View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15930_low_25 (Length: 283)

Name: NF15930_low_25
Description: NF15930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15930_low_25
NF15930_low_25
[»] chr1 (19 HSPs)
chr1 (16-231)||(5056180-5056396)
chr1 (27-98)||(3694007-3694078)
chr1 (16-85)||(3739847-3739916)
chr1 (16-98)||(30693343-30693425)
chr1 (16-86)||(47543607-47543677)
chr1 (26-98)||(37918934-37919006)
chr1 (16-86)||(19758303-19758373)
chr1 (16-79)||(24023963-24024026)
chr1 (26-81)||(30295940-30295995)
chr1 (25-87)||(15343239-15343301)
chr1 (232-266)||(5056092-5056126)
chr1 (16-66)||(35310304-35310354)
chr1 (57-90)||(602600-602633)
chr1 (16-85)||(3739822-3739891)
chr1 (16-85)||(29855091-29855160)
chr1 (25-82)||(33678961-33679018)
chr1 (39-83)||(3564211-3564255)
chr1 (31-87)||(10498357-10498413)
chr1 (46-90)||(27527733-27527777)
[»] chr4 (16 HSPs)
chr4 (16-98)||(54235242-54235324)
chr4 (26-92)||(4423167-4423233)
chr4 (19-98)||(5024659-5024738)
chr4 (44-98)||(5496871-5496925)
chr4 (16-93)||(12276828-12276905)
chr4 (16-77)||(55762905-55762966)
chr4 (25-92)||(36494432-36494499)
chr4 (25-90)||(24788653-24788718)
chr4 (25-90)||(24819542-24819607)
chr4 (36-87)||(18995163-18995213)
chr4 (25-90)||(4479604-4479669)
chr4 (16-77)||(55827282-55827343)
chr4 (25-81)||(3249702-3249758)
chr4 (24-92)||(24980651-24980719)
chr4 (24-92)||(30848616-30848686)
chr4 (16-76)||(54010025-54010085)
[»] chr2 (32 HSPs)
chr2 (16-93)||(10459274-10459351)
chr2 (16-94)||(944779-944857)
chr2 (16-98)||(7932751-7932833)
chr2 (16-98)||(38935383-38935465)
chr2 (24-98)||(43398858-43398932)
chr2 (16-85)||(31469079-31469148)
chr2 (17-92)||(11386318-11386393)
chr2 (30-87)||(33615273-33615330)
chr2 (48-98)||(1862675-1862725)
chr2 (16-98)||(2884264-2884346)
chr2 (33-86)||(19924329-19924382)
chr2 (16-98)||(16564386-16564466)
chr2 (24-79)||(35693934-35693989)
chr2 (16-94)||(16180459-16180537)
chr2 (16-98)||(41374549-41374631)
chr2 (16-81)||(4592447-4592512)
chr2 (16-87)||(25089946-25090016)
chr2 (16-78)||(17437166-17437228)
chr2 (24-98)||(24037604-24037678)
chr2 (16-93)||(4225002-4225079)
chr2 (16-85)||(31469104-31469173)
chr2 (32-79)||(5388841-5388888)
chr2 (16-67)||(15660702-15660753)
chr2 (24-63)||(29291119-29291158)
chr2 (25-64)||(32614154-32614193)
chr2 (16-82)||(5713261-5713327)
chr2 (16-70)||(33829397-33829451)
chr2 (47-96)||(40823551-40823600)
chr2 (25-98)||(43042183-43042256)
chr2 (25-85)||(18007532-18007592)
chr2 (33-69)||(35311233-35311269)
chr2 (44-92)||(36597121-36597169)
[»] chr5 (35 HSPs)
chr5 (16-90)||(15119305-15119379)
chr5 (34-93)||(28023948-28024007)
chr5 (25-91)||(26730081-26730147)
chr5 (16-98)||(30293384-30293466)
chr5 (16-94)||(39030571-39030649)
chr5 (18-87)||(2424469-2424538)
chr5 (16-93)||(42324905-42324982)
chr5 (25-98)||(9956518-9956591)
chr5 (16-92)||(36058767-36058843)
chr5 (44-98)||(9530949-9531003)
chr5 (16-94)||(14646386-14646464)
chr5 (24-98)||(33669947-33670021)
chr5 (38-87)||(17858198-17858247)
chr5 (16-93)||(38958069-38958146)
chr5 (25-93)||(2884046-2884113)
chr5 (26-98)||(20185333-20185404)
chr5 (26-90)||(20219514-20219578)
chr5 (39-98)||(17555964-17556023)
chr5 (16-75)||(26835273-26835332)
chr5 (24-87)||(34252733-34252796)
chr5 (50-92)||(12619661-12619703)
chr5 (16-94)||(15119321-15119399)
chr5 (25-87)||(25467137-25467199)
chr5 (16-93)||(968307-968384)
chr5 (26-90)||(6021971-6022035)
chr5 (16-79)||(2884067-2884130)
chr5 (25-92)||(28023940-28024007)
chr5 (16-87)||(33498369-33498440)
chr5 (25-87)||(5727733-5727794)
chr5 (16-90)||(26746224-26746297)
chr5 (41-87)||(37040136-37040182)
chr5 (16-87)||(11600701-11600771)
chr5 (16-85)||(39030596-39030665)
chr5 (16-79)||(504132-504193)
chr5 (33-85)||(15914048-15914100)
[»] chr8 (11 HSPs)
chr8 (24-93)||(13209980-13210049)
chr8 (25-92)||(33557801-33557868)
chr8 (16-98)||(7974806-7974888)
chr8 (16-98)||(9548069-9548151)
chr8 (24-98)||(28725602-28725675)
chr8 (16-98)||(35901055-35901137)
chr8 (16-90)||(37627938-37628011)
chr8 (34-86)||(11196249-11196301)
chr8 (25-68)||(15114634-15114677)
chr8 (16-93)||(29110984-29111061)
chr8 (27-98)||(29797960-29798034)
[»] chr3 (18 HSPs)
chr3 (25-98)||(47783095-47783168)
chr3 (24-87)||(32221501-32221564)
chr3 (16-87)||(40955786-40955857)
chr3 (39-92)||(15282665-15282718)
chr3 (39-79)||(26439347-26439387)
chr3 (44-83)||(11256561-11256600)
chr3 (39-86)||(46733048-46733095)
chr3 (25-98)||(26104235-26104308)
chr3 (16-57)||(46829103-46829144)
chr3 (14-98)||(30806937-30807021)
chr3 (16-92)||(31280163-31280239)
chr3 (24-83)||(5307343-5307402)
chr3 (17-80)||(22756912-22756974)
chr3 (24-79)||(40905818-40905873)
chr3 (24-86)||(26914481-26914543)
chr3 (25-87)||(45610451-45610513)
chr3 (39-80)||(51812047-51812088)
chr3 (43-87)||(18364203-18364247)
[»] scaffold0067 (1 HSPs)
scaffold0067 (16-98)||(35948-36030)
[»] chr6 (18 HSPs)
chr6 (16-98)||(35003767-35003849)
chr6 (24-93)||(31323830-31323899)
chr6 (25-87)||(2282415-2282477)
chr6 (25-90)||(33822305-33822370)
chr6 (24-98)||(34224387-34224462)
chr6 (26-80)||(31522646-31522700)
chr6 (16-79)||(8437813-8437876)
chr6 (16-94)||(9829899-9829977)
chr6 (32-98)||(30531202-30531268)
chr6 (24-93)||(14446712-14446781)
chr6 (26-79)||(28004662-28004715)
chr6 (24-89)||(34553161-34553226)
chr6 (32-85)||(8186403-8186454)
chr6 (16-94)||(24547196-24547274)
chr6 (16-61)||(7549783-7549828)
chr6 (25-54)||(8834607-8834636)
chr6 (25-66)||(13422149-13422190)
chr6 (41-93)||(9675787-9675839)
[»] chr7 (18 HSPs)
chr7 (25-92)||(18732016-18732083)
chr7 (18-92)||(16866427-16866501)
chr7 (24-90)||(44816483-44816549)
chr7 (16-87)||(5026148-5026219)
chr7 (25-92)||(23971211-23971278)
chr7 (39-98)||(3769773-3769832)
chr7 (16-98)||(4259326-4259408)
chr7 (16-95)||(6803315-6803394)
chr7 (39-98)||(14773502-14773561)
chr7 (39-98)||(15223954-15224013)
chr7 (16-79)||(30794449-30794512)
chr7 (34-94)||(32652430-32652490)
chr7 (24-68)||(34515855-34515899)
chr7 (39-93)||(30483891-30483945)
chr7 (16-69)||(1554884-1554937)
chr7 (16-53)||(16866409-16866446)
chr7 (39-87)||(36035277-36035325)
chr7 (30-66)||(47186899-47186935)
[»] scaffold0097 (1 HSPs)
scaffold0097 (25-95)||(37928-37998)
[»] scaffold0034 (1 HSPs)
scaffold0034 (26-93)||(94964-95031)
[»] scaffold0027 (1 HSPs)
scaffold0027 (24-95)||(13190-13261)
[»] scaffold0236 (1 HSPs)
scaffold0236 (17-79)||(14543-14605)
[»] scaffold0009 (1 HSPs)
scaffold0009 (39-93)||(51246-51300)
[»] scaffold0072 (1 HSPs)
scaffold0072 (24-93)||(20387-20456)
[»] scaffold0126 (1 HSPs)
scaffold0126 (16-98)||(28175-28254)


Alignment Details
Target: chr1 (Bit Score: 173; Significance: 4e-93; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 16 - 231
Target Start/End: Complemental strand, 5056396 - 5056180
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcattgaacggaggggg-agta 114  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||    
T  5056396 aatataaacaaaaattggtcaataaaaattaacgtatttgattcaaaatttgtatcaaatacatcaacttatgttgactcattgaacagaggggggagta 5056297  T
Q  115 tctaatttgtccccaactagatactagtttggtattatttttcgaggaactaaattgtgtcttcactctaaaacgtatttgctatgttggtttaactaat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  5056296 tctaatttgtccccaactagatactagtttggtattatttttcgaggaactaaattgtgtcttcactctaaaacgtatttgctatgttggctgaactaat 5056197  T
Q  215 gcatgatgggattatac 231  Q
    || || |||||||||||    
T  5056196 gcctgttgggattatac 5056180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 3694078 - 3694007
Alignment:
Q  27 aaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  3694078 aaattggtcaacaaaaattaatgtatttgattcaaaatttgtattaaatacatcaatttatgttgactcatt 3694007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 3739916 - 3739847
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaactt 85  Q
    ||||||| |||||||||||||| ||||||||||||||||| || |||||||||| ||||||||| |||||    
T  3739916 aatataagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtaccaaatacattaactt 3739847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 30693343 - 30693425
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||||  |||||||| |||| |||| |||||||||||||||||||||||||| |||||||||||  |||| |||| |||||    
T  30693343 aatataaataaaaattgatcaacaaaaattaatgtatttgattcaaaatttgtaccaaatacatcatattatgttgattcatt 30693425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 47543607 - 47543677
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaactta 86  Q
    |||||||  ||||||||||||| |||| |||||| ||||| ||||||||||||| ||||||||||||||||    
T  47543607 aatataataaaaaattggtcaacaaaaattaatgaatttggttcaaaatttgtaccaaatacatcaactta 47543677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 37919006 - 37918934
Alignment:
Q  26 aaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||| ||||| |||||| |||||||||| || ||||||| |||||||||||||||||||| |||| |||||    
T  37919006 aaaatttgtcaacaaaagtgaatgtatttggtttaaaatttatatcaaatacatcaacttatgttgattcatt 37918934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 19758373 - 19758303
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaactta 86  Q
    |||||||  ||||||||||||| ||||||||||||||||  || | |||||||| ||||||||||||||||    
T  19758373 aatataagtaaaaattggtcaacaaaagttaatgtatttagtttataatttgtaccaaatacatcaactta 19758303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 24024026 - 24023963
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacat 79  Q
    |||||||| |||||||| |||| |||||||||||||| || ||||||||||| |||| ||||||    
T  24024026 aatataacaaaaaattgatcaacaaaagttaatgtatgtggttcaaaatttgcatcagatacat 24023963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 30295940 - 30295995
Alignment:
Q  26 aaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatca 81  Q
    |||||||||||| |||||||| |||||||||||||||| || || |||||||||||    
T  30295940 aaaattggtcaacaaaagttattgtatttgattcaaaaattataccaaatacatca 30295995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 15343239 - 15343301
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    ||||||||||||| |||||| |||  |||||||| |||| |||||| ||||||||||||||||    
T  15343239 aaaaattggtcaacaaaagtcaataaatttgattaaaaaattgtattaaatacatcaacttat 15343301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 266
Target Start/End: Complemental strand, 5056126 - 5056092
Alignment:
Q  232 ggaattatcgggcaaagaagaatatgaaccaaggt 266  Q
    |||||||||||||||||||||||||||| ||||||    
T  5056126 ggaattatcgggcaaagaagaatatgaatcaaggt 5056092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 35310354 - 35310304
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaattt 66  Q
    |||||||  ||||||||||||| |||| ||||||||||||||| |||||||    
T  35310354 aatataagtaaaaattggtcaacaaaaattaatgtatttgatttaaaattt 35310304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 90
Target Start/End: Original strand, 602600 - 602633
Alignment:
Q  57 ttcaaaatttgtatcaaatacatcaacttatatt 90  Q
    |||||||||| |||||||||||||||||||||||    
T  602600 ttcaaaatttatatcaaatacatcaacttatatt 602633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 3739822 - 3739891
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaactt 85  Q
    ||||||| ||||||||||||||  |||||||||||||||| | |||| |||  | ||||||||| |||||    
T  3739822 aatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaactt 3739891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 29855160 - 29855091
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaactt 85  Q
    ||||||| ||||||||| |||| ||||||||||||||||  | |||| |||  | |||||||||||||||    
T  29855160 aatataagcaaaaattgatcaacaaaagttaatgtatttcgtacaaatttttaaccaaatacatcaactt 29855091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 33678961 - 33679018
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaa 82  Q
    ||||| ||||||| |||||||||| |||||||| ||||||||  | ||||||||||||    
T  33678961 aaaaaatggtcaaaaaaagttaatatatttgatccaaaatttaaaccaaatacatcaa 33679018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 3564211 - 3564255
Alignment:
Q  39 aaaagttaatgtatttgattcaaaatttgtatcaaatacatcaac 83  Q
    |||||||||| ||||||||| |||| ||| |||||||||||||||    
T  3564211 aaaagttaatatatttgattaaaaagttggatcaaatacatcaac 3564255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 10498413 - 10498357
Alignment:
Q  31 tggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    ||||||| |||| ||||| |||||  || ||||||||||||||||| ||||||||||    
T  10498413 tggtcaacaaaaattaatatatttagtttaaaatttgtatcaaatatatcaacttat 10498357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 27527777 - 27527733
Alignment:
Q  46 aatgtatttgattcaaaatttgtatcaaatacatcaacttatatt 90  Q
    |||||||||| |||||||||| || || |||||||||||||||||    
T  27527777 aatgtatttggttcaaaatttataccagatacatcaacttatatt 27527733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 54235324 - 54235242
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    ||||||| ||||||||| |||| ||||||||||||||||| |||||||||||||  ||||||||||| |||||||||||||||    
T  54235324 aatataaacaaaaattgctcaacaaaagttaatgtatttggttcaaaatttgtactaaatacatcaatttatattgactcatt 54235242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 4423167 - 4423233
Alignment:
Q  26 aaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattga 92  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  4423167 aaaattgatcaataaaaattaatatatttgattcaaaatttgtaccaaatacatcaacttatattga 4423233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 5024659 - 5024738
Alignment:
Q  19 ataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||| ||||||||| | |||||||||||||||||||  |||||||||| ||||||||||| ||| |||||||||||||||    
T  5024659 ataagcaaaaattgataaataaaagttaatgtatttatttcaaaatttatatcaaatacaacaatttatattgactcatt 5024738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 5496925 - 5496871
Alignment:
Q  44 ttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||||||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  5496925 ttaatgtatttggttcaaaatttgtaccaaataaatcaacttatattgactcatt 5496871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 12276828 - 12276905
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgac 93  Q
    |||||||  ||| ||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||| |||||    
T  12276828 aatataagtaaagattggtcagcaaaagttaatgtatttgattcaaaatttatactaaatacatcaacttatgttgac 12276905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 55762966 - 55762905
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatac 77  Q
    ||||||| |||||||||||||| |||||||||| ||||||||| |||||||||| |||||||    
T  55762966 aatataaacaaaaattggtcaacaaaagttaatatatttgattaaaaatttgtagcaaatac 55762905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 36494432 - 36494499
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattga 92  Q
    |||| |||||||| |||||||||||||||||||||| ||||| ||| |||| |||||| |||||||||    
T  36494432 aaaatttggtcaagaaaagttaatgtatttgattcataatttatattaaatgcatcaatttatattga 36494499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 24788653 - 24788718
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatatt 90  Q
    |||||||  |||| |||| ||||||||||| |||  ||||||||||||||||||||||||||||||    
T  24788653 aaaaattaatcaacaaaaattaatgtatttaatttgaaatttgtatcaaatacatcaacttatatt 24788718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 24819607 - 24819542
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatatt 90  Q
    |||||||  |||| |||| ||||||||||| |||  ||||||||||||||||||||||||||||||    
T  24819607 aaaaattaatcaacaaaaattaatgtatttaatttgaaatttgtatcaaatacatcaacttatatt 24819542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 18995213 - 18995163
Alignment:
Q  36 aataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    |||||||||||||||||||| ||||||||||||| || ||||||||||||||    
T  18995213 aataaaagttaatgtatttggttcaaaatttgta-cagatacatcaacttat 18995163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 4479669 - 4479604
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatatt 90  Q
    |||||||| |||| |||| ||||| ||||||||||||||||| || || |||||| ||||||||||    
T  4479669 aaaaattgatcaacaaaaattaatatatttgattcaaaatttataccagatacattaacttatatt 4479604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 55827343 - 55827282
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatac 77  Q
    ||||||| |||||||||||||| |||||||||| |||||| || ||| |||||| |||||||    
T  55827343 aatataagcaaaaattggtcaacaaaagttaatatatttggttaaaattttgtagcaaatac 55827282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 3249702 - 3249758
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatca 81  Q
    ||||||||||| | ||||||||||||||||| |||||||||| || || ||||||||    
T  3249702 aaaaattggtcgacaaaagttaatgtatttggttcaaaatttataccagatacatca 3249758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 24980719 - 24980651
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattga 92  Q
    |||||||| ||||| |||| |||||||||||  | |||||||||| ||| |||||||||||||| ||||    
T  24980719 caaaaatttgtcaacaaaaattaatgtattttgtacaaaatttgtgtcagatacatcaacttatgttga 24980651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 30848686 - 30848616
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgt--atcaaatacatcaacttatattga 92  Q
    |||||||||||||| |||| |||||||||||  ||||||||||||  || | |||||||||||||| ||||    
T  30848686 caaaaattggtcaacaaaaattaatgtattttgttcaaaatttgtacattagatacatcaacttatgttga 30848616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 54010085 - 54010025
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaata 76  Q
    ||||||| ||||||||  | || |||| ||||||||||||||||||||||| || ||||||    
T  54010085 aatataagcaaaaatttataaacaaaacttaatgtatttgattcaaaatttataccaaata 54010025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 10459274 - 10459351
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgac 93  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||| || ||||||||||| |||||    
T  10459274 aatataagcaaaaattggtcaacaaaagttaatgtatttggttcaaaatttgtatcagatgcatcaacttatgttgac 10459351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 944779 - 944857
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgact 94  Q
    ||||||| ||||||| | |||||||||||||||||||||  ||||||||||||| ||||||||||||||||| ||||||    
T  944779 aatataagcaaaaatcgatcaataaaagttaatgtatttagttcaaaatttgtaccaaatacatcaacttatgttgact 944857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 7932751 - 7932833
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    ||||||| |||||||| ||||| ||||||||| ||||||| |||||||||| ||||| |||||||||||||| ||||||||||    
T  7932751 aatataagcaaaaattagtcaacaaaagttaacgtatttggttcaaaatttatatcagatacatcaacttatgttgactcatt 7932833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 38935465 - 38935383
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    ||||||| ||||||||  |||| ||||||||||||||||  |||||||| |||||||||||||||||||||| ||||||||||    
T  38935465 aatataaacaaaaattactcaacaaaagttaatgtattttgttcaaaatctgtatcaaatacatcaacttatgttgactcatt 38935383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 43398932 - 43398858
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||||| || || ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  43398932 caaaaatttgttaacaaaagttaatgtatttggttcaaaatttgtaccaaatacatcaacttatattgacccatt 43398858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 31469079 - 31469148
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaactt 85  Q
    ||||||| |||||||||||||| ||||||||||||||||| || |||||||||||||||||||| |||||    
T  31469079 aatataagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtatcaaatacattaactt 31469148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 11386318 - 11386393
Alignment:
Q  17 atataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattga 92  Q
    |||||| ||||||||| |||| |||| ||||| ||||| |||||||||||||||||||||||||||||||| ||||    
T  11386318 atataaacaaaaattgatcaacaaaaattaatatatttaattcaaaatttgtatcaaatacatcaacttatgttga 11386393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 33615273 - 33615330
Alignment:
Q  30 ttggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||    
T  33615273 ttggtcaataaatattaatatatttgattcaaaatttgtatcaaatacatcaacttat 33615330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 1862725 - 1862675
Alignment:
Q  48 tgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  1862725 tgtatttgattcaaaatttgtgtcaaatacatcaacttatgttgactcatt 1862675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 2884264 - 2884346
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||||  ||||||| ||||| |||| |||||||||||| |||||||||| ||||||||| || || |||||||||||||||    
T  2884264 aatataagtaaaaatttgtcaacaaaaattaatgtatttggttcaaaatttatatcaaatatattaaattatattgactcatt 2884346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 19924329 - 19924382
Alignment:
Q  33 gtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaactta 86  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||||||||||    
T  19924329 gtcaataaaagttaatgtatatggttcaaaatttgtaccaaatacatcaactta 19924382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 16564386 - 16564466
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    ||||||| |||||||||||| | ||| |||| |||  ||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  16564386 aatataagcaaaaattggtctacaaacgttagtgt--ttggttcaaaatttgtaccaaatacatcaacttatgttgactcatt 16564466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 35693934 - 35693989
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacat 79  Q
    ||||||||||||||||||| |||||||||||| || |||||| |||||||||||||    
T  35693934 caaaaattggtcaataaaaattaatgtatttggtttaaaattagtatcaaatacat 35693989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 16180537 - 16180459
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgact 94  Q
    |||||||  |||| |||||||| ||||||||||||||||| |||||||||| |||  |||||||||| |||| ||||||    
T  16180537 aatataagtaaaatttggtcaacaaaagttaatgtatttggttcaaaatttatatttaatacatcaatttatgttgact 16180459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 41374631 - 41374549
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||||  ||||||| |||||  ||||||||||||||||||||||| ||| || ||||||||||||||| | || |||||||    
T  41374631 aatataagtaaaaattagtcaacgaaagttaatgtatttgattcaaagtttataccaaatacatcaacttgtgttcactcatt 41374549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 4592447 - 4592512
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatca 81  Q
    ||||||| |||||| | ||||| |||| |||||||||||||||  |||||||||||||||||||||    
T  4592447 aatataaacaaaaaattgtcaacaaaaattaatgtatttgattttaaatttgtatcaaatacatca 4592512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 25090016 - 25089946
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    ||||||| ||||||||||| || |||| || || |||||| |||||||||||||||||||||| ||||||||    
T  25090016 aatataagcaaaaattggt-aacaaaacttcatatatttgcttcaaaatttgtatcaaatacaacaacttat 25089946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 17437228 - 17437166
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaataca 78  Q
    ||||||| |||||||| ||||| |||| |||||||||||  ||||||||||||| ||||||||    
T  17437228 aatataaacaaaaatttgtcaacaaaaattaatgtatttagttcaaaatttgtaccaaataca 17437166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 24037678 - 24037604
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    ||||||| |||| | | ||||| ||||||||  ||||||||||||| |||||| |||||||||| ||||||||||    
T  24037678 caaaaatgggtcgacataagttgatgtattttgttcaaaatttgtaccaaatatatcaacttatgttgactcatt 24037604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 4225079 - 4225002
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgac 93  Q
    ||||||| ||||| || ||||| ||||||||  |||||||||||||||||| || || ||||||||| |||| |||||    
T  4225079 aatataaacaaaatttagtcaacaaaagttatcgtatttgattcaaaatttataccagatacatcaatttatgttgac 4225002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 31469173 - 31469104
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaactt 85  Q
    ||||||| ||||||||||||||  |||||||||||||||||| |||| |||  | ||||||||| |||||    
T  31469173 aatataagcaaaaattggtcaacgaaagttaatgtatttgatacaaatttttaaccaaatacattaactt 31469104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 5388841 - 5388888
Alignment:
Q  32 ggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacat 79  Q
    |||||| |||| |||||||||||||||||||||||| ||||| |||||    
T  5388841 ggtcaacaaaaattaatgtatttgattcaaaatttggatcaagtacat 5388888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 15660753 - 15660702
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttg 67  Q
    ||||||| ||||||||| |||| | || ||||||||||||||||||||||||    
T  15660753 aatataagcaaaaattgatcaacacaaattaatgtatttgattcaaaatttg 15660702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 29291158 - 29291119
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaa 63  Q
    ||||||||||||||||||||||||| |||||| |||||||    
T  29291158 caaaaattggtcaataaaagttaatatatttggttcaaaa 29291119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 32614154 - 32614193
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaat 64  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  32614154 aaaaattggtcaataaaagttaatgtattttgttcaaaat 32614193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 5713327 - 5713261
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaa 82  Q
    |||||||  |||| ||||||||  ||| |||| |||||| ||||||||||||||| |||||||||||    
T  5713327 aatataaataaaatttggtcaaccaaaattaacgtatttaattcaaaatttgtattaaatacatcaa 5713261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 33829397 - 33829451
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtat 70  Q
    ||||||| |||||||||||||| |||| ||||| |||||| | ||||||||||||    
T  33829397 aatataaacaaaaattggtcaacaaaaattaatatatttggtacaaaatttgtat 33829451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 40823600 - 40823551
Alignment:
Q  47 atgtatttgattcaaaatttgtatcaaatacatcaacttatattgactca 96  Q
    ||||||||| || ||||||| ||||||||||||||| |||| ||||||||    
T  40823600 atgtatttggtttaaaatttatatcaaatacatcaaattatgttgactca 40823551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 43042183 - 43042256
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||| | |||| |||| |||||||||| | |||||||||| ||||| |||||||||||| | || |||||||    
T  43042183 aaaaatcgatcaacaaaatttaatgtattcggttcaaaatttatatcagatacatcaacttttgtttactcatt 43042256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 18007592 - 18007532
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaactt 85  Q
    |||| |||||||| |||| |||| ||||||| | ||||||||||| |||||| ||||||||    
T  18007592 aaaagttggtcaaaaaaaattaacgtatttggtccaaaatttgtaccaaatatatcaactt 18007532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 35311269 - 35311233
Alignment:
Q  33 gtcaataaaagttaatgtatttgattcaaaatttgta 69  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  35311269 gtcaacaaaagttaatgtatttggttcaaaatttgta 35311233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 36597121 - 36597169
Alignment:
Q  44 ttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattga 92  Q
    ||||||||||||||| |||||||||| || |||||||||  ||||||||    
T  36597121 ttaatgtatttgatttaaaatttgtaacagatacatcaatatatattga 36597169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 15119305 - 15119379
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatatt 90  Q
    ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| ||||| || ||||||||||    
T  15119305 aatataagcaaaaattagtcaataaaacttaatgtatttgattcaaaatttgtattaaatatattaacttatatt 15119379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 28024007 - 28023948
Alignment:
Q  34 tcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgac 93  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||    
T  28024007 tcaataaaagttaatgtatttgattcaaaatttgtacaaaatacattaacttatattgac 28023948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 26730147 - 26730081
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattg 91  Q
    |||||||||| || |||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  26730147 aaaaattggttaacaaaagttaatgtatttgattaaaaatttgtatcaaatccatcagcttatattg 26730081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 30293384 - 30293466
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||||  |||| ||| |||| |||||| ||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  30293384 aatataagtaaaatttgatcaacaaaagtcaatgtatttgattcaaaatttatatcaaatacatcaacatatgttgactcatt 30293466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 39030571 - 39030649
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgact 94  Q
    ||||||| |||||||||||||| ||||||||||||||||| || |||||||||| ||||||||| ||||| | ||||||    
T  39030571 aatataagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtaccaaatacattaacttttgttgact 39030649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 2424538 - 2424469
Alignment:
Q  18 tataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||||||||||| || |||||||| |||||    
T  2424538 tataaacaaaaattggtcgataaaagttaatgtatttggttcaaaatttgtaccatatacatcagcttat 2424469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 42324982 - 42324905
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgac 93  Q
    |||||||  ||||||||||||| ||||||||||||||||| || ||||||| || |||||||||||| ||||||||||    
T  42324982 aatataagtaaaaattggtcaacaaaagttaatgtatttgttttaaaatttataccaaatacatcaatttatattgac 42324905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 9956591 - 9956518
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||||||| || |||||||||||||||||||||||||||| || || |||||||||| ||| ||||| ||||    
T  9956591 aaaaattggttaacaaaagttaatgtatttgattcaaaatttataacagatacatcaacatatgttgacccatt 9956518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 36058767 - 36058843
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattga 92  Q
    ||||||| |||||||| |||||| ||| ||||||||| ||||| ||||||||||| ||||| ||||| |||||||||    
T  36058767 aatataaacaaaaatttgtcaattaaaattaatgtatatgatttaaaatttgtataaaatatatcaatttatattga 36058843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 9530949 - 9531003
Alignment:
Q  44 ttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||||||||| |||||||||| ||||||||||| ||| |||||||||||||||    
T  9530949 ttaatgtatttggttcaaaatttatatcaaatacaccaatttatattgactcatt 9531003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 14646464 - 14646386
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgact 94  Q
    ||||||| | ||||||| | ||||||| ||||||||| ||||||||||||||||  |||||||| || |||||||||||    
T  14646464 aatataagcgaaaattgataaataaaaattaatgtatatgattcaaaatttgtactaaatacattaatttatattgact 14646386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 33670021 - 33669947
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||||||||||| ||||||||||||||||| || |||||||||| || |||||  ||||||| ||||| ||||    
T  33670021 caaaaattggtcaaaaaaagttaatgtatttggtttaaaatttgtaccagatacactaacttatgttgacccatt 33669947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 17858198 - 17858247
Alignment:
Q  38 taaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    ||||| |||||||||||| |||||||||||||||| ||||||||||||||    
T  17858198 taaaaattaatgtatttggttcaaaatttgtatcagatacatcaacttat 17858247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 38958069 - 38958146
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgac 93  Q
    |||||||  |||||||| | || ||||||||||||||||| |||||| |||||| |||||||||||||| || |||||    
T  38958069 aatataagtaaaaattgattaacaaaagttaatgtatttggttcaaattttgtaccaaatacatcaactcatgttgac 38958146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 2884046 - 2884113
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgac 93  Q
    |||||||| ||||||||| ||||||||||||||| ||||||||||| |||||||| || || |||||||    
T  2884046 aaaaattgatcaataaaa-ttaatgtatttgatttaaaatttgtattaaatacattaaattttattgac 2884113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 20185404 - 20185333
Alignment:
Q  26 aaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    ||||||||| || |||| |||||||||||| |||||||||||||  ||||||||| ||||||||| |||||||    
T  20185404 aaaattggttaacaaaa-ttaatgtatttggttcaaaatttgtacaaaatacatcgacttatattaactcatt 20185333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 20219514 - 20219578
Alignment:
Q  26 aaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatatt 90  Q
    ||||||| |||| |||||||||| ||||||||||||||||| |  |||||| |||||||||||||    
T  20219514 aaaattgatcaacaaaagttaatatatttgattcaaaatttatgccaaatatatcaacttatatt 20219578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 17556023 - 17555964
Alignment:
Q  39 aaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||||||||||| || |||||||||| ||||||||| |||||||||  ||||||||||    
T  17556023 aaaagttaatgtatgtggttcaaaatttatatcaaatatatcaacttacgttgactcatt 17555964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 26835332 - 26835273
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaat 75  Q
    ||||||| |||||| ||||||| |||||||||| |||||| || ||||||||||||||||    
T  26835332 aatataaacaaaaagtggtcaacaaaagttaatatatttggttaaaaatttgtatcaaat 26835273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 34252733 - 34252796
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    |||||||||||||| ||||||||||||||||| |||||||||| |  || || |||||||||||    
T  34252733 caaaaattggtcaacaaaagttaatgtatttggttcaaaatttatgccacattcatcaacttat 34252796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 12619661 - 12619703
Alignment:
Q  50 tatttgattcaaaatttgtatcaaatacatcaacttatattga 92  Q
    ||||||||||||||||| |||||||||||||||||||| ||||    
T  12619661 tatttgattcaaaatttatatcaaatacatcaacttatgttga 12619703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 15119399 - 15119321
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgact 94  Q
    ||||||| ||||||||||| |||| |||||||| ||||| || |||| |||| ||||||||||| || || ||||||||    
T  15119399 aatataaacaaaaattggttaatataagttaatatatttaatacaaattttgaatcaaatacattaagttttattgact 15119321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 25467199 - 25467137
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    |||||||| || |||||||||||||||| || |||||||||| ||||  ||||||||||||||    
T  25467199 aaaaattgatcgataaaagttaatgtatgtggttcaaaatttatatcggatacatcaacttat 25467137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 968384 - 968307
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgac 93  Q
    |||||||  ||||||  ||||| |||| ||||| |||||  ||||||||||||| |||||||||||||||| ||||||    
T  968384 aatataagtaaaaatgagtcaacaaaaattaatatatttagttcaaaatttgtaccaaatacatcaacttaaattgac 968307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 6022035 - 6021971
Alignment:
Q  26 aaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatatt 90  Q
    ||||||| |||  |||||||||||||||| ||| ||||||| |||||||||||| || |||||||    
T  6022035 aaaattgatcagcaaaagttaatgtatttaatttaaaatttatatcaaatacattaatttatatt 6021971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 2884130 - 2884067
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacat 79  Q
    |||||||  |||||||||||||||||| ||||||||||| || |||| |||  |||||||||||    
T  2884130 aatataagtaaaaattggtcaataaaatttaatgtatttaatacaaattttaaatcaaatacat 2884067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 28023940 - 28024007
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattga 92  Q
    |||||| |||||||| ||||||||||||||  | |||| |||| ||||||||||| ||||| ||||||    
T  28023940 aaaaataggtcaatataagttaatgtattttgtacaaattttgaatcaaatacattaacttttattga 28024007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 33498369 - 33498440
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    ||||||| ||||| |||| ||| |||| | ||| |||||| |||||||||||||  ||||||||||||||||    
T  33498369 aatataagcaaaagttggccaacaaaaatcaatatatttggttcaaaatttgtacaaaatacatcaacttat 33498440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 5727733 - 5727794
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    |||||||||||||||||| ||||| || ||| || |||||||||| || ||||||||||||||    
T  5727733 aaaaattggtcaataaaaattaatata-ttggtttaaaatttgtaccagatacatcaacttat 5727794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 26746297 - 26746224
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatatt 90  Q
    ||||||| ||||||||| |||| ||| |||||| |||||  || |||||||||||||||| ||||| ||||||||    
T  26746297 aatataagcaaaaattgatcaacaaa-gttaatttatttagttaaaaatttgtatcaaatccatcatcttatatt 26746224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 37040136 - 37040182
Alignment:
Q  41 aagttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    |||||||||||||||||| |||||||||| |  ||||||||||||||    
T  37040136 aagttaatgtatttgatttaaaatttgtacctcatacatcaacttat 37040182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 11600771 - 11600701
Alignment:
Q  16 aatataaccaaaaattggtcaataaaa-gttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    ||||||| ||||||||| | ||||||| |||||| ||||||||||||||||| |||  ||||| |||||||||    
T  11600771 aatataaacaaaaattgattaataaaaagttaatatatttgattcaaaatttatat--aatacgtcaacttat 11600701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 39030665 - 39030596
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaactt 85  Q
    ||||||| |||||||| ||||| ||||||||||||||||| | |||| |||  | ||||||||| |||||    
T  39030665 aatataagcaaaaattagtcaacaaaagttaatgtatttggtacaaatttttaaccaaatacattaactt 39030596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 504132 - 504193
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacat 79  Q
    ||||||| ||||||| |||||| |||| |||||  ||||| |||| ||||||||||||||||||    
T  504132 aatataagcaaaaatcggtcaacaaaaattaat--atttggttcagaatttgtatcaaatacat 504193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 15914100 - 15914048
Alignment:
Q  33 gtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaactt 85  Q
    ||||||| ||||| ||||||  ||||||||||||| |||| ||||||||||||    
T  15914100 gtcaatacaagttgatgtatcagattcaaaatttggatcatatacatcaactt 15914048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 13209980 - 13210049
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgac 93  Q
    ||||||||| |||| ||||||||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  13209980 caaaaattgatcaacaaaagttaatgtatttggttcaaaatttgtatcagatacatcaacttatgttgac 13210049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 33557868 - 33557801
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattga 92  Q
    |||||||| |||||||||||||||||||||  ||||||||||||||||||||||| ||||||| ||||    
T  33557868 aaaaattgatcaataaaagttaatgtatttagttcaaaatttgtatcaaatacataaacttatgttga 33557801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 7974888 - 7974806
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    ||||||| |||||||||||||||||||||||||||||||   |||||||||||| ||||||| |||| |||| ||||| ||||    
T  7974888 aatataaacaaaaattggtcaataaaagttaatgtatttttgtcaaaatttgtaccaaatacgtcaatttatgttgacccatt 7974806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 9548151 - 9548069
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    ||||||| ||||||||| |||| |||| ||| | |||||| |||||||||||||  |||||||||||||||| ||||||||||    
T  9548151 aatataaacaaaaattgttcaacaaaaattattatatttggttcaaaatttgtactaaatacatcaacttatgttgactcatt 9548069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 28725602 - 28725675
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||| || || |||||||||||| ||||||||||||    
T  28725602 caaaaattggtcaataaaatttattgtatttgattcagaatttata-cagatacatcaacttttattgactcatt 28725675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 35901137 - 35901055
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    ||||||| ||||||| |||||| ||||||||||||||| |  ||||||||||||  || ||||||||||||| ||||||||||    
T  35901137 aatataagcaaaaataggtcaacaaaagttaatgtattgggctcaaaatttgtactaattacatcaacttatgttgactcatt 35901055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 37628011 - 37627938
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatatt 90  Q
    ||||||| ||||||||  | || |||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  37628011 aatataaacaaaaatttattaacaaaagttaatat-tttgattcaaaatttgtatcaaatacatcaacttatatt 37627938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 11196301 - 11196249
Alignment:
Q  34 tcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaactta 86  Q
    |||| |||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  11196301 tcaacaaaaattaatgtatttaattcaaaatttgtattaaatacatcaactta 11196249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 15114634 - 15114677
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgt 68  Q
    ||||||||||||| |||| |||||||||||||||||||||||||    
T  15114634 aaaaattggtcaacaaaaattaatgtatttgattcaaaatttgt 15114677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 29111061 - 29110984
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgac 93  Q
    ||||||| ||||||||| ||||  ||| |||||||||||| |||||||||| || |||||||||  | ||||||||||    
T  29111061 aatataaacaaaaattgatcaacgaaacttaatgtatttggttcaaaatttataccaaatacattcatttatattgac 29110984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 29798034 - 29797960
Alignment:
Q  27 aaattggtcaataaaagttaatgtatttgat---tcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    ||||||||||| |||| |||||||||||| |   |||||||||||| ||||||||| || |||| || |||||||    
T  29798034 aaattggtcaacaaaaattaatgtatttgttggttcaaaatttgtaccaaatacataaatttatgttaactcatt 29797960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 47783095 - 47783168
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||  ||||| ||||||||||    
T  47783095 aaaaattggtcaaaaaaagttaatgtatttggttcaaaatttgtatcagatacatcggcttatgttgactcatt 47783168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 32221564 - 32221501
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    |||||||| ||||| ||||||||||||||||| ||||||||||||| |||||||||||| ||||    
T  32221564 caaaaattagtcaacaaaagttaatgtatttggttcaaaatttgtaccaaatacatcaatttat 32221501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 40955786 - 40955857
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    |||||||| |||||||| ||||||||| ||| |||||||  |||||||||||||||| |||||| |||||||    
T  40955786 aatataacaaaaaattgatcaataaaaattattgtatttagttcaaaatttgtatcatatacattaacttat 40955857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 15282718 - 15282665
Alignment:
Q  39 aaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattga 92  Q
    |||||||||||||||||||| ||||||||||||| || ||||||||||| ||||    
T  15282718 aaaagttaatgtatttgatttaaaatttgtatcagattcatcaacttatgttga 15282665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 26439347 - 26439387
Alignment:
Q  39 aaaagttaatgtatttgattcaaaatttgtatcaaatacat 79  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  26439347 aaaaattaatgtatttgattcaaaatttgtatcaaatacat 26439387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 83
Target Start/End: Original strand, 11256561 - 11256600
Alignment:
Q  44 ttaatgtatttgattcaaaatttgtatcaaatacatcaac 83  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  11256561 ttaatgtatttgatccaaaatttgtatcaaatacatcaac 11256600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 46733048 - 46733095
Alignment:
Q  39 aaaagttaatgtatttgattcaaaatttgtatcaaatacatcaactta 86  Q
    |||| |||||||||||||||||||||||||||||||| ||||| ||||    
T  46733048 aaaaattaatgtatttgattcaaaatttgtatcaaatgcatcagctta 46733095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 26104235 - 26104308
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||||||| || ||||  ||||||||||  |||||||||||||||||| | ||||| |||| ||||||||||    
T  26104235 aaaaattggttaacaaaaactaatgtatttagttcaaaatttgtatcaaacaaatcaatttatgttgactcatt 26104308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 46829144 - 46829103
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgat 57  Q
    ||||||| |||||||||||||| |||||||||||||||||||    
T  46829144 aatataagcaaaaattggtcaacaaaagttaatgtatttgat 46829103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 30806937 - 30807021
Alignment:
Q  14 agaatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||||||  |||||||| ||||||||| |||||||| ||| | |||||||||||||  | ||| |||||||| ||||| ||||    
T  30806937 agaatataagaaaaaattgatcaataaaaattaatgtacttggtccaaaatttgtatcgcacacaccaacttatgttgacccatt 30807021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 31280163 - 31280239
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattga 92  Q
    |||||||  |||||||| |||| |||| |||||||||||| ||||||||||||| || |||||| || |||| ||||    
T  31280163 aatataagtaaaaattgatcaacaaaatttaatgtatttggttcaaaatttgtaccatatacattaatttatgttga 31280239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 5307343 - 5307402
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaac 83  Q
    ||||||||||||||||||| |||||| ||||  || ||||||||||| | ||||||||||    
T  5307343 caaaaattggtcaataaaaattaatggatttcgtttaaaatttgtattagatacatcaac 5307402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 22756974 - 22756912
Alignment:
Q  17 atataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatc 80  Q
    |||||| ||||||| | |||| ||||||||| |||||||||||||||||| || ||||||||||    
T  22756974 atataaacaaaaat-gatcaacaaaagttaacgtatttgattcaaaatttataccaaatacatc 22756912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 40905818 - 40905873
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacat 79  Q
    |||||||||||||| |||||||||| |||||| |||||||||| || || ||||||    
T  40905818 caaaaattggtcaacaaaagttaatttatttggttcaaaatttataccagatacat 40905873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 26914543 - 26914481
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaactta 86  Q
    ||||||||| |||| |||| ||||||||| || |||||||||| ||  |||||||||||||||    
T  26914543 caaaaattgatcaacaaaaattaatgtatgtggttcaaaatttatactaaatacatcaactta 26914481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 45610451 - 45610513
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    |||||| ||||||  ||| |||||||||||| ||||| |||| |||||||| |||||||||||    
T  45610451 aaaaataggtcaactaaaattaatgtatttggttcaagatttatatcaaattcatcaacttat 45610513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 51812047 - 51812088
Alignment:
Q  39 aaaagttaatgtatttgattcaaaatttgtatcaaatacatc 80  Q
    |||||||||||||||||||| ||||||||  |||||||||||    
T  51812047 aaaagttaatgtatttgatttaaaatttgattcaaatacatc 51812088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 18364203 - 18364247
Alignment:
Q  43 gttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    ||||||||||||  |||||||||||| ||| ||||||||||||||    
T  18364203 gttaatgtattttgttcaaaatttgtgtcagatacatcaacttat 18364247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 35948 - 36030
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||||  |||||||| |||| ||  ||||||||||||| | |||||||||||||||||||||||| |||||||||||||||    
T  35948 aatataaataaaaattgatcaacaaccgttaatgtatttggtacaaaatttgtatcaaatacatcaatttatattgactcatt 36030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 7e-18; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 35003767 - 35003849
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||||  |||||||||| ||||||| ||||||||||||||||||||||||||  ||||| |||||||||| |||| |||||    
T  35003767 aatataagtaaaaattggttaataaaaattaatgtatttgattcaaaatttgtacaaaatatatcaacttatgttgattcatt 35003849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 31323830 - 31323899
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgac 93  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||| || |||||||||||||| |||||    
T  31323830 caaaaattggtcaacaaaagttaatgtattttgttcaaaatttgtaccagatacatcaacttatgttgac 31323899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 2282415 - 2282477
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    ||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||||| ||||    
T  2282415 aaaaattggtcaacaaaagttaatgtatttagttcaaaaattgtatcaaatacatcaatttat 2282477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 33822305 - 33822370
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatatt 90  Q
    |||||||| | || |||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  33822305 aaaaattgattaacaaaagttaatatatttagttcaaaatttgtatcaaatacatcaacttatatt 33822370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 34224462 - 34224387
Alignment:
Q  24 caaaaattggtcaataaaa-gttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    ||||||||||||||||||| |||||||||||| ||| ||||| ||| | | |||||| ||||||||||||||||||    
T  34224462 caaaaattggtcaataaaaagttaatgtatttaatttaaaatgtgtgttagatacataaacttatattgactcatt 34224387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 31522700 - 31522646
Alignment:
Q  26 aaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatc 80  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| || |||||||    
T  31522700 aaaattggtcaacaaaagttaatgcatttgattcaaaatttgtaccagatacatc 31522646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 8437876 - 8437813
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacat 79  Q
    |||||||  |||| || ||||| |||| |||||||||||||||||||||||||| |||||||||    
T  8437876 aatataagtaaaatttagtcaacaaaaattaatgtatttgattcaaaatttgtaccaaatacat 8437813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 9829899 - 9829977
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgact 94  Q
    |||||||  ||||||| ||||| |||| |||||||||||  || |||||||||| |||||||||||| |||| ||||||    
T  9829899 aatataagtaaaaattagtcaacaaaaattaatgtattttgtttaaaatttgtaccaaatacatcaatttatgttgact 9829977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 30531202 - 30531268
Alignment:
Q  32 ggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||| | ||||| ||||||||| |||||| |||||| ||||||||||||||||| |||| |||||    
T  30531202 ggtcaacataagttgatgtatttggttcaaagtttgtaccaaatacatcaacttatgttgagtcatt 30531268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 14446712 - 14446781
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgac 93  Q
    ||||| |||||||| |||||||||||||| |  |||||||||| ||| | ||||||||||||| ||||||    
T  14446712 caaaagttggtcaacaaaagttaatgtatgttgttcaaaatttatattagatacatcaacttacattgac 14446781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 28004715 - 28004662
Alignment:
Q  26 aaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacat 79  Q
    |||||| ||||| |||||||||||||||||  |||||||||||| |||||||||    
T  28004715 aaaattagtcaacaaaagttaatgtatttggctcaaaatttgtaccaaatacat 28004662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 34553226 - 34553161
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatat 89  Q
    ||||||||| ||||||||||| |||||||||  |||||||||||| | | |||||||||| |||||    
T  34553226 caaaaattgttcaataaaagtcaatgtattttcttcaaaatttgtgttagatacatcaacatatat 34553161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 8186403 - 8186454
Alignment:
Q  32 ggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaactt 85  Q
    |||||||||||||| |||||||||||||  |||||| |||| ||||||||||||    
T  8186403 ggtcaataaaagttgatgtatttgattc--aatttggatcagatacatcaactt 8186454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 24547274 - 24547196
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgact 94  Q
    |||||||||| |||| |||||| || |  ||||||| ||| || ||||||| ||||||||||||||| |||| ||||||    
T  24547274 aatataaccataaatcggtcaacaagaactaatgtacttggtttaaaatttatatcaaatacatcaatttatgttgact 24547196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 7549783 - 7549828
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaa 61  Q
    ||||||| |||||||||||  | |||||||||||||||||||||||    
T  7549783 aatataagcaaaaattggtgtacaaaagttaatgtatttgattcaa 7549828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 54
Target Start/End: Original strand, 8834607 - 8834636
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtattt 54  Q
    ||||||||||||||||||||||||||||||    
T  8834607 aaaaattggtcaataaaagttaatgtattt 8834636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 13422149 - 13422190
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaattt 66  Q
    |||||||| ||||||||| ||||||||||||||| |||||||    
T  13422149 aaaaattgctcaataaaaattaatgtatttgatttaaaattt 13422190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 9675839 - 9675787
Alignment:
Q  41 aagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgac 93  Q
    |||||||||||||| || ||||||||||| || || ||||||||||| |||||    
T  9675839 aagttaatgtatttaatacaaaatttgtaccagatgcatcaacttatgttgac 9675787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 18732083 - 18732016
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattga 92  Q
    ||||||||||||||||||||||||||||||| |||||||||| || || ||||||||| |||| ||||    
T  18732083 aaaaattggtcaataaaagttaatgtatttggttcaaaatttataccagatacatcaatttatgttga 18732016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 16866501 - 16866427
Alignment:
Q  18 tataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattga 92  Q
    ||||| |||||||||||||| ||||||||||||||||| || |||||||||| | ||||||| ||||| ||||||    
T  16866501 tataagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtacctaatacattaacttttattga 16866427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 44816483 - 44816549
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatatt 90  Q
    |||||||||| ||| ||||||||||||||||| ||||||||||||| |||||||||||  |||||||    
T  44816483 caaaaattggccaacaaaagttaatgtatttggttcaaaatttgtaccaaatacatcagtttatatt 44816549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 5026148 - 5026219
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    ||||||| ||||||||||| || |||||||||| |||||  | ||||||||||| |||||||||||||||||    
T  5026148 aatataagcaaaaattggttaacaaaagttaatatatttagtccaaaatttgtaccaaatacatcaacttat 5026219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 23971278 - 23971211
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattga 92  Q
    ||||||||||||| |||| | ||| |||||  ||||||||||||| ||||||||||||||||||||||    
T  23971278 aaaaattggtcaacaaaaataaatatatttagttcaaaatttgtaccaaatacatcaacttatattga 23971211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 3769832 - 3769773
Alignment:
Q  39 aaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    ||||||||||||||||  || ||||||||||| |||||||||||||| | ||||||||||    
T  3769832 aaaagttaatgtatttagtttaaaatttgtattaaatacatcaacttgtgttgactcatt 3769773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 4259408 - 4259326
Alignment:
Q  16 aatataaccaaaaattggtc-aataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    ||||||| ||||||||| || || ||||||||||||||||| |||||||||| ||  |||||||| ||||||| ||||||||||    
T  4259408 aatataagcaaaaattgatctaacaaaagttaatgtatttg-ttcaaaatttatagtaaatacattaacttatgttgactcatt 4259326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 6803315 - 6803394
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactc 95  Q
    ||||||| ||||| |||||||| ||||||||||||||||  || |||||||||| |||||||  |||||| | |||||||    
T  6803315 aatataagcaaaatttggtcaacaaaagttaatgtatttagtttaaaatttgtaccaaatacgccaacttgtgttgactc 6803394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 14773502 - 14773561
Alignment:
Q  39 aaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||||||||||| || |||||||||| ||||| |||||||||||||  ||||||||||    
T  14773502 aaaagttaatgtatgtggttcaaaatttatatcagatacatcaacttacgttgactcatt 14773561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 15223954 - 15224013
Alignment:
Q  39 aaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||||||||||| || |||||||||| ||||| |||||||||||||  ||||||||||    
T  15223954 aaaagttaatgtatgtggttcaaaatttatatcagatacatcaacttacgttgactcatt 15224013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 30794449 - 30794512
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacat 79  Q
    |||||||  |||| |||||||| |||| ||||| |||||||||||||||||||| |||||||||    
T  30794449 aatataagtaaaatttggtcaacaaaatttaatatatttgattcaaaatttgtaccaaatacat 30794512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 32652490 - 32652430
Alignment:
Q  34 tcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgact 94  Q
    ||||||||| |||||||||||| |||||| |||||| |||||||| ||| |||| ||||||    
T  32652490 tcaataaaaattaatgtatttggttcaaagtttgtaccaaatacaccaatttatgttgact 32652430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 34515899 - 34515855
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgt 68  Q
    ||||| |||||||||||||||||||||||||  ||||||||||||    
T  34515899 caaaatttggtcaataaaagttaatgtattttgttcaaaatttgt 34515855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 30483891 - 30483945
Alignment:
Q  39 aaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgac 93  Q
    ||||||||| ||||||  ||||||||||| | |||| ||||||||||||||||||    
T  30483891 aaaagttaacgtatttagttcaaaatttggaccaaacacatcaacttatattgac 30483945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 1554937 - 1554884
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgta 69  Q
    ||||||| |||||||||||||||||||||| | ||||||  || ||||||||||    
T  1554937 aatataaacaaaaattggtcaataaaagttcacgtattttgtttaaaatttgta 1554884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 16866409 - 16866446
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatt 53  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  16866409 aatataagcaaaaattgatcaataaaagttaatgtatt 16866446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 36035277 - 36035325
Alignment:
Q  39 aaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttat 87  Q
    |||| |||| |||||||||| ||||||| ||||||| ||||||||||||    
T  36035277 aaaaattaaggtatttgatttaaaatttatatcaaaaacatcaacttat 36035325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 47186935 - 47186899
Alignment:
Q  30 ttggtcaataaaagttaatgtatttgattcaaaattt 66  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  47186935 ttggtcaacaaaagttgatgtatttgattcaaaattt 47186899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 37928 - 37998
Alignment:
Q  25 aaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactc 95  Q
    ||||||| ||||| ||||||||||||||||| || ||||||| || |||||||||||| ||||||||||||    
T  37928 aaaaattagtcaacaaaagttaatgtatttggtttaaaatttataccaaatacatcaatttatattgactc 37998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 94964 - 95031
Alignment:
Q  26 aaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgac 93  Q
    ||||||| ||||||||| ||||||||||   ||||||||||||| ||||||||||||||||| |||||    
T  94964 aaaattgatcaataaaaattaatgtattatgttcaaaatttgtaccaaatacatcaacttatgttgac 95031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 13190 - 13261
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactc 95  Q
    ||||||| | |||| ||||||||||||||||| || ||||||||||  | ||||||||||||||||| ||||    
T  13190 caaaaatggatcaacaaaagttaatgtatttggtttaaaatttgtacaagatacatcaacttatattaactc 13261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 14543 - 14605
Alignment:
Q  17 atataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacat 79  Q
    |||||| ||||||||  ||||| ||||||||||||||||||| ||||||| ||| ||||||||    
T  14543 atataaacaaaaattaatcaatcaaagttaatgtatttgatttaaaatttatattaaatacat 14605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 51300 - 51246
Alignment:
Q  39 aaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgac 93  Q
    |||| |||||||||||  |||||||||| || ||||||||||||||||| |||||    
T  51300 aaaaattaatgtatttagttcaaaatttataccaaatacatcaacttatgttgac 51246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 20456 - 20387
Alignment:
Q  24 caaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgac 93  Q
    ||||||||||||| ||||| |||| |||| || || ||||||||||| |||||||| || |||| |||||    
T  20456 caaaaattggtcagtaaaaattaacgtatgtggtttaaaatttgtattaaatacattaatttatgttgac 20387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 28175 - 28254
Alignment:
Q  16 aatataaccaaaaattggtcaataaaagttaatgtatttgattcaaaatttgtatcaaatacatcaacttatattgactcatt 98  Q
    |||||||  |||||||| | || ||||||||||||||||| ||||||||| ||| |||||   ||||| | ||||||||||||    
T  28175 aatataaataaaaattgattaacaaaagttaatgtatttggttcaaaattcgtaccaaat---tcaacctgtattgactcatt 28254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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