View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15931_high_14 (Length: 379)
Name: NF15931_high_14
Description: NF15931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15931_high_14 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 356; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 1 - 364
Target Start/End: Original strand, 28207022 - 28207385
Alignment:
| Q |
1 |
ctaagttagaatcatcaataacctcaccctcttcatcagaatcatttttatcaaatgaggtaccaatgaaagattctgaaaaacaagtatcaaacaatga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
28207022 |
ctaagttagaatcatcaataacctcaccctcttcatcagaatcatttttatcaaatgaggtaccaatgaaagattctgaaaaacaagtatccaacaatga |
28207121 |
T |
|
| Q |
101 |
acttgttataatcaatgaggatccaaaagggtcatcatcaaattcattatcatcttcaattgagtctaatacaatcttgaactcaagccaaattgttgac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28207122 |
acttgttataatcaatgaggatccaaaagggtcatcatcaaattcattatcatcttcaattgagtctaatacaatcttgaactcaagccaaattgttgac |
28207221 |
T |
|
| Q |
201 |
aacaataatttagaacaagaattggcttctctagggttttatgatgatccaaacaatttgattgaaataccatgggaatcagattatgatctttggaatt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28207222 |
aacaataatttagaacaagaattggcttctctagggttttatgatgatccaaacaatttgattgaaataccatgggaatcagattatgatctttggaatt |
28207321 |
T |
|
| Q |
301 |
ttattgacaacattggaacttatcaatcaaatgttggtgaagaaactgttcaagatgttgttga |
364 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
28207322 |
ttattgacaacattggaacttatcaatcaaatgttggtgaagagactgttcaagatgttgttga |
28207385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University