View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15932_high_2 (Length: 708)

Name: NF15932_high_2
Description: NF15932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15932_high_2
NF15932_high_2
[»] chr1 (62 HSPs)
chr1 (1-689)||(4520763-4521465)
chr1 (326-492)||(36321590-36321757)
chr1 (346-492)||(33744100-33744246)
chr1 (346-446)||(48811928-48812028)
chr1 (326-468)||(46830121-46830265)
chr1 (384-491)||(15549640-15549747)
chr1 (320-419)||(34861250-34861351)
chr1 (321-435)||(40570657-40570774)
chr1 (344-441)||(36621926-36622023)
chr1 (345-441)||(46370827-46370924)
chr1 (373-497)||(17112728-17112852)
chr1 (323-460)||(17554829-17554967)
chr1 (324-420)||(39973863-39973961)
chr1 (318-420)||(3047832-3047936)
chr1 (319-422)||(16113885-16113990)
chr1 (362-494)||(26322578-26322711)
chr1 (323-494)||(37705847-37706020)
chr1 (349-441)||(3755944-3756036)
chr1 (321-422)||(48947172-48947275)
chr1 (318-405)||(39912262-39912351)
chr1 (373-433)||(4039626-4039686)
chr1 (320-446)||(4771989-4772117)
chr1 (351-422)||(7481409-7481481)
chr1 (345-441)||(9221239-9221335)
chr1 (321-422)||(31042969-31043072)
chr1 (320-413)||(31807824-31807919)
chr1 (352-441)||(28672303-28672393)
chr1 (321-412)||(34232752-34232845)
chr1 (321-438)||(37976797-37976914)
chr1 (347-420)||(64863-64936)
chr1 (347-420)||(2633027-2633100)
chr1 (321-420)||(34445637-34445738)
chr1 (324-422)||(35259081-35259181)
chr1 (382-422)||(5115641-5115681)
chr1 (345-460)||(8836490-8836603)
chr1 (310-422)||(26687495-26687610)
chr1 (382-422)||(40203113-40203153)
chr1 (373-417)||(41649908-41649952)
chr1 (344-423)||(25095602-25095681)
chr1 (385-436)||(30596548-30596599)
chr1 (321-413)||(39914649-39914743)
chr1 (373-436)||(44442272-44442335)
chr1 (343-422)||(47031476-47031555)
chr1 (323-420)||(50875674-50875773)
chr1 (373-415)||(5423788-5423830)
chr1 (346-420)||(42573806-42573880)
chr1 (319-422)||(45584505-45584610)
chr1 (310-417)||(1048710-1048818)
chr1 (382-423)||(2351414-2351455)
chr1 (382-431)||(5787468-5787517)
chr1 (384-417)||(35438069-35438102)
chr1 (349-422)||(37037645-37037718)
chr1 (321-415)||(39150550-39150646)
chr1 (347-490)||(50670364-50670506)
chr1 (321-422)||(48921-49024)
chr1 (329-365)||(290941-290977)
chr1 (329-411)||(5250947-5251031)
chr1 (373-417)||(14758581-14758625)
chr1 (373-417)||(26857231-26857275)
chr1 (318-415)||(39156226-39156325)
chr1 (380-436)||(45359268-45359324)
chr1 (383-423)||(52757431-52757471)
[»] chr6 (16 HSPs)
chr6 (321-492)||(30509284-30509457)
chr6 (323-422)||(25028733-25028833)
chr6 (323-436)||(31702761-31702874)
chr6 (373-423)||(10346028-10346078)
chr6 (326-494)||(7465451-7465620)
chr6 (361-490)||(13070473-13070601)
chr6 (344-405)||(34921560-34921621)
chr6 (319-417)||(35229258-35229358)
chr6 (320-413)||(19293497-19293592)
chr6 (319-417)||(6586457-6586556)
chr6 (361-492)||(13063846-13063977)
chr6 (347-460)||(4590457-4590571)
chr6 (373-423)||(11675662-11675712)
chr6 (319-406)||(13445782-13445871)
chr6 (373-441)||(22020537-22020605)
chr6 (373-441)||(22055034-22055102)
[»] chr8 (47 HSPs)
chr8 (323-473)||(7513279-7513431)
chr8 (321-441)||(36348504-36348627)
chr8 (318-413)||(12782742-12782839)
chr8 (319-490)||(39093050-39093224)
chr8 (324-460)||(2445121-2445258)
chr8 (320-470)||(11077886-11078038)
chr8 (313-390)||(11993796-11993873)
chr8 (318-441)||(22209371-22209496)
chr8 (319-446)||(32646787-32646913)
chr8 (319-438)||(20279574-20279695)
chr8 (319-438)||(21066201-21066322)
chr8 (402-497)||(11995161-11995256)
chr8 (323-436)||(12002237-12002352)
chr8 (323-422)||(42801049-42801149)
chr8 (319-422)||(1876517-1876622)
chr8 (326-492)||(5293708-5293877)
chr8 (326-490)||(8108213-8108381)
chr8 (342-458)||(43631468-43631583)
chr8 (324-422)||(7528262-7528360)
chr8 (323-415)||(9460428-9460522)
chr8 (323-411)||(37564378-37564468)
chr8 (344-460)||(24103049-24103164)
chr8 (320-411)||(31264964-31265057)
chr8 (323-423)||(42760181-42760282)
chr8 (355-439)||(1576380-1576464)
chr8 (346-460)||(27055905-27056019)
chr8 (373-419)||(34336511-34336557)
chr8 (319-413)||(11533198-11533294)
chr8 (361-430)||(39333527-39333595)
chr8 (321-422)||(27801261-27801364)
chr8 (318-415)||(28207589-28207688)
chr8 (322-413)||(31844262-31844354)
chr8 (321-422)||(39691149-39691252)
chr8 (373-461)||(40949380-40949468)
chr8 (327-435)||(36924009-36924119)
chr8 (324-422)||(37166993-37167091)
chr8 (324-420)||(2124103-2124203)
chr8 (321-421)||(30534986-30535088)
chr8 (319-359)||(4573074-4573115)
chr8 (384-417)||(30674974-30675007)
chr8 (313-415)||(1369901-1370005)
chr8 (318-422)||(7044366-7044470)
chr8 (321-415)||(7691327-7691423)
chr8 (373-413)||(8785327-8785367)
chr8 (345-405)||(27776541-27776601)
chr8 (373-436)||(29487080-29487144)
chr8 (319-386)||(38019489-38019554)
[»] chr3 (44 HSPs)
chr3 (320-492)||(39400242-39400416)
chr3 (321-460)||(37708405-37708546)
chr3 (322-489)||(38457184-38457352)
chr3 (368-492)||(52309185-52309309)
chr3 (362-466)||(46711905-46712009)
chr3 (346-491)||(30082852-30082999)
chr3 (319-489)||(48322175-48322345)
chr3 (318-422)||(30463992-30464096)
chr3 (322-441)||(25461440-25461561)
chr3 (319-422)||(45757895-45758000)
chr3 (320-413)||(29611987-29612082)
chr3 (373-492)||(40546349-40546467)
chr3 (312-501)||(45529075-45529266)
chr3 (319-488)||(46188549-46188718)
chr3 (344-461)||(40392386-40392502)
chr3 (346-427)||(50217002-50217082)
chr3 (322-388)||(23642718-23642786)
chr3 (318-423)||(779709-779815)
chr3 (346-432)||(8703339-8703425)
chr3 (346-432)||(9055226-9055312)
chr3 (324-415)||(24313522-24313615)
chr3 (318-422)||(25317770-25317876)
chr3 (318-393)||(46093615-46093692)
chr3 (383-436)||(25548219-25548272)
chr3 (319-422)||(48551006-48551111)
chr3 (362-446)||(50368419-50368501)
chr3 (319-422)||(53040435-53040540)
chr3 (319-413)||(3027029-3027125)
chr3 (346-497)||(39976721-39976872)
chr3 (323-421)||(48180207-48180307)
chr3 (313-382)||(52308976-52309047)
chr3 (373-436)||(11404728-11404791)
chr3 (319-411)||(54290823-54290917)
chr3 (346-423)||(1511329-1511407)
chr3 (346-423)||(41571601-41571679)
chr3 (321-410)||(42846053-42846145)
chr3 (374-411)||(43803992-43804029)
chr3 (402-499)||(47115272-47115368)
chr3 (372-420)||(25061987-25062035)
chr3 (320-356)||(27968167-27968203)
chr3 (319-356)||(28434477-28434516)
chr3 (319-423)||(29099141-29099248)
chr3 (319-429)||(34758895-34759007)
chr3 (373-417)||(49682189-49682233)
[»] chr7 (42 HSPs)
chr7 (351-465)||(42911060-42911174)
chr7 (375-469)||(42890251-42890345)
chr7 (343-467)||(1360528-1360652)
chr7 (344-490)||(33887820-33887965)
chr7 (317-493)||(10031885-10032063)
chr7 (346-493)||(23187162-23187307)
chr7 (323-490)||(9097662-9097830)
chr7 (317-423)||(7596180-7596288)
chr7 (351-494)||(9533482-9533625)
chr7 (318-422)||(34299778-34299884)
chr7 (363-492)||(37129777-37129906)
chr7 (375-441)||(40065799-40065865)
chr7 (323-413)||(44452086-44452176)
chr7 (116-192)||(4334177-4334253)
chr7 (365-464)||(15995902-15996002)
chr7 (344-435)||(676395-676485)
chr7 (322-423)||(35599836-35599939)
chr7 (373-419)||(26804057-26804103)
chr7 (321-492)||(28770445-28770619)
chr7 (318-422)||(47507575-47507681)
chr7 (349-441)||(3256643-3256736)
chr7 (127-192)||(4338424-4338489)
chr7 (345-445)||(28733769-28733870)
chr7 (352-420)||(19619993-19620061)
chr7 (323-415)||(26872827-26872918)
chr7 (323-410)||(30626119-30626207)
chr7 (324-422)||(8237922-8238021)
chr7 (320-359)||(21512992-21513031)
chr7 (321-415)||(34681661-34681756)
chr7 (373-419)||(5248671-5248717)
chr7 (363-429)||(44719424-44719490)
chr7 (320-370)||(46684624-46684674)
chr7 (346-423)||(8920737-8920814)
chr7 (373-422)||(10453486-10453535)
chr7 (321-422)||(17157804-17157908)
chr7 (384-417)||(20397509-20397542)
chr7 (321-415)||(27123242-27123338)
chr7 (578-642)||(39773479-39773544)
chr7 (346-410)||(27338257-27338321)
chr7 (373-417)||(33922780-33922824)
chr7 (374-422)||(40722382-40722430)
chr7 (324-411)||(43224133-43224221)
[»] chr4 (59 HSPs)
chr4 (319-491)||(32055306-32055480)
chr4 (323-489)||(24369378-24369545)
chr4 (342-502)||(37179682-37179842)
chr4 (346-489)||(39827116-39827260)
chr4 (346-493)||(44690225-44690374)
chr4 (313-497)||(50086368-50086553)
chr4 (347-467)||(50343826-50343946)
chr4 (321-411)||(2063444-2063535)
chr4 (318-446)||(42956982-42957113)
chr4 (324-492)||(48097923-48098093)
chr4 (323-489)||(54700812-54700978)
chr4 (351-460)||(10095637-10095746)
chr4 (345-465)||(44670821-44670942)
chr4 (346-441)||(42370329-42370424)
chr4 (326-422)||(53261531-53261629)
chr4 (320-441)||(23016238-23016361)
chr4 (323-423)||(40666939-40667042)
chr4 (320-490)||(47560593-47560764)
chr4 (320-465)||(41370160-41370307)
chr4 (347-469)||(28005231-28005353)
chr4 (321-422)||(36876092-36876194)
chr4 (323-422)||(53737829-53737930)
chr4 (326-419)||(29352444-29352537)
chr4 (324-422)||(41956465-41956565)
chr4 (344-473)||(50774954-50775083)
chr4 (319-422)||(52650725-52650830)
chr4 (578-642)||(52723824-52723889)
chr4 (322-422)||(13800731-13800831)
chr4 (321-436)||(19597171-19597287)
chr4 (318-441)||(39274927-39275051)
chr4 (324-423)||(1696222-1696323)
chr4 (322-411)||(24546754-24546844)
chr4 (318-411)||(49400578-49400672)
chr4 (320-415)||(49532293-49532389)
chr4 (343-424)||(10575981-10576061)
chr4 (407-492)||(32692917-32693002)
chr4 (321-415)||(45900191-45900287)
chr4 (321-405)||(47937832-47937917)
chr4 (373-441)||(24324244-24324312)
chr4 (343-415)||(51834906-51834978)
chr4 (362-441)||(16822280-16822359)
chr4 (375-422)||(24981816-24981863)
chr4 (343-422)||(40252648-40252727)
chr4 (382-433)||(41468115-41468166)
chr4 (373-419)||(5047226-5047272)
chr4 (373-419)||(5091880-5091926)
chr4 (373-423)||(31871089-31871139)
chr4 (373-419)||(53919890-53919936)
chr4 (323-423)||(12329264-12329365)
chr4 (373-422)||(23133083-23133132)
chr4 (322-422)||(25115298-25115399)
chr4 (373-430)||(33982447-33982504)
chr4 (347-415)||(2818355-2818423)
chr4 (383-423)||(18089650-18089690)
chr4 (324-422)||(23136542-23136642)
chr4 (383-423)||(34235945-34235985)
chr4 (320-388)||(43956106-43956174)
chr4 (373-433)||(49144785-49144845)
chr4 (375-419)||(49360068-49360112)
[»] chr2 (61 HSPs)
chr2 (321-468)||(16717579-16717726)
chr2 (322-491)||(13811010-13811179)
chr2 (347-491)||(2825922-2826066)
chr2 (346-494)||(8964387-8964534)
chr2 (320-492)||(3882583-3882757)
chr2 (347-491)||(27133072-27133216)
chr2 (320-446)||(18223081-18223209)
chr2 (373-493)||(2888930-2889050)
chr2 (320-489)||(42924386-42924555)
chr2 (318-438)||(6797163-6797284)
chr2 (323-446)||(18227092-18227217)
chr2 (318-460)||(25622499-25622642)
chr2 (322-406)||(45076179-45076264)
chr2 (321-423)||(13538363-13538468)
chr2 (310-465)||(11001436-11001592)
chr2 (347-489)||(37617357-37617499)
chr2 (323-445)||(20128300-20128424)
chr2 (319-423)||(5961997-5962105)
chr2 (323-430)||(44941108-44941216)
chr2 (323-423)||(6761760-6761862)
chr2 (315-411)||(32859747-32859845)
chr2 (345-410)||(33275940-33276005)
chr2 (351-468)||(35312103-35312220)
chr2 (321-423)||(42966924-42967029)
chr2 (363-435)||(10824649-10824721)
chr2 (324-465)||(14102291-14102435)
chr2 (318-467)||(24762704-24762855)
chr2 (373-436)||(9153495-9153558)
chr2 (344-441)||(2517260-2517358)
chr2 (375-492)||(24765359-24765474)
chr2 (383-441)||(26408357-26408415)
chr2 (318-422)||(31513718-31513823)
chr2 (321-423)||(41543945-41544050)
chr2 (346-436)||(44195502-44195592)
chr2 (323-413)||(431678-431770)
chr2 (326-420)||(6334709-6334805)
chr2 (320-422)||(8789823-8789927)
chr2 (320-411)||(18684327-18684422)
chr2 (364-452)||(35477693-35477782)
chr2 (373-489)||(10204179-10204298)
chr2 (385-441)||(19495237-19495293)
chr2 (373-417)||(33962983-33963027)
chr2 (320-411)||(12075568-12075659)
chr2 (320-420)||(18053054-18053156)
chr2 (375-441)||(24792013-24792080)
chr2 (347-422)||(33454964-33455039)
chr2 (383-422)||(39956342-39956381)
chr2 (382-436)||(11278764-11278818)
chr2 (322-433)||(20683021-20683134)
chr2 (362-460)||(27948007-27948108)
chr2 (384-417)||(5403581-5403614)
chr2 (383-436)||(7271812-7271865)
chr2 (320-430)||(8773700-8773812)
chr2 (351-436)||(9049171-9049256)
chr2 (319-365)||(15816796-15816844)
chr2 (313-415)||(1334926-1335030)
chr2 (373-441)||(8333590-8333658)
chr2 (323-422)||(12848507-12848607)
chr2 (346-422)||(24389658-24389734)
chr2 (373-441)||(44330645-44330713)
chr2 (373-441)||(44365419-44365487)
[»] chr5 (47 HSPs)
chr5 (319-488)||(34032059-34032230)
chr5 (321-430)||(967071-967181)
chr5 (319-489)||(25415832-25416004)
chr5 (326-421)||(32017454-32017550)
chr5 (320-411)||(25437920-25438014)
chr5 (321-390)||(141842-141911)
chr5 (324-423)||(8761898-8761999)
chr5 (373-441)||(27833306-27833374)
chr5 (351-422)||(26663635-26663706)
chr5 (351-422)||(26935230-26935301)
chr5 (346-423)||(27016666-27016743)
chr5 (322-431)||(2816147-2816258)
chr5 (345-417)||(3758194-3758266)
chr5 (318-422)||(779051-779156)
chr5 (392-431)||(42338033-42338072)
chr5 (322-438)||(17098205-17098323)
chr5 (344-390)||(36160312-36160358)
chr5 (319-422)||(41583509-41583614)
chr5 (373-419)||(42265458-42265504)
chr5 (344-441)||(10145356-10145453)
chr5 (373-441)||(22873493-22873562)
chr5 (344-420)||(4695065-4695141)
chr5 (319-422)||(7210896-7211000)
chr5 (362-422)||(12448682-12448742)
chr5 (376-419)||(41520690-41520733)
chr5 (373-419)||(591262-591308)
chr5 (307-370)||(2977726-2977791)
chr5 (321-420)||(8247035-8247136)
chr5 (373-419)||(8415712-8415758)
chr5 (374-436)||(11844267-11844328)
chr5 (381-419)||(13978670-13978708)
chr5 (373-419)||(27146894-27146940)
chr5 (373-419)||(40872262-40872308)
chr5 (347-420)||(14042459-14042532)
chr5 (349-422)||(14309122-14309195)
chr5 (323-415)||(24041065-24041158)
chr5 (319-385)||(29342302-29342370)
chr5 (383-436)||(31889648-31889701)
chr5 (362-441)||(39099880-39099961)
chr5 (320-359)||(2112512-2112552)
chr5 (320-406)||(27650859-27650947)
chr5 (322-415)||(30501182-30501277)
chr5 (322-415)||(30541525-30541620)
chr5 (345-405)||(31914164-31914223)
chr5 (373-441)||(34729110-34729176)
chr5 (330-446)||(36243381-36243495)
chr5 (349-413)||(41568711-41568775)
[»] scaffold0009 (1 HSPs)
scaffold0009 (345-441)||(189063-189159)
[»] scaffold1681 (1 HSPs)
scaffold1681 (319-399)||(644-725)
[»] scaffold0011 (1 HSPs)
scaffold0011 (343-436)||(219182-219275)
[»] scaffold0346 (1 HSPs)
scaffold0346 (116-192)||(11842-11918)
[»] scaffold0633 (1 HSPs)
scaffold0633 (373-417)||(5044-5088)
[»] scaffold0113 (1 HSPs)
scaffold0113 (323-421)||(13910-14007)
[»] scaffold0010 (1 HSPs)
scaffold0010 (324-422)||(26673-26772)
[»] scaffold0182 (1 HSPs)
scaffold0182 (384-417)||(20184-20217)
[»] scaffold0291 (1 HSPs)
scaffold0291 (345-457)||(11664-11776)
[»] scaffold0111 (1 HSPs)
scaffold0111 (362-438)||(38916-38992)


Alignment Details
Target: chr1 (Bit Score: 566; Significance: 0; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 566; E-Value: 0
Query Start/End: Original strand, 1 - 689
Target Start/End: Complemental strand, 4521465 - 4520763
Alignment:
Q  1 tagtctgtctcccacgtgtcttgaactttccagccttgcctctttagaggatttgaatccttttaatcgaaatcaaggcttcgttgaaaccatctattcg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4521465 tagtctgtctcccacgtgtcttgaactttccagccttgcctctttagaggatttgaatccttttaatcgaaatcaaggcttcgttgaaaccatctattcg 4521366  T
Q  101 aaatcctcacttctatcttggacttagagaattctgtggtattagcttcctccttgcctgtcgaaacacatgctcaaaaatacaagctaacaatatcgta 200  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4521365 aaatcctcacttctatcttggacttagagaattatgtggtcttaacttcctccttgcctgtcgaaacacatgctcaaaaatacaagctaacaatattgta 4521266  T
Q  201 ggatacttactacaatgtttcaaaataccatgtttggttaaatcgtttaagtgatgcactcccgtgtgagttcaatttcactcaaactcagtgtaaggtc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4521265 ggatacttactacaatgtttcaaaataccatgtttggttaaatcgtttaagtgatgcactcccgtgtgagttcaatttcactcaaactcagtgtaaggtc 4521166  T
Q  301 caatttcactaa-aaaagaaagggtcttgttaacgagtgctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacattt 399  Q
    |||||||||||| |||||||||||||||||||||||||||  ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4521165 caatttcactaaaaaaagaaagggtcttgttaacgagtgcctcgggcactctttaagcatactaaaacaagcgattattctttaaaaaagttaaacattt 4521066  T
Q  400 caatttccaatgcattgattacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttcccaaaaaga 499  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||  |||||||||||||||||||||||||||    
T  4521065 caatttccaatgcattgattacatgtatttttataaatactttctacatatagtccttaaagagtaccccgggggcaatcgttaacatttcccaaaaaga 4520966  T
Q  500 aattaccattgagttaacactaaattcactcccgaaaacgtaaactcgtgggtcaacactaaagtttgagaactt-aaaggtttagcccttttaattgat 598  Q
    ||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| |||||    
T  4520965 aattaccatcgagttaacactaaattcacttccaaaaacgtaaactcgtgggtcaacgctaaagtttgagaacttgaagggtttagcccttttagttgat 4520866  T
Q  599 gaatacagtgaaatacaaaacaaatagatgaaataactatgtataat------------acaatacagggaaattgattaaatacaatgtaaattaacaa 686  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||    
T  4520865 gaatgcagtgaaatacaaaacaaatagatgaaataactatgtataattcactgaaaaacacaatacagggaaattgattaaatacaatgtaaattaacaa 4520766  T
Q  687 ctt 689  Q
    |||    
T  4520765 ctt 4520763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 326 - 492
Target Start/End: Complemental strand, 36321757 - 36321590
Alignment:
Q  326 ttgttaacgagtgctcc-ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatg 424  Q
    ||||||||| ||| ||| || |||||||||||||||| |||| |||  ||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  36321757 ttgttaacgtgtgttccagggcactctttaagcataccaaaacaagtaattattctttagaaaagttaaacatttcgatttccaatgcattgattacatg 36321658  T
Q  425 tatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttccc 492  Q
    ||||||||||||||||| |||  ||||||||||||| |||| ||| | | || |||||||||||||||    
T  36321657 tatttttataaatacttgctatttatagtccttaaagagtgccccaaggacactcgttaacatttccc 36321590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 346 - 492
Target Start/End: Complemental strand, 33744246 - 33744100
Alignment:
Q  346 cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttcta 445  Q
    ||||||||||||||  |||||||||  |||||| ||| ||||||| ||| ||||| |||| ||||||||||||||||| | |||| ||||||||||||||    
T  33744246 cactctttaagcattttaaaataagtaattatttttttaaaaagtcaaatatttcgattttcaatgcattgattacatattttttcataaatactttcta 33744147  T
Q  446 catatagtccttaaaaagtgtcccgaaggcaatcgttaacatttccc 492  Q
    | ||||||| ||||| ||| ||| ||| ||| | ||||| |||||||    
T  33744146 cttatagtcgttaaagagtatcctgaaagcactagttaatatttccc 33744100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 346 - 446
Target Start/End: Original strand, 48811928 - 48812028
Alignment:
Q  346 cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttcta 445  Q
    |||||||||||| |  |||||||||  |||||||||| ||||||| ||| |||||||| |||||||||||||||||| | |||||||||||||||| |||    
T  48811928 cactctttaagcctgttaaaataagtaattattcttttaaaaagtaaaatatttcaatctccaatgcattgattacacgcatttttataaatacttgcta 48812027  T
Q  446 c 446  Q
    |    
T  48812028 c 48812028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 326 - 468
Target Start/End: Complemental strand, 46830265 - 46830121
Alignment:
Q  326 ttgttaacgagtgctccggaca--ctctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacat 423  Q
    ||||||||||||||||| || |  ||||||||||||  |||||||| | |||||| || ||||||||||||  ||| ||||| ||  ||||||||||||     
T  46830265 ttgttaacgagtgctcctgagatactctttaagcattataaaataaacaattatttttaaaaaaagttaaatgttttaattttcaccgcattgattacac 46830166  T
Q  424 gtatttttataaatactttctacatatagtccttaaaaagtgtcc 468  Q
    || |||| |||||||||| |||| ||||||| ||||| |||||||    
T  46830165 gttttttcataaatacttactacttatagtctttaaagagtgtcc 46830121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 384 - 491
Target Start/End: Original strand, 15549640 - 15549747
Alignment:
Q  384 aaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgtta 483  Q
    ||||||| ||| ||||| |||| ||||||||||||||||   |||||||||||||||| |||| ||||||| ||||| ||||  |||| |||| ||||||    
T  15549640 aaaaagtaaaatatttcgattttcaatgcattgattacacacatttttataaatacttgctacttatagtctttaaagagtggtccgatggcactcgtta 15549739  T
Q  484 acatttcc 491  Q
    ||||||||    
T  15549740 acatttcc 15549747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 320 - 419
Target Start/End: Complemental strand, 34861351 - 34861250
Alignment:
Q  320 agggtcttgttaacgagtgctccgga--cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    |||||||||||||||||||| ||||   |||||||||||||| ||||| ||||  |||||| |||||||| || ||||||||||||||||||| || |||    
T  34861351 agggtcttgttaacgagtgccccgggggcactctttaagcattctaaattaagtaattattttttaaaaatgtcaaacatttcaatttccaatacactga 34861252  T
Q  418 tt 419  Q
    ||    
T  34861251 tt 34861250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 321 - 435
Target Start/End: Original strand, 40570657 - 40570774
Alignment:
Q  321 gggtcttgttaacgagtgctcc--ggacactctttaagc-atactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||||||||||||||| ||  || |||||||||||| || | ||||| ||| |||||||||||||||||| ||||||||| |||||| |  ||||||    
T  40570657 gggtcttgttaacgagtgcccccggggcactctttaagctatccaaaaattagcaattattctttaaaaaagtcaaacatttcgatttcctagacattga 40570756  T
Q  418 ttacatgtatttttataa 435  Q
    ||||||| ||||| ||||    
T  40570757 ttacatgcattttcataa 40570774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 344 - 441
Target Start/End: Original strand, 36621926 - 36622023
Alignment:
Q  344 gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    |||||||||||| |||   ||||||||| |||||||||||||||||||||| ||||  ||||||||  || |||||||||| ||||||| ||||||||    
T  36621926 gacactctttaaacatttcaaaataagcaattattctttaaaaaagttaaatattttgatttccaaaacaatgattacatgcatttttaaaaatactt 36622023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 345 - 441
Target Start/End: Original strand, 46370827 - 46370924
Alignment:
Q  345 acactctttaagcatactaaaataagcgattattctttaaaaaagtt-aaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    ||||||||||||||||  |||| |||| |||||||||||||||| || ||||||||| |||| |||||| |||||||||  ||||||| |||||||||    
T  46370827 acactctttaagcatatcaaaacaagcaattattctttaaaaaaatttaaacatttcgattttcaatgcgttgattacacatatttttttaaatactt 46370924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 373 - 497
Target Start/End: Original strand, 17112728 - 17112852
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaa 472  Q
    ||||||||| |||||||| ||| ||||  |||||||||||||||||||||| |||||| ||||||| ||  ||| ||| || ||||| ||||| ||||      
T  17112728 attattcttcaaaaaagtcaaatattttgatttccaatgcattgattacatatattttcataaatagttagtacttattgttcttaacaagtgccccggg 17112827  T
Q  473 ggcaatcgttaacatttcccaaaaa 497  Q
    |||| || |||||||||||| ||||    
T  17112828 ggcactctttaacatttccctaaaa 17112852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 323 - 460
Target Start/End: Original strand, 17554829 - 17554967
Alignment:
Q  323 gtcttgttaacgagtgctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattac 421  Q
    |||| ||||||||||| || ||| |||||||||| |||   ||||||| | |||||| |||||||||||||||  ||||||||| ||||||||||||||     
T  17554829 gtctcgttaacgagtgttcgggagcactctttaaacatttcaaaataaacaattattttttaaaaaagttaaatgtttcaatttacaatgcattgattat 17554928  T
Q  422 atgtatttttataaatactttctacatatagtccttaaa 460  Q
    || | |||| ||||||| ||  ||| ||| |||||||||    
T  17554929 atattttttcataaatagttattacttatggtccttaaa 17554967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 324 - 420
Target Start/End: Original strand, 39973863 - 39973961
Alignment:
Q  324 tcttgttaacgagtg-ctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    ||||||||||||||| ||||||  |||||||||||||| ||||| ||||  |||||||||| |||| ||||||  ||||||||| ||||||||||||||    
T  39973863 tcttgttaacgagtgtctccggggcactctttaagcatgctaaattaagtaattattcttttaaaatgttaaagttttcaattttcaatgcattgatta 39973961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 318 - 420
Target Start/End: Original strand, 3047832 - 3047936
Alignment:
Q  318 aaagggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    ||||||||||||||| |||||| ||  || |||||||||||||| ||||| ||||  ||| ||||||||||| || |||  |||| ||||||||||||||    
T  3047832 aaagggtcttgttaaagagtgcccccggggcactctttaagcatgctaaattaagtaattgttctttaaaaatgtcaaatttttcgatttccaatgcatt 3047931  T
Q  416 gatta 420  Q
    |||||    
T  3047932 gatta 3047936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 319 - 422
Target Start/End: Original strand, 16113885 - 16113990
Alignment:
Q  319 aagggtcttgttaacgagtgc-tccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattg 416  Q
    ||||||||||||||||||||| |||||  |||||||||||||||||| | ||||  |||||| ||| |||| || |||  ||||||||||||||||| ||    
T  16113885 aagggtcttgttaacgagtgcctccggggcactctttaagcatactatattaagtaattattttttcaaaatgtcaaagttttcaatttccaatgcactg 16113984  T
Q  417 attaca 422  Q
    ||||||    
T  16113985 attaca 16113990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 362 - 494
Target Start/End: Complemental strand, 26322711 - 26322578
Alignment:
Q  362 taaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataa-atactttctacatatagtccttaaa 460  Q
    |||||||||| ||||||||| |||||| | ||||||||| ||||||||  ||||||||||||| ||||| |||| |||||| |||  |||  ||||||||    
T  26322711 taaaataagcaattattcttaaaaaaaatcaaacatttcgatttccaagacattgattacatgcattttcataatatacttactaattatgatccttaaa 26322612  T
Q  461 aagtgtcccgaaggcaatcgttaacatttcccaa 494  Q
     || |  |||||| || |||||||||||| ||||    
T  26322611 gagagctccgaagacactcgttaacattttccaa 26322578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 323 - 494
Target Start/End: Original strand, 37705847 - 37706020
Alignment:
Q  323 gtcttgttaacgagtgctcc-gga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    ||||||||||||||||| || ||| |||||||||||||| | ||||| ||  |||||| |||| |||| | |||  |||  |||| ||||||||| ||||    
T  37705847 gtcttgttaacgagtgcccccggagcactctttaagcattcgaaaatgagtaattattttttagaaaactcaaatgttttgattttcaatgcattaatta 37705946  T
Q  421 catgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttcccaa 494  Q
    || || |||| |||||||||| |||| ||||||| || || |||| |||| ||||| | |||||||||| ||||    
T  37705947 cacgttttttcataaatacttgctacttatagtcattgaagagtgccccggaggcactagttaacattttccaa 37706020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 349 - 441
Target Start/End: Complemental strand, 3756036 - 3755944
Alignment:
Q  349 tctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    ||||||| ||| ||||||||||  |||||||||||||| ||| || ||||| ||||| |||| | ||||||||||  ||||||||||||||||    
T  3756036 tctttaaacattctaaaataagaaattattctttaaaagagtcaatcattttaatttgcaattcgttgattacatacatttttataaatactt 3755944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 321 - 422
Target Start/End: Original strand, 48947172 - 48947275
Alignment:
Q  321 gggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgat 418  Q
    |||| |||||||||||||| ||  || || ||||||||||||||||| ||||  |||||| |||||||| || |||  ||||||||||||||||| ||||    
T  48947172 gggttttgttaacgagtgcccctggggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgat 48947271  T
Q  419 taca 422  Q
    ||||    
T  48947272 taca 48947275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 318 - 405
Target Start/End: Complemental strand, 39912351 - 39912262
Alignment:
Q  318 aaagggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaattt 405  Q
    |||||||||||||||||||||| ||  ||||||||||||||||| ||||| || |   ||||| ||||||||||| ||||| ||||||||    
T  39912351 aaagggtcttgttaacgagtgcccccgggacactctttaagcatgctaaattaggaagttattatttaaaaaagtcaaacaattcaattt 39912262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 373 - 433
Target Start/End: Complemental strand, 4039686 - 4039626
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttat 433  Q
    |||||| | ||||||||| ||| ||||| |||||||||||||||||||||| |||||||||    
T  4039686 attattttataaaaaagtcaaatatttcgatttccaatgcattgattacatatatttttat 4039626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 320 - 446
Target Start/End: Original strand, 4771989 - 4772117
Alignment:
Q  320 agggtcttgttaacgagtgc-tccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||| |||||||||||||| |||||  |||||||||||||||| |||  |||| |||||| ||| |||||||  || ||||| |||| ||||| ||| |    
T  4771989 agggttttgttaacgagtgcctccggggcactctttaagcataccaaatgaagcaattatttttttaaaaagtagaatatttcgattttcaatgtattaa 4772088  T
Q  418 ttacatgtatttttataaatactttctac 446  Q
    |||||   |||||||||||||||| ||||    
T  4772089 ttacacacatttttataaatacttgctac 4772117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 351 - 422
Target Start/End: Complemental strand, 7481481 - 7481409
Alignment:
Q  351 tttaagcatactaaaataagcgattattctttaa-aaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    ||||||||| ||||||||||| |||||||||||| |||||||||| | ||| |||| ||||| ||||||||||    
T  7481481 tttaagcatgctaaaataagcaattattctttaaaaaaagttaaatacttcgattttcaatgtattgattaca 7481409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 345 - 441
Target Start/End: Complemental strand, 9221335 - 9221239
Alignment:
Q  345 acactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    |||||||||||  ||  |||||||| | ||||||||||| |||||||||| ||||| |||||||||||| | | ||||  |||||| ||||||||||    
T  9221335 acactctttaactattttaaaataaacaattattctttagaaaagttaaatatttcgatttccaatgcaattaatacacatattttcataaatactt 9221239  T

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Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 321 - 422
Target Start/End: Original strand, 31042969 - 31043072
Alignment:
Q  321 gggtcttgttaacgagtg-ctccgg-acactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgat 418  Q
    ||||||||||||||| || | |||| ||| ||||||||||| ||||| ||||  |||||| |||||||| || |||  ||||||||| ||||||||||||    
T  31042969 gggtcttgttaacgaatgtccccggcacagtctttaagcattctaaattaagtaattattttttaaaaatgtcaaagttttcaattttcaatgcattgat 31043068  T
Q  419 taca 422  Q
    ||||    
T  31043069 taca 31043072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 320 - 413
Target Start/End: Complemental strand, 31807919 - 31807824
Alignment:
Q  320 agggtcttgttaacgagtgctcc-gga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgca 413  Q
    |||||||||||||||||||| || ||| |||| ||||||||| ||||||||||  ||||||||||||||| || | |  ||||||||| |||||||    
T  31807919 agggtcttgttaacgagtgcccccggagcactatttaagcattctaaaataagtaattattctttaaaaatgtgatagttttcaattttcaatgca 31807824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 352 - 441
Target Start/End: Complemental strand, 28672393 - 28672303
Alignment:
Q  352 ttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgta-tttttataaatactt 441  Q
    |||||||| ||||||||| | |||||| ||||||||||| ||| ||||  ||||  |||||||||||||||  || |||||||||||||||    
T  28672393 ttaagcattctaaaataaacaattattttttaaaaaagtcaaatattttgattttaaatgcattgattacacatattttttataaatactt 28672303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 321 - 412
Target Start/End: Complemental strand, 34232845 - 34232752
Alignment:
Q  321 gggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgc 412  Q
    |||||||||||||||||||||   ||||||||||||||||| || || | ||| |||||||||| ||||||| ||  ||| |||||| ||||||    
T  34232845 gggtcttgttaacgagtgctcacgggacactctttaagcatccttaatttagcaattattcttttaaaaagtcaactattacaattttcaatgc 34232752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 321 - 438
Target Start/End: Original strand, 37976797 - 37976914
Alignment:
Q  321 gggtcttgttaacgagtgctccgg-acactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    |||||||| |||||||||| |||| ||||||||||||||| |||||||||   ||||| |||| ||||||| ||| ||||  |||| |||||  |||| |    
T  37976797 gggtcttgataacgagtgccccgggacactctttaagcattctaaaataaaaaattatacttt-aaaaagtcaaatattttgattttcaatgttttgaat 37976895  T
Q  420 acatgtatttttataaata 438  Q
    ||  |||||||||||||||    
T  37976896 acgcgtatttttataaata 37976914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 64936 - 64863
Alignment:
Q  347 actctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    ||||||||| ||| ||||||||| | ||||||||||||||| |||||| ||||| | || || |||||||||||    
T  64936 actctttaaacattctaaaataaacaattattctttaaaaacgttaaatatttcgaatttcattgcattgatta 64863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 347 - 420
Target Start/End: Original strand, 2633027 - 2633100
Alignment:
Q  347 actctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    ||||||||| ||| ||||||||||| || ||| |||||||||||||||  |||| |||||||||  ||||||||    
T  2633027 actctttaaacattctaaaataagcaataattttttaaaaaagttaaatgtttcgatttccaatatattgatta 2633100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 420
Target Start/End: Original strand, 34445637 - 34445738
Alignment:
Q  321 gggtcttgttaacgagtgctcc-gga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgat 418  Q
    ||||||||||||||||||| || ||| ||||||||||| || | |||| |||  |||| | | ||||||||| ||| ||||| |||||||||||||||||    
T  34445637 gggtcttgttaacgagtgcccccggagcactctttaaggattccaaaagaagaaattaatttataaaaaagtcaaatatttcgatttccaatgcattgat 34445736  T
Q  419 ta 420  Q
    ||    
T  34445737 ta 34445738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 324 - 422
Target Start/End: Complemental strand, 35259181 - 35259081
Alignment:
Q  324 tcttgttaacgagtgc--tccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattac 421  Q
    ||||||||||||||||  || || ||||||||||| || ||||| ||||  |||||| |||||||| || |||  ||||||||||||||||  |||||||    
T  35259181 tcttgttaacgagtgccctcggggcactctttaagtatgctaaattaagaaattattttttaaaaatgtaaaagttttcaatttccaatgcgctgattac 35259082  T
Q  422 a 422  Q
    |    
T  35259081 a 35259081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 382 - 422
Target Start/End: Complemental strand, 5115681 - 5115641
Alignment:
Q  382 taaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    ||||||||||||| |||||||||||||||||||| ||||||    
T  5115681 taaaaaagttaaatatttcaatttccaatgcattaattaca 5115641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 345 - 460
Target Start/End: Complemental strand, 8836603 - 8836490
Alignment:
Q  345 acactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttct 444  Q
    |||||||||||||||    |||||| | |||||||||||||||||| ||| ||||| ||||  | |||||| | ||| || |||||||||||||||| |     
T  8836603 acactctttaagcatttcgaaataaacaattattctttaaaaaagtcaaatatttcgattt--agtgcattaaatacttgcatttttataaatacttacc 8836506  T
Q  445 acatatagtccttaaa 460  Q
    || |||||| ||||||    
T  8836505 acttatagttcttaaa 8836490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 310 - 422
Target Start/End: Original strand, 26687495 - 26687610
Alignment:
Q  310 taaaaaagaaagggtcttgttaacgagtgc--tccggacactctttaagcatactaaaataagcgattat-tctttaaaaaagttaaacatttcaatttc 406  Q
    ||||||| ||| ||| || |||||||||||  || | ||||||||||||||| ||||||||||| || || | || |||||||| ||| ||||| ||||     
T  26687495 taaaaaaaaaaaggtgttattaacgagtgccctcggaacactctttaagcattctaaaataagcaataatcttttaaaaaaagtcaaatatttcgatttt 26687594  T
Q  407 caatgcattgattaca 422  Q
    ||||||||| ||||||    
T  26687595 caatgcattaattaca 26687610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 382 - 422
Target Start/End: Complemental strand, 40203153 - 40203113
Alignment:
Q  382 taaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    ||||||||| ||| |||||||||||||||||||||||||||    
T  40203153 taaaaaagtcaaatatttcaatttccaatgcattgattaca 40203113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 41649908 - 41649952
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||||    
T  41649908 attattccttaaaaaagtttaacatttcaatttcccatgcattga 41649952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 344 - 423
Target Start/End: Original strand, 25095602 - 25095681
Alignment:
Q  344 gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacat 423  Q
    ||||||||||||| || |||||| |||  ||||||   ||||||||| ||| |||||||||| | |||||||||||||||    
T  25095602 gacactctttaaggattctaaaagaagaaattatttcataaaaaagtcaaatatttcaattttcgatgcattgattacat 25095681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 385 - 436
Target Start/End: Complemental strand, 30596599 - 30596548
Alignment:
Q  385 aaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaa 436  Q
    |||||| ||| ||||||||||| |||||||||||||||  ||||||||||||    
T  30596599 aaaagtaaaaaatttcaatttcaaatgcattgattacacatatttttataaa 30596548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 413
Target Start/End: Complemental strand, 39914743 - 39914649
Alignment:
Q  321 gggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgca 413  Q
    |||||||||||||||||||| |  ||||||||||||||||||| ||| | | | ||| |||||| ||||||| ||  ||| |||||| |||||||    
T  39914743 gggtcttgttaacgagtgcttccgggacactctttaagcataccaaatttaacaattgttcttttaaaaagtcaactattacaattttcaatgca 39914649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 436
Target Start/End: Original strand, 44442272 - 44442335
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaa 436  Q
    |||||||||||||||||| ||| |||||||||| |||| |||| | ||||  ||||||||||||    
T  44442272 attattctttaaaaaagtcaaatatttcaattttcaatacattaaatacacatatttttataaa 44442335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 422
Target Start/End: Original strand, 47031476 - 47031555
Alignment:
Q  343 ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    ||||||||||||| ||| ||||||||||  |||||| ||| ||||| | ||| ||||| ||||||||| |||| ||||||    
T  47031476 ggacactctttaaacattctaaaataagtaattatttttttaaaaaataaaatatttcgatttccaatacattcattaca 47031555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 323 - 420
Target Start/End: Original strand, 50875674 - 50875773
Alignment:
Q  323 gtcttgttaacgagtgc-tccggacactctttaagcatactaaaataagcgattattctttaa-aaaagttaaacatttcaatttccaatgcattgatta 420  Q
    |||| |||| ||||||| |||| | ||||||||||||| ||||||  ||  |||||||| ||  |||||| ||| |||||||||||||||||||||||||    
T  50875674 gtctcgttagcgagtgcctccgaatactctttaagcattctaaaaggagaaattattctataggaaaagtcaaatatttcaatttccaatgcattgatta 50875773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 415
Target Start/End: Complemental strand, 5423830 - 5423788
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    |||||||||||||||||||||| | |||||||| |||||||||    
T  5423830 attattctttaaaaaagttaaatagttcaattttcaatgcatt 5423788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 346 - 420
Target Start/End: Complemental strand, 42573880 - 42573806
Alignment:
Q  346 cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    |||||||||||||| ||||| ||||  |||||||||| |||| |||||   ||||||||| ||||||| ||||||    
T  42573880 cactctttaagcatgctaaattaagtaattattcttttaaaatgttaaggttttcaattttcaatgcactgatta 42573806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 422
Target Start/End: Original strand, 45584505 - 45584610
Alignment:
Q  319 aagggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattg 416  Q
    ||||||||||||||||| ||| ||  || ||||||||||| || | |||| |||  |||||| | ||||||||||||| |||| ||||||  ||| ||||    
T  45584505 aagggtcttgttaacgaatgcccccggggcactctttaaggattccaaaagaagaaattattttataaaaaagttaaatattttaatttctgatgtattg 45584604  T
Q  417 attaca 422  Q
    ||||||    
T  45584605 attaca 45584610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 417
Target Start/End: Complemental strand, 1048818 - 1048710
Alignment:
Q  310 taaaaaagaa-agggtcttgttaacgagtgctcc-ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttcc 407  Q
    |||||||||| ||| ||||||||| ||||| | | || |||||||||||||||| ||| |||   ||||||||||| |||||||||| | |||||||| |    
T  1048818 taaaaaagaataggatcttgttaatgagtgtttcagggcactctttaagcataccaaattaaaaaattattcttta-aaaagttaaatagttcaattttc 1048720  T
Q  408 aatgcattga 417  Q
    ||||| ||||    
T  1048719 aatgcgttga 1048710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 2351414 - 2351455
Alignment:
Q  382 taaaaaagttaaacatttcaatttccaatgcattgattacat 423  Q
    ||||||||| |||||||| ||||||| |||||||||||||||    
T  2351414 taaaaaagtcaaacattttaatttccgatgcattgattacat 2351455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 382 - 431
Target Start/End: Complemental strand, 5787517 - 5787468
Alignment:
Q  382 taaaaaagttaaacatttcaatttccaatgcattgattacatgtattttt 431  Q
    ||||| ||||||| |||||||||||||||||||| ||||||  |||||||    
T  5787517 taaaatagttaaatatttcaatttccaatgcattaattacacatattttt 5787468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 417
Target Start/End: Complemental strand, 35438102 - 35438069
Alignment:
Q  384 aaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||||||||||||| ||||||||||||||||    
T  35438102 aaaaagttaaacatttcgatttccaatgcattga 35438069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 37037645 - 37037718
Alignment:
Q  349 tctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    |||||||||||  |||||  ||  |||||| || ||||||||||||  |||||||||||||| |||||||||||    
T  37037645 tctttaagcattttaaaaatagtaattatttttaaaaaaagttaaatgtttcaatttccaatacattgattaca 37037718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 321 - 415
Target Start/End: Original strand, 39150550 - 39150646
Alignment:
Q  321 gggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    ||||||||||||||||||| ||  || |||||||||||||| ||||| | ||  |||||||||  ||||||| ||  ||| |||||| |||||||||    
T  39150550 gggtcttgttaacgagtgcccccggggcactctttaagcatcctaaatttagtaattattcttgtaaaaagtcaactattacaatttacaatgcatt 39150646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 490
Target Start/End: Complemental strand, 50670506 - 50670364
Alignment:
Q  347 actctttaagcatactaaaataagcgattattctttaaaaaagtt-aaacatttcaatttccaatgcattgattacatgtatttttataaatactttcta 445  Q
    |||| |||||||| ||||||| | | ||||||||||||||||  | ||| ||||   ||||||||||||  |||||||| ||||| |||||||||| |||    
T  50670506 actccttaagcattctaaaatcaacaattattctttaaaaaaaatcaaatattttgttttccaatgcatctattacatgcattttcataaatacttacta 50670407  T
Q  446 catatagtccttaaaaagtgtcccgaaggcaatcgttaacatttc 490  Q
      |||| ||||| || ||||| | ||  ||| |||||||||||||    
T  50670406 tttataatccttgaagagtgttcgga--gcactcgttaacatttc 50670364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 321 - 422
Target Start/End: Complemental strand, 49024 - 48921
Alignment:
Q  321 gggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgat 418  Q
    ||||||||||||||||| | ||  |||||||| |||| ||| ||||| ||||  ||||||||| ||||| || |||  ||||||||| |||||||  |||    
T  49024 gggtcttgttaacgagttcccctaggacactcgttaatcatgctaaattaagtaattattcttgaaaaatgtaaaagttttcaattttcaatgcaccgat 48925  T
Q  419 taca 422  Q
    ||||    
T  48924 taca 48921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 290977 - 290941
Alignment:
Q  329 ttaacgagtgctccggacactctttaagcatactaaa 365  Q
    |||||||||| |||||||||||||||||||| |||||    
T  290977 ttaacgagtgttccggacactctttaagcatgctaaa 290941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 329 - 411
Target Start/End: Complemental strand, 5251031 - 5250947
Alignment:
Q  329 ttaacgagtgc-tccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatg 411  Q
    ||||||||||| |||||| |||||||||| ||||||||| || |   ||||||||||||||||| ||||| || ||||| |||||    
T  5251031 ttaacgagtgcctccggagcactctttaaacatactaaattaggaagttattctttaaaaaagtcaaacagtttaattttcaatg 5250947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 14758581 - 14758625
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||| ||||||||||| ||||||||||||| | |||||||||    
T  14758581 attattccttaaaaaagtttaacatttcaattttcgatgcattga 14758625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 26857275 - 26857231
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    |||||||||||||||||||||| | || ||||| |||||||||||    
T  26857275 attattctttaaaaaagttaaatagtttaattttcaatgcattga 26857231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 318 - 415
Target Start/End: Original strand, 39156226 - 39156325
Alignment:
Q  318 aaagggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    |||||||||||||||||||||| ||   ||||||||||||||||   ||| | ||  |||||||||| ||||||| ||  | | ||||||||||||||||    
T  39156226 aaagggtcttgttaacgagtgcccctgagacactctttaagcatcaaaaatttagtaattattcttttaaaaagtcaactactacaatttccaatgcatt 39156325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 380 - 436
Target Start/End: Complemental strand, 45359324 - 45359268
Alignment:
Q  380 tttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaa 436  Q
    ||||||||||||||| | |||||||| ||||||||||| || ||| ||||| |||||    
T  45359324 tttaaaaaagttaaatagttcaattttcaatgcattgaatatatgaattttcataaa 45359268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 383 - 423
Target Start/End: Original strand, 52757431 - 52757471
Alignment:
Q  383 aaaaaagttaaacatttcaatttccaatgcattgattacat 423  Q
    |||||||| ||| |||||||||||||||||||| |||||||    
T  52757431 aaaaaagtcaaatatttcaatttccaatgcatttattacat 52757471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 3e-50; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 321 - 492
Target Start/End: Original strand, 30509284 - 30509457
Alignment:
Q  321 gggtcttgttaacgagtg-ctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgat 418  Q
    |||||||||||||||||| ||||||| |||||||||||||||| ||||||||| |||||||||||||||| | ||||||||| |||| ||||||||||||    
T  30509284 gggtcttgttaacgagtgtctccggaacactctttaagcataccaaaataagcaattattctttaaaaaaatcaaacatttcgattttcaatgcattgat 30509383  T
Q  419 tacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttccc 492  Q
    ||||||||||||||||||||||| |||  ||||||||||||| | || |||||||||| || ||||||||||||    
T  30509384 tacatgtatttttataaatacttgctatttatagtccttaaagattgccccgaaggcactcattaacatttccc 30509457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 323 - 422
Target Start/End: Complemental strand, 25028833 - 25028733
Alignment:
Q  323 gtcttgttaacgagtgc-tccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattac 421  Q
    ||||||||||||| ||| |||||||||||||||| ||| | ||| ||    |||||||||||||||||| ||||| |||||||| ||||||||||| |||    
T  25028833 gtcttgttaacgaatgcctccggacactctttaaacattcaaaattagaaaattattctttaaaaaagtcaaacagttcaattttcaatgcattgaatac 25028734  T
Q  422 a 422  Q
    |    
T  25028733 a 25028733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 436
Target Start/End: Complemental strand, 31702874 - 31702761
Alignment:
Q  323 gtcttgttaacgagtgctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    ||||||||||||||||  | || ||||||||||| ||   |||| |||  |||||| | ||||||||||||  |||| |||||| |||||||||||||||    
T  31702874 gtcttgttaacgagtgtccggggcactctttaagaatttcaaaagaagaaattattttataaaaaagttaagtattttaatttctaatgcattgattaca 31702775  T
Q  423 tgtatttttataaa 436  Q
      ||||||||||||    
T  31702774 catatttttataaa 31702761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 10346078 - 10346028
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacat 423  Q
    |||||| ||||||||||||||| | |||||||| |||||||||||||||||    
T  10346078 attattttttaaaaaagttaaaaacttcaattttcaatgcattgattacat 10346028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 326 - 494
Target Start/End: Original strand, 7465451 - 7465620
Alignment:
Q  326 ttgttaacgagtgctcc-ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatg 424  Q
    |||||||||||||| || || |||| |||||| || || ||| |||  ||| |||  ||||||||| ||| |||||||||||| |||||||||||||||     
T  7465451 ttgttaacgagtgcccccgggcactttttaaggattcttaaagaagaaattgttccataaaaaagtcaaatatttcaatttccgatgcattgattacata 7465550  T
Q  425 tatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttcccaa 494  Q
     ||||| | ||| | ||   | ||| ||  |||||| ||||||||| || || |||||||||||||||||    
T  7465551 aattttcaaaaagagttatcatataaaggtcttaaagagtgtcccggagacactcgttaacatttcccaa 7465620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 361 - 490
Target Start/End: Complemental strand, 13070601 - 13070473
Alignment:
Q  361 ctaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctacatatagtccttaaa 460  Q
    ||||||||||| || ||| ||| |||||||||||  ||   ||||||||| |||||||||||  | |||| ||||||| || |||  ||||||| |||||    
T  13070601 ctaaaataagcaataatttttttaaaaagttaaatgttgtgatttccaatacattgattacacattttttcataaatagttactatttatagtc-ttaaa 13070503  T
Q  461 aagtgtcccgaaggcaatcgttaacatttc 490  Q
     |||||| || ||||| |||||||||||||    
T  13070502 gagtgtctcggaggcactcgttaacatttc 13070473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 405
Target Start/End: Original strand, 34921560 - 34921621
Alignment:
Q  344 gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaattt 405  Q
    |||| |||||| |||| ||||||||| | |||||||||||||||||||||| |||| |||||    
T  34921560 gacattctttaggcattctaaaataatcaattattctttaaaaaagttaaatattttaattt 34921621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 417
Target Start/End: Original strand, 35229258 - 35229358
Alignment:
Q  319 aagggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattg 416  Q
    ||||||||||||||||||||| ||  |||||||||||||| |  | ||| | |||||||||||||| ||||||| | | ||| ||| ||||||| |||||    
T  35229258 aagggtcttgttaacgagtgcccccgggacactctttaaggaacccaaatttagcgattattctttcaaaaagtcacatattacaaattccaatacattg 35229357  T
Q  417 a 417  Q
    |    
T  35229358 a 35229358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 320 - 413
Target Start/End: Complemental strand, 19293592 - 19293497
Alignment:
Q  320 agggtcttgttaacgagtg--ctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgca 413  Q
    |||||||| ||||||||||  ||| ||||||||||||||||| ||||| | | | |||||| ||| ||||||||||  ||| |||||||| |||||    
T  19293592 agggtcttattaacgagtgttctcgggacactctttaagcatcctaaatttaacaattattattttaaaaagttaactattacaatttccgatgca 19293497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 417
Target Start/End: Complemental strand, 6586556 - 6586457
Alignment:
Q  319 aagggtcttgttaacgagtgctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||||||||||||| ||| | ||  |||||||||||||||||||| || |  |||| ||||| ||||||| | | | |||||||||| |||||||||    
T  6586556 aagggtcttgttaacgattgccctggggcactctttaagcatactaaattaggaaattaatctttgaaaaagtcagatagttcaatttccgatgcattga 6586457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 492
Target Start/End: Complemental strand, 13063977 - 13063846
Alignment:
Q  361 ctaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctacatatagtccttaaa 460  Q
    ||||||||| | || ||| ||||||||||| |||  ||   ||||||||| |||||||||||    |||| ||||||| || |||  |||||||||||||    
T  13063977 ctaaaataaacaataattttttaaaaaagtcaaatgttgtgatttccaatacattgattacacactttttcataaatagttactatttatagtccttaaa 13063878  T
Q  461 aagtgtcccgaaggcaatcgttaacatttccc 492  Q
     |||||| ||||| || |||| ||||||||||    
T  13063877 gagtgtctcgaagacactcgtgaacatttccc 13063846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 347 - 460
Target Start/End: Complemental strand, 4590571 - 4590457
Alignment:
Q  347 actctttaagcatactaaaataagcgattattctttaaaaaagtt-aaacatttcaatttccaatgcattgattacatgtatttttataaatactttcta 445  Q
    |||| |||| ||| ||||||||||| |||| | || ||||||  | |||| ||| ||||||||||||||| ||||||  | |||||||||||||||  ||    
T  4590571 actccttaaacattctaaaataagcaattacttttaaaaaaaaatcaaacgttttaatttccaatgcattaattacaaatttttttataaatacttatta 4590472  T
Q  446 catatagtccttaaa 460  Q
    | ||||||| |||||    
T  4590471 cttatagtcgttaaa 4590457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 423
Target Start/End: Original strand, 11675662 - 11675712
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacat 423  Q
    ||||||| |||||||||| ||| |||||||||||||| ||||| |||||||    
T  11675662 attattcattaaaaaagtcaaaaatttcaatttccaacgcattaattacat 11675712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 319 - 406
Target Start/End: Complemental strand, 13445871 - 13445782
Alignment:
Q  319 aagggtcttgttaacgagtg-ctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttc 406  Q
    |||||||||||||||||||| | ||||  |||||||||||||| ||||| ||||  | ||||||||||||| || |||  ||||||||||    
T  13445871 aagggtcttgttaacgagtgtccccggtgcactctttaagcatgctaaattaagtaagtattctttaaaaatgtgaaagttttcaatttc 13445782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 373 - 441
Target Start/End: Complemental strand, 22020605 - 22020537
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    |||||| ||||||||||| ||| | | |||||||||||||||||||| |||  ||||| ||||| ||||    
T  22020605 attattatttaaaaaagtcaaaaactccaatttccaatgcattgatttcataaattttgataaaaactt 22020537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 373 - 441
Target Start/End: Complemental strand, 22055102 - 22055034
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    |||||| ||||||||||| ||| | | |||||||||||||||||||| |||  ||||| ||||| ||||    
T  22055102 attattatttaaaaaagtcaaaaactccaatttccaatgcattgatttcataaattttgataaaaactt 22055034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 4e-43; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 323 - 473
Target Start/End: Complemental strand, 7513431 - 7513279
Alignment:
Q  323 gtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    |||||||||||||||| |||  || |||||||||||||||  |||| |||| ||||||||||| |||| ||||||||||| |||| ||||||||||||||    
T  7513431 gtcttgttaacgagtgttcccggggcactctttaagcatatcaaaacaagcaattattctttagaaaaattaaacatttcgattttcaatgcattgatta 7513332  T
Q  421 catgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaag 473  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||||||||||    
T  7513331 catgtatttttataaatacttgctatttatagtccttaaaaagtgtcccgaag 7513279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 321 - 441
Target Start/End: Complemental strand, 36348627 - 36348504
Alignment:
Q  321 gggtcttgttaacgagtg-ctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgat 418  Q
    ||||||||||||||| || ||||||  |||| |||||||| |||||||||||| |||||||||||||||||||||||||||  |||| ||||||||||||    
T  36348627 gggtcttgttaacgaatgtctccggggcactttttaagcacactaaaataagcaattattctttaaaaaagttaaacattttgattttcaatgcattgat 36348528  T
Q  419 tacatgta-tttttataaatactt 441  Q
    |||||||| ||| |||||||||||    
T  36348527 tacatgtactttatataaatactt 36348504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 318 - 413
Target Start/End: Original strand, 12782742 - 12782839
Alignment:
Q  318 aaagggtcttgttaacgagtg-ctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgca 413  Q
    |||||||||||||||||| || ||||||| ||||||||||||||||||||||| || ||||||||||||||||||| || ||||| ||||||||||||    
T  12782742 aaagggtcttgttaacgaatgtctccggaacactctttaagcatactaaaatatgcaattattctttaaaaaagttgaatatttcgatttccaatgca 12782839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 319 - 490
Target Start/End: Original strand, 39093050 - 39093224
Alignment:
Q  319 aagggtcttgttaacgagtgctcc--ggacactctttaagcatactaaa-ataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    ||||||||||||||||||||  ||  ||  ||||||||||||||| ||| | |||| ||||||||||||||||||  || ||||| | ||||||||||||    
T  39093050 aagggtcttgttaacgagtgtccccggggtactctttaagcataccaaacaaaagcaattattctttaaaaaagtataatatttcgagttccaatgcatt 39093149  T
Q  416 gattacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttc 490  Q
    ||||||| | |||||||||||||  | |||| ||||  ||||||| |||||||||| |||| |  ||||||||||    
T  39093150 gattacacgcatttttataaatatgtgctacttatatcccttaaagagtgtcccgatggcactgattaacatttc 39093224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 324 - 460
Target Start/End: Complemental strand, 2445258 - 2445121
Alignment:
Q  324 tcttgttaacgagtg-ctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    ||||||||||||||| || |||||||| ||||| |||  |||||||||| |||||| |||  |||||||||| ||||| |||| ||| ||| |  |||||    
T  2445258 tcttgttaacgagtgtcttcggacactttttaatcattttaaaataagcaattattttttttaaaagttaaatatttcgattttcaaggcaatcgttaca 2445159  T
Q  423 tgtatttttataaatactttctacatatagtccttaaa 460  Q
    ||||||||||||||||||| |||| |||| ||||||||    
T  2445158 tgtatttttataaatacttactacttataatccttaaa 2445121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 320 - 470
Target Start/End: Original strand, 11077886 - 11078038
Alignment:
Q  320 agggtcttgttaacgagtgctccgga--cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    |||||||||||||| ||||| || ||  ||||||||| |||||| |||| |||| |||||||||||||||| | |||| |||| |||||| || |||| |    
T  11077886 agggtcttgttaacaagtgccccagatgcactctttatgcataccaaaacaagcaattattctttaaaaaattcaaacttttcgatttcctatacattaa 11077985  T
Q  418 ttacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccg 470  Q
    ||| || |||||||| ||||| || |||| ||||||||||||  |||||||||    
T  11077986 ttatatatatttttaaaaatagttgctacttatagtccttaacgagtgtcccg 11078038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 11993796 - 11993873
Alignment:
Q  313 aaaagaaagggtcttgttaacgagtgctccggacactctttaagcatactaaaataagcgattattctttaaaaaagt 390  Q
    |||| ||||||||||||||| |||||| ||||||||||||||||||||| |||| |||| ||||||||||||||||||    
T  11993796 aaaaaaaagggtcttgttaatgagtgccccggacactctttaagcatacaaaaacaagcaattattctttaaaaaagt 11993873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 318 - 441
Target Start/End: Original strand, 22209371 - 22209496
Alignment:
Q  318 aaagggtcttgttaacgagtg-ctccgg-acactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    |||||||||| ||||| |||| |||||| |||||||||||||||  ||||| |||| ||||||| |||||||||||||| ||||  ||||||||  ||||    
T  22209371 aaagggtcttattaacaagtgtctccgggacactctttaagcattttaaaagaagcaattattccttaaaaaagttaaatattttgatttccaagacatt 22209470  T
Q  416 gattacatgtatttttataaatactt 441  Q
    |||||||| |||||| ||||||||||    
T  22209471 gattacatatattttcataaatactt 22209496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 319 - 446
Target Start/End: Original strand, 32646787 - 32646913
Alignment:
Q  319 aagggtcttgttaacgagtgctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgat 418  Q
    ||||||||||||||||| ||||||||||| | ||||| |||  |||||||| | |||||||||| ||||||| ||| |||| |||||  |||||||||||    
T  32646787 aagggtcttgttaacgaatgctccggacattttttaaacattttaaaataaacaattattcttttaaaaagtcaaatattttaatttttaatgcattgat 32646886  T
Q  419 tacatgtatttttataaatactttctac 446  Q
    ||||| || ||| |||||||||| ||||    
T  32646887 tacatata-tttcataaatacttactac 32646913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 319 - 438
Target Start/End: Complemental strand, 20279695 - 20279574
Alignment:
Q  319 aagggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattg 416  Q
    ||||||||||||||| ||||| ||  || |||||||||||||| ||||||||||| |||||||||| ||||||| ||| |||||||||| |||| ||||     
T  20279695 aagggtcttgttaacaagtgcccccggggcactctttaagcattctaaaataagcaattattctttcaaaaagtcaaatatttcaattttcaatacatta 20279596  T
Q  417 attacatgtatttttataaata 438  Q
    | |||| | |||||| ||||||    
T  20279595 aatacacgcatttttttaaata 20279574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 319 - 438
Target Start/End: Complemental strand, 21066322 - 21066201
Alignment:
Q  319 aagggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattg 416  Q
    ||||||||||||||| ||||| ||  || |||||||||||||| ||||||||||| |||||||||| ||||||| ||| |||||||||| |||| ||||     
T  21066322 aagggtcttgttaacaagtgcccccggggcactctttaagcattctaaaataagcaattattctttcaaaaagtcaaatatttcaattttcaatacatta 21066223  T
Q  417 attacatgtatttttataaata 438  Q
    | |||| | |||||| ||||||    
T  21066222 aatacacgcatttttttaaata 21066201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 402 - 497
Target Start/End: Original strand, 11995161 - 11995256
Alignment:
Q  402 atttccaatgcattgattacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttcccaaaaa 497  Q
    ||||||||||||||||||||  |||||||||||||||||| |||  ||||| ||||||| |||| ||||  |||| ||||||||||||||| ||||    
T  11995161 atttccaatgcattgattactcgtatttttataaatacttgctatttataggccttaaagagtgccccgggggcactcgttaacatttccctaaaa 11995256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 323 - 436
Target Start/End: Original strand, 12002237 - 12002352
Alignment:
Q  323 gtcttgttaacgagtg--ctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    |||||||||||||||   ||| || ||||||||||| |||||||| ||||  ||||||||||||||| || |||  ||||||||||||||||| ||||||    
T  12002237 gtcttgttaacgagtatcctcggggcactctttaagtatactaaattaagtaattattctttaaaaatgtaaaagttttcaatttccaatgcactgatta 12002336  T
Q  421 catgtatttttataaa 436  Q
    ||   |||||||||||    
T  12002337 cacaaatttttataaa 12002352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 323 - 422
Target Start/End: Original strand, 42801049 - 42801149
Alignment:
Q  323 gtcttgttaacgagtgctccg-gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattac 421  Q
    ||||||||||||||||| ||| |||||| |||||| || ||||||||||  ||||||||||| |||||  ||| |||||||||| ||||||||| |||||    
T  42801049 gtcttgttaacgagtgccccgtgacactttttaagtattctaaaataagtaattattctttacaaaaggcaaatatttcaattttcaatgcattaattac 42801148  T
Q  422 a 422  Q
    |    
T  42801149 a 42801149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 319 - 422
Target Start/End: Complemental strand, 1876622 - 1876517
Alignment:
Q  319 aagggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattg 416  Q
    |||| |||||||||||||||| ||  || |||||||||||||| ||||| ||||  |||||||||| |||| || |||  ||||||||||||||||| ||    
T  1876622 aaggttcttgttaacgagtgcccccggggcactctttaagcatgctaaattaagtaattattcttttaaaatgtcaaaattttcaatttccaatgcactg 1876523  T
Q  417 attaca 422  Q
    ||||||    
T  1876522 attaca 1876517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 326 - 492
Target Start/End: Complemental strand, 5293877 - 5293708
Alignment:
Q  326 ttgttaacgagtgc-tccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacat 423  Q
    |||||||||||||| |||||| || |||||||||||  |||||||||  ||| ||||||| |||||||||| ||||  ||||  |||||| | |||||||    
T  5293877 ttgttaacgagtgcctccggagcagtctttaagcattttaaaataagtaattgttctttataaaagttaaatattttgatttttaatgcaataattacat 5293778  T
Q  424 gtatttttataaatactttctacatatagtccttaaaaagtgtc-ccgaaggcaatcgttaacatttccc 492  Q
    | ||||| ||||||||||  | | ||| ||||||||| |||||| | | | ||| |||||||||||||||    
T  5293777 gcattttcataaatacttcttgcttatggtccttaaagagtgtctcaggaagcactcgttaacatttccc 5293708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 326 - 490
Target Start/End: Complemental strand, 8108381 - 8108213
Alignment:
Q  326 ttgttaacgagtgc--tccggacactctttaagcatactaaaataagcga-ttattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    ||||||||||||||  || || |||||||||||||| ||||||||| | | |||||| |||||||||||||| ||||  ||||   ||  ||||||||||    
T  8108381 ttgttaacgagtgcattcggggcactctttaagcattctaaaataaacaagttattcattaaaaaagttaaatattttgattttggatatattgattaca 8108282  T
Q  423 tgtatttttataaatactttctacatatagtcctt-aaaaagtgtcccgaaggcaatcgttaacatttc 490  Q
       ||||| ||||||||||||||| |||| ||||| ||||||||  |||||| || || ||||||||||    
T  8108281 cacattttcataaatactttctacttataatccttaaaaaagtgctccgaagacactccttaacatttc 8108213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 342 - 458
Target Start/End: Complemental strand, 43631583 - 43631468
Alignment:
Q  342 cggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    |||||||||||||| ||| ||||||||| | ||||||  | |||||| | ||| |||| |||||| |||||||||||||||  ||||||||||||||| |    
T  43631583 cggacactctttaaacattctaaaataa-caattatttataaaaaaaatcaaatattttaatttctaatgcattgattacacatatttttataaatacat 43631485  T
Q  442 tctacatatagtcctta 458  Q
     |||| ||| |||||||    
T  43631484 actacttatggtcctta 43631468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 324 - 422
Target Start/End: Complemental strand, 7528360 - 7528262
Alignment:
Q  324 tcttgttaacgagtgctccg-gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    ||||||||||||||| |||| |||||| |||||||||  |||||||||  |||||||||||  ||||| ||| ||||| ||||||||| |||||||||||    
T  7528360 tcttgttaacgagtg-tccgtgacactttttaagcattttaaaataagtaattattctttacgaaagtcaaatatttcgatttccaatacattgattaca 7528262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 323 - 415
Target Start/End: Original strand, 9460428 - 9460522
Alignment:
Q  323 gtcttgttaacgagtgctccg--gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    ||||||||||||||||| |||  | ||||| |||||||||| |||| |||| ||||||||||| |||||| ||||||||| |||| |||| ||||    
T  9460428 gtcttgttaacgagtgccccgagggcactcgttaagcataccaaaacaagcaattattctttagaaaagtcaaacatttcgattttcaatacatt 9460522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 323 - 411
Target Start/End: Complemental strand, 37564468 - 37564378
Alignment:
Q  323 gtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatg 411  Q
    |||||||||||||||||  |  ||||||||||||| ||| ||||| ||||  |||||||||||||||||| ||| | ||||||||||||||    
T  37564468 gtcttgttaacgagtgcctctgggacactctttaaacatgctaaattaagaaattattctttaaaaaagtcaaatagttcaatttccaatg 37564378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 344 - 460
Target Start/End: Complemental strand, 24103164 - 24103049
Alignment:
Q  344 gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtattttt-ataaatacttt 442  Q
    |||||||||||||||| ||||||||||  |||||| ||| |||| || |||  |||| |||||| ||||| |||||||  |||||||| | ||||||||     
T  24103164 gacactctttaagcattctaaaataagaaattatttttttaaaaggtcaaatgtttcgatttccgatgcaatgattac--gtatttttcacaaatactta 24103067  T
Q  443 ctacatatagtccttaaa 460  Q
    |||| |||||||||||||    
T  24103066 ctacttatagtccttaaa 24103049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 320 - 411
Target Start/End: Original strand, 31264964 - 31265057
Alignment:
Q  320 agggtcttgttaacgagtgctccgga--cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatg 411  Q
    |||||||||||||||||||| || |   |||||||||||||| ||||| || |   ||||||||||||||||| ||||| ||||||||||||||    
T  31264964 agggtcttgttaacgagtgcccctgtggcactctttaagcatgctaaattaggaagttattctttaaaaaagtcaaacaattcaatttccaatg 31265057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 423
Target Start/End: Complemental strand, 42760282 - 42760181
Alignment:
Q  323 gtcttgttaacgagtgctcc-ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattac 421  Q
    ||||||||||||||| | || ||||||||||||||||| | ||||  ||  |||||||  ||||||| | |||  |||||||||||||||||||||||||    
T  42760282 gtcttgttaacgagttcccctggacactctttaagcattccaaaaggagaaattattccataaaaaaatcaaatgtttcaatttccaatgcattgattac 42760183  T
Q  422 at 423  Q
    ||    
T  42760182 at 42760181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 1576464 - 1576380
Alignment:
Q  355 agcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatac 439  Q
    ||||| ||||||||| | |||||||| |||||||  |||| ||||| |||| ||||||||||| |||| ||||||| ||||||||    
T  1576464 agcattctaaaataaacaattattctgtaaaaaaaataaatatttcgattttcaatgcattgaatacacgtattttcataaatac 1576380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 346 - 460
Target Start/End: Original strand, 27055905 - 27056019
Alignment:
Q  346 cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttcta 445  Q
    ||||||||||||||  |||||||||  ||||||    || |||||||||  |||| |||||||||| ||||||||||  | |||| ||||||| || |||    
T  27055905 cactctttaagcattttaaaataagaaattatttcaaaagaaagttaaatgtttcgatttccaatgtattgattacacattttttcataaataattacta 27056004  T
Q  446 catatagtccttaaa 460  Q
    | |||||||||||||    
T  27056005 cttatagtccttaaa 27056019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 34336557 - 34336511
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||    
T  34336557 attattctttaaaaaagtcaaaaacttcaatttccaatgcattgatt 34336511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 413
Target Start/End: Original strand, 11533198 - 11533294
Alignment:
Q  319 aagggtcttgttaacgagtgct--ccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgca 413  Q
    |||||||||||||||||||| |  | ||||||||||||| |||  |||| |||   ||||||||||||||| || |||  |||||||||||||||||    
T  11533198 aagggtcttgttaacgagtgttttcgggacactctttaaacatgttaaattaataaattattctttaaaaatgtcaaagttttcaatttccaatgca 11533294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 361 - 430
Target Start/End: Complemental strand, 39333595 - 39333527
Alignment:
Q  361 ctaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttt 430  Q
    ||||||||||| ||||||||| |||||||| ||||||||| |||| |||  ||||||||||||| |||||    
T  39333595 ctaaaataagcaattattcttcaaaaaagtcaaacatttcgattt-caagacattgattacatgcatttt 39333527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 422
Target Start/End: Complemental strand, 27801364 - 27801261
Alignment:
Q  321 gggtcttgttaacgagtgctccg--gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgat 418  Q
    ||||||||||||||||||| ||   |||||||||||| ||| ||||| | ||  |||||||||| ||||||| ||  ||| |||||| ||||||||| ||    
T  27801364 gggtcttgttaacgagtgcccccatgacactctttaatcattctaaatttagtaattattcttttaaaaagtcaactattacaattttcaatgcattcat 27801265  T
Q  419 taca 422  Q
    ||||    
T  27801264 taca 27801261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 318 - 415
Target Start/End: Original strand, 28207589 - 28207688
Alignment:
Q  318 aaagggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    |||||||||||||||||||||| ||   |||||||||||||||| | ||| | | | || ||||||| ||||||| ||  ||| ||||||||||||||||    
T  28207589 aaagggtcttgttaacgagtgcccccgagacactctttaagcatcccaaatttaacaataattcttttaaaaagtcaactattacaatttccaatgcatt 28207688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 413
Target Start/End: Complemental strand, 31844354 - 31844262
Alignment:
Q  322 ggtcttgttaacgagtgctcc-ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgca 413  Q
    |||||||||||||||||| || || ||||||||||  || ||||| ||||  ||||||| |||||||||| |||  ||| |||||||||||||    
T  31844354 ggtcttgttaacgagtgccccagggcactctttaaatattctaaattaagtaattattccttaaaaaagtcaaagttttgaatttccaatgca 31844262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 422
Target Start/End: Complemental strand, 39691252 - 39691149
Alignment:
Q  321 gggtcttgttaacgagtgc--tccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgat 418  Q
    |||| ||||||||||||||  ||  |||||||||||||||| | | | |||   |||||||||||||||||| ||| | |||||||| |||||||||||     
T  39691252 gggttttgttaacgagtgccctcgagacactctttaagcattccacattaaaaaattattctttaaaaaagtcaaatagttcaattttcaatgcattgaa 39691153  T
Q  419 taca 422  Q
    ||||    
T  39691152 taca 39691149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 373 - 461
Target Start/End: Original strand, 40949380 - 40949468
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctacatatagtccttaaaa 461  Q
    ||||||||| | ||||||  || ||||| |||||||||  ||| |||||||| |||||||||||||||| |||| ||  ||||||||||    
T  40949380 attattcttcataaaagtctaatatttcgatttccaatatattaattacatgcatttttataaatacttactacttaaggtccttaaaa 40949468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 327 - 435
Target Start/End: Original strand, 36924009 - 36924119
Alignment:
Q  327 tgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatg 424  Q
    ||||||||||||||||  ||  |||||||||||   | |||| |||  |||||||||||||||||| ||| ||||| ||||||||  |||| ||||||||    
T  36924009 tgttaacgagtgctcccggggtactctttaagctatcaaaaacaagaaattattctttaaaaaagtcaaatatttcgatttccaaaacattaattacatg 36924108  T
Q  425 tatttttataa 435  Q
     ||||| ||||    
T  36924109 cattttcataa 36924119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 324 - 422
Target Start/End: Original strand, 37166993 - 37167091
Alignment:
Q  324 tcttgttaacgagtgct-ccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    ||||||||||||||| | ||| ||||||||||| |||   ||||||| | ||||||||| |||||| ||||| | ||| |||||||||||||||| ||||    
T  37166993 tcttgttaacgagtgtttccgaacactctttaaacatttcaaaataaacaattattcttcaaaaaa-ttaaatagttcgatttccaatgcattgaataca 37167091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 420
Target Start/End: Complemental strand, 2124203 - 2124103
Alignment:
Q  324 tcttgttaacgagtgctccggacac--tctttaagcatactaaaataagcgattattctttaaaaaa--gttaaacatttcaatttccaatgcattgatt 419  Q
    ||||||||||||||| ||| || ||  ||||||| ||| |||||| |||  |||||||| |||||||  |||||  ||||||||||| ||||||||||||    
T  2124203 tcttgttaacgagtgttcccgagacattctttaaacattctaaaagaagaaattattctataaaaaaaagttaagtatttcaatttcgaatgcattgatt 2124104  T
Q  420 a 420  Q
    |    
T  2124103 a 2124103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 321 - 421
Target Start/End: Original strand, 30534986 - 30535088
Alignment:
Q  321 gggtcttgttaacgagtg-ctccggac-actctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgat 418  Q
    |||||||||||||||||| ||| |||  ||||||||||||| ||||||  ||  |||||||  ||||||| | |||  ||||||||| ||||||||||||    
T  30534986 gggtcttgttaacgagtgtctctggagtactctttaagcattctaaaaggagaaattattccataaaaaaatcaaatgtttcaattttcaatgcattgat 30535085  T
Q  419 tac 421  Q
    |||    
T  30535086 tac 30535088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 4573074 - 4573115
Alignment:
Q  319 aagggtcttgttaacgagtgctccgga-cactctttaagcat 359  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  4573074 aagggtcttgttaacgagtgctccggagcagtctttaagcat 4573115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 417
Target Start/End: Complemental strand, 30675007 - 30674974
Alignment:
Q  384 aaaaagttaaacatttcaatttccaatgcattga 417  Q
    |||||||||||||||||||||| |||||||||||    
T  30675007 aaaaagttaaacatttcaatttacaatgcattga 30674974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 1370005 - 1369901
Alignment:
Q  313 aaaagaaagggtcttgttaacgagtg-ctccgg-acactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaat 410  Q
    ||||| ||||||||| |||||||||| |||||  ||| | ||||||||| ||||| | ||| |||||||||| ||||||| ||  ||  |||||||||||    
T  1370005 aaaagtaagggtcttattaacgagtgtctccgatacattatttaagcatcctaaatttagcaattattcttttaaaaagtcaactatcacaatttccaat 1369906  T
Q  411 gcatt 415  Q
    |||||    
T  1369905 gcatt 1369901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 318 - 422
Target Start/End: Complemental strand, 7044470 - 7044366
Alignment:
Q  318 aaagggtcttgttaacgagtgctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||| |||||||||||||| | || ||||||||||| || |||||| |||  |||| | | | ||||||| ||||||||| ||||  || || ||||    
T  7044470 aaagggttttgttaacgagtgccctgggcactctttaaggattctaaaagaagaaattaatttattaaaaagtcaaacatttcgatttttaaggctttga 7044371  T
Q  418 ttaca 422  Q
    |||||    
T  7044370 ttaca 7044366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 321 - 415
Target Start/End: Original strand, 7691327 - 7691423
Alignment:
Q  321 gggtcttgttaacgagtg-ctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    |||| ||||||||||||| ||| ||| ||||||||||||||  ||||| |||  |||||||  || |||| ||||| |||||||||||| |||||||    
T  7691327 gggttttgttaacgagtgtctcgggagcactctttaagcattttaaaagaagaaattattccatacaaaaattaaatatttcaatttccgatgcatt 7691423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 373 - 413
Target Start/End: Complemental strand, 8785367 - 8785327
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgca 413  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  8785367 attattctttaaaaaaagtaaaaatttcaatttccaatgca 8785327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 345 - 405
Target Start/End: Original strand, 27776541 - 27776601
Alignment:
Q  345 acactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaattt 405  Q
    ||||||||||| |||  |||||||| |||||||| ||||||||| ||||| |||| |||||    
T  27776541 acactctttaaacattttaaaataaacgattattatttaaaaaaattaaatattttaattt 27776601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 373 - 436
Target Start/End: Complemental strand, 29487144 - 29487080
Alignment:
Q  373 attattctttaaaaaagtt-aaacatttcaatttccaatgcattgattacatgtatttttataaa 436  Q
    ||||||||||||||||||| ||| | |||||||| ||||||||| | ||||  ||||||||||||    
T  29487144 attattctttaaaaaagtttaaatagttcaattttcaatgcatttaatacacatatttttataaa 29487080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 319 - 386
Target Start/End: Complemental strand, 38019554 - 38019489
Alignment:
Q  319 aagggtcttgttaacgagtgctccggacactctttaagcatactaaaataagcgattattctttaaaa 386  Q
    |||||||||||||||||||||   ||||  ||||||||||| ||||| ||||  ||||||||||||||    
T  38019554 aagggtcttgttaacgagtgccagggac--tctttaagcatgctaaattaagaaattattctttaaaa 38019489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 6e-42; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 320 - 492
Target Start/End: Complemental strand, 39400416 - 39400242
Alignment:
Q  320 agggtcttgttaacgagtgctccgg--acactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||| |||||||||||||| || |  |||||||||||| ||||||||||||   ||||||||||||| ||||||||||||| ||||| ||||||||| |    
T  39400416 agggttttgttaacgagtgcccccgtgacactctttaagtatactaaaataattaattattctttaaacaagttaaacattttaattttcaatgcattaa 39400317  T
Q  418 ttacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttccc 492  Q
    ||||||||||||||||||||||||| |||||||||| |||||| ||||  ||| | ||| |||||||||||||||    
T  39400316 ttacatgtatttttataaatactttttacatatagttcttaaagagtgctccggaagcactcgttaacatttccc 39400242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 321 - 460
Target Start/End: Original strand, 37708405 - 37708546
Alignment:
Q  321 gggtcttgttaacgagtgctccgga--cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgat 418  Q
    ||||||||||||| ||||| || ||  ||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||| ||||||| ||||    
T  37708405 gggtcttgttaacaagtgcccccgaggcactctttaagcatattaaaataagcaattagtctttaaaaaagttaaacatttcaattttcaatgcactgat 37708504  T
Q  419 tacatgtatttttataaatactttctacatatagtccttaaa 460  Q
    ||||||||||||||||||||  || |||||||||| ||||||    
T  37708505 tacatgtatttttataaatatgttttacatatagttcttaaa 37708546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 322 - 489
Target Start/End: Complemental strand, 38457352 - 38457184
Alignment:
Q  322 ggtcttgttaacgagtgctcc-ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||| ||||||| |||||||||||||||| ||||| ||||  |||| ||||||||||||||    
T  38457352 ggtcttgttaacgagtgctccaggacattctttaagcattctataataagcaattattctttaaaaaa-ttaaatattttgattttcaatgcattgatta 38457254  T
Q  421 catgtatttttataaatactttctacatatagtccttaaaa-agtgtcccgaaggcaatcgttaacattt 489  Q
    ||||||||||  ||||||||| |||  ||| || ||||||| ||| ||||  | ||| ||||||||||||    
T  38457253 catgtattttcgtaaatacttactatttatggttcttaaaagagtatcccagaagcactcgttaacattt 38457184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 368 - 492
Target Start/End: Original strand, 52309185 - 52309309
Alignment:
Q  368 aagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctacatatagtccttaaaaagtgtc 467  Q
    |||| ||||||||||||||| || ||| ||||| ||||||||||||||||||||| |||||||||||||||||| |||| ||||| ||||||| |||| |    
T  52309185 aagcaattattctttaaaaaggtaaaatatttcgatttccaatgcattgattacacgtatttttataaatacttgctacttatagcccttaaagagtgcc 52309284  T
Q  468 ccgaaggcaatcgttaacatttccc 492  Q
    |||  | || |||||||||||||||    
T  52309285 ccggggacactcgttaacatttccc 52309309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 362 - 466
Target Start/End: Complemental strand, 46712009 - 46711905
Alignment:
Q  362 taaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctacatatagtccttaaaa 461  Q
    |||||||||  |||||||||||||||||| ||||||||  ||||||||||||||||||||||| ||||||||||||||||  ||  ||| ||||||||||    
T  46712009 taaaataagtaattattctttaaaaaagtcaaacattttgatttccaatgcattgattacatgcatttttataaatacttgttatttatggtccttaaaa 46711910  T
Q  462 agtgt 466  Q
    |||||    
T  46711909 agtgt 46711905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 346 - 491
Target Start/End: Original strand, 30082852 - 30082999
Alignment:
Q  346 cactctttaagcatactaaaataagcgattattctttaaaaaa--gttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttc 443  Q
    |||||||||||||| |||||||||||  |||||||||||||||  || ||| ||||||||| | || | | |||||||||| ||||||| |||||||| |    
T  30082852 cactctttaagcattctaaaataagcagttattctttaaaaaaaagtcaaatatttcaattcctaaagaaatgattacatggatttttaaaaatacttac 30082951  T
Q  444 tacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttcc 491  Q
    ||  |||||  |||||| |||||||||||| || ||||||||||||||    
T  30082952 tatttataggtcttaaagagtgtcccgaagacactcgttaacatttcc 30082999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 319 - 489
Target Start/End: Complemental strand, 48322345 - 48322175
Alignment:
Q  319 aagggtcttgttaacgagtgctccggac-actctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    |||||||||||||||||||  || ||   ||||||||||||| ||||||||||  |||||| ||| ||||||| |||  |||| ||||||||| ||||||    
T  48322345 aagggtcttgttaacgagtattcaggggtactctttaagcattctaaaataagtaattatttttttaaaaagtcaaatgtttcgatttccaatacattga 48322246  T
Q  418 ttacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacattt 489  Q
    |||||||| |||| |||||||| | |||| ||| ||||||||| |||| |||| | ||| ||||||||||||    
T  48322245 ttacatgttttttcataaatacctactacttatggtccttaaagagtgccccgga-gcactcgttaacattt 48322175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 318 - 422
Target Start/End: Complemental strand, 30464096 - 30463992
Alignment:
Q  318 aaagggtcttgttaacgagtgctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||||||||||||||||| || || ||||| |||||||| | |||| |||  |||||||| ||||||||| ||||||||||||||  ||||||||||    
T  30464096 aaagggtcttgttaacgagtgttcggggcactcgttaagcattccaaaagaagaaattattctataaaaaagtcaaacatttcaatttttaatgcattga 30463997  T
Q  418 ttaca 422  Q
    |||||    
T  30463996 ttaca 30463992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 322 - 441
Target Start/End: Original strand, 25461440 - 25461561
Alignment:
Q  322 ggtcttgttaacgagtgc-tccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaac-atttcaatttccaatgcattgatt 419  Q
    |||||||||||||||||| || || |||||||||| |||   ||||||||| |||||||||||||||||| |||  |||||||||||||| ||| |||||    
T  25461440 ggtcttgttaacgagtgcctcggggcactctttaaacattgcaaaataagccattattctttaaaaaagtcaaaatatttcaatttccaaggcaatgatt 25461539  T
Q  420 acatgtatttttataaatactt 441  Q
    ||||| ||||||  ||||||||    
T  25461540 acatgcattttttaaaatactt 25461561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 319 - 422
Target Start/End: Original strand, 45757895 - 45758000
Alignment:
Q  319 aagggtcttgttaacgagtg-ctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattg 416  Q
    |||||||||||||||||||| ||||||| ||||||||||||||  |||| ||||| ||||||||||||||| || |||  ||||||||| ||||||| ||    
T  45757895 aagggtcttgttaacgagtgtctccggatcactctttaagcatgttaaattaagcaattattctttaaaaatgtcaaagttttcaatttacaatgcactg 45757994  T
Q  417 attaca 422  Q
    ||||||    
T  45757995 attaca 45758000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 320 - 413
Target Start/End: Original strand, 29611987 - 29612082
Alignment:
Q  320 agggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgca 413  Q
    |||||||||||||||||||| ||  ||||||||||||| ||| ||||||||||  ||||||||||||||| || | |  |||||||||||||||||    
T  29611987 agggtcttgttaacgagtgcccccgggacactctttaaacattctaaaataagtaattattctttaaaaatgtgacagttttcaatttccaatgca 29612082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 373 - 492
Target Start/End: Original strand, 40546349 - 40546467
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtattttt-ataaatactttctacatatagtccttaaaaagtgtcccga 471  Q
    |||||| ||||||||||| ||| ||||| ||||||||||||||||||||||| |||||| |||||||||| |||| ||| || |||||||| |||| | |    
T  40546349 attattttttaaaaaagtcaaatatttcgatttccaatgcattgattacatgcatttttcataaatacttactacttatggt-cttaaaaaatgtctc-a 40546446  T
Q  472 aggcaatcgttaacatttccc 492  Q
     | || |||||||||||||||    
T  40546447 ggacactcgttaacatttccc 40546467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 312 - 501
Target Start/End: Complemental strand, 45529266 - 45529075
Alignment:
Q  312 aaaaagaaagggtcttgttaacgagtgc--tccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaa 409  Q
    ||||||||||||| || |||||||||||  || || |||||||||||||| | ||| | ||  | ||||||| |||||||| |||| || ||| || ||     
T  45529266 aaaaagaaagggtattcttaacgagtgccctcggggcactctttaagcatcccaaatttagaaaatattcttcaaaaaagtcaaacgttacaagtttcag 45529167  T
Q  410 tgcattgattacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttcccaaaaagaaa 501  Q
    ||||||||||||||  ||||| ||||| |||| |||   |  || |||||| ||| |||||  |||| ||||||||||||||||||||||||    
T  45529166 tgcattgattacataaattttcataaaaacttactattaagggtgcttaaagagtatcccgggggcactcgttaacatttcccaaaaagaaa 45529075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 319 - 488
Target Start/End: Complemental strand, 46188718 - 46188549
Alignment:
Q  319 aagggtcttgttaacgagtg-ctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    |||||| ||||||||||||  | ||||||| | ||||||||| | ||||||||  |||||| ||||| ||||| ||| ||| | |||| | |||||||||    
T  46188718 aagggttttgttaacgagtatccccggacagtttttaagcattccaaaataagtaattattgtttaagaaagtcaaatatt-cgattttcgatgcattga 46188620  T
Q  418 ttacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatt 488  Q
     |||||| ||||| |||||||||| |||| ||| |||||||| || |||| || | ||| |||||||||||    
T  46188619 ctacatgcattttcataaatacttactacttatggtccttaataaatgtctcggaagcactcgttaacatt 46188549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 344 - 461
Target Start/End: Original strand, 40392386 - 40392502
Alignment:
Q  344 gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttc 443  Q
    ||||||||||||| ||  ||||| |||  |||| ||||||||||||||||| ||||  ||||| |||||||||||||||| |||||| ||||||| || |    
T  40392386 gacactctttaagtattttaaaa-aagtaattactctttaaaaaagttaaatatttttatttctaatgcattgattacatatattttcataaatatttac 40392484  T
Q  444 tacatatagtccttaaaa 461  Q
    ||| |||  |||||||||    
T  40392485 tacttatgttccttaaaa 40392502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 346 - 427
Target Start/End: Complemental strand, 50217082 - 50217002
Alignment:
Q  346 cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtat 427  Q
    |||||||||| |||||||||| |||| ||||||||||||| |||| || |||||| |||| ||||| |||||||||||||||    
T  50217082 cactctttaaacatactaaaacaagcaattattctttaaagaagtcaatcatttcgattttcaatg-attgattacatgtat 50217002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 388
Target Start/End: Original strand, 23642718 - 23642786
Alignment:
Q  322 ggtcttgttaacgagtg-ctcc-ggacactctttaagcatactaaaataagcgattattctttaaaaaa 388  Q
    |||||||||||| |||| |||| ||||||||||||||||||| ||||||||| ||||||||| ||||||    
T  23642718 ggtcttgttaactagtgtctcctggacactctttaagcataccaaaataagcaattattcttaaaaaaa 23642786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 318 - 423
Target Start/End: Complemental strand, 779815 - 779709
Alignment:
Q  318 aaagggtcttgttaacgagtg-ctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattg 416  Q
    ||||||||||||||||||||| |||| ||||||||||||  || |||||| ||   |||||| | | ||||||||||| ||||  |||| |||||||||     
T  779815 aaagggtcttgttaacgagtgcctccagacactctttaaaaattctaaaagaataaattattttatgaaaaagttaaatattttgatttgcaatgcattc 779716  T
Q  417 attacat 423  Q
    |||||||    
T  779715 attacat 779709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 346 - 432
Target Start/End: Complemental strand, 8703425 - 8703339
Alignment:
Q  346 cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtattttta 432  Q
    ||||| |||||||| ||||||||||| ||| || ||||||||||||||| ||||  ||||| || ||| | |||||||| |||||||    
T  8703425 cactcgttaagcattctaaaataagcaattgttatttaaaaaagttaaatattttgatttctaaggcaatcattacatgcattttta 8703339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 346 - 432
Target Start/End: Complemental strand, 9055312 - 9055226
Alignment:
Q  346 cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtattttta 432  Q
    ||||| |||||||| ||||||||||| ||| || ||||||||||||||| ||||  ||||| || ||| | |||||||| |||||||    
T  9055312 cactcgttaagcattctaaaataagcaattgttatttaaaaaagttaaatattttgatttctaaggcaatcattacatgcattttta 9055226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 324 - 415
Target Start/End: Original strand, 24313522 - 24313615
Alignment:
Q  324 tcttgttaacgagtg--ctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    |||||||||||||||  ||| || |||||||||| ||| ||||| ||| | ||||||||||||||| || |||  ||||||||| |||||||||    
T  24313522 tcttgttaacgagtgtcctcggggcactctttaaacattctaaattaaacaattattctttaaaaatgtcaaagttttcaattttcaatgcatt 24313615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 318 - 422
Target Start/End: Original strand, 25317770 - 25317876
Alignment:
Q  318 aaagggtcttgttaacgagtgc-tccgg-acactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    ||||||||||||||||||| || ||||| |||||||| |||||| |||||  |||  |||||||||| ||||  | |||  ||||||||||||||||||     
T  25317770 aaagggtcttgttaacgagcgcctccgggacactcttcaagcatgctaaataaagtaattattcttttaaaatttaaaagttttcaatttccaatgcatc 25317869  T
Q  416 gattaca 422  Q
    |||||||    
T  25317870 gattaca 25317876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 318 - 393
Target Start/End: Complemental strand, 46093692 - 46093615
Alignment:
Q  318 aaagggtcttgttaacgagtgct--ccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaa 393  Q
    |||||||||||||||||||||||  | | |||||||||||  ||| |||| | ||| |||||||||||||||||||||    
T  46093692 aaagggtcttgttaacgagtgctttcggaacactctttaatgatattaaatttagcaattattctttaaaaaagttaa 46093615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 436
Target Start/End: Complemental strand, 25548272 - 25548219
Alignment:
Q  383 aaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaa 436  Q
    |||||||||||| ||||||||||| |||||||||||||||  |||||| |||||    
T  25548272 aaaaaagttaaatatttcaatttctaatgcattgattacacatattttcataaa 25548219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 422
Target Start/End: Original strand, 48551006 - 48551111
Alignment:
Q  319 aagggtcttgttaacgagtg-ctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattg 416  Q
    |||||| ||||||||||||| | || || |||||||||||||| ||||| ||||  ||||||||||||||| || |||  ||||||||| |||||||  |    
T  48551006 aagggtgttgttaacgagtgtccccagagcactctttaagcatgctaaattaagaaattattctttaaaaatgtcaaagttttcaattttcaatgcaccg 48551105  T
Q  417 attaca 422  Q
    ||||||    
T  48551106 attaca 48551111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 362 - 446
Target Start/End: Complemental strand, 50368501 - 50368419
Alignment:
Q  362 taaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctac 446  Q
    |||||||||  |||||||||||||||||| ||| ||||  ||||| | ||||||||||  || ||||||||||||||||| ||||    
T  50368501 taaaataagtaattattctttaaaaaagtcaaatattttgatttctattgcattgatt--atatatttttataaatacttactac 50368419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 422
Target Start/End: Original strand, 53040435 - 53040540
Alignment:
Q  319 aagggtcttgttaacgagtgctc-cg-gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattg 416  Q
    |||||||||| |||||||| ||| || ||||||||||||| || ||||| ||||  |||||| ||||||||| | ||| | |||||||||||||| ||||    
T  53040435 aagggtcttgctaacgagtactctcgtgacactctttaaggattctaaattaagaaattattatttaaaaaattcaaatacttcaatttccaatgtattg 53040534  T
Q  417 attaca 422  Q
    | ||||    
T  53040535 aataca 53040540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 413
Target Start/End: Complemental strand, 3027125 - 3027029
Alignment:
Q  319 aagggtcttgttaacgagtg-ctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgca 413  Q
    |||||||||||||||||||| ||||||| |||||||||||||| ||||| ||||  ||| || ||||||||  | |||  ||||| |||||||||||    
T  3027125 aagggtcttgttaacgagtgcctccggagcactctttaagcattctaaattaagtaatttttatttaaaaatatcaaaggtttcattttccaatgca 3027029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 346 - 497
Target Start/End: Original strand, 39976721 - 39976872
Alignment:
Q  346 cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgta-tttttataaatactttct 444  Q
    |||||||| | ||| ||||||||| | |||||| ||||||||||| |||  |||| |||| |||| ||||||||||| ||| ||||||||||||| | ||    
T  39976721 cactctttgaacattctaaaataatcaattatt-tttaaaaaagtcaaatgtttctattttcaatacattgattacacgtattttttataaatacctgct 39976819  T
Q  445 acatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttcccaaaaa 497  Q
    || ||| ||  ||||| | | |||||||| ||  ||| ||||||||| |||||    
T  39976820 acttatggtatttaaagaatttcccgaagacacccgtgaacatttccaaaaaa 39976872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 323 - 421
Target Start/End: Complemental strand, 48180307 - 48180207
Alignment:
Q  323 gtcttgttaacgagtg-ctccgg-acactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    |||||||||||||||| |||||| ||||||||||||||| |  || | | | |||||||||| ||||||| ||  ||| ||||||||||||||||| |||    
T  48180307 gtcttgttaacgagtgtctccgggacactctttaagcatccccaatttaacaattattcttttaaaaagtcaactattacaatttccaatgcattggtta 48180208  T
Q  421 c 421  Q
    |    
T  48180207 c 48180207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 313 - 382
Target Start/End: Original strand, 52308976 - 52309047
Alignment:
Q  313 aaaagaaagggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattcttt 382  Q
    |||| |||| ||||||||||||||||| ||  || |||||||||||||||| |||| |||| ||||||||||    
T  52308976 aaaaaaaagagtcttgttaacgagtgcccccggggcactctttaagcataccaaaacaagcaattattcttt 52309047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 436
Target Start/End: Original strand, 11404728 - 11404791
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaa 436  Q
    |||||| | ||||||||||||| |||| |||||  |||| ||| ||||||||||||||||||||    
T  11404728 attattttataaaaaagttaaatattttaatttttaatgtattaattacatgtatttttataaa 11404791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 411
Target Start/End: Complemental strand, 54290917 - 54290823
Alignment:
Q  319 aagggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatg 411  Q
    |||||||||||||||||||   ||  || ||||||||||||||  |||| || |   ||||||||||||||||| ||||| ||||||||||||||    
T  54290917 aagggtcttgttaacgagtatccccggggcactctttaagcatgataaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatg 54290823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 346 - 423
Target Start/End: Original strand, 1511329 - 1511407
Alignment:
Q  346 cactctttaagcatactaaaataagcgattattctttaaaaaa-gttaaacatttcaatttccaatgcattgattacat 423  Q
    |||||||||||||| | |||| |||  |||||||  | ||||| || ||| ||||||||||||||||||||||||||||    
T  1511329 cactctttaagcatgccaaaagaagaaattattccatcaaaaatgtcaaagatttcaatttccaatgcattgattacat 1511407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 346 - 423
Target Start/End: Complemental strand, 41571679 - 41571601
Alignment:
Q  346 cactctttaagcatactaaaataagcgattatt-ctttaaaaaagttaaacatttcaatttccaatgcattgattacat 423  Q
    |||||||||||||| | |||| |||  |||||| | |||||||||  ||| ||||||||||| ||||||||||||||||    
T  41571679 cactctttaagcattccaaaagaagaaattatttcattaaaaaagccaaaaatttcaatttcgaatgcattgattacat 41571601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 321 - 410
Target Start/End: Complemental strand, 42846145 - 42846053
Alignment:
Q  321 gggtcttgttaacgagtgc-tccgga--cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaat 410  Q
    ||||||||||| ||||||| ||||||  |||||||||||||| ||||| | ||  |||||||||| ||||||| ||  |||||||||| ||||    
T  42846145 gggtcttgttagcgagtgcctccggatgcactctttaagcatcctaaatttagtaattattctttgaaaaagtcaactatttcaattttcaat 42846053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 374 - 411
Target Start/End: Original strand, 43803992 - 43804029
Alignment:
Q  374 ttattctttaaaaaagttaaacatttcaatttccaatg 411  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  43803992 ttattctttaaaaaagtcaaacaattcaatttccaatg 43804029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 402 - 499
Target Start/End: Complemental strand, 47115368 - 47115272
Alignment:
Q  402 atttccaatgcattgattacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttcccaaaaaga 499  Q
    |||| ||||||||||||||||||| |||| ||||||||||  ||  ||| ||||||||| ||||  || ||| || ||||||| ||||||| ||||||    
T  47115368 attttcaatgcattgattacatgttttttgataaatacttattatttatggtccttaaagagtggtcc-aagacactcgttaatatttccctaaaaga 47115272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 372 - 420
Target Start/End: Complemental strand, 25062035 - 25061987
Alignment:
Q  372 gattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    |||||||||||||||| ||||||  ||||||||| ||||||| ||||||    
T  25062035 gattattctttaaaaatgttaaaattttcaattttcaatgcactgatta 25061987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 320 - 356
Target Start/End: Original strand, 27968167 - 27968203
Alignment:
Q  320 agggtcttgttaacgagtgctccggacactctttaag 356  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  27968167 agggtcttgttaacgagtgccccggacactttttaag 27968203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 319 - 356
Target Start/End: Original strand, 28434477 - 28434516
Alignment:
Q  319 aagggtcttgttaacgagtgctcc--ggacactctttaag 356  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  28434477 aagggtcttgttaacgagtgctcccgggacactctttaag 28434516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 319 - 423
Target Start/End: Original strand, 29099141 - 29099248
Alignment:
Q  319 aagggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattatt-ctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    |||||||||||||||||||| |||  || |||| ||||||||| | |||| |||  || ||| | | |||||||| ||| |||||||||| |||| ||||    
T  29099141 aagggtcttgttaacgagtgttccaggggcactttttaagcattccaaaagaagaaatgattccataaaaaaagtcaaaaatttcaattttcaattcatt 29099240  T
Q  416 gattacat 423  Q
    ||||||||    
T  29099241 gattacat 29099248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 319 - 429
Target Start/End: Original strand, 34758895 - 34759007
Alignment:
Q  319 aagggtcttgttaacgagtg-ctcc-ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattg 416  Q
    |||||||||||||||||||| |||| || ||||||||||| || | |||| |||  |||||| | ||||||||| ||| ||||| | | |  ||||||||    
T  34758895 aagggtcttgttaacgagtgcctccggggcactctttaaggattcaaaaagaagtaattattttataaaaaagtgaaatatttcgactcctgatgcattg 34758994  T
Q  417 attacatgtattt 429  Q
    ||||||| |||||    
T  34758995 attacatatattt 34759007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 49682189 - 49682233
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||| ||||||||||| ||||||||||||||| | |||||||    
T  49682189 attattccttaaaaaagtttaacatttcaatttccgaagcattga 49682233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 6e-39; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 351 - 465
Target Start/End: Original strand, 42911060 - 42911174
Alignment:
Q  351 tttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctacatat 450  Q
    |||||| |||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||    
T  42911060 tttaagtatactaaaataagcaattattctttaaaaaagtcgaacatttcaattttcaatgcaccgattacatgtatttttataaatactttctacatat 42911159  T
Q  451 agtccttaaaaagtg 465  Q
    |||||||||| ||||    
T  42911160 agtccttaaagagtg 42911174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 375 - 469
Target Start/End: Complemental strand, 42890345 - 42890251
Alignment:
Q  375 tattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctacatatagtccttaaaaagtgtccc 469  Q
    |||| ||||||||||| ||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||| ||||||| ||||| ||||||||    
T  42890345 tattttttaaaaaagtcaaacatttcgatttccaatacattgattacatgtatttttaaaaatacttgctacttatagtcattaaagagtgtccc 42890251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 343 - 467
Target Start/End: Original strand, 1360528 - 1360652
Alignment:
Q  343 ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatacttt 442  Q
    ||||||||||||||||| | ||||| ||  |||||| |||||||||||||||  |||| |||||||||||||||||||||    ||||||||||||| |     
T  1360528 ggacactctttaagcattccaaaattagtaattattttttaaaaaagttaaatgtttcgatttccaatgcattgattacacacttttttataaatacata 1360627  T
Q  443 ctacatatagtccttaaaaagtgtc 467  Q
    |||| ||||||||||||| ||||||    
T  1360628 ctacttatagtccttaaagagtgtc 1360652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 344 - 490
Target Start/End: Complemental strand, 33887965 - 33887820
Alignment:
Q  344 gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttc 443  Q
    |||||||||||||||| | |||||||   |||||||||||||||||| ||| |||||||||| ||||||||||||||||| |||||| |||||||||| |    
T  33887965 gacactctttaagcattccaaaataaataattattctttaaaaaagtcaaatatttcaattttcaatgcattgattacat-tattttcataaatacttac 33887867  T
Q  444 tacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttc 490  Q
    | | |||  || ||||| ||||||  |||| || | |||||||||||    
T  33887866 ttcttatgatctttaaagagtgtcttgaagacacttgttaacatttc 33887820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 317 - 493
Target Start/End: Complemental strand, 10032063 - 10031885
Alignment:
Q  317 gaaagggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcat 414  Q
    ||||| |||| |||||||||||| ||  ||||||||||||||||| | ||||| ||  |||||| ||| |||||||||||  |||| |||||||||||||    
T  10032063 gaaagtgtctcgttaacgagtgcccccgggacactctttaagcattccaaaattagtaattatttttttaaaaagttaaatgtttcgatttccaatgcat 10031964  T
Q  415 tgattacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttccca 493  Q
    ||||||||    |||| |||||||| | |||  ||||||||||||| |||| ||| ||  || | ||||||||||||||    
T  10031963 tgattacacactttttcataaatacatactatttatagtccttaaagagtgcccctaaaacacttgttaacatttccca 10031885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 346 - 493
Target Start/End: Complemental strand, 23187307 - 23187162
Alignment:
Q  346 cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttcta 445  Q
    ||||||||||||||  |||||||||| |||| ||||||| ||| ||||| ||||||||||| ||  || | |||||||||||||||| ||||| || |||    
T  23187307 cactctttaagcattttaaaataagcaattactctttaataaaattaaatatttcaatttctaa-acaataattacatgtatttttaaaaatatttacta 23187209  T
Q  446 catatagtccttaaaaagtgtcccgaaggcaatcgttaacatttccca 493  Q
      ||| |  ||| ||||||||| |||||||| ||||||||||||||||    
T  23187208 tttatggatctt-aaaagtgtctcgaaggcactcgttaacatttccca 23187162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 490
Target Start/End: Complemental strand, 9097830 - 9097662
Alignment:
Q  323 gtcttgttaacgagtgc--tccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    |||||||||||||||||  || || ||||||||||||||||||| |||| | |||||| || |||||| | ||| |||||||||||||||||| | | ||    
T  9097830 gtcttgttaacgagtgccttcgggtcactctttaagcatactaatataaacaattatt-ttaaaaaaaatcaaatatttcaatttccaatgcaattaata 9097732  T
Q  421 catgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttc 490  Q
    ||   ||||| |||||||||| | || | ||||| ||||  |||| |||||||||| | |||||||||||    
T  9097731 cacacattttcataaatacttaccacttgtagtctttaactagtgccccgaaggcactagttaacatttc 9097662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 317 - 423
Target Start/End: Complemental strand, 7596288 - 7596180
Alignment:
Q  317 gaaagggtcttgttaacgagtg-ctccggacactctttaagcatactaaaataagcgattattctttaaaaa-agttaaacatttcaatttccaatgcat 414  Q
    |||| ||||||||||| ||||| |||||| ||||||||||||||  ||||| |||  ||||||   |||||| ||| ||| |||||||||||||||||||    
T  7596288 gaaaaggtcttgttaatgagtgtctccgggcactctttaagcattttaaaagaagaaattatttcataaaaagagtcaaaaatttcaatttccaatgcat 7596189  T
Q  415 tgattacat 423  Q
    |||||||||    
T  7596188 tgattacat 7596180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 351 - 494
Target Start/End: Complemental strand, 9533625 - 9533482
Alignment:
Q  351 tttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctacatat 450  Q
    ||||||||||  |||| |||| |||||| ||| ||||| | ||| ||||  |||| |||||||||||||||| | ||||||||||||||||  ||  |||    
T  9533625 tttaagcatatcaaaacaagcaattatttttttaaaaaataaaatattttgattttcaatgcattgattacacgcatttttataaatacttattatttat 9533526  T
Q  451 agtccttaaaaagtgtcccgaaggcaatcgttaacatttcccaa 494  Q
    |||| ||||||| |  | ||||| || | |||||||||||||||    
T  9533525 agtctttaaaaaatacctcgaagacactagttaacatttcccaa 9533482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 318 - 422
Target Start/End: Complemental strand, 34299884 - 34299778
Alignment:
Q  318 aaagggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    |||||||||||||||||||||| ||  || |||| ||||||||| ||| | ||||| ||||||||||||||| || |||  ||||||||| ||| ||| |    
T  34299884 aaagggtcttgttaacgagtgcccccggggcactttttaagcatgctagattaagcaattattctttaaaaatgtcaaagttttcaatttacaaagcact 34299785  T
Q  416 gattaca 422  Q
    |||||||    
T  34299784 gattaca 34299778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 492
Target Start/End: Complemental strand, 37129906 - 37129777
Alignment:
Q  363 aaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataa-atactttctacatatagtccttaaaa 461  Q
    ||||||||  |||||||||||||||||||||| |||||||||| |||  |||| |||||||  ||||| |||| |||||| |||| ||| || ||||||     
T  37129906 aaaataagaaattattctttaaaaaagttaaatatttcaatttacaagacattaattacatacattttcataatatacttactacttatggttcttaaag 37129807  T
Q  462 agtgtcccgaaggcaatcgttaacatttccc 492  Q
    |||| |||| |  || |||||||||||||||    
T  37129806 agtg-cccggaaacactcgttaacatttccc 37129777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 375 - 441
Target Start/End: Complemental strand, 40065865 - 40065799
Alignment:
Q  375 tattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    |||||||||||||||||||| ||||  |||| |||| ||| || |||||||||||||||||||||||    
T  40065865 tattctttaaaaaagttaaatattttgattttcaatacatcgaatacatgtatttttataaatactt 40065799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 413
Target Start/End: Complemental strand, 44452176 - 44452086
Alignment:
Q  323 gtcttgttaacgagtgctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgca 413  Q
    ||||||||||||||||| || |||||||||||| ||| ||||| ||||  |||||| ||||||||  | |||  |||||||||||||||||    
T  44452176 gtcttgttaacgagtgccccagacactctttaaacattctaaattaagtaattattatttaaaaatatcaaaagtttcaatttccaatgca 44452086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 4334177 - 4334253
Alignment:
Q  116 tcttggacttagagaattctgtggtattagcttcctccttgcctgtcgaaacacatgctcaaaaatacaagctaaca 192  Q
    ||||||| |||||||||| ||| || || ||||||||||| | ||||||||||||| || ||||||||| |||||||    
T  4334177 tcttggagttagagaattatgtagttttggcttcctccttccttgtcgaaacacatactaaaaaatacaggctaaca 4334253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 365 - 464
Target Start/End: Original strand, 15995902 - 15996002
Alignment:
Q  365 aataagcgattattctttaaaa-aagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctacatatagtccttaaaaag 463  Q
    ||||||| | |||||||||||| |||||||| ||||| |||| ||||||||||||||||  |||||| |||| ||||| ||||  || || |||||||||    
T  15995902 aataagcaactattctttaaaaaaagttaaatatttcgattttcaatgcattgattacacatattttcataattacttgctacgaatggttcttaaaaag 15996001  T
Q  464 t 464  Q
    |    
T  15996002 t 15996002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 344 - 435
Target Start/End: Complemental strand, 676485 - 676395
Alignment:
Q  344 gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataa 435  Q
    |||||||||||| ||| ||||||||||  ||||||  ||||||| |||||| ||||| ||||  |||||||||||||||  |||||||||||    
T  676485 gacactctttaaacattctaaaataagtaattatttattaaaaa-gttaaatatttcgattttaaatgcattgattacacatatttttataa 676395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 322 - 423
Target Start/End: Complemental strand, 35599939 - 35599836
Alignment:
Q  322 ggtcttgttaacgagtgc-tccg-gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    |||||||||||||||||| |||| || ||||||||| ||||||||| || |  |||||||||||||||| | ||| | ||||| || ||||||||||| |    
T  35599939 ggtcttgttaacgagtgcctccgagatactctttaaacatactaaattaggaaattattctttaaaaaattcaaatagttcaaatttcaatgcattgaat 35599840  T
Q  420 acat 423  Q
    ||||    
T  35599839 acat 35599836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 26804103 - 26804057
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||    
T  26804103 attattctttaaaaaagtcaaaaacttcaatttccaatgcattgatt 26804057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 321 - 492
Target Start/End: Original strand, 28770445 - 28770619
Alignment:
Q  321 gggtcttgttaacgagtgc-tccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgat 418  Q
    ||||||||||||||||||| |||||  |||||||||||||| | ||||| ||  ||||||||||  |||||| ||  ||| |||||||||||||||| |     
T  28770445 gggtcttgttaacgagtgcctccggggcactctttaagcatcccaaaattagtaattattcttttgaaaagtcaactattacaatttccaatgcattcaa 28770544  T
Q  419 tacatgtattttta-taaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttccc 492  Q
    ||||    |||| | |||| |||| |||  || ||| |||||| ||||| ||| ||||| |||||||||||||||    
T  28770545 tacacaacttttcattaaaaacttactatttagagtgcttaaagagtgttccggaggcactcgttaacatttccc 28770619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 318 - 422
Target Start/End: Original strand, 47507575 - 47507681
Alignment:
Q  318 aaagggtcttgttaacgagtg-ctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    ||||||||||||||||||||| ||||||  ||||||||||| || |||||| |||  || ||| | ||||||| | ||| |||||||||||| ||| |||    
T  47507575 aaagggtcttgttaacgagtgtctccggggcactctttaaggattctaaaagaagaaataattttataaaaaaatcaaagatttcaatttccgatgtatt 47507674  T
Q  416 gattaca 422  Q
    |||||||    
T  47507675 gattaca 47507681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 349 - 441
Target Start/End: Complemental strand, 3256736 - 3256643
Alignment:
Q  349 tctttaagcatactaaaataagcgattattctttaa-aaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    |||||||||||   ||||||||| |||||||||||| |||||| |||  |||| |||||||||||| ||| ||||  |||||| ||||||||||    
T  3256736 tctttaagcatttcaaaataagcaattattctttaaaaaaagtcaaatgtttcgatttccaatgcactgaatacacatattttcataaatactt 3256643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 4338424 - 4338489
Alignment:
Q  127 gagaattctgtggtattagcttcctccttgcctgtcgaaacacatgctcaaaaatacaagctaaca 192  Q
    ||||||| ||| || || ||||||||||| | ||||||||||||| |||||||||||| |||||||    
T  4338424 gagaattatgtagtcttggcttcctccttccttgtcgaaacacatactcaaaaatacaggctaaca 4338489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 345 - 445
Target Start/End: Complemental strand, 28733870 - 28733769
Alignment:
Q  345 acactctttaagcatactaaaataagcgattattctttaa-aaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttc 443  Q
    |||||||||||||||  |||||||| | |||||||||||| |||||||||| ||||  | |||||   || |||||||||| ||||||| ||||| ||||    
T  28733870 acactctttaagcattttaaaataaacaattattctttaaaaaaagttaaatattttgaattccatgacaatgattacatgcatttttaaaaatattttc 28733771  T
Q  444 ta 445  Q
    ||    
T  28733770 ta 28733769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 420
Target Start/End: Original strand, 19619993 - 19620061
Alignment:
Q  352 ttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    |||||||| ||||| ||||  ||||||||||||||| || |||  ||||||||||||||||| ||||||    
T  19619993 ttaagcatgctaaattaagaaattattctttaaaaatgtcaaagttttcaatttccaatgcactgatta 19620061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 323 - 415
Target Start/End: Complemental strand, 26872918 - 26872827
Alignment:
Q  323 gtcttgttaacgagtgctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    |||||||||||||||||||| |||||| ||||||||| |||||  |||  |||||| |||| |||  | |||  |||||||||||||||||||    
T  26872918 gtcttgttaacgagtgctcc-gacactttttaagcattctaaatcaagtaattattatttataaatatcaaaagtttcaatttccaatgcatt 26872827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 323 - 410
Target Start/End: Complemental strand, 30626207 - 30626119
Alignment:
Q  323 gtcttgttaacgagtgctccgg-acactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaat 410  Q
    |||||||||||||||||||||| ||||||||||||||| || ||  ||   ||||||||| |||||| ||||  | |||||||||||||    
T  30626207 gtcttgttaacgagtgctccggaacactctttaagcattcttaatgaataaattattcttaaaaaaaattaagtacttcaatttccaat 30626119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 324 - 422
Target Start/End: Original strand, 8237922 - 8238021
Alignment:
Q  324 tcttgttaacgagtgc-tccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    |||| ||||||||||| || ||||| | |||||| |||||||| ||||  ||||||||||||||| || |||  ||||| ||| ||||||| ||||||||    
T  8237922 tcttattaacgagtgcctcaggacattatttaagtatactaaattaagtaattattctttaaaaatgtcaaagttttcatttttcaatgcactgattaca 8238021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 21512992 - 21513031
Alignment:
Q  320 agggtcttgttaacgagtgctccggacactctttaagcat 359  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  21512992 agggtcttgttaacgagtgtcccggacactctttaagcat 21513031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 415
Target Start/End: Original strand, 34681661 - 34681756
Alignment:
Q  321 gggtcttgttaacgagtgctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    ||||||| ||||||||||| ||||  || ||||||||||| ||||| || |  |||||| |||| |||||| ||| | ||||||||||||||||||    
T  34681661 gggtcttcttaacgagtgccccggggcagtctttaagcattctaaattaggaaattattttttacaaaagtcaaatagttcaatttccaatgcatt 34681756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 5248717 - 5248671
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    ||||||||||||||| |||||| | | ||||||||||||||||||||    
T  5248717 attattctttaaaaatgttaaaaactccaatttccaatgcattgatt 5248671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 429
Target Start/End: Complemental strand, 44719490 - 44719424
Alignment:
Q  363 aaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtattt 429  Q
    ||||| ||| |||||| ||||||||||| ||||||||| ||||| ||  ||||||||||||| ||||    
T  44719490 aaaattagcaattattttttaaaaaagtcaaacatttcgatttctaaaacattgattacatgcattt 44719424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 320 - 370
Target Start/End: Complemental strand, 46684674 - 46684624
Alignment:
Q  320 agggtcttgttaacgagtgctccggacactctttaagcatactaaaataag 370  Q
    |||||||||||||||||||| ||  |||||||||||| || ||||||||||    
T  46684674 agggtcttgttaacgagtgccccaaacactctttaagaattctaaaataag 46684624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 346 - 423
Target Start/End: Complemental strand, 8920814 - 8920737
Alignment:
Q  346 cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacat 423  Q
    |||||||||||||| | ||||  ||  |||||||  || |||||| |||  |||||||||||||||||||||||||||    
T  8920814 cactctttaagcattccaaaaggagaaattattccatagaaaagtcaaatgtttcaatttccaatgcattgattacat 8920737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 373 - 422
Target Start/End: Original strand, 10453486 - 10453535
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    |||||||||||||||  |||||  ||||||||| ||||||||||||||||    
T  10453486 attattctttaaaaatattaaaattttcaattttcaatgcattgattaca 10453535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 321 - 422
Target Start/End: Complemental strand, 17157908 - 17157804
Alignment:
Q  321 gggtcttgttaacgagtg--ctccggacactctttaagcatactaaaataagcgattatt-ctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||||||||||||||  ||  || |||||||||||||| | ||||  ||  |||||| | | |||||||| |||  |||||||||||||||||||||    
T  17157908 gggtcttgttaacgagtgcccttggggcactctttaagcattccaaaaggagaaattattccataaaaaaagtcaaatgtttcaatttccaatgcattga 17157809  T
Q  418 ttaca 422  Q
    |||||    
T  17157808 ttaca 17157804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 417
Target Start/End: Complemental strand, 20397542 - 20397509
Alignment:
Q  384 aaaaagttaaacatttcaatttccaatgcattga 417  Q
    |||||||||||||||||||||| |||||||||||    
T  20397542 aaaaagttaaacatttcaattttcaatgcattga 20397509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 321 - 415
Target Start/End: Original strand, 27123242 - 27123338
Alignment:
Q  321 gggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    ||||||||||||||||||| ||  || |||||||||||||| | ||| | ||  || ||||||| ||||||| ||  ||| ||||||||||||||||    
T  27123242 gggtcttgttaacgagtgcccccggggcactctttaagcatcccaaatttagtaatcattcttttaaaaagtcaactattacaatttccaatgcatt 27123338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 578 - 642
Target Start/End: Complemental strand, 39773544 - 39773479
Alignment:
Q  578 ggtttagcccttt-taattgatgaatacagtgaaatacaaaacaaatagatgaaataactatgtat 642  Q
    ||||| ||||||| ||||||||||||  |||| |||||||||||| | |||||||||||| |||||    
T  39773544 ggtttggccctttgtaattgatgaatgtagtgcaatacaaaacaattggatgaaataactttgtat 39773479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 27338257 - 27338321
Alignment:
Q  346 cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaat 410  Q
    |||||||||||||| ||||| ||    |||||||||||||||| | ||||| |||||||||||||    
T  27338257 cactctttaagcatgctaaattagaaaattattctttaaaaaaatcaaacagttcaatttccaat 27338321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 33922824 - 33922780
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    |||||||||||||||||| ||| | |||||||| |||||||||||    
T  33922824 attattctttaaaaaagtcaaatagttcaattttcaatgcattga 33922780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 374 - 422
Target Start/End: Original strand, 40722382 - 40722430
Alignment:
Q  374 ttattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    ||||||||||| ||||| ||| |||||||||| ||||||||| ||||||    
T  40722382 ttattctttaagaaagtcaaatatttcaattttcaatgcattaattaca 40722430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 324 - 411
Target Start/End: Complemental strand, 43224221 - 43224133
Alignment:
Q  324 tcttgttaacgagtgctcc-ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatg 411  Q
    |||||||||||| ||| || || |||||||||||||| ||||||| ||  |||||||||| ||||||| ||   || ||||||||||||    
T  43224221 tcttgttaacgaatgcccccgggcactctttaagcatcctaaaattagatattattcttttaaaaagtcaactgttacaatttccaatg 43224133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 6e-39; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 319 - 491
Target Start/End: Complemental strand, 32055480 - 32055306
Alignment:
Q  319 aagggtcttgttaacgagtgctcc-ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacattt-caatttccaatgcattg 416  Q
    |||||||||||| |||||||| || || |||||||||||||||| |||| |||| ||||||||||| |||||| |||||||| | |||||||||||||||    
T  32055480 aagggtcttgttgacgagtgcccccgggcactctttaagcatacaaaaacaagcaattattctttagaaaagtcaaacattttcgatttccaatgcattg 32055381  T
Q  417 attacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttcc 491  Q
    ||||||||||||||||||||||||| |||  ||||||||||||| |||| |  |  |||| ||||||||||||||    
T  32055380 attacatgtatttttataaatacttgctatttatagtccttaaagagtgacatgggggcactcgttaacatttcc 32055306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 323 - 489
Target Start/End: Original strand, 24369378 - 24369545
Alignment:
Q  323 gtcttgttaacgagtgctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattac 421  Q
    |||||||||| |||||| || || |||||||||| ||||||||||||| | ||||||||||| |||||| |||||||||||||||||| ||| ||||||     
T  24369378 gtcttgttaaagagtgcccccgagcactctttaaacatactaaaataaacaattattctttataaaagtcaaacatttcaatttccaaagcactgattat 24369477  T
Q  422 atgta-tttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacattt 489  Q
    ||||| |||||||||||| |||||||||||||||||| || | ||||||| || || ||||||||||||    
T  24369478 atgtattttttataaatattttctacatatagtcctt-aagattgtcccggagacactcgttaacattt 24369545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 342 - 502
Target Start/End: Original strand, 37179682 - 37179842
Alignment:
Q  342 cggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    |||||||||||||||||||| |||| |||  |||||| |||| |||||| ||||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  37179682 cggacactctttaagcataccaaaacaagtaattattttttagaaaagtcaaacatttcgatttccaatgtattgattatatgtatttttataaatactt 37179781  T
Q  442 tctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttcccaaaaagaaat 502  Q
     |||  ||||||||||||||| |||| ||  | || |||||||||||| ||| ||||||||    
T  37179782 gctatttatagtccttaaaaaatgtctcggggacactcgttaacattttccataaagaaat 37179842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 346 - 489
Target Start/End: Complemental strand, 39827260 - 39827116
Alignment:
Q  346 cactctttaagcatactaaaataagcga-ttattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttct 444  Q
    |||||||||||||||  |||| |||| | |||||||||||||| || ||| |||||||||| |||| |||||||||| |||| |||||||||||||| ||    
T  39827260 cactctttaagcatatcaaaacaagcaaattattctttaaaaatgtcaaaaatttcaattttcaattcattgattacttgtaattttataaatacttact 39827161  T
Q  445 acatatagtccttaaaaagtgtcccgaaggcaatcgttaacattt 489  Q
    |  |||||||||||||  || |||||||| || ||||||||||||    
T  39827160 atttatagtccttaaagcgtatcccgaagacactcgttaacattt 39827116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 346 - 493
Target Start/End: Complemental strand, 44690374 - 44690225
Alignment:
Q  346 cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatacttt-ct 444  Q
    |||||||||| ||||||||||||||  |||||  ||||||||||||||| ||||| |||| ||||| | | ||||||| |||||| ||||||||||| |     
T  44690374 cactctttaaacatactaaaataagtaattatcttttaaaaaagttaaatatttcgattttcaatgtaataattacatatattttcataaatactttgcc 44690275  T
Q  445 acatatagtccttaaaa-agtgtcccgaaggcaatcgttaacatttccca 493  Q
    || ||| |||||||||| |||||||||| | || ||||||||||||||||    
T  44690274 acttatggtccttaaaagagtgtcccgaggacactcgttaacatttccca 44690225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 313 - 497
Target Start/End: Complemental strand, 50086553 - 50086368
Alignment:
Q  313 aaaagaaagggtcttgttaacgagtgctccgg-acactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatg 411  Q
    |||| ||| |||||||||||||||||| |||| | ||||||||| ||| | ||||||| | |||||||||||||||| | ||| ||||  |||| |||||    
T  50086553 aaaaaaaaaggtcttgttaacgagtgccccgggaaactctttaaacattccaaaataaacaattattctttaaaaaaatcaaatattttgattttcaatg 50086454  T
Q  412 cattgattacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttcccaaaaa 497  Q
    |||||| ||||  |||||| |||||| ||| | || |||||| |||||| |||| ||||   ||| ||||||||||||||||||||    
T  50086453 cattgaatacacatattttcataaatgcttaccacttatagttcttaaagagtgccccgggagcactcgttaacatttcccaaaaa 50086368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 347 - 467
Target Start/End: Complemental strand, 50343946 - 50343826
Alignment:
Q  347 actctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctac 446  Q
    |||||||||||||  |||||||||  |||||||||||||||||| ||| |||| ||||| ||||| |||||||| ||||||||| |||||| ||| ||||    
T  50343946 actctttaagcattttaaaataagtaattattctttaaaaaagtcaaatattttaattttcaatgtattgattatatgtattttcataaattcttactac 50343847  T
Q  447 atatagtccttaaaaagtgtc 467  Q
     ||  ||||||||||||||||    
T  50343846 ttacggtccttaaaaagtgtc 50343826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 321 - 411
Target Start/End: Original strand, 2063444 - 2063535
Alignment:
Q  321 gggtcttgttaacgagtgctcc-ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatg 411  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||| || |   ||||||||||||||||| ||||| ||||||||||||||    
T  2063444 gggtcttgttaacgagtgctcccggacactctttaagcatgctaaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatg 2063535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 318 - 446
Target Start/End: Complemental strand, 42957113 - 42956982
Alignment:
Q  318 aaagggtcttgttaacgagtg-ctcc-ggacactctttaagcatactaaaataagcgattattcttt-aaaaaagttaaacatttcaatttccaatgcat 414  Q
    ||||||||||||||||||| | | || ||||||||||||| ||| |||||||||||  ||||| ||| |||||| | ||| |||||||||||||||||||    
T  42957113 aaagggtcttgttaacgagagtcaccaggacactctttaaacattctaaaataagcagttattattttaaaaaaatcaaatatttcaatttccaatgcat 42957014  T
Q  415 tgattacatgtatttttataaatactttctac 446  Q
    | ||||||   |||||||||||||||| ||||    
T  42957013 taattacacacatttttataaatacttactac 42956982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 492
Target Start/End: Original strand, 48097923 - 48098093
Alignment:
Q  324 tcttgttaacgagtg-ctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattac 421  Q
    ||||||||||||||| ||||||| |||| |||||| || ||||| ||||  |||||||||||||||||||||| | ||||||||||||| |||| | |||    
T  48097923 tcttgttaacgagtgtctccggagcactttttaagtattctaaattaagaaattattctttaaaaaagttaaatagttcaatttccaatacattaaatac 48098022  T
Q  422 atgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttccc 492  Q
    |  | |||||||||| | || |||  ||    |||||| |||||||||| |  ||||||||||||||||||    
T  48098023 acatgtttttataaaaagttactatttaagaaccttaacaagtgtcccggaaacaatcgttaacatttccc 48098093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 489
Target Start/End: Complemental strand, 54700978 - 54700812
Alignment:
Q  323 gtcttgttaacgagtgc--tccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    ||||||||||||||||   || |||||||||||||||||  |||||||||  |||||||||  ||||||| ||| ||||  |||||||| ||| ||||||    
T  54700978 gtcttgttaacgagtgtcatcgggacactctttaagcattttaaaataagtaattattctt--aaaaagtcaaatattttgatttccaaggcaatgatta 54700881  T
Q  421 catgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacattt 489  Q
    |||| ||||||| |||||||| |||| ||| |  |||||| |||| ||||  |||| | ||||||||||    
T  54700880 catgcatttttaaaaatacttactacttatgggtcttaaagagtgccccgggggcactagttaacattt 54700812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 351 - 460
Target Start/End: Complemental strand, 10095746 - 10095637
Alignment:
Q  351 tttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctacatat 450  Q
    ||||| ||||||||||||| | |||||  ||||||||| | ||| ||||| |||| ||||||| |||||||||| ||||||||||||| ||||||| |||    
T  10095746 tttaaacatactaaaataaacaattatcttttaaaaaaatcaaatatttcgattttcaatgcaatgattacatgcatttttataaatattttctacttat 10095647  T
Q  451 agtccttaaa 460  Q
      ||||||||    
T  10095646 gatccttaaa 10095637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 345 - 465
Target Start/End: Complemental strand, 44670942 - 44670821
Alignment:
Q  345 acactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatacttt-c 443  Q
    |||| ||||||||||||||||| ||   |||||  ||||||||| ||||| ||||| |||||||||||| | ||||||| |||||||||||||| ||| |    
T  44670942 acacactttaagcatactaaaacaaataattatcttttaaaaaaattaaatatttcgatttccaatgcaataattacatatatttttataaatattttcc 44670843  T
Q  444 tacatatagtccttaaaaagtg 465  Q
    ||| ||| ||||||||| ||||    
T  44670842 tacttatggtccttaaagagtg 44670821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 346 - 441
Target Start/End: Complemental strand, 42370424 - 42370329
Alignment:
Q  346 cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgta-tttttataaatactt 441  Q
    |||||||||||||||| |||| |||| ||||||||||| |||||| ||| |||| ||||| ||||||||| |||||||| | |||||||||||||||    
T  42370424 cactctttaagcataccaaaacaagcaattattcttta-aaaagtaaaatattttaattttcaatgcattaattacatgcattttttataaatactt 42370329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 326 - 422
Target Start/End: Original strand, 53261531 - 53261629
Alignment:
Q  326 ttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    |||||||||||||| ||  ||||||||||||||||| ||||| ||||  |||||||||||||||  | |||  ||||||||||||||||| ||||||||    
T  53261531 ttgttaacgagtgcccccaggacactctttaagcatgctaaattaagtaattattctttaaaaatttaaaagttttcaatttccaatgcagtgattaca 53261629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 320 - 441
Target Start/End: Complemental strand, 23016361 - 23016238
Alignment:
Q  320 agggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||||| ||||||| || ||  || |||||||| ||||| | ||| ||||  |||||| |||||| |||| ||||||||||||||||||||||||||    
T  23016361 agggtcttgctaacgagcgcccccggggcactctttgagcattccaaattaagaaattattatttaaagaagtcaaacatttcaatttccaatgcattga 23016262  T
Q  418 ttacatgtatttttataaatactt 441  Q
     |||||  | ||||||||| ||||    
T  23016261 atacatagacttttataaaaactt 23016238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 323 - 423
Target Start/End: Original strand, 40666939 - 40667042
Alignment:
Q  323 gtcttgttaacgagtgctccg--gacactctttaagcatactaaaataagcgattattctttaa-aaaagttaaacatttcaatttccaatgcattgatt 419  Q
    ||||||||||||||||||||   || ||||||||||||| |||||| |||  |||||||  ||| |||||| ||  ||||||||||||||||||||||||    
T  40666939 gtcttgttaacgagtgctccaaagatactctttaagcattctaaaagaagaaattattccataacaaaagtaaataatttcaatttccaatgcattgatt 40667038  T
Q  420 acat 423  Q
    ||||    
T  40667039 acat 40667042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 320 - 490
Target Start/End: Original strand, 47560593 - 47560764
Alignment:
Q  320 agggtcttgttaacgagtg-ctccg-gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||||||||||||||| || || |||||||||||| ||| | ||||||||| |||||| ||||||||| | |||  |||  ||||  ||| ||||||    
T  47560593 agggtcttgttaacgagtgtcttcgagacactctttaatcattccaaaataagcaattatt-tttaaaaaaatcaaatgttttgatttttaatacattga 47560691  T
Q  418 ttacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttc 490  Q
    ||||| | ||||| || ||||||| |||  ||| ||||||||| |||||| |  ||||| |||||||||||||    
T  47560692 ttacacgcattttcattaatacttactatttatggtccttaaagagtgtctcagaggcactcgttaacatttc 47560764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 320 - 465
Target Start/End: Complemental strand, 41370307 - 41370160
Alignment:
Q  320 agggtcttgttaacgagtgct-ccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||||||||||||||| | ||||| ||||| |||||||  | ||| ||||  ||||||  | |||||||||||| |||||||||| |||||||||||    
T  41370307 agggtcttgttaacgagtgtttccggagcactcattaagcaatccaaattaagaaattatttctcaaaaaagttaaatatttcaattttcaatgcattga 41370208  T
Q  418 ttacatgtatttttataaatactttctacatatagtccttaaaaagtg 465  Q
    |||||   ||||| ||||| |||| |||   | |||||||||||||||    
T  41370207 ttacacaaattttcataaaaacttactattcaaagtccttaaaaagtg 41370160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 347 - 469
Target Start/End: Complemental strand, 28005353 - 28005231
Alignment:
Q  347 actctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctac 446  Q
    ||||||||| ||||||||||||||| |||||  ||||||||||| ||| ||||  ||||| |||    | || | ||||||||| |||||||||| ||||    
T  28005353 actctttaaacatactaaaataagcaattatcttttaaaaaagtcaaatattttgatttctaattttataataatatgtattttcataaatacttactac 28005254  T
Q  447 atatagtccttaaaaagtgtccc 469  Q
     |||| | |||||||||||||||    
T  28005253 ttataattcttaaaaagtgtccc 28005231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 321 - 422
Target Start/End: Complemental strand, 36876194 - 36876092
Alignment:
Q  321 gggtcttgttaacgagtgctcc-ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    |||||||||||||||||||||| ||| | ||||||||||| ||||| ||||  | |||||||| |||| || ||   |||||||||||||| ||||||||    
T  36876194 gggtcttgttaacgagtgctcccggatattctttaagcatgctaaattaagtaactattcttttaaaatgtaaatgttttcaatttccaatacattgatt 36876095  T
Q  420 aca 422  Q
    |||    
T  36876094 aca 36876092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 422
Target Start/End: Complemental strand, 53737930 - 53737829
Alignment:
Q  323 gtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    |||||| |||||||||| ||  || |||||||||||| | | ||||||||  |||||||||||||||| | ||| ||||| |||||||||||||||| ||    
T  53737930 gtcttgctaacgagtgcccccagggcactctttaagcgttccaaaataagaaattattctttaaaaaattcaaatatttcgatttccaatgcattgaata 53737831  T
Q  421 ca 422  Q
    ||    
T  53737830 ca 53737829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 326 - 419
Target Start/End: Original strand, 29352444 - 29352537
Alignment:
Q  326 ttgttaacgagtgctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    |||||||||| | ||| ||||||||||||| ||| ||||||||||| |||||||||| ||||| | ||| ||||  | || |||||||||||||    
T  29352444 ttgttaacgaatactctggacactctttaatcattctaaaataagcaattattcttttaaaaaataaaatattttgactttcaatgcattgatt 29352537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 324 - 422
Target Start/End: Complemental strand, 41956565 - 41956465
Alignment:
Q  324 tcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattac 421  Q
    |||| ||||||||||| ||  ||||||||||||||||  | ||||||||  | |||||||||| ||| ||||| |||||||||| ||| |||||||||||    
T  41956565 tcttattaacgagtgcccccaggacactctttaagcaatccaaaataagaaagtattctttaagaaatttaaatatttcaattttcaacgcattgattac 41956466  T
Q  422 a 422  Q
    |    
T  41956465 a 41956465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 344 - 473
Target Start/End: Original strand, 50774954 - 50775083
Alignment:
Q  344 gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttc 443  Q
    |||||| |||||| || ||||||||||  |||||||||||||||||||||| ||||  |||| |||   ||||||||||  |||||| ||||||| ||      
T  50774954 gacactttttaagtattctaaaataagtaattattctttaaaaaagttaaatattttgattttcaacatattgattacacatattttcataaatatttat 50775053  T
Q  444 tacatatagtccttaaaaagtgtcccgaag 473  Q
    ||| |||  | |||||||||||||| ||||    
T  50775054 tacttatgattcttaaaaagtgtcctgaag 50775083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 319 - 422
Target Start/End: Complemental strand, 52650830 - 52650725
Alignment:
Q  319 aagggtcttgttaacgagtgc-tccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattg 416  Q
    ||||||||||||||||||||| |||||| |||||||||| ||| ||||| ||||  ||||||||||| ||| || |||  ||||||||| |||| || ||    
T  52650830 aagggtcttgttaacgagtgcctccggaacactctttaaacatgctaaattaagaaattattctttacaaatgtcaaaattttcaattttcaattcactg 52650731  T
Q  417 attaca 422  Q
    ||||||    
T  52650730 attaca 52650725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 578 - 642
Target Start/End: Original strand, 52723824 - 52723889
Alignment:
Q  578 ggtttagcccttt-taattgatgaatacagtgaaatacaaaacaaatagatgaaataactatgtat 642  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||| | |||||||||||| |||||    
T  52723824 ggtttagccctttgtaattgatgaatgtagtgaaatacaaaacaattggatgaaataactttgtat 52723889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 422
Target Start/End: Complemental strand, 13800831 - 13800731
Alignment:
Q  322 ggtcttgttaacgagtgctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattac 421  Q
    |||||||||||||||||| ||  |||||||||||| || ||||| | ||  | |||||||||||||||| ||| ||| ||| |||| || ||||||||||    
T  13800831 ggtcttgttaacgagtgcccccaacactctttaaggatcctaaatttagaaaatattctttaaaaaagtcaaatattacaaattcctatacattgattac 13800732  T
Q  422 a 422  Q
    |    
T  13800731 a 13800731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 321 - 436
Target Start/End: Complemental strand, 19597287 - 19597171
Alignment:
Q  321 gggtcttgttaacgagtgctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    |||||||||||||  ||||||| || |||| ||||||||| ||| | || |  ||||||||||||||| || ||| | ||||||||| |||||||||| |    
T  19597287 gggtcttgttaacatgtgctcccgaacactttttaagcattctacattaggaaattattctttaaaaatgtcaaatagttcaatttctaatgcattgaat 19597188  T
Q  420 acatgtatttttataaa 436  Q
    ||||  |||||||||||    
T  19597187 acataaatttttataaa 19597171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 318 - 441
Target Start/End: Original strand, 39274927 - 39275051
Alignment:
Q  318 aaagggtcttgttaacgagtgctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattg 416  Q
    ||||| |||| ||||||||||| ||||  |||| ||||||||| | ||| ||| | |||||| ||| ||||| | ||| |||||||||||||||||||||    
T  39274927 aaaggatcttattaacgagtgccccggggcactatttaagcattcaaaagtaaacaattatttttttaaaaaatcaaatatttcaatttccaatgcattg 39275026  T
Q  417 attacatgtatttttataaatactt 441  Q
    | || | | ||||| ||||||||||    
T  39275027 aatagacgcattttgataaatactt 39275051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 324 - 423
Target Start/End: Complemental strand, 1696323 - 1696222
Alignment:
Q  324 tcttgttaacgagtgctccggacac--tctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattac 421  Q
    ||||||||||||||| ||| || ||  |||||||| ||| ||||| |||  |||||||  ||||||||  ||| |||||||||||| |||||||||||||    
T  1696323 tcttgttaacgagtgttcccgaaacattctttaagtatattaaaagaagatattattccataaaaaagacaaatatttcaatttccgatgcattgattac 1696224  T
Q  422 at 423  Q
    ||    
T  1696223 at 1696222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 411
Target Start/End: Complemental strand, 24546844 - 24546754
Alignment:
Q  322 ggtcttgttaacgagtgctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatg 411  Q
    ||||||||||||||||||||  || ||||||||||||||  |||| || |  |||||||||||||||| | || || ||||||||||||||    
T  24546844 ggtcttgttaacgagtgctctagaacactctttaagcatgttaaattaggaaattattctttaaaaaattcaagcagttcaatttccaatg 24546754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 318 - 411
Target Start/End: Original strand, 49400578 - 49400672
Alignment:
Q  318 aaagggtcttgttaacgagtgctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatg 411  Q
    ||||||||||||||||||||||||| || |||| ||||||||| ||||| | ||  |||||||||| ||||| | ||  ||| ||||||||||||    
T  49400578 aaagggtcttgttaacgagtgctccagagcactatttaagcatcctaaatttagtaattattcttttaaaaaatcaactattacaatttccaatg 49400672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 320 - 415
Target Start/End: Complemental strand, 49532389 - 49532293
Alignment:
Q  320 agggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    |||||||||||||||||||| ||  ||||||||| ||||||| | ||| ||||  ||||||||||| |||| | ||| | ||||||||||||||||||    
T  49532389 agggtcttgttaacgagtgcccccgggacactctgtaagcattccaaattaagaaattattctttataaaa-tcaaataattcaatttccaatgcatt 49532293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 424
Target Start/End: Original strand, 10575981 - 10576061
Alignment:
Q  343 ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatg 424  Q
    |||||||||||||||||  |||||||||  |||||| || |||||| | ||| ||||  |||||||||||||||||||||||    
T  10575981 ggacactctttaagcattttaaaataagtaattatttttcaaaaaa-tcaaatattttgatttccaatgcattgattacatg 10576061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 407 - 492
Target Start/End: Complemental strand, 32693002 - 32692917
Alignment:
Q  407 caatgcattgattacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttccc 492  Q
    |||| |||||||||||  |||||| ||||| |||| |||   || ||||||||| ||||||||| ||||| |||||||||||||||    
T  32693002 caatacattgattacacatattttcataaaaacttactattaatggtccttaaagagtgtcccggaggcactcgttaacatttccc 32692917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 415
Target Start/End: Complemental strand, 45900287 - 45900191
Alignment:
Q  321 gggtcttgttaacgagtgctccgga--cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    ||||||||||||||||||| || ||  |||||||||||||| ||||| | ||| |||||||||| | ||||| ||  ||  ||||||||||||||||    
T  45900287 gggtcttgttaacgagtgcccccgaggcactctttaagcatcctaaatttagcaattattcttttataaagtcaactatcacaatttccaatgcatt 45900191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 47937832 - 47937917
Alignment:
Q  321 gggtcttgttaacgagtgctccggac-actctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaattt 405  Q
    ||||||||||||||||||  |||||  ||||||||| ||||||||| || |  |||||||||||||||||| |||  |||||||||    
T  47937832 gggtcttgttaacgagtgtgccggagtactctttaaacatactaaattatgtaattattctttaaaaaagtcaaagttttcaattt 47937917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 373 - 441
Target Start/End: Complemental strand, 24324312 - 24324244
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    |||||||| ||||||| | ||| |||| ||||| |||||||| ||||||||  ||||||||||||||||    
T  24324312 attattctctaaaaaaataaaatattttaattttcaatgcatagattacatacatttttataaatactt 24324244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 415
Target Start/End: Original strand, 51834906 - 51834978
Alignment:
Q  343 ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    ||||||||||||||||| ||||| | ||| |||||||||| ||||||| ||  |||  |||||||||||||||    
T  51834906 ggacactctttaagcatcctaaatttagcaattattcttttaaaaagtcaactattataatttccaatgcatt 51834978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 362 - 441
Target Start/End: Complemental strand, 16822359 - 16822280
Alignment:
Q  362 taaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    |||||||||| |||||| ||| ||||| | ||| ||||||||||||||   |||| ||||||| ||||| ||||||||||    
T  16822359 taaaataagcaattatttttttaaaaaatcaaatatttcaatttccaagatattgtttacatgcattttcataaatactt 16822280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 375 - 422
Target Start/End: Original strand, 24981816 - 24981863
Alignment:
Q  375 tattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    ||||||||||||||||||||| || ||| ||| |||||||||||||||    
T  24981816 tattctttaaaaaagttaaacgttacaaattcaaatgcattgattaca 24981863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 422
Target Start/End: Original strand, 40252648 - 40252727
Alignment:
Q  343 ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    ||||||||||||| |||| |||| ||||  ||| || |||||||| ||||||  ||||||||| |||| |||||||||||    
T  40252648 ggacactctttaaacatattaaattaagtaattgttatttaaaaatgttaaagttttcaattttcaatacattgattaca 40252727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 433
Target Start/End: Original strand, 41468115 - 41468166
Alignment:
Q  382 taaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttat 433  Q
    ||||||||||||| ||| | |||||  |||||||||||||||||||||||||    
T  41468115 taaaaaagttaaatattccgatttctgatgcattgattacatgtatttttat 41468166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 5047226 - 5047272
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    ||||||| ||| |||||| ||| ||||||||||||||||||||||||    
T  5047226 attattcattacaaaagtcaaaaatttcaatttccaatgcattgatt 5047272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 5091926 - 5091880
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    |||||||||||||||||| ||| | |||||||| |||||||||||||    
T  5091926 attattctttaaaaaagtcaaaaacttcaattttcaatgcattgatt 5091880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 31871139 - 31871089
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacat 423  Q
    |||||| | ||||||||| ||| |||||||||||| |||||||||||||||    
T  31871139 attattttataaaaaagtaaaatatttcaatttccgatgcattgattacat 31871089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 53919890 - 53919936
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    |||||||| ||||||||| ||| |||||||||||| |||||||||||    
T  53919890 attattctataaaaaagtcaaaaatttcaatttccgatgcattgatt 53919936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 323 - 423
Target Start/End: Original strand, 12329264 - 12329365
Alignment:
Q  323 gtcttgttaacgagtgctccggacactctttaagcatactaaaataagcgattatt-ctttaaaaaagttaaacatttcaatttccaatgcattgattac 421  Q
    ||||||||||||||||| ||   ||||||||||||||   ||||  ||  |||||| | | |||||||| ||| ||||||||||| ||||||||||||||    
T  12329264 gtcttgttaacgagtgccccatgcactctttaagcatttcaaaaggagaaattattccataaaaaaagtcaaatatttcaatttcaaatgcattgattac 12329363  T
Q  422 at 423  Q
    ||    
T  12329364 at 12329365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 373 - 422
Target Start/End: Complemental strand, 23133132 - 23133083
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    ||||||| ||||||||||| |||| |||||||||| ||||||||| ||||    
T  23133132 attattccttaaaaaagtttaacacttcaatttccgatgcattgaataca 23133083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 422
Target Start/End: Complemental strand, 25115399 - 25115298
Alignment:
Q  322 ggtcttgttaacgagtgc-tccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    |||||||||||| ||||| || |||||||||||||| || | ||| | ||  |||||| ||| ||||||||||  ||| |||||||||||||| ||| ||    
T  25115399 ggtcttgttaacaagtgcatcaggacactctttaagaatccaaaatttagtaattattattttaaaaagttaactattacaatttccaatgcagtgaata 25115300  T
Q  421 ca 422  Q
    ||    
T  25115299 ca 25115298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 373 - 430
Target Start/End: Original strand, 33982447 - 33982504
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttt 430  Q
    |||||| | ||||||||||||| ||||| |||||| || |||||||||||| ||||||    
T  33982447 attattttataaaaaagttaaatatttcgatttccgatacattgattacatatatttt 33982504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 347 - 415
Target Start/End: Original strand, 2818355 - 2818423
Alignment:
Q  347 actctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    |||||||||||||  |||| ||||  |||||||||| |||| || ||| | ||||||||||||||||||    
T  2818355 actctttaagcattttaaattaagaaattattcttttaaaaggtcaaaaagttcaatttccaatgcatt 2818423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 383 - 423
Target Start/End: Original strand, 18089650 - 18089690
Alignment:
Q  383 aaaaaagttaaacatttcaatttccaatgcattgattacat 423  Q
    |||||||| ||| |||||||||||||||||||| |||||||    
T  18089650 aaaaaagtcaaatatttcaatttccaatgcatttattacat 18089690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 324 - 422
Target Start/End: Complemental strand, 23136642 - 23136542
Alignment:
Q  324 tcttgttaacgagtg-ctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattac 421  Q
    ||||||||||||||| ||||| | ||||| ||||| ||| |||| ||||  |||||||||| ||||  | |||  ||||||||||||||||| |||||||    
T  23136642 tcttgttaacgagtgtctccgaagcactccttaagtatattaaattaagtaattattcttttaaaatttaaaagttttcaatttccaatgcactgattac 23136543  T
Q  422 a 422  Q
    |    
T  23136542 a 23136542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 383 - 423
Target Start/End: Original strand, 34235945 - 34235985
Alignment:
Q  383 aaaaaagttaaacatttcaatttccaatgcattgattacat 423  Q
    |||||||| ||| |||||||||| |||||||||||||||||    
T  34235945 aaaaaagtcaaaaatttcaattttcaatgcattgattacat 34235985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 320 - 388
Target Start/End: Original strand, 43956106 - 43956174
Alignment:
Q  320 agggtcttgttaacgagtgctccggacactctttaagcatactaaaataagcgattattctttaaaaaa 388  Q
    |||||||||||||| ||||  |||||||||||||||| || ||||| | | ||||||||| || |||||    
T  43956106 agggtcttgttaacaagtgtcccggacactctttaaggatcctaaatttaacgattattccttcaaaaa 43956174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 373 - 433
Target Start/End: Original strand, 49144785 - 49144845
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttat 433  Q
    |||||| | ||||||||||||| ||||  |||| | ||||||||||||||| |||||||||    
T  49144785 attattttataaaaaagttaaaaattttgattttcgatgcattgattacatatatttttat 49144845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 375 - 419
Target Start/End: Original strand, 49360068 - 49360112
Alignment:
Q  375 tattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    |||||||||||||||| ||| | | ||||||||||||||||||||    
T  49360068 tattctttaaaaaagtcaaaaactccaatttccaatgcattgatt 49360112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 4e-37; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 321 - 468
Target Start/End: Original strand, 16717579 - 16717726
Alignment:
Q  321 gggtcttgttaacgagtgctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||| ||||| ||||  |||||||| ||||||||||    
T  16717579 gggtcttgttaacgagtgctccagacactctttaagcattctaaaataagtaattattctttaaaaaaattaaatattttgatttccaaagcattgatta 16717678  T
Q  421 catgtatttttataaatactttctacatatagtccttaaaaagtgtcc 468  Q
     ||| ||||| |||||||||| |||| |||  |||||||| |||||||    
T  16717679 tatgcattttcataaatacttactacttatgttccttaaagagtgtcc 16717726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 322 - 491
Target Start/End: Original strand, 13811010 - 13811179
Alignment:
Q  322 ggtcttgttaacgagtgctccgga--cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    ||||||||| |||||||| |||||  ||||||||||||| || |||| |||| |||||||||||||||||| ||| |||| ||||||||||||||||||     
T  13811010 ggtcttgtttacgagtgc-ccggaggcactctttaagca-accaaaacaagcaattattctttaaaaaagtaaaatattttaatttccaatgcattgatc 13811107  T
Q  420 acatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttcc 491  Q
    ||| ||||||||||||||||||||||  ||||| ||||||| ||||||||| || || | ||||||||||||    
T  13811108 acacgtatttttataaatactttctatttatagcccttaaagagtgtcccggagacactggttaacatttcc 13811179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 347 - 491
Target Start/End: Complemental strand, 2826066 - 2825922
Alignment:
Q  347 actctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctac 446  Q
    ||||||||||||||||||||||||  |||||| ||||||||||| ||| ||||| |||||||||||||||||||||   |||||||||||||||| ||||    
T  2826066 actctttaagcatactaaaataagaaattattttttaaaaaagtaaaatatttcgatttccaatgcattgattacacacatttttataaatacttactac 2825967  T
Q  447 atatagtccttaaaaagtgtcccgaaggcaatcgttaacatttcc 491  Q
     |||||  |||||| |||  ||||  |||| ||||||||||||||    
T  2825966 ttatagctcttaaagagtaccccgggggcactcgttaacatttcc 2825922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 346 - 494
Target Start/End: Original strand, 8964387 - 8964534
Alignment:
Q  346 cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttcta 445  Q
    |||| ||||||||| ||||| ||||  |||||||||||||||||| ||| |||||||||||||||||||||||||||   ||||| ||||||||||  ||    
T  8964387 cactgtttaagcattctaaattaagtaattattctttaaaaaagtaaaatatttcaatttccaatgcattgattacacaaattttcataaatacttatta 8964486  T
Q  446 catatagtccttaaaaagtgtcccgaaggcaatcgttaacatttcccaa 494  Q
    ||||| ||||||||| |||  |||| | |||||||||||||||||||||    
T  8964487 catatggtccttaaagagtaccccgga-gcaatcgttaacatttcccaa 8964534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 320 - 492
Target Start/End: Original strand, 3882583 - 3882757
Alignment:
Q  320 agggtcttgttaacgagtgc--tccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||||||||||||||||  || || |||||||||||||| ||||||||||| ||||||||||||||| || ||| |||||  ||| |||||||||||    
T  3882583 agggtcttgttaacgagtgccctcggggcactctttaagcattctaaaataagcaattattctttaaaaaggtcaaatatttcggttttcaatgcattga 3882682  T
Q  418 ttacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatttccc 492  Q
    |||||   ||||| || | ||||| |||| ||| || |||||| |||||||||  |||| |||||||||||||||    
T  3882683 ttacacacattttcatgagtacttactacttatggttcttaaagagtgtcccgggggcactcgttaacatttccc 3882757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 347 - 491
Target Start/End: Original strand, 27133072 - 27133216
Alignment:
Q  347 actctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctac 446  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| | ||| ||| ||||||||||||||||||| ||| ||||||| ||| |||| ||||    
T  27133072 actctttaaacatactaaaataagcaattattctttaaaaaagtcatacaattcgatttccaatgcattgattatatgcatttttaaaaacacttactac 27133171  T
Q  447 atatagtccttaaaaagtgtcccgaaggcaatcgttaacatttcc 491  Q
     ||||||| ||||| |||| |||  ||||| |  |||||||||||    
T  27133172 ttatagtctttaaagagtgaccctgaggcacttattaacatttcc 27133216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 320 - 446
Target Start/End: Original strand, 18223081 - 18223209
Alignment:
Q  320 agggtcttgttaacgagtgc--tccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||| |||||||||||||   || ||||||| ||||||||||| |||| |||| |||||||||||||||| |  || ||||||||||||||||||||||    
T  18223081 agggttttgttaacgagtgtcttcgggacactttttaagcataccaaaacaagcaattattctttaaaaaaatagaatatttcaatttccaatgcattga 18223180  T
Q  418 ttacatgtatttttataaatactttctac 446  Q
    ||| | | |||||||||||||||| ||||    
T  18223181 ttatacgcatttttataaatacttgctac 18223209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 2888930 - 2889050
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaa 472  Q
    |||||| ||||||||||||||| ||||| |||||||||| ||||| ||||    |||| |||||||| | |||| ||||||||||||| ||||||||||     
T  2888930 attattttttaaaaaagttaaatatttcgatttccaatgtattgactacacactttttcataaatacatactacttatagtccttaaagagtgtcccgat 2889029  T
Q  473 ggcaatcgttaacatttccca 493  Q
    |||| | |||| |||||||||    
T  2889030 ggcacttgttaccatttccca 2889050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 320 - 489
Target Start/End: Complemental strand, 42924555 - 42924386
Alignment:
Q  320 agggtcttgttaacgagtg-ctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgat 418  Q
    |||||||||| |||||||| ||| |  |||||||||||||| |||||| |||  |||||| || |||||| | ||| |||||||||| ||| | ||||||    
T  42924555 agggtcttgtcaacgagtgtctcggtgcactctttaagcattctaaaagaagtaattatttttaaaaaaaatcaaatatttcaattttcaacgtattgat 42924456  T
Q  419 tacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacattt 489  Q
    |||||| ||||| ||||||| || |||  ||| | |||| |||||||||||| || || ||||||||||||    
T  42924455 tacatgcattttcataaatatttactatttatggacctt-aaaagtgtcccggagacactcgttaacattt 42924386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 318 - 438
Target Start/End: Original strand, 6797163 - 6797284
Alignment:
Q  318 aaagggtcttgttaacga-gtgctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattg 416  Q
    |||||||||||||||||| || | | ||||||||||||| ||||||||||||| | |||||  ||||||||||| ||| ||||   ||| ||||||| |     
T  6797163 aaagggtcttgttaacgatgtccccgggacactctttaaacatactaaaataatcaattatcatttaaaaaagtcaaatattttgtttttcaatgcaata 6797262  T
Q  417 attacatgtatttttataaata 438  Q
    |||||||||||||| |||||||    
T  6797263 attacatgtattttcataaata 6797284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 323 - 446
Target Start/End: Original strand, 18227092 - 18227217
Alignment:
Q  323 gtcttgttaacgagtg-ctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    |||||||||||||||| ||||||| |||||||||| |||  |||||||||  ||||||||| | |||||| ||| ||||| |||| ||||||||||||||    
T  18227092 gtcttgttaacgagtgtctccggaacactctttaaacattataaaataagtaattattcttcataaaagtcaaatatttcgattttcaatgcattgatta 18227191  T
Q  421 catgtatttttataaatactttctac 446  Q
     ||  ||||| |||||||||| ||||    
T  18227192 aatacattttcataaatacttactac 18227217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 318 - 460
Target Start/End: Original strand, 25622499 - 25622642
Alignment:
Q  318 aaagggtcttgttaacgagtgctccgga--cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    ||||||||||||||||||||||||| ||  |||||||||| ||| ||||| ||||  |||||| ||||||||  | ||| ||| |||||| |||||||||    
T  25622499 aaagggtcttgttaacgagtgctcccgatgcactctttaaacattctaaattaagtaattatt-tttaaaaatatcaaatattacaattttcaatgcatt 25622597  T
Q  416 gattacatgtatttttataaatactttctacatatagtccttaaa 460  Q
     ||||||| | |||| ||||||| || |||| ||||| |||||||    
T  25622598 aattacatattttttcataaatatttactacttatagaccttaaa 25622642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 322 - 406
Target Start/End: Complemental strand, 45076264 - 45076179
Alignment:
Q  322 ggtcttgttaacgagtgctccg-gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttc 406  Q
    |||||| ||||||||||  ||| | |||||||||| ||||||||||||||| |||||||||||||||||||||| |||| ||||||    
T  45076264 ggtcttattaacgagtgtcccgaggcactctttaaacatactaaaataagcaattattctttaaaaaagttaaatattttaatttc 45076179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 321 - 423
Target Start/End: Original strand, 13538363 - 13538468
Alignment:
Q  321 gggtcttgttaacgagtgctccgga---cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||||||||||||||| || ||   |||||||||||||||||||| ||    |||||||||||||||| | ||| | ||||||||||||||||||||    
T  13538363 gggtcttgttaacgagtgcccccgagggcactctttaagcatactaaattagaaaattattctttaaaaaattcaaataattcaatttccaatgcattga 13538462  T
Q  418 ttacat 423  Q
     |||||    
T  13538463 atacat 13538468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 310 - 465
Target Start/End: Complemental strand, 11001592 - 11001436
Alignment:
Q  310 taaaaaagaaagggtcttgttaacgagtgc--tccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttcc 407  Q
    ||||||| ||| |||||||||||||||||   |||| |||| ||| || |||  |||||||||| |||||| |||||||| || |||  |||| |||| |    
T  11001592 taaaaaaaaaaaggtcttgttaacgagtgtcttccgaacacacttcaaacattttaaaataagcaattattttttaaaaa-gtcaaatgtttcgattttc 11001494  T
Q  408 aatgcattgattacatgtatttttataaatactttctacatatagtccttaaaaagtg 465  Q
    |||  ||| |||||| || |||| |||||||||| || ||||||||||||||||||||    
T  11001493 aatatattaattacacgttttttcataaatacttactccatatagtccttaaaaagtg 11001436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 347 - 489
Target Start/End: Complemental strand, 37617499 - 37617357
Alignment:
Q  347 actctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctac 446  Q
    |||||||||||||  ||||||||   |||||||||||||||| ||||| ||||  ||||||||| |||||||| |||  ||||| ||||| |||| ||||    
T  37617499 actctttaagcattttaaaataaataattattctttaaaaaaattaaatatttttatttccaatacattgattgcatacattttcataaacacttgctac 37617400  T
Q  447 atatagtccttaaaaagtgtcccgaaggcaatcgttaacattt 489  Q
     |||  || ||||||| ||||  ||||||| || |||||||||    
T  37617399 ttatgatctttaaaaaatgtcatgaaggcattcattaacattt 37617357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 323 - 445
Target Start/End: Original strand, 20128300 - 20128424
Alignment:
Q  323 gtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    ||||||| ||||||||| ||  |||||||||||||| || ||||| | |    ||||||||||||||||| |||  || ||| |||||||||||||||||    
T  20128300 gtcttgtaaacgagtgcccccgggacactctttaaggatcctaaatttataatttattctttaaaaaagtcaaatgttacaaattccaatgcattgatta 20128399  T
Q  421 catgtatttttataaatactttcta 445  Q
    || ||||||||||||| | ||||||    
T  20128400 cacgtatttttataaaaaatttcta 20128424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 319 - 423
Target Start/End: Complemental strand, 5962105 - 5961997
Alignment:
Q  319 aagggtcttgttaacgagtgc-tccg-gacactctttaagcatactaaaataagcgat-tattctttaaaaaag-ttaaacatttcaatttccaatgcat 414  Q
    ||||||||||||||||||||| |||| |||||||||||||||| |||||| |||  |  |||||  |||||||  ||||| |||||||||||||||||||    
T  5962105 aagggtcttgttaacgagtgcctccgagacactctttaagcattctaaaagaagaaaaatattccataaaaaaaattaaatatttcaatttccaatgcat 5962006  T
Q  415 tgattacat 423  Q
    |||||||||    
T  5962005 tgattacat 5961997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 323 - 430
Target Start/End: Complemental strand, 44941216 - 44941108
Alignment:
Q  323 gtcttgttaacgagtgctccg-gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattac 421  Q
    ||||||||||||||||| | | ||||||||||||| || |||||| |||  | |||  | ||||||||||||| ||||| |||||| |||||||||||||    
T  44941216 gtcttgttaacgagtgccctgagacactctttaaggattctaaaagaagaaagtatgttataaaaaagttaaagatttcgatttccgatgcattgattac 44941117  T
Q  422 atgtatttt 430  Q
    || ||||||    
T  44941116 atatatttt 44941108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 323 - 423
Target Start/End: Complemental strand, 6761862 - 6761760
Alignment:
Q  323 gtcttgttaacgagtgctccgga--cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    ||||||||||| |||||| | ||  |||||||||||||| | |||| ||   || ||||| ||||||||| ||| |||||||||||||||||||||||||    
T  6761862 gtcttgttaacaagtgcttccgaggcactctttaagcattccaaaagaataaatcattctataaaaaagtcaaatatttcaatttccaatgcattgatta 6761763  T
Q  421 cat 423  Q
    |||    
T  6761762 cat 6761760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 315 - 411
Target Start/End: Original strand, 32859747 - 32859845
Alignment:
Q  315 aagaaagggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatg 411  Q
    |||| |||||||||||||||||||| ||  || |||||||||| ||| ||||| || |   ||||||||||||||||| ||||| ||||||||||||||    
T  32859747 aagatagggtcttgttaacgagtgcccccagggcactctttaaacatgctaaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatg 32859845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 33276005 - 33275940
Alignment:
Q  345 acactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaat 410  Q
    ||||||||||||||| |||||| |||  |||||| ||||||||||||||| |||||||||| ||||    
T  33276005 acactctttaagcattctaaaacaagaaattattttttaaaaaagttaaatatttcaattttcaat 33275940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 351 - 468
Target Start/End: Original strand, 35312103 - 35312220
Alignment:
Q  351 tttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctacatat 450  Q
    ||||||||| ||||||||| | | | |||||||||||| ||||| |||| ||||| ||||| ||| |||||||  ||||||||||||| || |||  |||    
T  35312103 tttaagcattctaaaataaacaaattttctttaaaaaaattaaatattttaatttacaatgtattcattacatacatttttataaatatttactatttat 35312202  T
Q  451 agtccttaaaaagtgtcc 468  Q
     |||||||| || |||||    
T  35312203 ggtccttaagaaatgtcc 35312220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 321 - 423
Target Start/End: Original strand, 42966924 - 42967029
Alignment:
Q  321 gggtcttgttaacgagtgc-tccg-gacactctttaagcatactaaaataagcgattatt-ctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||||| | ||||||| |||| ||||||||||||| ||||||||| |||  |||||| | | |||||||||||| ||||||||| || |||||||||    
T  42966924 gggtcttgtcagcgagtgcctccgagacactctttaagaatactaaaagaagaaattatttcataaaaaaagttaaatatttcaattcccgatgcattga 42967023  T
Q  418 ttacat 423  Q
    ||||||    
T  42967024 ttacat 42967029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 435
Target Start/End: Original strand, 10824649 - 10824721
Alignment:
Q  363 aaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataa 435  Q
    |||||||||  ||||||||| ||||||| |||||||| |||||||||   |||||||||||||||||| ||||    
T  10824649 aaaataagcagttattcttttaaaaagtcaaacattttaatttccaagatattgattacatgtattttcataa 10824721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 324 - 465
Target Start/End: Complemental strand, 14102435 - 14102291
Alignment:
Q  324 tcttgttaacgagtgc-tccgga-cactctttaagcatactaaaataagcgattattctttaaaaaa-gttaaacatttcaatttccaatgcattgatta 420  Q
    |||||||||||||||| |||||| |||||||||| ||| | ||||||||  ||||||    |||||| |||||| ||||| ||||||||| |||||||||    
T  14102435 tcttgttaacgagtgcctccggagcactctttaaacatgccaaaataagaaattatttaaaaaaaaaagttaaatatttcgatttccaatacattgatta 14102336  T
Q  421 catgtatttttataaatactttctacatatagtccttaaaaagtg 465  Q
    ||    |||| ||||||| || |||| ||||||||||||| ||||    
T  14102335 cacactttttcataaatagttactacttatagtccttaaagagtg 14102291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 318 - 467
Target Start/End: Complemental strand, 24762855 - 24762704
Alignment:
Q  318 aaagggtcttgttaacgagtgc--tccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    ||||||||||||||||||||||  || || ||||||||||| || | ||| | ||  | ||||| |||||||||| ||| ||| ||| |||||||  |||    
T  24762855 aaagggtcttgttaacgagtgccttcaggtcactctttaaggatcccaaatttagaaaatattccttaaaaaagtcaaatattacaaattccaatatatt 24762756  T
Q  416 gattacatgtatttttataaatactttctacatatagtccttaaaaagtgtc 467  Q
    ||||| |  |||||||||||| |||| ||| | || ||||||||| ||||||    
T  24762755 gattatacatatttttataaaaacttactagaaatggtccttaaagagtgtc 24762704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 373 - 436
Target Start/End: Complemental strand, 9153558 - 9153495
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaa 436  Q
    |||||||||||||||||  ||||| |||||||||||||||||||| ||||   |||||||||||    
T  9153558 attattctttaaaaaaggcaaacacttcaatttccaatgcattgaatacacaaatttttataaa 9153495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 344 - 441
Target Start/End: Complemental strand, 2517358 - 2517260
Alignment:
Q  344 gacactctttaagcatactaaaataagcgattattctttaaa-aaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    ||||||||||||| || ||||||||||| ||| || |||    ||| | ||| |||||||||| |||||||||||||||| ||||||| ||||||||||    
T  2517358 gacactctttaagtattctaaaataagcaatttttttttttttaaaataaaatatttcaattttcaatgcattgattacacgtattttcataaatactt 2517260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 375 - 492
Target Start/End: Original strand, 24765359 - 24765474
Alignment:
Q  375 tattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaagg 474  Q
    ||||| |||||||| | ||| ||| ||| |||||||||||||||||||  |||||||||||  |||| ||| | || ||||||||| |||| || |  ||    
T  24765359 tattccttaaaaaaatcaaatattacaaattccaatgcattgattacacatatttttataataacttactagaaatggtccttaaagagtgcccgg--gg 24765456  T
Q  475 caatcgttaacatttccc 492  Q
    || |||||||||||||||    
T  24765457 cactcgttaacatttccc 24765474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 383 - 441
Target Start/End: Complemental strand, 26408415 - 26408357
Alignment:
Q  383 aaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    |||||||| ||| ||||||||||| ||| |||||||||||  |||||||||||||||||    
T  26408415 aaaaaagtaaaatatttcaatttctaatacattgattacacatatttttataaatactt 26408357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 318 - 422
Target Start/End: Original strand, 31513718 - 31513823
Alignment:
Q  318 aaagggtcttgttaacgagtg-ctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    |||||||||||||| |||||| ||||||  |||||||||||| | ||||||||||  |||||| ||  ||||| |||||  |||| ||||||||||||||    
T  31513718 aaagggtcttgttagcgagtgtctccggggcactctttaagctttctaaaataaga-attatttttataaaaatttaaatgtttcgatttccaatgcatt 31513816  T
Q  416 gattaca 422  Q
    |||||||    
T  31513817 gattaca 31513823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 321 - 423
Target Start/End: Original strand, 41543945 - 41544050
Alignment:
Q  321 gggtcttgttaacgagtgctccgga--cactctttaagcatactaaaataagcgattattctttaaaaaagtt-aaacatttcaatttccaatgcattga 417  Q
    ||||||||||||||||| |||| ||  || |||||||||||| |||| || |  |||||||||||||||| || ||| | |||||||||||||||| |||    
T  41543945 gggtcttgttaacgagtactcccgaggcattctttaagcatattaaattaggaaattattctttaaaaaaattcaaatagttcaatttccaatgcaatga 41544044  T
Q  418 ttacat 423  Q
     |||||    
T  41544045 atacat 41544050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 346 - 436
Target Start/End: Original strand, 44195502 - 44195592
Alignment:
Q  346 cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaa 436  Q
    ||||||||||||||  |||| ||||  ||||||||||| |||||||||| | |||||||| ||||||||| | ||||  | ||||||||||    
T  44195502 cactctttaagcattttaaattaagaaattattctttacaaaagttaaataattcaatttacaatgcattaaatacacatgtttttataaa 44195592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 323 - 413
Target Start/End: Complemental strand, 431770 - 431678
Alignment:
Q  323 gtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgca 413  Q
    ||||||||||||||||| ||  ||| |||||||||  || ||| | ||||  ||||||||||||||| ||||||  |||||||||||||||||    
T  431770 gtcttgttaacgagtgcccccaggatactctttaaatattctatattaagtaattattctttaaaaatgttaaaattttcaatttccaatgca 431678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 326 - 420
Target Start/End: Complemental strand, 6334805 - 6334709
Alignment:
Q  326 ttgttaacgagtg--ctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    |||||||||||||  ||| | ||||||||||| ||| ||||| |||   |||||| |||||||| || |||  ||||||||||||||||||||||||    
T  6334805 ttgttaacgagtgtcctcggaacactctttaaacatgctaaattaaaaaattattttttaaaaatgtcaaagttttcaatttccaatgcattgatta 6334709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 422
Target Start/End: Original strand, 8789823 - 8789927
Alignment:
Q  320 agggtcttgttaacgagtgct--ccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    |||||||||||||||||| ||  | |||||||||||||  || |||||| |||  |||||| | ||||||||||||| ||||  |||||  |||||||||    
T  8789823 agggtcttgttaacgagtactttcgggacactctttaaagattctaaaagaagaaattattttataaaaaagttaaatattttgatttctgatgcattga 8789922  T
Q  418 ttaca 422  Q
    |||||    
T  8789923 ttaca 8789927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 411
Target Start/End: Original strand, 18684327 - 18684422
Alignment:
Q  320 agggtcttgttaacgagtgctcc--ggacactcttt--aagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatg 411  Q
    ||||||||||||||||||||||   |||||||||||  |||||| ||||| || |   ||||||||||||||||| | ||| ||||||||||||||    
T  18684327 agggtcttgttaacgagtgctctcgggacactcttttaaagcatgctaaattaggaagttattctttaaaaaagtcatacaattcaatttccaatg 18684422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 364 - 452
Target Start/End: Complemental strand, 35477782 - 35477693
Alignment:
Q  364 aaataagcgattattctttaa-aaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttctacatatag 452  Q
    |||||||| |||||||||||| |||||| ||| ||||| ||||||||  || |||| ||||| ||||||| |||||||| |||| |||||    
T  35477782 aaataagcaattattctttaaaaaaagtcaaatatttcgatttccaagacaatgatgacatgcatttttaaaaatacttactacttatag 35477693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 373 - 489
Target Start/End: Original strand, 10204179 - 10204298
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtattttt-ata--aatactttctacatatagtccttaaaaagtgtccc 469  Q
    ||||||||| |||||| | |||  |||| |||| |||||||||||||||||| |||||| |||  |||| || |||| ||| |||||||||||||||  |    
T  10204179 attattcttcaaaaaattcaaatgtttcgattttcaatgcattgattacatgcatttttcatactaatatttactacttatggtccttaaaaagtgttac 10204278  T
Q  470 gaaggcaatcgttaacattt 489  Q
    | ||||| || |||||||||    
T  10204279 ggaggcactcattaacattt 10204298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 385 - 441
Target Start/End: Original strand, 19495237 - 19495293
Alignment:
Q  385 aaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    |||||| ||| ||||| |||||||||||||||||||||   ||||||||||||||||    
T  19495237 aaaagtcaaatatttcgatttccaatgcattgattacacccatttttataaatactt 19495293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 33963027 - 33962983
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||    
T  33963027 attattctttaaaaaagtttaacacttcaattttcaatgcattga 33962983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 320 - 411
Target Start/End: Complemental strand, 12075659 - 12075568
Alignment:
Q  320 agggtcttgttaacgagtgctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatg 411  Q
    ||||||||||||||||||||   || |||||||||||||||| |||| |||  | ||||   || |||||| ||| ||||||||||||||||    
T  12075659 agggtcttgttaacgagtgccgggggcactctttaagcataccaaaagaagaaactatttcatacaaaagtcaaatatttcaatttccaatg 12075568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 320 - 420
Target Start/End: Complemental strand, 18053156 - 18053054
Alignment:
Q  320 agggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||||||||||||||| |||  |||||||||||||| ||   |||| |||  |||||| | ||||||||| ||| ||||  |||||| |||||||||    
T  18053156 agggtcttgttaacgagtgttcctgggacactctttaaggatttcaaaagaagaaattattttataaaaaagtcaaatattttgatttccgatgcattga 18053057  T
Q  418 tta 420  Q
    |||    
T  18053056 tta 18053054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 375 - 441
Target Start/End: Original strand, 24792013 - 24792080
Alignment:
Q  375 tattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgt-atttttataaatactt 441  Q
    |||||||||||||||| |||  || ||| |||||||||||||||||||| | ||||||||||| ||||    
T  24792013 tattctttaaaaaagtcaaatgttacaaattccaatgcattgattacatataatttttataaaaactt 24792080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 422
Target Start/End: Original strand, 33454964 - 33455039
Alignment:
Q  347 actctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    ||||||||||||| ||||| ||||  | ||||||||||||| || |||  ||||||||| |||| |||||||||||    
T  33454964 actctttaagcatgctaaattaagaaactattctttaaaaatgtcaaagttttcaatttacaatacattgattaca 33455039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 383 - 422
Target Start/End: Complemental strand, 39956381 - 39956342
Alignment:
Q  383 aaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  39956381 aaaaaagttaaacgtttcaatttccaatgcgttgattaca 39956342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 382 - 436
Target Start/End: Original strand, 11278764 - 11278818
Alignment:
Q  382 taaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaa 436  Q
    ||||||||||||| |||||||||| |||||||||  |||||  ||||||||||||    
T  11278764 taaaaaagttaaatatttcaattttcaatgcattagttacacatatttttataaa 11278818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 322 - 433
Target Start/End: Complemental strand, 20683134 - 20683021
Alignment:
Q  322 ggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    |||||||||||||||||| ||  |||||||||||||| || | |||| |||  |  ||| | ||||||| | ||| ||||| |||||| |||||||||||    
T  20683134 ggtcttgttaacgagtgcccccgggacactctttaaggattccaaaagaagaaaagattttataaaaaaatcaaatatttcgatttccgatgcattgatt 20683035  T
Q  420 acatgtatttttat 433  Q
    |||  |||||||||    
T  20683034 acacatatttttat 20683021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 362 - 460
Target Start/End: Complemental strand, 27948108 - 27948007
Alignment:
Q  362 taaaataagcgatta--ttctttaaaaaagttaaacatttcaatttccaatgcattgatt-acatgtatttttataaatactttctacatatagtcctta 458  Q
    |||||||||| ||||  |||||||||||||| |||  |||| |||||||||||||||||| |||   ||||| |||||||||| |||| |||  ||||||    
T  27948108 taaaataagcaattacattctttaaaaaagtcaaatgtttcgatttccaatgcattgattaacacacattttcataaatacttactacttatgatcctta 27948009  T
Q  459 aa 460  Q
    ||    
T  27948008 aa 27948007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 417
Target Start/End: Original strand, 5403581 - 5403614
Alignment:
Q  384 aaaaagttaaacatttcaatttccaatgcattga 417  Q
    |||||||||||||||||||||| |||||||||||    
T  5403581 aaaaagttaaacatttcaattttcaatgcattga 5403614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 383 - 436
Target Start/End: Original strand, 7271812 - 7271865
Alignment:
Q  383 aaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaa 436  Q
    |||||||| ||| ||||  |||||||||||||||||||||| |||||| |||||    
T  7271812 aaaaaagtcaaatatttttatttccaatgcattgattacatatattttcataaa 7271865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 320 - 430
Target Start/End: Complemental strand, 8773812 - 8773700
Alignment:
Q  320 agggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    |||||||||||||||||| |||   || ||||||||||  || |||||| |||  |||||| | ||||||||| ||| ||||  |||||  |||||||||    
T  8773812 agggtcttgttaacgagtactctcggggcactctttaaagattctaaaagaagaaattattttataaaaaagtcaaatattttgatttctgatgcattga 8773713  T
Q  418 ttacatgtatttt 430  Q
    |||||| ||||||    
T  8773712 ttacatatatttt 8773700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 351 - 436
Target Start/End: Complemental strand, 9049256 - 9049171
Alignment:
Q  351 tttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaa 436  Q
    |||||||||  |||| ||||  |||||||||| |||| ||||||  ||||||||| ||||||||| ||||||   |||||||||||    
T  9049256 tttaagcatgttaaattaagtaattattcttttaaaatgttaaatttttcaattttcaatgcattaattacacaaatttttataaa 9049171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 319 - 365
Target Start/End: Complemental strand, 15816844 - 15816796
Alignment:
Q  319 aagggtcttgttaacgagtgctcc--ggacactctttaagcatactaaa 365  Q
    ||||||||||||||||||||| ||  || ||||||||||||||||||||    
T  15816844 aagggtcttgttaacgagtgcccccagggcactctttaagcatactaaa 15816796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 1335030 - 1334926
Alignment:
Q  313 aaaagaaagggtcttgttaacgagtg-ctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaat 410  Q
    |||| ||||||||||||||||||||  ||||||  |||||||||||||| | ||| | |   |||||||||||||||| | ||  ||| |||||||||||    
T  1335030 aaaataaagggtcttgttaacgagtatctccggggcactctttaagcatcccaaatttaataattattctttaaaaaaatcaactattacaatttccaat 1334931  T
Q  411 gcatt 415  Q
    |||||    
T  1334930 gcatt 1334926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 373 - 441
Target Start/End: Complemental strand, 8333658 - 8333590
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    |||||||||||| ||||| |||||||||||||  |||||||| || ||||   ||||||||||| ||||    
T  8333658 attattctttaataaagtcaaacatttcaattctcaatgcatcgaatacacaaatttttataaaaactt 8333590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 323 - 422
Target Start/End: Complemental strand, 12848607 - 12848507
Alignment:
Q  323 gtcttgttaacgagtgctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattac 421  Q
    ||||||||||| |||| |||||  ||||||||||||||| |||| ||||  | |||||||||| || || |||  |||||||||||| |||| | |||||    
T  12848607 gtcttgttaacaagtgttccggggcactctttaagcatattaaattaagtaactattctttaataatgtcaaagttttcaatttccattgcactaattac 12848508  T
Q  422 a 422  Q
    |    
T  12848507 a 12848507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 346 - 422
Target Start/End: Complemental strand, 24389734 - 24389658
Alignment:
Q  346 cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    |||||||||||||| ||||| ||||  |||||||||| || | || |||  ||||||||||||||||  ||||||||    
T  24389734 cactctttaagcatgctaaattaagtaattattcttttaagatgtcaaagttttcaatttccaatgcgctgattaca 24389658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 373 - 441
Target Start/End: Complemental strand, 44330713 - 44330645
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    |||||| ||||||||||| ||| | | |||||||||||||||||||| |||  ||||| ||||| ||||    
T  44330713 attattatttaaaaaagtcaaaaactccaatttccaatgcattgatttcataaattttgataaaaactt 44330645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 373 - 441
Target Start/End: Complemental strand, 44365487 - 44365419
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    |||||| ||||||||||| ||| | | |||||||||||||||||||| |||  ||||| ||||| ||||    
T  44365487 attattatttaaaaaagtcaaaaactccaatttccaatgcattgatttcataaattttgataaaaactt 44365419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 2e-35; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 319 - 488
Target Start/End: Complemental strand, 34032230 - 34032059
Alignment:
Q  319 aagggtcttgttaacgagtg--ctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattg 416  Q
    ||||||||||||||||||||  ||  || |||||||||||||| ||||||||||  |||||||||||||||||||||| ||||||||||| || ||| ||    
T  34032230 aagggtcttgttaacgagtgtccttggggcactctttaagcattctaaaataagtaattattctttaaaaaagttaaatatttcaatttcaaaggcaatg 34032131  T
Q  417 attacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacatt 488  Q
    |||||||| ||||||| |||||||| |||| ||| |  |||||| |||| ||||||| || |||||||||||    
T  34032130 attacatgcatttttaaaaatacttactacttatgggtcttaaagagtgccccgaagacactcgttaacatt 34032059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 321 - 430
Target Start/End: Original strand, 967071 - 967181
Alignment:
Q  321 gggtcttgttaacgagtg-ctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    |||||||||||||||||| |||||   ||||||||||||||| ||| || |  |||||||||||||||| | ||| | |||||||||||||||||||| |    
T  967071 gggtcttgttaacgagtgtctccgcgtactctttaagcataccaaattaggatattattctttaaaaaattcaaatagttcaatttccaatgcattgaat 967170  T
Q  420 acatgtatttt 430  Q
    ||||| |||||    
T  967171 acatgaatttt 967181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 319 - 489
Target Start/End: Complemental strand, 25416004 - 25415832
Alignment:
Q  319 aagggtcttgttaacgagtgct-ccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattg 416  Q
    |||||||||||||||||||||| ||||  |||||||||| |||  |||||| ||  ||||| |||||||||||| ||| ||||| |||||  ||  ||||    
T  25416004 aagggtcttgttaacgagtgctaccggcgcactctttaaacattttaaaattagtaattatactttaaaaaagtcaaatatttcgatttctgattaattg 25415905  T
Q  417 attacatgtatttttataaatactttctacatatagtccttaaaaagtgtcccgaaggcaatcgttaacattt 489  Q
    |||| ||  |||| ||||||||||| ||||  ||  |||||||| ||| |||||||| || ||||||||||||    
T  25415904 attagatacatttctataaatacttactactcatgatccttaaagagtatcccgaagccactcgttaacattt 25415832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 326 - 421
Target Start/End: Complemental strand, 32017550 - 32017454
Alignment:
Q  326 ttgttaacgagtgctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattac 421  Q
    |||||||||||| | ||||  |||||||||| ||||  |||| |||| |||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  32017550 ttgttaacgagtaccccggggcactctttaaacatatcaaaacaagcaattattctttaaaaaagtaaaatatttcaattttcaatgcattgattac 32017454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 320 - 411
Target Start/End: Complemental strand, 25438014 - 25437920
Alignment:
Q  320 agggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaa-aaaagttaaacatttcaatttccaatg 411  Q
    |||||||||||||||||||| ||  ||||||||||||||||| ||||| ||||   ||||||||||| |||||| ||||| ||||||||||||||    
T  25438014 agggtcttgttaacgagtgcccccgggacactctttaagcatgctaaattaagaagttattctttaaaaaaagtgaaacagttcaatttccaatg 25437920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 141842 - 141911
Alignment:
Q  321 gggtcttgttaacgagtgctccggacactctttaagcatactaaaataagcgattattctttaaaaaagt 390  Q
    |||| |||||||||||||| || |||||||||||||||||| ||||||| | |||||||||| |||||||    
T  141842 gggttttgttaacgagtgccccagacactctttaagcataccaaaataaacaattattcttttaaaaagt 141911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 324 - 423
Target Start/End: Original strand, 8761898 - 8761999
Alignment:
Q  324 tcttgttaacgagtg-ctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattac 421  Q
    ||||||||| ||||| ||||||| ||||||||||| || |||||| |||  |||||||| ||||||||||||| |||||||||| ||||| |||||| ||    
T  8761898 tcttgttaatgagtgtctccggatcactctttaaggattctaaaaaaagaaattattctataaaaaagttaaatatttcaattttcaatgtattgatgac 8761997  T
Q  422 at 423  Q
    ||    
T  8761998 at 8761999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 373 - 441
Target Start/End: Complemental strand, 27833374 - 27833306
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    ||||||||||| |||||| ||| ||||| |||| |||||||||||||||||| ||||| ||||||||||    
T  27833374 attattctttacaaaagtcaaatatttcgatttacaatgcattgattacatgcattttcataaatactt 27833306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 351 - 422
Target Start/End: Original strand, 26663635 - 26663706
Alignment:
Q  351 tttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    ||||||||| ||||||||||  |||||| ||||||||||| ||| ||||| |||||||||| ||||||||||    
T  26663635 tttaagcattctaaaataagaaattattttttaaaaaagtcaaatatttcgatttccaatgtattgattaca 26663706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 351 - 422
Target Start/End: Original strand, 26935230 - 26935301
Alignment:
Q  351 tttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    ||||||||| ||||||||||  |||||| ||||||||||| ||| ||||| |||||||||| ||||||||||    
T  26935230 tttaagcattctaaaataagaaattattttttaaaaaagtcaaatatttcgatttccaatgtattgattaca 26935301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 346 - 423
Target Start/End: Original strand, 27016666 - 27016743
Alignment:
Q  346 cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacat 423  Q
    |||||||||||||| | |||| |||  |||||||  ||||||||| ||| ||||||||||||||||||| ||||||||    
T  27016666 cactctttaagcattccaaaagaagaaattattccataaaaaagtcaaaaatttcaatttccaatgcatcgattacat 27016743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 431
Target Start/End: Original strand, 2816147 - 2816258
Alignment:
Q  322 ggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    ||||||||||||||||||| |  ||  |||||||||||||   |||| |||| |||||||||||||||| | ||| |||||||||| |||  || |||||    
T  2816147 ggtcttgttaacgagtgctaccggggtactctttaagcatttcaaaagaagcaattattctttaaaaaaatcaaatatttcaattttcaagacaatgatt 2816246  T
Q  420 acatgtattttt 431  Q
    ||||| ||||||    
T  2816247 acatgcattttt 2816258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 345 - 417
Target Start/End: Original strand, 3758194 - 3758266
Alignment:
Q  345 acactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||||||| |||  |||||||| | |||||||||||||||||| ||| ||||| |||| |||||||||||    
T  3758194 acactctttaaacattttaaaataatcaattattctttaaaaaagtcaaatatttcgattttcaatgcattga 3758266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 318 - 422
Target Start/End: Original strand, 779051 - 779156
Alignment:
Q  318 aaagggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    |||| ||||||||||||||||| ||  || |||||||||| ||| | ||||| ||  |||||| ||||||| |||||||  |||| ||||||||||||||    
T  779051 aaagagtcttgttaacgagtgccccctgggcactctttaaacattcaaaaattagtaattattttttaaaa-agttaaatgtttcgatttccaatgcatt 779149  T
Q  416 gattaca 422  Q
    |||||||    
T  779150 gattaca 779156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 392 - 431
Target Start/End: Complemental strand, 42338072 - 42338033
Alignment:
Q  392 aaacatttcaatttccaatgcattgattacatgtattttt 431  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  42338072 aaacatttcgatttccaatgcattgattacatgtattttt 42338033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 438
Target Start/End: Complemental strand, 17098323 - 17098205
Alignment:
Q  322 ggtcttgttaacgagtg-ctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    ||||||||||||||||| | ||||  |||||||||| |||   ||||||||| |||||| ||||||||||| ||| ||||| ||||||||  || |||||    
T  17098323 ggtcttgttaacgagtgtcgccggggcactctttaaacatcacaaaataagcaattattatttaaaaaagtcaaatatttcgatttccaagacaatgatt 17098224  T
Q  420 acatgtatttttataaata 438  Q
    ||||  ||||||| |||||    
T  17098223 acattcatttttaaaaata 17098205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 344 - 390
Target Start/End: Original strand, 36160312 - 36160358
Alignment:
Q  344 gacactctttaagcatactaaaataagcgattattctttaaaaaagt 390  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||||    
T  36160312 gacactctttaagcattctaaaataagcaattattttttaaaaaagt 36160358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 319 - 422
Target Start/End: Original strand, 41583509 - 41583614
Alignment:
Q  319 aagggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattg 416  Q
    ||||||||||||||||||||| ||  || ||||||||||| || | ||| | ||  ||||||| || ||||||||||| ||| ||| |||||||||||||    
T  41583509 aagggtcttgttaacgagtgcccccgggtcactctttaaggatcccaaatttagaaattattccttcaaaaagttaaatattacaaattccaatgcattg 41583608  T
Q  417 attaca 422  Q
    | ||||    
T  41583609 aataca 41583614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 42265458 - 42265504
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||||    
T  42265458 attattctttaaaaaagtcaaaaatttcaattttcaatgcattgatt 42265504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 441
Target Start/End: Complemental strand, 10145453 - 10145356
Alignment:
Q  344 gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    ||||||||||||||| || |||||||   | |||||||||||||||| ||| ||||  ||||  |||||||| ||||||   ||||||||||||||||    
T  10145453 gacactctttaagcacaccaaaataaataaatattctttaaaaaagtaaaatattttgattttgaatgcattaattacacacatttttataaatactt 10145356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 373 - 441
Target Start/End: Original strand, 22873493 - 22873562
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtattt-ttataaatactt 441  Q
    |||||||||||||||||||||| |||| |||||  |||||||||| |||| |||||| | ||||||||||    
T  22873493 attattctttaaaaaagttaaatattttaatttttaatgcattgaatacacgtatttataataaatactt 22873562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 344 - 420
Target Start/End: Original strand, 4695065 - 4695141
Alignment:
Q  344 gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    |||||||||||||||| ||||| |||   |||||||||||||||  |||||  ||| ||||||||||||| ||||||    
T  4695065 gacactctttaagcatgctaaattaaaaaattattctttaaaaatattaaagtttttaatttccaatgcactgatta 4695141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 422
Target Start/End: Original strand, 7210896 - 7211000
Alignment:
Q  319 aagggtcttgttaacgagtgctccg-gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||||||||||| ||| ||||  |||||| |||||| || ||||| | |   ||||||| |||||||||||||||| ||||| |||||||| |||||    
T  7210896 aagggtcttgttaacaagtcctcccagacactttttaagtatcctaaatttaaaaattattcgttaaaaaagttaaacacttcaaattccaatgtattga 7210995  T
Q  418 ttaca 422  Q
     ||||    
T  7210996 ataca 7211000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 362 - 422
Target Start/End: Original strand, 12448682 - 12448742
Alignment:
Q  362 taaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    |||||||||  |||||||  ||||||||||||| |||||||||| ||||||| ||||||||    
T  12448682 taaaataagaaattattcaataaaaaagttaaatatttcaattttcaatgcaatgattaca 12448742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 419
Target Start/End: Original strand, 41520690 - 41520733
Alignment:
Q  376 attctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    ||||||||||||||||||| | | ||||||||||||||||||||    
T  41520690 attctttaaaaaagttaaaaactccaatttccaatgcattgatt 41520733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 591308 - 591262
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    ||||||||||||||||||  || | ||||||||||||||||||||||    
T  591308 attattctttaaaaaagtcgaaaacttcaatttccaatgcattgatt 591262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 307 - 370
Target Start/End: Original strand, 2977726 - 2977791
Alignment:
Q  307 cactaaaaaagaaagggtcttgttaacgagtgctccgg--acactctttaagcatactaaaataag 370  Q
    |||||||||| |||||||||||||||||||||  || |  ||||| ||||||||| ||||||||||    
T  2977726 cactaaaaaataaagggtcttgttaacgagtgtccctgaaacactttttaagcattctaaaataag 2977791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 321 - 420
Target Start/End: Original strand, 8247035 - 8247136
Alignment:
Q  321 gggtcttgttaacgagtgctccgg--acactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgat 418  Q
    ||||||||||||||||||| || |  |||||||||||| || | |||| |||  || ||| | ||||||||| ||| ||||| |||||| ||||||||||    
T  8247035 gggtcttgttaacgagtgcccccgtgacactctttaaggattccaaaagaagaaataattttataaaaaagtcaaatatttcgatttccgatgcattgat 8247134  T
Q  419 ta 420  Q
    ||    
T  8247135 ta 8247136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 8415712 - 8415758
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    ||||||||||||||| |||||| | ||||||||||||| ||||||||    
T  8415712 attattctttaaaaaggttaaaaacttcaatttccaatacattgatt 8415758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 374 - 436
Target Start/End: Original strand, 11844267 - 11844328
Alignment:
Q  374 ttattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaa 436  Q
    ||||||||||||| ||||||| |||| |||||||||| ||||||||| ||| ||||| |||||    
T  11844267 ttattctttaaaa-agttaaatattttaatttccaatacattgattatatgcattttcataaa 11844328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 419
Target Start/End: Complemental strand, 13978708 - 13978670
Alignment:
Q  381 ttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  13978708 ttaaaaaagttaaaaacttcaatttccaatgcattgatt 13978670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 27146894 - 27146940
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    |||||||||||||||||||||| | |  |||||||||||||||||||    
T  27146894 attattctttaaaaaagttaaaaactctaatttccaatgcattgatt 27146940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 40872262 - 40872308
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgatt 419  Q
    ||||||||||||||| |||||| | | ||||||||||||||||||||    
T  40872262 attattctttaaaaaggttaaaaactccaatttccaatgcattgatt 40872308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Original strand, 14042459 - 14042532
Alignment:
Q  347 actctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgatta 420  Q
    |||||||||  || |||||||||   |||||| ||||||||||| ||| ||||  |||||||||||||||||||    
T  14042459 actctttaaagattctaaaataataaattattatttaaaaaagtcaaatattttgatttccaatgcattgatta 14042532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 14309195 - 14309122
Alignment:
Q  349 tctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    |||||||||||| |||| ||||   ||||||||||||||  | |||  ||||||||||||||||||| ||||||    
T  14309195 tctttaagcatattaaattaagtagttattctttaaaaatatcaaagttttcaatttccaatgcattaattaca 14309122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 323 - 415
Target Start/End: Complemental strand, 24041158 - 24041065
Alignment:
Q  323 gtcttgttaacgagtgctcc-ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    |||||||||||||||||||| ||  ||||||||||||||  ||| || |  |||||||||||||||| | ||| | || |||||||||| ||||    
T  24041158 gtcttgttaacgagtgctccggggtactctttaagcatatcaaattatgaaattattctttaaaaaattcaaatagtttaatttccaatacatt 24041065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 319 - 385
Target Start/End: Original strand, 29342302 - 29342370
Alignment:
Q  319 aagggtcttgttaacgagtgctccgg--acactctttaagcatactaaaataagcgattattctttaaa 385  Q
    ||||||||||||||||||||| ||||  ||||||||||||||| | ||||  ||  |||||||||||||    
T  29342302 aagggtcttgttaacgagtgccccgggaacactctttaagcattccaaaaggagaaattattctttaaa 29342370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 383 - 436
Target Start/End: Original strand, 31889648 - 31889701
Alignment:
Q  383 aaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaa 436  Q
    |||||||| ||| ||||||||||| |||||||||||||||  |||||| |||||    
T  31889648 aaaaaagtaaaatatttcaatttctaatgcattgattacacatattttcataaa 31889701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 362 - 441
Target Start/End: Original strand, 39099880 - 39099961
Alignment:
Q  362 taaaataagcgattattc-tttaaaaaagtt-aaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    |||||||| | ||||||| |||||||||||| ||| ||||| |||| |||||||| || ||||  |||||||||||||||||    
T  39099880 taaaataaacaattattcctttaaaaaagttcaaatatttcgattttcaatgcatcgaatacacatatttttataaatactt 39099961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 2112512 - 2112552
Alignment:
Q  320 agggtcttgttaacgagtgctc-cggacactctttaagcat 359  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  2112512 agggtcttgttaacgagtgccctcggacactctttaagcat 2112552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 320 - 406
Target Start/End: Complemental strand, 27650947 - 27650859
Alignment:
Q  320 agggtcttgttaacgagtgc-tccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttc 406  Q
    |||||||||||||||||| | |||||| |||||||||| ||| | |||| |||  |||||| | ||||||||||||| |||| ||||||    
T  27650947 agggtcttgttaacgagtacctccggaacactctttaaacattccaaaaaaagaaattattatataaaaaagttaaatattttaatttc 27650859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 30501277 - 30501182
Alignment:
Q  322 ggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    |||||||||||||||||| ||  || |||||||||||||| | ||| | ||  |||||||||| ||||||| ||  ||| ||||||||||| ||||    
T  30501277 ggtcttgttaacgagtgcccccagggcactctttaagcatcccaaatttagtaattattcttttaaaaagtcaattattacaatttccaatacatt 30501182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 30541620 - 30541525
Alignment:
Q  322 ggtcttgttaacgagtgctcc--ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcatt 415  Q
    |||||||||||||||||| ||  || |||||||||||||| | ||| | ||  |||||||||| ||||||| ||  ||| ||||||||||| ||||    
T  30541620 ggtcttgttaacgagtgcccccagggcactctttaagcatcccaaatttagtaattattcttttaaaaagtcaattattacaatttccaatacatt 30541525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 345 - 405
Target Start/End: Original strand, 31914164 - 31914223
Alignment:
Q  345 acactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaattt 405  Q
    ||||||||||||||| ||||| ||||  |||||||||| ||||||| |||||||| |||||    
T  31914164 acactctttaagcattctaaattaagtaattattcttt-aaaaagtcaaacattttaattt 31914223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 373 - 441
Target Start/End: Complemental strand, 34729176 - 34729110
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    |||||||||||||||| ||||||||||  |||||| ||||||||| ||||| |||||| ||||| ||||    
T  34729176 attattctttaaaaaaattaaacattt-tatttcc-atgcattgaatacatttattttcataaaaactt 34729110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 330 - 446
Target Start/End: Original strand, 36243381 - 36243495
Alignment:
Q  330 taacgagtgctccggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtattt 429  Q
    ||||||||||||  ||||||||||||| ||  ||||||||   |||||| ||||||||| | ||| ||||  ||||  ||||||||||||||||| ||||    
T  36243381 taacgagtgctcgagacactctttaagtatt-taaaataaataattattatttaaaaaa-tcaaatattttgatttttaatgcattgattacatgcattt 36243478  T
Q  430 ttataaatactttctac 446  Q
    | ||||| |||| ||||    
T  36243479 tcataaacacttactac 36243495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 349 - 413
Target Start/End: Complemental strand, 41568775 - 41568711
Alignment:
Q  349 tctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgca 413  Q
    ||||||||||||||||| ||||  ||||||||| ||||| || |||  ||||||||| |||||||    
T  41568775 tctttaagcatactaaattaagttattattcttcaaaaatgtcaaagttttcaattttcaatgca 41568711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 345 - 441
Target Start/End: Original strand, 189063 - 189159
Alignment:
Q  345 acactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactt 441  Q
    |||||||||||||||  |||||||||| |||||||||||||||||||||| ||||| ||||| ||| |||| ||||||  |||||| ||||||||||    
T  189063 acactctttaagcattttaaaataagcaattattctttaaaaaagttaaatatttctatttctaatacattaattacacatattttcataaatactt 189159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1681 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold1681
Description:

Target: scaffold1681; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 644 - 725
Alignment:
Q  319 aagggtcttgttaacgagtgctccg-gacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacattt 399  Q
    |||||| |||||||||||||||||  |||||||||||||||| ||||||||||  |||| | |||||||| |||||| ||||    
T  644 aagggttttgttaacgagtgctcccagacactctttaagcattctaaaataagtaattagtgtttaaaaaggttaaatattt 725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 343 - 436
Target Start/End: Original strand, 219182 - 219275
Alignment:
Q  343 ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaa 436  Q
    ||||| |||||||||||  |||| || |  ||||||||||| |||||| ||| | |||||||||||||||||| | ||||| ||||||||||||    
T  219182 ggacattctttaagcattttaaattaggaaattattctttacaaaagtcaaatagttcaatttccaatgcattaaatacatatatttttataaa 219275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 11918 - 11842
Alignment:
Q  116 tcttggacttagagaattctgtggtattagcttcctccttgcctgtcgaaacacatgctcaaaaatacaagctaaca 192  Q
    ||||||| |||||||||| ||| || || ||||||||||| | ||||||||||||| |||||||||||  |||||||    
T  11918 tcttggagttagagaattatgtagtcttggcttcctccttccttgtcgaaacacatactcaaaaataccggctaaca 11842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 5088 - 5044
Alignment:
Q  373 attattctttaaaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||||    
T  5088 attattccttaaaaaagtttaacatttcaatttcccatgcattga 5044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 323 - 421
Target Start/End: Original strand, 13910 - 14007
Alignment:
Q  323 gtcttgttaacgagtgctccgga-cactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattac 421  Q
    ||||||||||||||||| || || |||||||||||||  ||||||||||  ||||||| ||   ||||||||| |||||||||| ||||  |||||||||    
T  13910 gtcttgttaacgagtgcccccgaacactctttaagcaatctaaaataagtaattattcatt--taaagttaaatatttcaattttcaatatattgattac 14007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 324 - 422
Target Start/End: Original strand, 26673 - 26772
Alignment:
Q  324 tcttgttaacgagtgctcc-ggacactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 422  Q
    |||| ||||| |||||||| || |||||||||||||| ||||| ||||  |||||| ||| |||| || |||  ||||||||| ||||||| ||||||||    
T  26673 tcttattaacaagtgctcccgggcactctttaagcatgctaaattaagtaattattattttaaaatgtcaaagttttcaattttcaatgcactgattaca 26772  T

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Target: scaffold0182 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 417
Target Start/End: Original strand, 20184 - 20217
Alignment:
Q  384 aaaaagttaaacatttcaatttccaatgcattga 417  Q
    ||||||||||||||||||||||| ||||||||||    
T  20184 aaaaagttaaacatttcaatttcaaatgcattga 20217  T

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Target: scaffold0291 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 345 - 457
Target Start/End: Complemental strand, 11776 - 11664
Alignment:
Q  345 acactctttaagcatactaaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaatactttct 444  Q
    |||||||||||||||   ||||||||| |||| | |||| |||||| |||  |||| ||||| ||||| |||||||||  | |||| ||||||| || ||    
T  11776 acactctttaagcatttcaaaataagcaattaatttttagaaaagtcaaatgtttcgatttcaaatgctttgattacacattttttcataaatagttact 11677  T
Q  445 acatatagtcctt 457  Q
    || |||| |||||    
T  11676 acttataatcctt 11664  T

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Target: scaffold0111 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 362 - 438
Target Start/End: Original strand, 38916 - 38992
Alignment:
Q  362 taaaataagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattacatgtatttttataaata 438  Q
    |||||||||  |||||  |||||||| ||||||||| |  ||||| ||  |||||||| ||||||||||||||||||    
T  38916 taaaataagtaattatcttttaaaaatgttaaacatgttgatttctaagacattgattgcatgtatttttataaata 38992  T

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