View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15932_high_22 (Length: 463)
Name: NF15932_high_22
Description: NF15932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15932_high_22 |
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Alignment Details
Target: chr8 (Bit Score: 343; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 16 - 448
Target Start/End: Original strand, 2264339 - 2264772
Alignment:
| Q |
16 |
ttttgaatatcttatttctaccggtatgtaacatataaactcgtttgtggtagctaaatatatattatcgagggatcgaataaaattatattttgggtta |
115 |
Q |
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| T |
2264339 |
ttttgaatatcttatttctaccggtatgtaacagataaactcgtttgtggtagctaaatatatattatcgagggatcgaataaaattatattttgggtta |
2264438 |
T |
|
| Q |
116 |
accaaagttactccatcgttacacataacttcaccattgcatatgagtcataaaggagcgctcgttgtcgaaactcgtaagtatctttaataagagatga |
215 |
Q |
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| T |
2264439 |
accaaagttactccatcgttacacataacttcaccattgcatatgagtcataaaggaacgctcgttgtcgaaactcgtaagtatctttaataagagatga |
2264538 |
T |
|
| Q |
216 |
atgtaagtattttttatacgttgctcgtaagtatctttagtgagaaataaatgtaaatatattttatactctaaag-nnnnnnnnngccttgagctgggg |
314 |
Q |
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| T |
2264539 |
atgtaagtattttttatacgttactcgtaagtatctttagtgaaaaataaatgtaaatgtattttatactctaaagttttttttttgcgttgagctgggg |
2264638 |
T |
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| Q |
315 |
gcaacaatattctctcacccacaannnnnnnngagaaaataaataaaattaataaacacagatatttttcttataattgaatcaggtgcaattaaaatag |
414 |
Q |
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| T |
2264639 |
gcaacaatattctctcacccacaattttttttgagaaaataaataaaataaataaacacagatatttttcttataattgaatcaggtgcaattaaaatag |
2264738 |
T |
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| Q |
415 |
caacatattcaaagctgtggccaaacattagtat |
448 |
Q |
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| T |
2264739 |
caacatattcaatgctgtggccaaacattagtat |
2264772 |
T |
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