatacaatcgat-acacaacatgataggaatgaaaatctcattattgaggagaaatattagggattgttgcatttta 38857775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 15253508 - 15253573
Alignment:
Q  113 cgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtc 178  Q
    ||||||| |||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  15253508 cgagtttgcatggaaattaaggtattctatttgtaaacgtattaaataagtgtacaacaacttgtc 15253573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 24129642 - 24129578
Alignment:
Q  114 gagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtc 178  Q
    |||||| |||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  24129642 gagtttgcatggaaattagagtattctgtttgtaaacatattaaataagtgtacaacaacttgtc 24129578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 11658066 - 11658009
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||    
T  11658066 tagccgagtttgcatggaaattagagtattctgtttgtaaacgtattaaataagtgta 11658009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 15256303 - 15256360
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||    
T  15256303 agagaaacacggtttagggtttgctatatatagccaagtttgcatggaaattagggta 15256360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 20641338 - 20641395
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||    
T  20641338 tagccgagtttgcatgaaaattagggtattctgtttgtaaacgtattaaataagtgta 20641395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 41326987 - 41326930
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||    
T  41326987 tagccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataattgta 41326930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 14336084 - 14336141
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||||||||||| |||||    
T  14336084 tagccgagtttgcatggaaattagagtattctgtttgtaaacgtattaaatatgtgta 14336141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 44256940 - 44256883
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||||    
T  44256940 tagccgagtttgcatggaaattagggtattctatttgtaaacatattaaataagtgta 44256883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 20709418 - 20709366
Alignment:
Q  114 gagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||| |||| | |||||||||||||||||||||||||||||||||||||||    
T  20709418 gagtttgcatgaaaattagggtattctgtttgtaaacgtattaaataagtgta 20709366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 15256214 - 15256261
Alignment:
Q  89 ggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||    
T  15256214 ggtttagggtttgctatatatagccgagtttgcatggaaattagggta 15256261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 17930212 - 17930269
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    ||||||||| |||||||||||| ||||||||| |||||||| |||||| |||||||||    
T  17930212 agagaaacatggtttagggttttctatatatatccgagtttgcatggaaattagggta 17930269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 27351781 - 27351838
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    |||||||||||  ||||||||| |||||||||||||||||| |||||| |||||||||    
T  27351781 agagaaacacgcattagggtttactatatatagccgagtttgcatggaaattagggta 27351838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 29550589 - 29550533
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| || ||||||||||||||||||||||||||||||| ||||    
T  29550589 tagccgagtttgcatgga-atcagggtattctgtttgtaaacgtattaaataaatgta 29550533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 41995281 - 41995338
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||| ||||| |||||| |||||  ||||||||||||||||||||||||||||||||    
T  41995281 tagccaagtttgcatggaaattagattattctgtttgtaaacgtattaaataagtgta 41995338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 15253637 - 15253720
Alignment:
Q  206 atatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgca-ttttagagggaa 292  Q
    ||||| ||||||||||||||||    |||||||||||||  |||  ||||||||||||||||| |||||| |||| ||||||||||||    
T  15253637 atatacacaaacgatgacacaa----ataggaatgaaaagctcaaaagtgaggagaaatattatggattgctgcatttttagagggaa 15253720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 10129048 - 10129101
Alignment:
Q  113 cgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||| |||||| |||| ||||||||||| |||||| |||||||||||||||    
T  10129048 cgagtttgcatggaaattaaggtattctgttcgtaaacatattaaataagtgta 10129101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 11736616 - 11736563
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataag 162  Q
    ||||||||||| |||| | |||| |||||||||||||||||||||| |||||||    
T  11736616 tagccgagtttgcatgaaaattacggtattctgtttgtaaacgtatcaaataag 11736563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 12898494 - 12898437
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||| | ||||||||||||| ||| |||||||||||||||| ||||    
T  12898494 tagccgagtttgcatgaaaattagggtattctatttctaaacgtattaaataattgta 12898437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 15253448 - 15253505
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    |||||||||||||||||||||||||||| |||| ||||||| ||| || |||| ||||    
T  15253448 agagaaacacggtttagggtttgctatacatagtcgagtttgcatcgaaattatggta 15253505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 41327042 - 41326986
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    ||||||||||| ||||||| ||| ||||||||||||||||| |||||| |||||||||    
T  41327042 agagaaacacg-tttagggcttggtatatatagccgagtttgcatggaaattagggta 41326986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 4219655 - 4219717
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  4219655 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 4219717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 9898626 - 9898564
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  9898626 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 9898564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 10276746 - 10276808
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  10276746 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 10276808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 11396225 - 11396163
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  11396225 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 11396163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 22915913 - 22915851
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  22915913 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 22915851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 24328802 - 24328740
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  24328802 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 24328740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 24802704 - 24802642
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||| ||||||||||||||||| || || ||||||||    
T  24802704 ccaccaagaaaactcttctggatctccattgaactttggagcttttccagaatctgatttctt 24802642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 29253979 - 29254041
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  29253979 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 29254041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 35262763 - 35262825
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  35262763 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 35262825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 35273388 - 35273450
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  35273388 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 35273450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 37131016 - 37131074
Alignment:
Q  108 atagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||| ||||| |||| | ||||||||||| | ||||||||| |||||||||||||||    
T  37131016 atagccaagtttgcatgcaaattagggtattatatttgtaaacatattaaataagtgta 37131074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 39171147 - 39171085
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  39171147 ccaccatgaaaactcttctggatatccattaaactttggagcttttccagagtctgttttctt 39171085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 40250368 - 40250430
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  40250368 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 40250430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 43092438 - 43092500
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  43092438 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 43092500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 43354189 - 43354251
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  43354189 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 43354251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 367
Target Start/End: Original strand, 20567215 - 20567259
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttt 367  Q
    |||||| ||||| |||||||  |||||||||||||||||||||||    
T  20567215 ccaccacgaaaattcttcaggatttccattaaactttggagcttt 20567259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 112 - 285
Target Start/End: Original strand, 31249157 - 31249327
Alignment:
Q  112 ccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnngtctacagaaaaaatagatatat 211  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||           || |||||||| |||||||||||    
T  31249157 ccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgtacaacaatttgt---aaaaaaaagtatacagaaacaatagatatat 31249253  T
Q  212 acaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcatttta 285  Q
    |||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||| |||||||||    
T  31249254 acaaacgatgacacaacaggataggaatgaaaagctcataagtgaggagaaatattagggattgctgcatttta 31249327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 79 - 292
Target Start/End: Original strand, 13461639 - 13461840
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtc 178  Q
    ||||||||| ||| ||||||||| ||||||||||||||||| |||||| ||||||||||||  ||| |||| ||||||||||||||||||||||||| ||    
T  13461639 agagaaacatggtatagggtttg-tatatatagccgagtttacatggaaattagggtattcattttttaaatgtattaaataagtgtacaacaacttatc 13461737  T
Q  179 nnnnnnnnnngtctacagaaaa---aatagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattg 275  Q
                  | | ||||   ||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||    
T  13461738 --------------aaaaaaaagtcaatagatatatacaaacaatgacacaacatgataggaatgaaaaactcatgagtgaggagaaatattagggattg 13461823  T
Q  276 ttgcattttagagggaa 292  Q
    |||||||||||||||||    
T  13461824 ttgcattttagagggaa 13461840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 109 - 292
Target Start/End: Original strand, 38294775 - 38294945
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnngtctacagaaaaaatagata 208  Q
    ||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||| || ||                ||||||| ||| ||||||||    
T  38294775 tagccgagtttgcatagaaattagggtattctgtttgtaaacgtattaaataagtgtaaaaaaa-------------aaagtctacataaacaatagata 38294861  T
Q  209 tatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagagggaa 292  Q
    |||||||||||||||||||||| ||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||    
T  38294862 tatacaaacgatgacacaacagaatatgaatgaaaagttcatcagtgaggagaaatattagggattgctgcattttagagggaa 38294945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 165
Target Start/End: Original strand, 27853190 - 27853265
Alignment:
Q  90 gtttagggtttgctatatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgt 165  Q
    |||||||| ||| |||||||| || ||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  27853190 gtttagggcttggtatatataaccaagtttacatggaaattagggtattctgtttgtaaacgtattaaataagtgt 27853265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 30206347 - 30206290
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  30206347 tagccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgta 30206290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 39616865 - 39616931
Alignment:
Q  207 tatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggat 273  Q
    |||||| |||||||||||||||| ||| ||||||||||  |||||||||||||||||||||||||||    
T  39616865 tatatataaacgatgacacaacatgatgggaatgaaaagctcatcagtgaggagaaatattagggat 39616931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 3990658 - 3990601
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||    
T  3990658 tagccgagtttgcatgaaaattagggtattctgtttgtaaacgtattaaataagtgta 3990601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 13797803 - 13797746
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||||||||||||||    
T  13797803 tagccgagtttgcatggaaattagtatattctgtttgtaaacgtattaaataagtgta 13797746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 30437633 - 30437690
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| |||| |||||| |||||||||||||||||||||||||||    
T  30437633 tagccgagtttgcatggaaattatggtattttgtttgtaaacgtattaaataagtgta 30437690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 38294721 - 38294776
Alignment:
Q  81 agaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    ||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||    
T  38294721 agaaacacggtttagggtttgctatatatagtcgagtttgtatggaaattagggta 38294776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 21297928 - 21297990
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    ||||||||||||||||||||| | |||||| ||||||||||||||||| || || ||||||||    
T  21297928 ccaccaagaaaactcttcagaatctccattgaactttggagcttttccagaatctgatttctt 21297990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 44014942 - 44014885
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||| ||||| |||||| ||||||||||||| |||||||||||||| ||||||||||    
T  44014942 tagccaagtttgcatggaaattagggtattctatttgtaaacgtatttaataagtgta 44014885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 23086244 - 23086188
Alignment:
Q  110 agccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||||||| |||| | ||||||||||| ||||||||| |||||||||||||||||    
T  23086244 agccgagtttgcatgaaaattagggtattatgtttgtaagcgtattaaataagtgta 23086188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 166
Target Start/End: Original strand, 1276400 - 1276435
Alignment:
Q  131 agggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||||||||||||||||||||||||||||    
T  1276400 agggtattctgtttgtaaacgtattaaataagtgta 1276435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 30315793 - 30315731
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| || | |||||||||||||||||||||||| ||||| | ||||||    
T  30315793 ccaccatgaaaactcttctgaatctccattaaactttggagcttttccagagtctgttttctt 30315731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 45569101 - 45569039
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    ||||||||||||||||||||  | |||||| ||||||||||||||||| || || ||||||||    
T  45569101 ccaccaagaaaactcttcaggatctccattgaactttggagcttttccagaatctgatttctt 45569039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 9389331 - 9389282
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaa 158  Q
    ||||||||||| |||| | ||||||||||||| |||||||||||||||||    
T  9389331 tagccgagtttgcatgaaaattagggtattctatttgtaaacgtattaaa 9389282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 14683254 - 14683209
Alignment:
Q  121 catggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||| |||||| |||||||||||||||| |||||||||||||||    
T  14683254 catggaaattaggatattctgtttgtaaacatattaaataagtgta 14683209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 23960175 - 23960219
Alignment:
Q  122 atggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||| ||||||||||| ||||||||||||||||||||| |||||    
T  23960175 atggaaattagggtattatgtttgtaaacgtattaaatacgtgta 23960219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 31249105 - 31249153
Alignment:
Q  86 cacggtttagggtttgctatatatagccgagtttccatggatattaggg 134  Q
    |||||||||||||||||||||||||||||| ||  |||||| |||||||    
T  31249105 cacggtttagggtttgctatatatagccgacttcgcatggaaattaggg 31249153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 251613 - 251675
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  251613 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 251675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 814714 - 814776
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  814714 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 814776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 850043 - 849981
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  850043 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 849981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 3349703 - 3349641
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  3349703 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 3349641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 9367499 - 9367561
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  9367499 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 9367561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 13689638 - 13689576
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  13689638 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 13689576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 19138484 - 19138546
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  19138484 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 19138546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 29075945 - 29076007
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  29075945 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 29076007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 29086196 - 29086258
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  29086196 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 29086258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 31249040 - 31249086
Alignment:
Q  90 gtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    |||||||||||| ||||||||||||| ||| |||||| |||||||||    
T  31249040 gtttagggtttgttatatatagccgattttgcatggaaattagggta 31249086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 32078764 - 32078702
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  32078764 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 32078702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 34948072 - 34948022
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaat 159  Q
    ||||||||||| |||| | |||| | |||||||||||||||||||||||||    
T  34948072 tagccgagtttgcatgaaaattatgatattctgtttgtaaacgtattaaat 34948022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 36087727 - 36087789
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  36087727 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 36087789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 36302731 - 36302793
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  36302731 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 36302793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 44490919 - 44490981
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  44490919 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 44490981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 375
Target Start/End: Original strand, 19428127 - 19428179
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagt 375  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||    
T  19428127 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagt 19428179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 113 - 292
Target Start/End: Complemental strand, 7779754 - 7779576
Alignment:
Q  113 cgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnngtctacagaaaaaatagatatata 212  Q
    ||||||| |||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| |           ||||||| ||| ||||||||||||    
T  7779754 cgagtttgcatggaaattagggtattctgtttgtaaaagtattaa-taagtgtacaacaacttataaaaaaaaaaagtctacaaaaacaatagatatata 7779656  T
Q  213 caaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagagggaa 292  Q
    |||||||||||||||||  ||| |||||||||  |||| |||||||||||||||||||||||||||||||||||||||||    
T  7779655 caaacgatgacacaacaatatatgaatgaaaagctcattagtgaggagaaatattagggattgttgcattttagagggaa 7779576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 109 - 294
Target Start/End: Complemental strand, 14854560 - 14854375
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtcnnnnnnnnnn-gtctacagaaaaaatagat 207  Q
    ||||||||||| |||||| |||| |||||| |||||||||||||||||||||||||||||| ||||||||           ||||||| ||| |||||||    
T  14854560 tagccgagtttgcatggaaattaaggtattttgtttgtaaacgtattaaataagtgtacaataacttgtcaaaaaaaaaaagtctacataaacaatagat 14854461  T
Q  208 atatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagagggaaat 294  Q
    |||||||||||||||||||||| ||||||||||||||  |||| ||  | ||||||||||||||||||  |||||||||||||||||    
T  14854460 atatacaaacgatgacacaacaagataggaatgaaaagctcat-agcaaagagaaatattagggattgcagcattttagagggaaat 14854375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 79 - 292
Target Start/End: Complemental strand, 3433302 - 3433087
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggtattct-gtttgtaaacgtattaaataagtgtacaacaacttgt 177  Q
    |||||||||||||||| ||||||| ||||||| |||||||| |||||| ||||| |||  |  |||||||||||||| ||||||||||||||||||||||    
T  3433302 agagaaacacggtttatggtttgcaatatatacccgagtttgcatggacattagagtagccgagtttgtaaacgtatcaaataagtgtacaacaacttgt 3433203  T
Q  178 cnnnnnnnnnng-tctacagaaaaaatagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgt 276  Q
                 |||||||||| | ||||||||||||||||||||||||||| |||| ||| |||||  ||| |||||||||||||||  ||||| |||    
T  3433202 aaaaaaaaaaaaatctacagaaacagtagatatatacaaacgatgacacaacatgatatgaacgaaaagctcaccagtgaggagaaataccagggactgt 3433103  T
Q  277 tgcattttagagggaa 292  Q
    |||||||||| |||||    
T  3433102 tgcattttagtgggaa 3433087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 109 - 168
Target Start/End: Complemental strand, 5398249 - 5398190
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtaca 168  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  5398249 tagccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtttaca 5398190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 19322630 - 19322567
Alignment:
Q  103 tatatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||||| || | ||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  19322630 tatatataaccaaatttacatggaaattagggtattctgtttgtaaacgtattaaataagtgta 19322567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 9487587 - 9487641
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagt 163  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||    
T  9487587 tagccgagtttgcatggaaattagggcattctgtttgtaaacgtattaaataagt 9487641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 7128064 - 7128007
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| ||| || ||||| |||||||||||||||||||||||||||||||||    
T  7128064 tagccgagtttgcatagaaattagagtattctgtttgtaaacgtattaaataagtgta 7128007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 23141104 - 23141052
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataa 161  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  23141104 tagccgagtttgcatggaaattagtgtattctgtttgtaaacgtattaaataa 23141052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 13104839 - 13104893
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagt 163  Q
    ||||||| ||| |||||| |||||||||||||||||||||| |||||||||||||    
T  13104839 tagccgaatttgcatggaaattagggtattctgtttgtaaaagtattaaataagt 13104893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 16305931 - 16305877
Alignment:
Q  112 ccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||||| |||||| |||| |||||||||||| |||||||||||||||||||||    
T  16305931 ccgagtttgcatggaaattaaggtattctgtttataaacgtattaaataagtgta 16305877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 5398305 - 5398248
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    ||||||||| ||||||||||||||||||||||| ||||||| ||| || |||||||||    
T  5398305 agagaaacatggtttagggtttgctatatatagtcgagtttgcatagaaattagggta 5398248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 19122761 - 19122705
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| ||||||||||| ||||||| |||||||||||||||||||    
T  19122761 tagccgagtttgcatggaaattagggtattttgtttgt-aacgtattaaataagtgta 19122705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 41092501 - 41092554
Alignment:
Q  113 cgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||| |||||| ||||| | |||||||||||||||||||||||||||||||    
T  41092501 cgagtttgcatggaaattagagcattctgtttgtaaacgtattaaataagtgta 41092554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 11209151 - 11209089
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    ||||||||||||||||||||  | |||||| ||||||||||||||||  ||||| ||||||||    
T  11209151 ccaccaagaaaactcttcaggatctccattgaactttggagcttttctagagtctgatttctt 11209089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 12441878 - 12441932
Alignment:
Q  112 ccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||| ||| |||||| |||||| |||| |||||||||||||||||||||||||||    
T  12441878 ccgaatttgcatggaaattaggatattatgtttgtaaacgtattaaataagtgta 12441932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 25113054 - 25112992
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    ||||||||| ||||||||||  | |||||| ||||||||||||||||| ||||| ||||||||    
T  25113054 ccaccaagagaactcttcaggatctccattgaactttggagcttttccagagtctgatttctt 25112992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 25172145 - 25172083
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    ||||||||| ||||||||||  | |||||| ||||||||||||||||| ||||| ||||||||    
T  25172145 ccaccaagagaactcttcaggatctccattgaactttggagcttttccagagtctgatttctt 25172083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 14854616 - 14854559
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    ||||||||| |||||| |||||||||||||||| ||||||| |||| | |||||||||    
T  14854616 agagaaacatggtttacggtttgctatatatagtcgagtttgcatgaaaattagggta 14854559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 14854710 - 14854653
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    ||||||| | ||||||||||||||||||||| ||||||||| |||| | |||||||||    
T  14854710 agagaaatatggtttagggtttgctatatatcgccgagtttgcatgaaaattagggta 14854653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 166
Target Start/End: Original strand, 31486587 - 31486667
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||||||||||| ||| ||||||| ||| ||||| |||||| ||||||       ||||||||| ||||||||||||||||    
T  31486587 agagaaacacggtttagggcttggtatatatcgccaagtttacatggaaattagg-------gtttgtaaatgtattaaataagtgta 31486667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 41511513 - 41511457
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| |||||| |||||||||| |||| ||||||||||||||||    
T  41511513 tagccgagtttgcatggaaattagg-tattctgtttttaaaagtattaaataagtgta 41511457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 7779812 - 7779757
Alignment:
Q  81 agaaacacggtttagggtttgctatatatagccgagtttccatggatattagggta 136  Q
    ||||||||||||||| ||||| |||||||| |||||||| |||| | |||||||||    
T  7779812 agaaacacggtttagagtttgttatatatatccgagtttgcatgaaaattagggta 7779757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 1121007 - 1121069
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  1121007 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 1121069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 5300247 - 5300309
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  5300247 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 5300309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 6976962 - 6976900
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  6976962 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 6976900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 9337110 - 9337048
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  9337110 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 9337048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 14031198 - 14031136
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  14031198 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 14031136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 14456717 - 14456779
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  14456717 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 14456779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 14567758 - 14567820
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  14567758 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 14567820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 15741125 - 15741063
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  15741125 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 15741063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 16003001 - 16003063
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  16003001 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 16003063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 17608218 - 17608156
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  17608218 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 17608156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 17720074 - 17720012
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  17720074 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 17720012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 19465128 - 19465066
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  19465128 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 19465066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 22677272 - 22677210
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  22677272 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 22677210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 23297433 - 23297371
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  23297433 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 23297371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 23363266 - 23363204
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  23363266 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 23363204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 23697936 - 23697874
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  23697936 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 23697874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 24568244 - 24568182
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  24568244 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 24568182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 24809072 - 24809010
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  24809072 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 24809010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 24826580 - 24826642
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  24826580 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 24826642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 27051942 - 27052004
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  27051942 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 27052004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 27461318 - 27461256
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  27461318 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 27461256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 27621877 - 27621939
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  27621877 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 27621939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 30237131 - 30237193
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  30237131 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 30237193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 31349690 - 31349628
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  31349690 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 31349628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 31834636 - 31834574
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  31834636 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 31834574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 34773065 - 34773003
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  34773065 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 34773003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 35216659 - 35216597
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  35216659 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 35216597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 36592222 - 36592284
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  36592222 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 36592284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 36688854 - 36688792
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  36688854 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 36688792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 37739672 - 37739734
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  37739672 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 37739734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 38110396 - 38110358
Alignment:
Q  128 attagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  38110396 attatggtattctgtttgtaaacgtattaaatatgtgta 38110358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 39353652 - 39353590
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  39353652 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 39353590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 40391514 - 40391452
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  40391514 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 40391452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 42043936 - 42043874
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  42043936 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 42043874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 38004268 - 38004325
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||| |||||| |||||| | ||||| |||||  ||||||||||||||||||||||||    
T  38004268 tagctgagtttgcatggaaagtagggcattctaattgtaaacgtattaaataagtgta 38004325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 24982515 - 24982575
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttc 383  Q
    |||||| ||||||||||| |  | |||||| ||||||||||||||||| ||||| ||||||    
T  24982515 ccaccatgaaaactcttctggatctccattgaactttggagcttttccagagtctgatttc 24982575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 8e-37; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 79 - 243
Target Start/End: Complemental strand, 9711549 - 9711386
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtc 178  Q
    ||||||||||||||||||||||||||||||||| | ||||| |||||| ||||| ||||| ||||||||||||||||||||||||||| ||||||||||     
T  9711549 agagaaacacggtttagggtttgctatatatagtcaagtttgcatggaaattagagtattatgtttgtaaacgtattaaataagtgtaaaacaacttgt- 9711451  T
Q  179 nnnnnnnnnngtctacagaaaaaatagatatatacaaacgatgacacaacaggataggaatgaaa 243  Q
              ||||||| ||| ||||||||||||||| ||||||||||||| ||||| |||||||    
T  9711450 aaaaataaaagtctacataaacaatagatatatacaagcgatgacacaacaagatagaaatgaaa 9711386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 189 - 292
Target Start/End: Complemental strand, 19553497 - 19553394
Alignment:
Q  189 gtctacagaaaaaatagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagag 288  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||    
T  19553497 gtctacagaaacaatagatatatacaaacgatgaaacaacaggataagaatgaaaaattcatcggtgagaagaaatattagggattgctgcattttagag 19553398  T
Q  289 ggaa 292  Q
    ||||    
T  19553397 ggaa 19553394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 290
Target Start/End: Original strand, 11874760 - 11874991
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggtattc-tgtttgtaaacgtattaaataagtgtacaacaacttgt 177  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||| | |||  |  |||||||||||||||||||| ||||||||||||||||    
T  11874760 agagaaacacggtttagggtttgctatatatagccgagtttgcatggaaattggtgtagccgagtttgtaaacgtattaaatatgtgtacaacaacttgt 11874859  T
Q  178 c--nnnnnnnnnngtctacagaaaaaatagatatatacaaacg-----------------atgacacaacaggataggaatgaaaaaatcatcagtgagg 258  Q
    |            |||||| |||| |||||||||||| |||||                 |||||||||||||||||||||| |||  ||||||||||||    
T  11874860 caaaaaaaaaaaagtctacggaaacaatagatatatataaacgatcacacaacaggatagatgacacaacaggataggaatggaaatctcatcagtgagg 11874959  T
Q  259 agaaatattagggattgttgcattttagaggg 290  Q
    ||||||||||||||||| ||||||||||||||    
T  11874960 agaaatattagggattgctgcattttagaggg 11874991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 79 - 227
Target Start/End: Original strand, 29013640 - 29013787
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagtttccatggatattagggtattctgt-ttgtaaacgtattaaataagtgtacaacaacttgt 177  Q
    |||||||||||||||||||||| |||||||||||||||||| ||| || |||||||||    || ||||||||||||||||||| ||||||| ||||| |    
T  29013640 agagaaacacggtttagggtttactatatatagccgagtttgcatagaaattagggtagctggtattgtaaacgtattaaataaatgtacaataacttat 29013739  T
Q  178 cnnnnnnnnnngtctacagaaaaaatagatatatacaaacgatgacacaa 227  Q
               ||||||||||| |||| ||||||||||||||||||||||    
T  29013740 --aaaaaaaaagtctacagaaacaataaatatatacaaacgatgacacaa 29013787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 7822128 - 7822070
Alignment:
Q  108 atagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  7822128 atagccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgta 7822070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 178
Target Start/End: Original strand, 24389736 - 24389805
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaacttgtc 178  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  24389736 tagccgagtttgcatgaaaattagggtattctgtttgtaaacatattaaataagtgtacaccaacttgtc 24389805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 53144347 - 53144404
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  53144347 tagccgagtttgcatggaaattagggtattctgtttgtaaacgtattaaataagtgta 53144404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 22293501 - 22293443
Alignment:
Q  108 atagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||    
T  22293501 atagccgagtttgcatagaaattagggtattctgtttgtaaacgtattaaataagtgta 22293443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 24050206 - 24050148
Alignment:
Q  108 atagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||    
T  24050206 atagccgagtttgcatgaaaattagggtattctgtttgtaaacgtattaaataagtgta 24050148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 7797876 - 7797819
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||    
T  7797876 tagccgagtttgcattgaaattagggtattctgtttgtaaacgtattaaataagtgta 7797819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 28379557 - 28379614
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||    
T  28379557 tagccgagtttgcatgaaaattagggtattctgtttgtaaacgtattaaataagtgta 28379614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 28813736 - 28813679
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||    
T  28813736 tagccgagtttgcatggaaattaaggtattctgtttgtaaacgtattaaataagtgta 28813679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 54653171 - 54653228
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||    
T  54653171 tagccgagtttgcatggaaattagggtattctggttgtaaacgtattaaataagtgta 54653228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 33117297 - 33117395
Alignment:
Q  190 tctacagaaaaaatagatatatacaaacgatgacacaacaggataggaatgaaaaaatcatcagtgaggagaaatattagggattgttgcattttagag 288  Q
    |||||||||| |||| ||||||||||||||| || ||| | ||||||||||||||  | || |||||| | ||||||||| ||||| ||||||||||||    
T  33117297 tctacagaaacaataaatatatacaaacgataacgcaatatgataggaatgaaaagcttattagtgagaataaatattagagattgctgcattttagag 33117395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 2177649 - 2177592
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||||| | ||||||||||||||| |||||||||||||||||||||    
T  2177649 tagccgagtttgcatggaaaatagggtattctgtttataaacgtattaaataagtgta 2177592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 8119121 - 8119064
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||| | |||| ||||||||||||||||||||||||||||||||||    
T  8119121 tagccgagtttgcatgaaaattaaggtattctgtttgtaaacgtattaaataagtgta 8119064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 18001810 - 18001867
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||| |||| |||| | |||||||||||||||||||||||||||||||||||||||    
T  18001810 tagccgtgtttgcatgaaaattagggtattctgtttgtaaacgtattaaataagtgta 18001867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 172
Target Start/End: Complemental strand, 2527271 - 2527208
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaacaa 172  Q
    ||||||||||| |||| | |||||| |||| |||||||||| ||||||||||||||||||||||    
T  2527271 tagccgagtttgcatgaaaattaggatattttgtttgtaaatgtattaaataagtgtacaacaa 2527208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 4942214 - 4942157
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||| | |||||||||| |||||||||||||||||||| |||||||    
T  4942214 tagccgagtttgcatgaaaattagggtatactgtttgtaaacgtattaaacaagtgta 4942157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 8478743 - 8478800
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||| |||| |||||| |||| |||||||||||| |||||||||||||||||||||    
T  8478743 tagccgggtttgcatggaaattaaggtattctgtttataaacgtattaaataagtgta 8478800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 12899987 - 12899930
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||| | ||||||| | |||||||||||||||||||||||||||||    
T  12899987 tagccgagtttgcatgaaaattagggcaatctgtttgtaaacgtattaaataagtgta 12899930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 7812649 - 7812605
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgta 153  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||    
T  7812649 tagccgagtttgcatggaaattagggtattctgtttgtaaacgta 7812605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 157
Target Start/End: Original strand, 8397157 - 8397205
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaa 157  Q
    ||||||||||| |||||| ||||||||||||||||||||||| ||||||    
T  8397157 tagccgagtttgcatggaaattagggtattctgtttgtaaacatattaa 8397205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 52688967 - 52689019
Alignment:
Q  114 gagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||| |||||| ||| ||||||||||||||||||| |||||||||||||||    
T  52688967 gagtttgcatggaaattggggtattctgtttgtaaacatattaaataagtgta 52689019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 12795727 - 12795779
Alignment:
Q  114 gagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||| |||||| ||||| |||||||| ||||||||||| ||||||||||||    
T  12795727 gagtttgcatggaaattagagtattctggttgtaaacgtactaaataagtgta 12795779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 130 - 178
Target Start/End: Complemental strand, 46883590 - 46883538
Alignment:
Q  130 tagggtattctgtttgtaaacgtattaaataa----gtgtacaacaacttgtc 178  Q
    ||||||||||| ||||||||||||||||||||    |||||||||||||||||    
T  46883590 tagggtattctatttgtaaacgtattaaataaataggtgtacaacaacttgtc 46883538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 460381 - 460443
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  460381 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 460443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 5021954 - 5022016
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| | || ||||||||||||||||||||| || ||||| | ||||||    
T  5021954 ccaccatgaaaactcttctgggtctccattaaactttggagctttaccagagtctgttttctt 5022016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 10741635 - 10741573
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  10741635 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 10741573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 10955404 - 10955342
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  10955404 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 10955342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 14711860 - 14711798
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||| ||||||||||||||||| || || ||||||||    
T  14711860 ccaccaagaaaactcttctggatctccattgaactttggagcttttccagaatctgatttctt 14711798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 16265683 - 16265745
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  16265683 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 16265745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 17927917 - 17927979
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  17927917 ccaccatgaaaactcttctggatgtccattaaactttggagcttttccagagtctgttttctt 17927979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 18131286 - 18131224
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  18131286 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 18131224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 18753527 - 18753465
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  18753527 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 18753465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 19945375 - 19945313
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  19945375 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 19945313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 22006235 - 22006297
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  22006235 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 22006297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 27175892 - 27175954
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  27175892 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 27175954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 27666391 - 27666453
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  27666391 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 27666453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 27815983 - 27815921
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  27815983 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 27815921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 30927530 - 30927468
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  30927530 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 30927468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 36028109 - 36028171
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  36028109 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 36028171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 40455397 - 40455335
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  40455397 ccaccatgaaaactcttctggatgtccattaaactttggagcttttccagagtctgttttctt 40455335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 162
Target Start/End: Complemental strand, 47632021 - 47631987
Alignment:
Q  128 attagggtattctgtttgtaaacgtattaaataag 162  Q
    ||||||| |||||||||||||||||||||||||||    
T  47632021 attagggcattctgtttgtaaacgtattaaataag 47631987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 49517355 - 49517417
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||||||| ||||||||||||| ||||| | ||||||    
T  49517355 ccaccaagaaaactcttctggatctccattaaaccttggagcttttccagagtctgttttctt 49517417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 55746289 - 55746227
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  55746289 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 55746227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 196270 - 196331
Alignment:
Q  108 atagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgtacaa 169  Q
    |||||||||||| |||| | ||||||||||| ||||||||||||||||||||||||||||||    
T  196270 atagccgagtttacatgaaaattagggtattatgtttgtaaacgtattaaataagtgtacaa 196331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 196215 - 196255
Alignment:
Q  79 agagaaacacggtttagggtttgctatatatagccgagttt 119  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  196215 agagaaacacggtttagggttttctatatatagctgagttt 196255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 103004 - 102947
Alignment:
Q  109 tagccgagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||||||| |||||    
T  103004 tagccgagtttgcatgaaaattagggtattctgtttgtaaacgtattaaatacgtgta 102947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 13256 - 13204
Alignment:
Q  114 gagtttccatggatattagggtattctgtttgtaaacgtattaaataagtgta 166  Q
    |||||| |||| | |||||||||||||||||||||||||||||||||||||||    
T  13256 gagtttgcatgaaaattagggtattctgtttgtaaacgtattaaataagtgta 13204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1820 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1820
Description:

Target: scaffold1820; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 623 - 685
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    ||||||||||||||||||||| | |||||| ||||||||||||||||| || || ||||||||    
T  623 ccaccaagaaaactcttcagaatctccattgaactttggagcttttccagaatctgatttctt 685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 165778 - 165716
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    ||||||||||||||||||||  | |||||| ||||||||||||||||| || || ||||||||    
T  165778 ccaccaagaaaactcttcaggatctccattgaactttggagcttttccagaatctgatttctt 165716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 2135 - 2073
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||| ||||||||||||||||| || || ||||||||    
T  2135 ccaccaagaaaactcttctggatctccattgaactttggagcttttccagaatctgatttctt 2073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 11610 - 11672
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||| |||||||  | |||||||||||||||| ||||||| ||||| ||||||||    
T  11610 ccaccaggaaaattcttcaggatctccattaaactttggaacttttccagagtcagatttctt 11672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 7661 - 7723
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||| |||||||  | |||||||||||||||| ||||||| ||||| ||||||||    
T  7661 ccaccaggaaaattcttcaggatctccattaaactttggaacttttccagagtcagatttctt 7723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 622 - 560
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||||   | |||||| ||||||||||||||||  ||||| ||||||||    
T  622 ccaccaagaaaactcttcaagatctccattgaactttggagcttttctagagtctgatttctt 560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 38031 - 37969
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  38031 ccaccatgaaaactcttctggatctccattaaactttggagcttttccagagtctgttttctt 37969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 11406 - 11344
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttctt 385  Q
    |||||||||||||||||| |  | |||||| ||||||||||||||||| || || ||||||||    
T  11406 ccaccaagaaaactcttctggatctccattgaactttggagcttttccagaatctgatttctt 11344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 264 - 309
Alignment:
Q  247 tcatcagtgaggagaaatattagggattgttgcattttagagggaa 292  Q
    |||||||||||||  |||||||||||||| ||||||||| ||||||    
T  264 tcatcagtgaggatcaatattagggattgctgcattttatagggaa 309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 41466 - 41406
Alignment:
Q  323 ccaccaagaaaactcttcagagtttccattaaactttggagcttttcctgagtcggatttc 383  Q
    |||||||||||||||||| |  | |||||| ||||||||||||||||| || || ||||||    
T  41466 ccaccaagaaaactcttctgtatctccattgaactttggagcttttccagaatctgatttc 41406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University