View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1592_low_13 (Length: 235)
Name: NF1592_low_13
Description: NF1592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1592_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 52455804 - 52456002
Alignment:
| Q |
21 |
atagctagtcgtacaaagtacaattttcccttcaactcaacaataagaacaagatgtcatggataattgtggccgactaagttcaaacattcatgaagat |
120 |
Q |
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| T |
52455804 |
atagctagtcgtacaaagtacaattttcccttcaactcaacaatatgaacaagatgtcatggataattgtggccgactaagttcaaacattcatgaagat |
52455903 |
T |
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| Q |
121 |
ctactcccttaataataaggtgatggatgacatggataatataactatgcgaacaataccattttaagttgttactcaatctacgaggtagttacttac |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||| |||| |
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| T |
52455904 |
ttactcccttaataataaggtgatggatgacatggataatataactatgcgaacaataccattttaagttgtaattcaatccacgaggtagttatttac |
52456002 |
T |
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