View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15929_high_16 (Length: 326)

Name: NF15929_high_16
Description: NF15929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15929_high_16
NF15929_high_16
[»] chr5 (30 HSPs)
chr5 (15-326)||(38816628-38816932)
chr5 (119-191)||(19820431-19820503)
chr5 (36-165)||(22423764-22423895)
chr5 (124-191)||(22013364-22013431)
chr5 (119-191)||(42469171-42469243)
chr5 (68-152)||(11685928-11686012)
chr5 (119-166)||(15410485-15410532)
chr5 (119-169)||(6326334-6326384)
chr5 (119-152)||(6035472-6035505)
chr5 (34-83)||(8420075-8420124)
chr5 (123-176)||(15382442-15382495)
chr5 (124-191)||(2436878-2436939)
chr5 (36-88)||(9929668-9929720)
chr5 (125-169)||(21522722-21522766)
chr5 (125-169)||(21533288-21533332)
chr5 (117-169)||(36642797-36642849)
chr5 (68-193)||(37328829-37328955)
chr5 (68-152)||(3966492-3966577)
chr5 (123-169)||(21191097-21191143)
chr5 (34-64)||(24906250-24906280)
chr5 (122-152)||(27144452-27144482)
chr5 (119-152)||(17123037-17123070)
chr5 (119-176)||(21137654-21137711)
chr5 (119-159)||(5873550-5873590)
chr5 (123-191)||(6247572-6247640)
chr5 (123-159)||(14674251-14674287)
chr5 (119-159)||(19579683-19579723)
chr5 (119-147)||(27932229-27932257)
chr5 (123-191)||(30135264-30135331)
chr5 (119-159)||(34879332-34879372)
[»] chr7 (31 HSPs)
chr7 (119-191)||(27944991-27945063)
chr7 (123-191)||(24105629-24105696)
chr7 (119-169)||(11722135-11722185)
chr7 (66-148)||(29787354-29787435)
chr7 (68-178)||(24339605-24339716)
chr7 (85-166)||(19206025-19206107)
chr7 (120-191)||(2034392-2034462)
chr7 (68-152)||(6630897-6630982)
chr7 (68-152)||(32308109-32308194)
chr7 (119-176)||(1433419-1433476)
chr7 (119-196)||(7328728-7328805)
chr7 (36-146)||(11700798-11700909)
chr7 (119-176)||(43249958-43250015)
chr7 (119-167)||(2425770-2425818)
chr7 (123-191)||(43027510-43027578)
chr7 (119-167)||(49107795-49107843)
chr7 (119-158)||(8046064-8046103)
chr7 (119-158)||(23191879-23191918)
chr7 (123-166)||(26733279-26733322)
chr7 (85-152)||(22484014-22484082)
chr7 (73-147)||(30731031-30731104)
chr7 (35-64)||(17852091-17852120)
chr7 (119-152)||(20549780-20549813)
chr7 (119-152)||(25791642-25791675)
chr7 (119-176)||(26329419-26329476)
chr7 (119-148)||(28155563-28155592)
chr7 (119-155)||(2948669-2948705)
chr7 (119-167)||(4017831-4017879)
chr7 (119-167)||(5235960-5236008)
chr7 (36-64)||(15680900-15680928)
chr7 (119-159)||(21828442-21828482)
[»] chr6 (31 HSPs)
chr6 (68-169)||(10294079-10294181)
chr6 (121-176)||(9027143-9027198)
chr6 (123-191)||(853900-853968)
chr6 (123-191)||(8365560-8365628)
chr6 (68-176)||(16766662-16766771)
chr6 (123-189)||(12696277-12696342)
chr6 (119-176)||(5000663-5000720)
chr6 (123-191)||(3398569-3398637)
chr6 (36-176)||(5732474-5732604)
chr6 (119-191)||(6389693-6389765)
chr6 (119-167)||(9629357-9629405)
chr6 (119-191)||(30866181-30866253)
chr6 (36-166)||(8805524-8805656)
chr6 (68-176)||(9107355-9107464)
chr6 (119-166)||(9658854-9658901)
chr6 (119-154)||(19040339-19040374)
chr6 (119-165)||(13851712-13851758)
chr6 (123-176)||(7938081-7938134)
chr6 (123-176)||(7977871-7977924)
chr6 (119-159)||(20371147-20371187)
chr6 (36-83)||(426478-426525)
chr6 (123-169)||(426555-426601)
chr6 (119-157)||(7265630-7265668)
chr6 (34-64)||(34073276-34073306)
chr6 (73-176)||(34073337-34073441)
chr6 (36-77)||(2117134-2117175)
chr6 (123-168)||(8777014-8777059)
chr6 (117-146)||(25207759-25207788)
chr6 (123-176)||(34595099-34595152)
chr6 (123-159)||(17841630-17841666)
chr6 (119-191)||(25038108-25038180)
[»] chr8 (14 HSPs)
chr8 (117-191)||(25192382-25192456)
chr8 (68-169)||(22651948-22652050)
chr8 (68-174)||(29510289-29510396)
chr8 (123-191)||(126390-126457)
chr8 (119-182)||(926825-926888)
chr8 (119-169)||(27213519-27213569)
chr8 (121-178)||(24362241-24362298)
chr8 (123-191)||(13437005-13437073)
chr8 (119-159)||(31109555-31109595)
chr8 (119-149)||(39954316-39954346)
chr8 (119-156)||(31236614-31236651)
chr8 (123-191)||(4298927-4298994)
chr8 (123-191)||(11944615-11944683)
chr8 (83-159)||(37283812-37283887)
[»] chr2 (22 HSPs)
chr2 (127-191)||(33519736-33519800)
chr2 (80-191)||(21782817-21782927)
chr2 (123-191)||(20539715-20539783)
chr2 (116-192)||(23717976-23718051)
chr2 (116-192)||(24105648-24105723)
chr2 (123-191)||(19536439-19536507)
chr2 (85-176)||(4332891-4332981)
chr2 (119-166)||(21616737-21616784)
chr2 (125-190)||(21624217-21624282)
chr2 (36-83)||(19536361-19536408)
chr2 (36-83)||(19574031-19574078)
chr2 (85-143)||(1327976-1328033)
chr2 (37-83)||(18255945-18255991)
chr2 (37-83)||(34691770-34691816)
chr2 (37-83)||(34714182-34714228)
chr2 (68-166)||(36409614-36409711)
chr2 (123-192)||(14996265-14996333)
chr2 (119-176)||(18276486-18276543)
chr2 (123-192)||(21374740-21374810)
chr2 (119-151)||(37411281-37411313)
chr2 (36-72)||(42511322-42511358)
chr2 (68-141)||(44860320-44860394)
[»] scaffold0306 (1 HSPs)
scaffold0306 (119-192)||(13349-13422)
[»] scaffold0152 (1 HSPs)
scaffold0152 (119-192)||(21905-21978)
[»] chr1 (27 HSPs)
chr1 (119-168)||(6427323-6427372)
chr1 (123-176)||(40917716-40917769)
chr1 (123-175)||(398806-398858)
chr1 (119-168)||(2896158-2896207)
chr1 (119-192)||(5376537-5376609)
chr1 (36-89)||(48547938-48547991)
chr1 (123-191)||(5927381-5927449)
chr1 (119-183)||(10572626-10572690)
chr1 (118-178)||(48040498-48040558)
chr1 (119-160)||(12443497-12443538)
chr1 (119-152)||(17831568-17831601)
chr1 (119-152)||(36878450-36878483)
chr1 (119-191)||(39130804-39130876)
chr1 (77-169)||(1486703-1486796)
chr1 (119-166)||(9709795-9709842)
chr1 (119-166)||(34298411-34298458)
chr1 (76-176)||(38503285-38503386)
chr1 (119-169)||(1262856-1262906)
chr1 (119-152)||(609495-609528)
chr1 (119-152)||(3490427-3490460)
chr1 (119-152)||(19562658-19562691)
chr1 (123-168)||(48450628-48450673)
chr1 (119-159)||(6415038-6415078)
chr1 (123-159)||(18556497-18556533)
chr1 (119-191)||(31014993-31015065)
chr1 (131-191)||(34315663-34315722)
chr1 (123-159)||(46348424-46348460)
[»] scaffold0223 (1 HSPs)
scaffold0223 (123-191)||(20122-20190)
[»] chr3 (26 HSPs)
chr3 (119-191)||(8383207-8383279)
chr3 (125-191)||(8842280-8842346)
chr3 (116-182)||(10335320-10335386)
chr3 (119-176)||(24205078-24205135)
chr3 (79-178)||(5441029-5441128)
chr3 (66-155)||(8039818-8039908)
chr3 (119-176)||(4991004-4991061)
chr3 (119-160)||(5407284-5407325)
chr3 (123-176)||(28917966-28918019)
chr3 (119-167)||(9800014-9800062)
chr3 (123-191)||(55401025-55401093)
chr3 (123-190)||(8587062-8587129)
chr3 (116-159)||(10318068-10318111)
chr3 (120-159)||(21720746-21720785)
chr3 (68-191)||(25064859-25064981)
chr3 (119-190)||(32429417-32429488)
chr3 (34-72)||(4466538-4466576)
chr3 (34-64)||(5440965-5440995)
chr3 (34-72)||(13807237-13807275)
chr3 (119-168)||(2620090-2620139)
chr3 (119-192)||(14223890-14223962)
chr3 (123-176)||(15796335-15796388)
chr3 (123-168)||(26492246-26492291)
chr3 (123-159)||(3865597-3865633)
chr3 (119-159)||(12703989-12704029)
chr3 (36-72)||(27505334-27505370)
[»] scaffold0168 (3 HSPs)
scaffold0168 (36-182)||(21002-21149)
scaffold0168 (36-97)||(21217-21278)
scaffold0168 (36-97)||(21346-21407)
[»] scaffold0053 (1 HSPs)
scaffold0053 (123-176)||(8763-8816)
[»] scaffold0007 (1 HSPs)
scaffold0007 (119-176)||(225305-225362)
[»] scaffold0003 (1 HSPs)
scaffold0003 (124-176)||(241559-241611)
[»] scaffold0004 (1 HSPs)
scaffold0004 (119-158)||(92790-92829)
[»] scaffold0018 (2 HSPs)
scaffold0018 (123-188)||(178860-178925)
scaffold0018 (119-158)||(192286-192325)
[»] chr4 (14 HSPs)
chr4 (119-152)||(17345452-17345485)
chr4 (123-176)||(23293027-23293080)
chr4 (119-152)||(35723422-35723455)
chr4 (119-174)||(847918-847973)
chr4 (119-169)||(36635296-36635346)
chr4 (123-176)||(20633450-20633503)
chr4 (119-176)||(24343472-24343529)
chr4 (119-159)||(7012048-7012088)
chr4 (36-80)||(18844423-18844467)
chr4 (123-187)||(28084475-28084539)
chr4 (36-72)||(28470448-28470484)
chr4 (123-191)||(28720827-28720894)
chr4 (123-159)||(30298928-30298964)
chr4 (123-159)||(30327796-30327832)
[»] scaffold0044 (1 HSPs)
scaffold0044 (66-151)||(53170-53256)
[»] scaffold0652 (1 HSPs)
scaffold0652 (123-176)||(503-556)
[»] scaffold0475 (1 HSPs)
scaffold0475 (119-176)||(3281-3338)
[»] scaffold0450 (1 HSPs)
scaffold0450 (36-64)||(8564-8592)
[»] scaffold0103 (1 HSPs)
scaffold0103 (123-159)||(51793-51829)
[»] scaffold0027 (1 HSPs)
scaffold0027 (34-82)||(46731-46778)


Alignment Details
Target: chr5 (Bit Score: 266; Significance: 1e-148; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 15 - 326
Target Start/End: Original strand, 38816628 - 38816932
Alignment:
Q  15 tatcacgattcacgaatataactatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatag 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38816628 tatcacgattcacgaatataactatgaatcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattatactgaaatatag 38816727  T
Q  115 cgactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatatggttaccgttcaattatt 214  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||| ||||||||||||||||||||||||||||||||||    
T  38816728 cgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc-------ggagtccgtattagtgcttcatagtatatggttaccgttcaattatt 38816820  T
Q  215 ctattttctcaaattattgcttcaattcaagcaatgatacaaacaatataccatattacattaattgaattgtaaaacccaactatttttaacctgcagc 314  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816821 ctattttctcaaattattgcttcaattcaaacaatgatacaaacaatataccatattacattaattgaattgtaaaacccaactatttttaacctgcagc 38816920  T
Q  315 gactctctgttg 326  Q
    ||||||||||||    
T  38816921 gactctctgttg 38816932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 19820431 - 19820503
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  19820431 tttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 19820503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 165
Target Start/End: Original strand, 22423764 - 22423895
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtcc-gacaccgacaccacaccgacacata--attataatgaaatatagcgactttctcaaattatt 132  Q
    ||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||||||||| |||  |||||| |||| ||| | || ||||||||||||||    
T  22423764 ctatgaagcacggacactcctcggattaggcgtgtccagacaccgacacgacaccgacatatataattatattgaattat-gtgattttctcaaattatt 22423862  T
Q  133 agcggtgtcggcgtgtcagtatccgtgccgtgt 165  Q
    ||  ||||| | ||||||||||||||| |||||    
T  22423863 agtagtgtcagggtgtcagtatccgtgtcgtgt 22423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 22013431 - 22013364
Alignment:
Q  124 caaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||||||||| |||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  22013431 caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 22013364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 42469243 - 42469171
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||||| | |||||||||||||| |||||||| ||||| ||| |||||| | ||||||||||||    
T  42469243 tttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtccgtgtccgtgcttcatag 42469171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 11686012 - 11685928
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    ||||||||||||| || |||||||||||||  |||| | | || ||| ||||||||||||||||||||||||||||||| |||||||    
T  11686012 tgtccgacaccga-acgacaccgacacatataattacactaaattat-gcgactttctcaaattattagcggtgtcggcatgtcagt 11685928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 15410485 - 15410532
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 166  Q
    ||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  15410485 tttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 15410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 169
Target Start/End: Original strand, 6326334 - 6326384
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 169  Q
    |||||||||||| ||||| ||||||||||||||| |||||| |||||||||    
T  6326334 tttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccgg 6326384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 152
Target Start/End: Complemental strand, 6035505 - 6035472
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    ||||||||||||||||||||||||||||||||||    
T  6035505 tttctcaaattattagcggtgtcggcgtgtcagt 6035472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 8420124 - 8420075
Alignment:
Q  34 aactatgaagcacggacactcctcgaattagccatgtccgacaccgacac 83  Q
    |||||||||||||||| |||||||||||||| |  |||||||||||||||    
T  8420124 aactatgaagcacggatactcctcgaattaggcgcgtccgacaccgacac 8420075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 15382495 - 15382442
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||| |||||||||||||| | |||||| ||||||||| ||||||    
T  15382495 tcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15382442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 2436939 - 2436878
Alignment:
Q  124 caaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||||||||||||||||||||||||      ||| ||||||||| |||||||| ||||||||||||    
T  2436939 caaattattagcggtgtcggcgtgtca------gtgtcgtgtccggtgtccgtatccgtgcttcatag 2436878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 9929720 - 9929668
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacac 88  Q
    ||||||||||| ||||||||||||||||| | ||||||| |||||||| ||||    
T  9929720 ctatgaagcacagacactcctcgaattagtcgtgtccgataccgacacgacac 9929668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 21522766 - 21522722
Alignment:
Q  125 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 169  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||    
T  21522766 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21522722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 21533332 - 21533288
Alignment:
Q  125 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 169  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||    
T  21533332 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21533288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 36642797 - 36642849
Alignment:
Q  117 actttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 169  Q
    ||||| ||||||||||| | |||||||||||||||| |||||| |||||||||    
T  36642797 actttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 36642849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 37328829 - 37328955
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 165  Q
    |||||||||||||||| ||||||||||||  ||||| | |||| | | | || |||  ||||||||| || ||||||| || ||||| |||||| |||||    
T  37328829 tgtccgacaccgacacgacaccgacacatgtaattacactgaatttt-gtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgt 37328927  T
Q  166 ccggagtccgtattcgtgcttcatagta 193  Q
     ||| |||||| | ||||||||||||||    
T  37328928 tcggtgtccgtgtccgtgcttcatagta 37328955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 3966577 - 3966492
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    |||||||||| ||||| |||||||||||||  |||| | |||| | | | || |||||||||||||||||||||||||| |||||||    
T  3966577 tgtccgacactgacacgacaccgacacatataattacactgaattgt-gtgattttctcaaattattagcggtgtcggcatgtcagt 3966492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 21191097 - 21191143
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 169  Q
    ||||||||||||| |||||||| ||||||| |||||| |||||||||    
T  21191097 tcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccgg 21191143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 24906250 - 24906280
Alignment:
Q  34 aactatgaagcacggacactcctcgaattag 64  Q
    |||||||||||||||||||||||||||||||    
T  24906250 aactatgaagcacggacactcctcgaattag 24906280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 152
Target Start/End: Complemental strand, 27144482 - 27144452
Alignment:
Q  122 ctcaaattattagcggtgtcggcgtgtcagt 152  Q
    |||||||||||||||||||||||||||||||    
T  27144482 ctcaaattattagcggtgtcggcgtgtcagt 27144452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 152
Target Start/End: Complemental strand, 17123070 - 17123037
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    |||||||||||||||||||||| |||||||||||    
T  17123070 tttctcaaattattagcggtgttggcgtgtcagt 17123037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 21137711 - 21137654
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||||| ||||||| || ||||||||||||||| ||||||  |||||||| ||||||    
T  21137711 tttctcagattattaccgatgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgt 21137654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 5873550 - 5873590
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    |||||||||||||||| ||||||||| ||||||| ||||||    
T  5873550 tttctcaaattattagaggtgtcggcatgtcagtgtccgtg 5873590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 6247640 - 6247572
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||  |||||||||||||||| | |||  ||||||||| ||||| || |||| |||||||    
T  6247640 tcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtccgcatccgtgtttcatag 6247572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 14674287 - 14674251
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  14674287 tcaaattattagctgtgtcggcgtgtcagtgtccgtg 14674251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 19579723 - 19579683
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    ||||||||||||||||| |||||||||| ||||| ||||||    
T  19579723 tttctcaaattattagctgtgtcggcgtatcagtgtccgtg 19579683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 147
Target Start/End: Complemental strand, 27932257 - 27932229
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtg 147  Q
    |||||||||||||||||||||||||||||    
T  27932257 tttctcaaattattagcggtgtcggcgtg 27932229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 30135331 - 30135264
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||  ||||||||||||| ||||| ||| ||||||| | ||||||||  |||||||||||    
T  30135331 tcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgtcc-gtgtccgtatatgtgcttcatag 30135264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 34879372 - 34879332
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    ||||||||||| ||||||||| ||||||||| |||||||||    
T  34879372 tttctcaaatttttagcggtgccggcgtgtccgtatccgtg 34879332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 27945063 - 27944991
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  27945063 tttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 27944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 24105696 - 24105629
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||| |||||||||||||||| |||||| |||||||| | ||||||| ||||||||||||    
T  24105696 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgta-tccgtatccgtgcttcatag 24105629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 169
Target Start/End: Original strand, 11722135 - 11722185
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 169  Q
    ||||||||||| |||||||||||||||||||||| |||||| |||||||||    
T  11722135 tttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccgg 11722185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 29787354 - 29787435
Alignment:
Q  66 catgtccgacaccgacaccacaccgacacataattataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgt 148  Q
    ||||||| |||||||||  ||||| ||||||||||| | |||| ||| | || ||||||||||||||||||||||||||||||    
T  29787354 catgtccaacaccgacattacaccaacacataattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgt 29787435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 178
Target Start/End: Complemental strand, 24339716 - 24339605
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 165  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | || ||| ||||||||||||| |||||||||||||| | ||| || |||||    
T  24339716 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgt 24339618  T
Q  166 ccggagtccgtat 178  Q
    |||| ||||||||    
T  24339617 ccggtgtccgtat 24339605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 166
Target Start/End: Complemental strand, 19206107 - 19206025
Alignment:
Q  85 acaccgacacata--attataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 166  Q
    |||||||||||||  ||||||||||| ||| | || ||||||||||||||||||||||||||||||  || |||||| ||||||    
T  19206107 acaccgacacatataattataatgaattat-gtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtc 19206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 191
Target Start/End: Complemental strand, 2034462 - 2034392
Alignment:
Q  120 ttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||||| ||||||| ||||| |||||||||| |||||| | | ||||||| ||||||||||||    
T  2034462 ttctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtcagta-tccgtatccgtgcttcatag 2034392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 6630897 - 6630982
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    ||||||||||| |||| ||| |||||||||  |||| | |||| || || ||||||||||||||||||| |||||||||||||||||    
T  6630897 tgtccgacaccaacacgacatcgacacatataattacactgaatta-agtgactttctcaaattattagtggtgtcggcgtgtcagt 6630982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 32308194 - 32308109
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    ||||| |||||||||| |||| ||||||||  |||| | |||| ||| | || ||||||||||||||||||||||||||||||||||    
T  32308194 tgtccaacaccgacacgacactgacacatacaattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgtcagt 32308109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 1433476 - 1433419
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||||| |||||||||||||||| | |||||| ||||| ||| ||||||    
T  1433476 tttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgt 1433419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 7328728 - 7328805
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatat 196  Q
    ||||||||||||||||| || ||| ||||| | | || ||| ||||| ||| |||||||| |||||||||||||||||    
T  7328728 tttctcaaattattagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgtccgtatccgtgcttcatagtatat 7328805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 146
Target Start/End: Complemental strand, 11700909 - 11700798
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgt--ccgacaccgacaccacaccgacacataattataatgaaatatagcgactttctcaaattatta 133  Q
    ||||||| || |||||||||||| ||||||| |||  |||||||||| || |||| |||||||||||| | |||| ||| | || ||| |||||||||||    
T  11700909 ctatgaatcagggacactcctcggattagccgtgtgtccgacaccgagacaacacagacacataattacattgaattat-gtgattttgtcaaattatta 11700811  T
Q  134 gcggtgtcggcgt 146  Q
     ||||||| ||||    
T  11700810 acggtgtcagcgt 11700798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 43250015 - 43249958
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||||| | |||||||||||||||| |||||| | ||||||| ||||||    
T  43250015 tttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtccgt 43249958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 2425770 - 2425818
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 167  Q
    ||||||||||||||| ||||| ||||||||||||||| ||| |||||||    
T  2425770 tttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtcc 2425818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 43027510 - 43027578
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||| | |||| ||||||||| |||||| ||||||| | ||||| || ||||||||||||    
T  43027510 tcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtccgcatccgtgcttcatag 43027578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 49107843 - 49107795
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 167  Q
    ||||||||||||||||||||||||| |||||||  |||||| |||||||    
T  49107843 tttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgtcc 49107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 8046064 - 8046103
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgt 158  Q
    |||||||||||||||| ||||| |||||||||||||||||    
T  8046064 tttctcaaattattagtggtgttggcgtgtcagtatccgt 8046103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 23191918 - 23191879
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgt 158  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  23191918 tttctcaaattattagcggtgtcggcgtatcagtgtccgt 23191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 26733322 - 26733279
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 166  Q
    |||||||||||||||||||| ||||||||| |||||| ||||||    
T  26733322 tcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 22484082 - 22484014
Alignment:
Q  85 acaccgacacata--attataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    |||||||||||||  |||||| |||| ||| || | ||||| ||||||||||||||||||||||||||||    
T  22484082 acaccgacacatataattatactgaattat-gcaattttctaaaattattagcggtgtcggcgtgtcagt 22484014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 30731104 - 30731031
Alignment:
Q  73 gacaccgacaccacaccgacacataattataatgaaatatagcgactttctcaaattattagcggtgtcggcgtg 147  Q
    |||||| |||| ||||||||||| ||||| | |||| ||| | || |||||||||||||| ||||||||||||||    
T  30731104 gacaccaacacgacaccgacacacaattacactgaattat-gtgattttctcaaattattcgcggtgtcggcgtg 30731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 64
Target Start/End: Complemental strand, 17852120 - 17852091
Alignment:
Q  35 actatgaagcacggacactcctcgaattag 64  Q
    ||||||||||||||||||||||||||||||    
T  17852120 actatgaagcacggacactcctcgaattag 17852091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 152
Target Start/End: Complemental strand, 20549813 - 20549780
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    ||||||||||||||||||||||||| ||||||||    
T  20549813 tttctcaaattattagcggtgtcggtgtgtcagt 20549780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 152
Target Start/End: Complemental strand, 25791675 - 25791642
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    |||||||||| |||||||||||||||||||||||    
T  25791675 tttctcaaataattagcggtgtcggcgtgtcagt 25791642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 26329419 - 26329476
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||||| || ||||||||||||||| || ||| ||||||| | ||||||    
T  26329419 tttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtccagtgtccgt 26329476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 148
Target Start/End: Complemental strand, 28155592 - 28155563
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgt 148  Q
    ||||||||||||||||||||||||||||||    
T  28155592 tttctcaaattattagcggtgtcggcgtgt 28155563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 155
Target Start/End: Complemental strand, 2948705 - 2948669
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatc 155  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  2948705 tttctaaaattatcagcggtgtcggcgtgtcagtatc 2948669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 4017831 - 4017879
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 167  Q
    ||||||||||||||| | ||||||||||||| || |||||| |||||||    
T  4017831 tttctcaaattattatccgtgtcggcgtgtcggtgtccgtgtcgtgtcc 4017879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 5236008 - 5235960
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 167  Q
    ||||| |||||||||||||||||| ||||||||| || ||| |||||||    
T  5236008 tttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtcc 5235960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 15680928 - 15680900
Alignment:
Q  36 ctatgaagcacggacactcctcgaattag 64  Q
    |||||||||||||||||||||||||||||    
T  15680928 ctatgaagcacggacactcctcgaattag 15680900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 21828442 - 21828482
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    |||||||||||| || |||||||||||||||||| ||||||    
T  21828442 tttctcaaattactaacggtgtcggcgtgtcagtgtccgtg 21828482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 10294181 - 10294079
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 165  Q
    ||||||||||| |||| |||||||||||||  |||| | |||||||| |||| | |||||||||||||||||| ||||| |||||||||||||| |||||    
T  10294181 tgtccgacaccaacacgacaccgacacatataattacattgaaatat-gcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgt 10294083  T
Q  166 ccgg 169  Q
    ||||    
T  10294082 ccgg 10294079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 9027198 - 9027143
Alignment:
Q  121 tctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  9027198 tctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgt 9027143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 853900 - 853968
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||  ||||||||||||||| ||||||| ||||||||| |||||||| |||| |||||||    
T  853900 tcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatccgtgattcatag 853968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 8365560 - 8365628
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||  |||||||||||||||| |||||| |||||| || |||||||| ||||||||||||    
T  8365560 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgtatccgtgcttcatag 8365628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 176
Target Start/End: Complemental strand, 16766771 - 16766662
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 165  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | || ||| ||||||||||||| |||||||||||||||| ||| || |||||    
T  16766771 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgt 16766673  T
Q  166 ccggagtccgt 176  Q
    |||| ||||||    
T  16766672 ccggtgtccgt 16766662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 12696342 - 12696277
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcat 189  Q
    ||||||||||||| |||||||||||||||| |||||| ||||||| | |||||||| ||||||||||    
T  12696342 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc-gtgtccgtatccgtgcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 5000663 - 5000720
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    |||||| ||||||||||||||||| |||||||||||||||| | ||||||| ||||||    
T  5000663 tttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtccgt 5000720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 3398637 - 3398569
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||| |||||||||||||||| |||||| ||||| ||  |||||||| | ||||||||||    
T  3398637 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgtatccatgcttcatag 3398569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 176
Target Start/End: Original strand, 5732474 - 5732604
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatagcgactttctcaaattattagc 135  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||         | ||||||| | | |||||| | || ||||||||||||||| |    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac---------atataattacactaaaatat-gtgattttctcaaattattaac 5732563  T
Q  136 ggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||||||| ||| || ||||||| | ||||||    
T  5732564 ggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgt 5732604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 6389765 - 6389693
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||||| | |||||||||||| ||| |||||| ||||||||| ||| || | ||||||||||||    
T  6389765 tttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgtgtccgtgcttcatag 6389693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 9629405 - 9629357
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 167  Q
    |||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  9629405 tttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtcc 9629357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 30866181 - 30866253
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||||||||||||||||||| || ||||| || || ||| | ||||||| |||||||||||| ||||||||    
T  30866181 tttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgtattcgtacttcatag 30866253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 166
Target Start/End: Original strand, 8805524 - 8805656
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgac---accgacaccacaccgacacataattataatgaaatatagcgactttctcaaattatt 132  Q
    ||||||||||||||||||||||| ||||| ||||||| ||    | ||||| ||||||||||||||||| | | || ||| | || ||||||||||||||    
T  8805524 ctatgaagcacggacactcctcggattaggcatgtcccacgtgtctgacactacaccgacacataattacactaaattat-gtgattttctcaaattatt 8805622  T
Q  133 agcggtgtcggcgtgtcagtatccgtgccgtgtc 166  Q
    ||| ||| || |||||| || || ||| ||||||    
T  8805623 agcagtgccgacgtgtcggtgtctgtgtcgtgtc 8805656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 176
Target Start/End: Original strand, 9107355 - 9107464
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 165  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| | | | || ||| ||||||||||||| |||||||||||| ||| |||||| |||||    
T  9107355 tgtccgacaccgacacgacaccgacacttgtaattacactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgt 9107453  T
Q  166 ccggagtccgt 176  Q
    |||| ||||||    
T  9107454 ccggtgtccgt 9107464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 9658901 - 9658854
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 166  Q
    ||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  9658901 tttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 154
Target Start/End: Complemental strand, 19040374 - 19040339
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtat 154  Q
    ||||||||||||||||||||||||||||||||||||    
T  19040374 tttctcaaattattagcggtgtcggcgtgtcagtat 19040339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 13851758 - 13851712
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 165  Q
    |||||||||||||||||||||||| ||||||||| |||||| |||||    
T  13851758 tttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 7938134 - 7938081
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||| |||||||||||||||| ||| || ||||||||| ||||||    
T  7938134 tcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgt 7938081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 7977871 - 7977924
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||| |||||||||||||||||||| || ||||||| | ||||||    
T  7977871 tcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgt 7977924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 20371147 - 20371187
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  20371147 tttctcaaattattagcggtgtcggcgtgtcaatgtccgtg 20371187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 426478 - 426525
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 83  Q
    ||||||||||||||||||||||  ||||| | ||||||||||||||||    
T  426478 ctatgaagcacggacactcctcagattaggcgtgtccgacaccgacac 426525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 426555 - 426601
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 169  Q
    ||||||||||| | |||||||||||||||| |||||| |||||||||    
T  426555 tcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 426601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 157
Target Start/End: Original strand, 7265630 - 7265668
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccg 157  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  7265630 tttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 34073276 - 34073306
Alignment:
Q  34 aactatgaagcacggacactcctcgaattag 64  Q
    |||||||||||||||||||||||||||||||    
T  34073276 aactatgaagcacggacactcctcgaattag 34073306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 34073337 - 34073441
Alignment:
Q  73 gacaccgacaccacaccgacacata--attataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 170  Q
    ||||||||||| |||||||| ||||  |||| | |||| ||| | || |||||||||||||||||| ||| ||| ||||||| |||||| ||||||| |     
T  34073337 gacaccgacacgacaccgacccatataattacactgaattat-gagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagt 34073435  T
Q  171 gtccgt 176  Q
    ||||||    
T  34073436 gtccgt 34073441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 2117175 - 2117134
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacac 77  Q
    ||||||||||||||||||||||  ||||| ||||||||||||    
T  2117175 ctatgaagcacggacactcctccgattaggcatgtccgacac 2117134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 8777014 - 8777059
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 168  Q
    ||||||||||||  |||||||||||||||| |||||| ||||||||    
T  8777014 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 8777059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 146
Target Start/End: Complemental strand, 25207788 - 25207759
Alignment:
Q  117 actttctcaaattattagcggtgtcggcgt 146  Q
    ||||||||||||||||||||||||||||||    
T  25207788 actttctcaaattattagcggtgtcggcgt 25207759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 34595152 - 34595099
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||  |||||||||||||| | |||||| ||||||||| ||||||    
T  34595152 tcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 34595099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 17841630 - 17841666
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  17841630 tcaaattattagctgtgtcggcgtgtcagtgtccgtg 17841666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 25038108 - 25038180
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||||| |||||||  |||||||||||| ||| ||| | |   |||||||| ||||||||||||    
T  25038108 tttctcaaattattaacggtgtcaacgtgtcagtatctgtgtcgtattcaatgtccgtatccgtgcttcatag 25038180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 8e-18; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 25192382 - 25192456
Alignment:
Q  117 actttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||| ||||||||||||| |||||||||||||||| |||||  ||||||||  |||||||||||||||||||||    
T  25192382 actttttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgtattcgtgcttcatag 25192456  T

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Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 22652050 - 22651948
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 165  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| ||| | || ||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  22652050 tgtccgacaccgacacgacaccgacacttgtaattatattgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 22651952  T
Q  166 ccgg 169  Q
    ||||    
T  22651951 ccgg 22651948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 29510289 - 29510396
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 165  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| | | | || ||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  29510289 tgtccgacaccgacactacaccgacacttgtaattatactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 29510387  T
Q  166 ccggagtcc 174  Q
    |||| ||||    
T  29510388 ccggtgtcc 29510396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 126390 - 126457
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||||||||||||||| |||||||||||||||||  ||||||| | || ||||| ||||||||||||    
T  126390 tcaaattattagcggtgttggcgtgtcagtatccgtatcgtgtcc-gtgtgcgtatccgtgcttcatag 126457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 926825 - 926888
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 182  Q
    ||||||||||||||||  |||| ||||||||||| |||||| ||||||||| |||||| |||||    
T  926825 tttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 926888  T

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Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 27213569 - 27213519
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 169  Q
    ||||| ||||||||||| ||||||||||||| ||||||||| |||||||||    
T  27213569 tttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtccgg 27213519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 24362241 - 24362298
Alignment:
Q  121 tctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 178  Q
    ||||||||||||||||||||||||||||| || || ||| ||| ||||| ||||||||    
T  24362241 tctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtat 24362298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 13437005 - 13437073
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||| |||||||||||||||| ||| || | ||||||| |||| | | ||||||||||||    
T  13437005 tcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtccatgtccgtgcttcatag 13437073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 31109555 - 31109595
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    ||||||||||||||| |||||||||||||||||| ||||||    
T  31109555 tttctcaaattattaacggtgtcggcgtgtcagtgtccgtg 31109595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 149
Target Start/End: Original strand, 39954316 - 39954346
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtc 149  Q
    |||||||||||||||||||||||||||||||    
T  39954316 tttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 31236614 - 31236651
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatcc 156  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  31236614 tttctcaaattattagcagtgtcggcgtgtccgtatcc 31236651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 4298927 - 4298994
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||| | |||||||||||| |||||| ||| ||||||| | |||| ||| ||||||||||||    
T  4298927 tcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtcc-gtgtccatatccgtgcttcatag 4298994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 11944683 - 11944615
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||| | |||||||||||| || ||||||| |||||  || ||||||||  |||||||||||    
T  11944683 tcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgtttggtgtccgtatctgtgcttcatag 11944615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 37283812 - 37283887
Alignment:
Q  83 ccacaccgacacataattataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    ||||||||||||||||||| | |||| ||| | || ||||||| ||||||||||||| | || ||||||| ||||||    
T  37283812 ccacaccgacacataattacactgaattat-gtgattttctcagattattagcggtgcccgcatgtcagtgtccgtg 37283887  T

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Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 33519800 - 33519736
Alignment:
Q  127 attattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||||||| ||||||||||||| | ||||||||| |||||||| ||||||||||||    
T  33519800 attattagcggtgtcggtgtgtcagtatccgcgtcgtgtccggtgtccgtatccgtgcttcatag 33519736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 191
Target Start/End: Original strand, 21782817 - 21782927
Alignment:
Q  80 acaccacaccgacacataattataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtatt 179  Q
    |||| |||||| |||||||||| | |||| ||| | || ||||||||||||||||| |||||||||||||||| |  ||| ||||||| | ||| |||||    
T  21782817 acacgacaccggcacataattacactgaattat-gtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtctgtatt 21782915  T
Q  180 cgtgcttcatag 191  Q
    ||||||||||||    
T  21782916 cgtgcttcatag 21782927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 20539715 - 20539783
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||| |||||| ||||||||| |||||| ||||||| | |||||||| ||||||||||||    
T  20539715 tcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatccgtgcttcatag 20539783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 23718051 - 23717976
Alignment:
Q  116 gactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 192  Q
    |||||||||||||||||||||||||||| |||||||| |||||| | ||||| | ||| |||| |||||||||||||    
T  23718051 gactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 23717976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 24105723 - 24105648
Alignment:
Q  116 gactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 192  Q
    |||||||||||||||||||||||||||| |||||||| |||||| | ||||| | ||| |||| |||||||||||||    
T  24105723 gactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 24105648  T

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Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 19536439 - 19536507
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||  |||||||||||||| | |||||| ||||||||| ||||||||  |||||||||||    
T  19536439 tcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 19536507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 4332981 - 4332891
Alignment:
Q  85 acaccgacacataattataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||||||| | |||| ||| | || |||| |||||||||| | |||||||| ||| |||||| ||||||||||||| ||||||    
T  4332981 acaccgacacataattacattgaattat-gtgattttcccaaattattatcagtgtcggcatgtaagtatctgtgccgtgtccggtgtccgt 4332891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 21616784 - 21616737
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 166  Q
    ||||||||||||||||||||||||||||||| || |||||| ||||||    
T  21616784 tttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 21624282 - 21624217
Alignment:
Q  125 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 190  Q
    ||||||||||| |||||||||||||||| || ||| ||||| ||| |||||||| || ||||||||    
T  21624282 aaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtatccgggcttcata 21624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 19536361 - 19536408
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 83  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||    
T  19536361 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac 19536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 19574078 - 19574031
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 83  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||||    
T  19574078 ctatgaagcatggacactcctcgaattaggtgtgtccgacaccgacac 19574031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 143
Target Start/End: Complemental strand, 1328033 - 1327976
Alignment:
Q  85 acaccgacacataattataatgaaatatagcgactttctcaaattattagcggtgtcgg 143  Q
    ||||||||||||||||||| |||| | ||  || |||||||||||||||||||||||||    
T  1328033 acaccgacacataattatactgaattttat-gattttctcaaattattagcggtgtcgg 1327976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 18255945 - 18255991
Alignment:
Q  37 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 83  Q
    |||||||||||||||||||| | ||||| | ||||||||||||||||    
T  18255945 tatgaagcacggacactccttggattaggcgtgtccgacaccgacac 18255991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 34691770 - 34691816
Alignment:
Q  37 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 83  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34691770 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34691816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 34714182 - 34714228
Alignment:
Q  37 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 83  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34714182 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34714228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 36409614 - 36409711
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 166  Q
    |||| |||||| |||  ||||||||||||||||| | | || ||| | || ||| ||||||||| |||||||||||| ||| |||||||||| ||||||    
T  36409614 tgtcagacaccaacatgacaccgacacataattacactaaattat-gtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtc 36409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 14996265 - 14996333
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 192  Q
    ||||||||||||| |||||||| ||||||| |||||| | ||| | | |||||||| |||||||||||||    
T  14996265 tcaaattattagctgtgtcggcttgtcagtgtccgtgtcatgt-ctgcgtccgtatccgtgcttcatagt 14996333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 18276543 - 18276486
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    |||||||||||||||||||||||||| | ||||| || ||  ||||||||| ||||||    
T  18276543 tttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgt 18276486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 21374740 - 21374810
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtg--ccgtgtccggagtccgtattcgtgcttcatagt 192  Q
    ||||||||||||| |||||||||||| ||| ||||||  | |||||| | |||||||| |||||||||||||    
T  21374740 tcaaattattagctgtgtcggcgtgttagtgtccgtgtccggtgtcc-gtgtccgtatccgtgcttcatagt 21374810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 151
Target Start/End: Original strand, 37411281 - 37411313
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcag 151  Q
    |||||||||||||||||||||||||| ||||||    
T  37411281 tttctcaaattattagcggtgtcggcatgtcag 37411313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 42511322 - 42511358
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtcc 72  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtcc 42511358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 44860394 - 44860320
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgactttctcaaattattagcggtgtc 141  Q
    ||||| ||||| |||| |||||||||||||  |||| | |||| ||| |||| |||||||||||||||||||||||    
T  44860394 tgtccaacaccaacacgacaccgacacatataattacactgaattat-gcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 13422 - 13349
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 192  Q
    ||||||||||||||||  |||||||||||||||| |||||| | | ||||| |||||||| |||||||||||||    
T  13422 tttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 13349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 21905 - 21978
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 192  Q
    ||||||||||||||||  |||||||||||||||| |||||| | | ||||| |||||||| |||||||||||||    
T  21905 tttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 21978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 6427372 - 6427323
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 168  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  6427372 tttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccg 6427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 40917769 - 40917716
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  40917769 tcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtccgt 40917716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 398806 - 398858
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccg 175  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||| |||||    
T  398806 tcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccg 398858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 2896158 - 2896207
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 168  Q
    |||||||||||||||||||||||||||||||||| ||||||  |||||||    
T  2896158 tttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccg 2896207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 5376537 - 5376609
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 192  Q
    ||||| |||||||||||||||||||||||| ||| |||||| |||||||||| || |||| ||||| |||||||    
T  5376537 tttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtccgga-tctgtatacgtgcctcatagt 5376609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 48547938 - 48547991
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacacc 89  Q
    ||||||||||||||||||||||||||||| | | |||||||||||||| |||||    
T  48547938 ctatgaagcacggacactcctcgaattaggcgtatccgacaccgacacgacacc 48547991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 5927381 - 5927449
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||| ||||  |||||||||| |||||| ||||||||| |||||||| ||||||| ||||    
T  5927381 tcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttaatag 5927449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 10572626 - 10572690
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtg 183  Q
    |||||||||||||||| ||||||||||||||||| | | || ||||||||| |||||||| ||||    
T  10572626 tttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtatccgtg 10572690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 48040498 - 48040558
Alignment:
Q  118 ctttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 178  Q
    |||| ||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||||    
T  48040498 ctttttcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtat 48040558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 12443497 - 12443538
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgc 160  Q
    ||||||||||||||||| ||||||||||||| ||||||||||    
T  12443497 tttctcaaattattagctgtgtcggcgtgtccgtatccgtgc 12443538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 152
Target Start/End: Original strand, 17831568 - 17831601
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    ||||||||||||||||||||||||||||||||||    
T  17831568 tttctcaaattattagcggtgtcggcgtgtcagt 17831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 152
Target Start/End: Complemental strand, 36878483 - 36878450
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    ||||||||||||||||||||||||||||||||||    
T  36878483 tttctcaaattattagcggtgtcggcgtgtcagt 36878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 39130804 - 39130876
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||| |||||||||   ||||| |||||||| ||||| || ||||||||| |||||||| ||||||||||||    
T  39130804 tttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtccggtgtccgtatccgtgcttcatag 39130876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 169
Target Start/End: Original strand, 1486703 - 1486796
Alignment:
Q  77 ccgacaccacaccgacac--ataattataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 169  Q
    ||||||| ||||||||||  ||||||| | |||| ||| | || ||| ||||||||||||| ||||| ||||||||||||||||| ||| |||||    
T  1486703 ccgacacgacaccgacacttataattacactgaattat-gtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccgg 1486796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 9709842 - 9709795
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 166  Q
    |||||||||||||||||||||| ||| ||||||| |||||| ||||||    
T  9709842 tttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtc 9709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 34298458 - 34298411
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 166  Q
    |||||||||||||||| |||||||| |||||||| |||||| ||||||    
T  34298458 tttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtc 34298411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 176
Target Start/End: Complemental strand, 38503386 - 38503285
Alignment:
Q  76 accgacaccacaccgacacata--attataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtc 173  Q
    |||||||  |||||||||||||  |||| | |||||||||  || ||||||||||||||||||||||||| |||| ||| |||||| | ||||| | |||    
T  38503386 accgacaggacaccgacacatataattacactgaaatatat-gattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtc 38503288  T
Q  174 cgt 176  Q
    |||    
T  38503287 cgt 38503285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 1262906 - 1262856
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 169  Q
    ||||||||||||||||| ||||||||||||| || | |||| |||||||||    
T  1262906 tttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccgg 1262856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 152
Target Start/End: Original strand, 609495 - 609528
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    |||||||||||||||| |||||||||||||||||    
T  609495 tttctcaaattattagtggtgtcggcgtgtcagt 609528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 152
Target Start/End: Original strand, 3490427 - 3490460
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    ||||||||||||||||| ||||||||||||||||    
T  3490427 tttctcaaattattagcagtgtcggcgtgtcagt 3490460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 152
Target Start/End: Original strand, 19562658 - 19562691
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    ||||||||||||||||| ||||||||||||||||    
T  19562658 tttctcaaattattagcagtgtcggcgtgtcagt 19562691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 48450628 - 48450673
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 168  Q
    ||||||||||||| |||| ||||||||||| |||||| ||||||||    
T  48450628 tcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccg 48450673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 6415038 - 6415078
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    |||||||||| ||||||| ||||||||||||||| ||||||    
T  6415038 tttctcaaataattagcgatgtcggcgtgtcagtgtccgtg 6415078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 18556497 - 18556533
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  18556497 tcaaattattagctgtgtcggcgtgtcagtgtccgtg 18556533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 31015065 - 31014993
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||||||| |||| |||| ||||||  ||||| |||| |||| ||| || | ||||||||||||    
T  31015065 tttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtgcccggtgtctgtgtccgtgcttcatag 31014993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 34315722 - 34315663
Alignment:
Q  131 ttagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||| |||||||| |||||||||||||| |||||||  | ||||||| ||||||||||||    
T  34315722 ttagctgtgtcggcatgtcagtatccgtgtcgtgtccata-tccgtatccgtgcttcatag 34315663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 46348424 - 46348460
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  46348424 tcaaattattagctgtgtcggcgtgtcagtgtccgtg 46348460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 20190 - 20122
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||| |||||||||||||| | |||||| ||||||||| ||||||||  |||||||||||    
T  20190 tcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 20122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 8383279 - 8383207
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||||||||||||||||||||||||||||| | |||||| ||||||| | |||||| | |||||| |||||    
T  8383279 tttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgtccgtgctacatag 8383207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 8842346 - 8842280
Alignment:
Q  125 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||||||||||||||||| ||||| | |||||| ||| ||||| |||||||| ||||||||||||    
T  8842346 aaattattagcggtgtcggcatgtcaatttccgtgtcgtatccggtgtccgtatccgtgcttcatag 8842280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 10335320 - 10335386
Alignment:
Q  116 gactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 182  Q
    |||||| ||||||||||||  |||||||||||||||| |||||| ||||||||| |||||| |||||    
T  10335320 gactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 10335386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 24205078 - 24205135
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||    
T  24205078 tttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 24205135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 79 - 178
Target Start/End: Original strand, 5441029 - 5441128
Alignment:
Q  79 gacaccacaccgacacataattataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga-gtccgta 177  Q
    ||||| ||||||||||||||||  | |||| ||| | || ||||||||||| ||||||||| |||||||||||| || ||| |||||||||| |||||||    
T  5441029 gacacaacaccgacacataattccattgaattat-gtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgtccggatgtccgta 5441127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 155
Target Start/End: Original strand, 8039818 - 8039908
Alignment:
Q  66 catgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagtatc 155  Q
    |||||||||||||||||| |||||||||||||  |||| | |||| ||||   | |||||||||||||||||||||| ||||||||| ||||    
T  8039818 catgtccgacaccgacacgacaccgacacatataattacactgaattatata-attttctcaaattattagcggtgttggcgtgtcaatatc 8039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 4991004 - 4991061
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||||||| ||||||||||||||| |||||||| |||||| ||||| ||| ||||||    
T  4991004 tttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgt 4991061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 5407284 - 5407325
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgc 160  Q
    ||||||||||| ||||||||||||||||||| ||||||||||    
T  5407284 tttctcaaatttttagcggtgtcggcgtgtcggtatccgtgc 5407325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 28918019 - 28917966
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    |||||||||||||  ||||||||||||||| |||||| ||||||||| ||||||    
T  28918019 tcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgt 28917966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 9800062 - 9800014
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 167  Q
    |||||||||||||||| ||||||||||||||||| | |||| |||||||    
T  9800062 tttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 55401093 - 55401025
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||  |||||||||| ||||| |||||| ||| ||||| ||||||||  |||||||||||    
T  55401093 tcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgtatctgtgcttcatag 55401025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 8587062 - 8587129
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 190  Q
    |||||||| |||  |||||||||||||||| |||||| | ||||||| ||||||||  ||||||||||    
T  8587062 tcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgtatctgtgcttcata 8587129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 10318068 - 10318111
Alignment:
Q  116 gactttctcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  10318068 gactttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 10318111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 159
Target Start/End: Complemental strand, 21720785 - 21720746
Alignment:
Q  120 ttctcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  21720785 ttctcaaattattatcggtgtcggcgtgtcagtgtccgtg 21720746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 25064981 - 25064859
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 167  Q
    ||||||||||| |||| | ||| ||||||||||| | | || ||| | || ||| |||||| ||||||||||||||||||||| | || ||| |||||||    
T  25064981 tgtccgacaccaacacgataccaacacataattacactaaattat-gtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtcc 25064883  T
Q  168 ggagtccgtattcgtgcttcatag 191  Q
    || ||| |||  |||| |||||||    
T  25064882 ggtgtctgtacccgtgtttcatag 25064859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 32429417 - 32429488
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 190  Q
    ||||| |||||||||||| |||||| |||||| | | ||||  |||||||| |||||||| |||||||||||    
T  32429417 tttcttaaattattagcgttgtcggagtgtcaatgttcgtgttgtgtccggtgtccgtatacgtgcttcata 32429488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 4466538 - 4466576
Alignment:
Q  34 aactatgaagcacggacactcctcgaattagccatgtcc 72  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  4466538 aactatgaagcacggacactcctcgaataagccgtgtcc 4466576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 5440965 - 5440995
Alignment:
Q  34 aactatgaagcacggacactcctcgaattag 64  Q
    |||||||||||||||||||||||||||||||    
T  5440965 aactatgaagcacggacactcctcgaattag 5440995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 13807275 - 13807237
Alignment:
Q  34 aactatgaagcacggacactcctcgaattagccatgtcc 72  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  13807275 aactatgaaacacggacactcctcgaattaggcatgtcc 13807237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 2620090 - 2620139
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 168  Q
    |||||||||| ||||| ||||||||||||||||| |||| | ||||||||    
T  2620090 tttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgtccg 2620139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 14223890 - 14223962
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 192  Q
    ||||||||||||||| | ||||||||||||| || || ||| ||||||| | ||| || |||||||||||||||    
T  14223890 tttctcaaattattatctgtgtcggcgtgtcggtgtctgtgtcgtgtcc-gtgtctgtgttcgtgcttcatagt 14223962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 15796335 - 15796388
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||||||||| | |||||||||||||| | |||||| ||||||||| ||||||    
T  15796335 tcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15796388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 26492246 - 26492291
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 168  Q
    |||||||||||||  ||||||||||||||| |||||| ||||||||    
T  26492246 tcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccg 26492291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 3865597 - 3865633
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  3865597 tcaaattattagctgtgtcggcgtgtcagtgtccgtg 3865633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 12704029 - 12703989
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    |||||||||||||||| ||||||||||||||  ||||||||    
T  12704029 tttctcaaattattagtggtgtcggcgtgtccatatccgtg 12703989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 27505370 - 27505334
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtcc 72  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcc 27505334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 182
Target Start/End: Complemental strand, 21149 - 21002
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgactttctcaaattatta 133  Q
    |||||||||||||| ||| |||| ||||| | |||| ||||||||||| | ||||||||  |||||||||  ||  ||| | || |||||||||||||||    
T  21149 ctatgaagcacggatacttctcggattaggcgtgtctgacaccgacacgataccgacacatataattataccgacttat-gtgattttctcaaattatta 21051  T
Q  134 gcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 182  Q
     | ||||| || ||||||| |||||| |||||| || |||||| |||||    
T  21050 accgtgtcagcatgtcagtgtccgtgtcgtgtctggtgtccgtgttcgt 21002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 21278 - 21217
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 97  Q
    |||||||||||||| |||||||| ||||| | |||| ||||||||||| | |||||||||||    
T  21278 ctatgaagcacggatactcctcggattaggcgtgtctgacaccgacacgataccgacacata 21217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 21407 - 21346
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 97  Q
    ||||||||||| |||||| |||| ||||| | |||| ||||||||||| | |||||||||||    
T  21407 ctatgaagcacagacacttctcggattaggcgtgtctgacaccgacacgataccgacacata 21346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 8816 - 8763
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||| |||||||||||||||| |||||| ||||||||| ||||||    
T  8816 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 8763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 225305 - 225362
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||    
T  225305 tttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 225362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 241611 - 241559
Alignment:
Q  124 caaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    |||||||||||| |||||||||||||||| |||||| ||||||||| ||||||    
T  241611 caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 241559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 92829 - 92790
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgt 158  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  92829 tttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 178860 - 178925
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttca 188  Q
    ||||||||||||  |||||||||||||||| |||||| ||||||||| |||  ||| |||||||||    
T  178860 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcaatatccgtgcttca 178925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 192286 - 192325
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgt 158  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  192286 tttctcaaattattaacggtgtcggcgtgtcagtgtccgt 192325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000005; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 152
Target Start/End: Original strand, 17345452 - 17345485
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    ||||||||||||||||||||||||||||||||||    
T  17345452 tttctcaaattattagcggtgtcggcgtgtcagt 17345485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 23293027 - 23293080
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||| |||||||||||||| | |||||| ||||||||| ||||||    
T  23293027 tcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 23293080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 152
Target Start/End: Original strand, 35723422 - 35723455
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    ||||||||||||||||||||||||||||||||||    
T  35723422 tttctcaaattattagcggtgtcggcgtgtcagt 35723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 847973 - 847918
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtcc 174  Q
    |||||||||||||||||||  ||||||||||||| || ||| ||||||||| ||||    
T  847973 tttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtcc 847918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 36635346 - 36635296
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 169  Q
    |||||||||||||||| ||||| ||||||||||| |||| | |||||||||    
T  36635346 tttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccgg 36635296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 20633503 - 20633450
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    |||||||||||||||||||| ||||||||| |||||  |||||| || ||||||    
T  20633503 tcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgt 20633450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 24343529 - 24343472
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||||| | ||||||||||||| |  |||||| ||||||||| ||||||    
T  24343529 tttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgt 24343472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 7012088 - 7012048
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    ||||||||||||||| ||||||||||||||| || ||||||    
T  7012088 tttctcaaattattatcggtgtcggcgtgtcggtgtccgtg 7012048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 18844423 - 18844467
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccga 80  Q
    |||||||||||||||||| |||| ||||| | |||||||||||||    
T  18844423 ctatgaagcacggacacttctcggattaggcgtgtccgacaccga 18844467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 28084539 - 28084475
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttc 187  Q
    ||||||| ||||| |||||||||||||||  || ||| ||||||||| ||||||||  |||||||    
T  28084539 tcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtccggtgtccgtatctgtgcttc 28084475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 28470484 - 28470448
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtcc 72  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  28470484 ctatgaagcacggacactcctcggattaggcatgtcc 28470448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 28720894 - 28720827
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||| |||||||| ||||||| | |||| ||||||| | ||| |||| ||||||||||||    
T  28720894 tcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgtcc-gtgtctgtatacgtgcttcatag 28720827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 30298964 - 30298928
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  30298964 tcaaattattagctgtgtcggcgtgtcagtgtccgtg 30298928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 30327832 - 30327796
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  30327832 tcaaattattagctgtgtcggcgtgtcagtgtccgtg 30327796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 151
Target Start/End: Complemental strand, 53256 - 53170
Alignment:
Q  66 catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgactttctcaaattattagcggtgtcggcgtgtcag 151  Q
    ||||||||||||||||||  |||||||||  ||||||| | |||| ||| | || |||||||||||||| ||||| ||||||||||||    
T  53256 catgtccgacaccgacacggcaccgacacttataattacactgaattat-gtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 503 - 556
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||| |||||||||| ||||| |||||| ||||| ||| ||||||    
T  503 tcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgt 556  T

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Target: scaffold0475 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 3338 - 3281
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 176  Q
    ||||| ||||| |||||  ||||| |||||||||||||||| ||||||||| ||||||    
T  3338 tttctaaaattgttagcattgtcgacgtgtcagtatccgtgtcgtgtccggtgtccgt 3281  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 8564 - 8592
Alignment:
Q  36 ctatgaagcacggacactcctcgaattag 64  Q
    |||||||||||||||||||||||||||||    
T  8564 ctatgaagcacggacactcctcgaattag 8592  T

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Target: scaffold0103 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 51829 - 51793
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtatccgtg 159  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  51829 tcaaattattagctgtgtcggcgtgtcagtgtccgtg 51793  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 46778 - 46731
Alignment:
Q  34 aactatgaagcacggacactcctcgaattagccatgtccgacaccgaca 82  Q
    ||||||||||||||||||||||||| ||||| | ||| |||||||||||    
T  46778 aactatgaagcacggacactcctcggattaggcgtgt-cgacaccgaca 46731  T

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