View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15931_low_13 (Length: 387)
Name: NF15931_low_13
Description: NF15931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15931_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 37191901 - 37192241
Alignment:
| Q |
11 |
gtgaaatgaatctagcaacatgaaacgtggcccatactgattggatggggtcctaactcaacaatagtcatgtgactattgcgtttctgactcacgtggg |
110 |
Q |
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| T |
37191901 |
gtgacatggatctagcaacatgaaacgtggcccatactgattggatggggtcctaactcaacaatagtcatgtgactattgcgtttctgactcacgtggg |
37192000 |
T |
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| Q |
111 |
ttctgtaaaagtggaatcttatgggtgacgtcacgataatgaccgacacgtgtcatgatttcgtgatatttaacgaagaaatttaatgtttccacatccg |
210 |
Q |
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| T |
37192001 |
ttctgtaaaagtggaatcttatgggtgacgtcacgataatgactgacacgtgtcatgatttcgtgatgtttaacgaagaaatttaacgtttccacatccg |
37192100 |
T |
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| Q |
211 |
ttgaataagagacatcctcctttacatggtggaaacatcctcccttgtctctgtaggtcattatcttcacatgataagaggatgtatgcacccgtcgaca |
310 |
Q |
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| T |
37192101 |
ttgaataagagacatcctcctttgcatggtggaaacatcctcccttgtctctgtaggtcattatcttcacatgataagaggatgtatgcacccgtcgaca |
37192200 |
T |
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| Q |
311 |
tgataaatacttcatccaaactagcttaactagttaagcac |
351 |
Q |
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| T |
37192201 |
tgataaatacttcatccaaactagcttaactagttaagcac |
37192241 |
T |
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