View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15930_low_21 (Length: 329)
Name: NF15930_low_21
Description: NF15930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15930_low_21 |
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Alignment Details
Target: chr5 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 8 - 313
Target Start/End: Original strand, 34484157 - 34484462
Alignment:
| Q |
8 |
cagcacagacagaaaagaaacttccaaagcagaaaccattcggtattattatgattcattgggtacaaaaaccatttgtattattgttatttttgttgcg |
107 |
Q |
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| T |
34484157 |
cagcacaaacagaaaagaaacttccaaagcagaaaccattcggtattattattattcattgggtacaaaaaccatttgtattattgttaattttgttgcg |
34484256 |
T |
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| Q |
108 |
tagtaaccatataaaattcccaaacaaacattgtgacactaccacaaagtttataaaacaaaacaaaattatgggaattatggagggaagggatcccttt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34484257 |
tagtaaccatataaaattcccaaacaaacattgtgacactaccacaaagtttataaaacaaaacaaaattatgggaattatggagggaagggatcccttt |
34484356 |
T |
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| Q |
208 |
aaacccacaacaaaagaaaacatcctaaccttggcttactagctagctaggacacattacaacaaaacaatctcaacttgatcacataagttcacaagga |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34484357 |
aaacccacaacaaaagaaaacatcctaaccttggcttactagctagctaggacacattacaacaaaacaatctcaacttgatcacataagttcacaagga |
34484456 |
T |
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| Q |
308 |
gtatag |
313 |
Q |
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|||||| |
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| T |
34484457 |
gtatag |
34484462 |
T |
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