View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15928_low_12 (Length: 282)
Name: NF15928_low_12
Description: NF15928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15928_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 28 - 273
Target Start/End: Original strand, 37863450 - 37863695
Alignment:
| Q |
28 |
tatatattatttatctttactataacataatgtttaaaatatgtgaaatcaattttgcatcttccacatgaaaatccaacatatatgtacatgtgccgcc |
127 |
Q |
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| T |
37863450 |
tatatattatttatttttactataacataatgtttaaaatatgtgaaatcaattttgtatcttccacatgaaaatccaacatatatgtacatgtgccgca |
37863549 |
T |
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| Q |
128 |
acatgattggtgaaatccaaacacacaagtcagtatatagccctacatgattgaccagaattgaaagtcttgacaaaaacatatatgtactttaaaaagt |
227 |
Q |
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|||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37863550 |
acatgatttgtgaaatccaaacacacaagtcattatatagccctacatgattgagcagaattgaaagtcttgacaaaaacatatatgtactttaaaaagt |
37863649 |
T |
|
| Q |
228 |
ttcatgacctttcgtgttacacttgaccggtctatagaattatcta |
273 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
37863650 |
ttcatgacctttcgtgttacacttgaccggtctatagagttatcta |
37863695 |
T |
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