View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15932_high_61 (Length: 311)
Name: NF15932_high_61
Description: NF15932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15932_high_61 |
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Alignment Details
Target: chr2 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 13 - 292
Target Start/End: Original strand, 12922710 - 12922991
Alignment:
| Q |
13 |
agcaaaggaacagaaacaatcagttaaagtagatagacaccctacttatgtctcccagttctaaaacccaaacataacatagtagtgtcctaaaataaat |
112 |
Q |
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| T |
12922710 |
agcaaaggaacagaaacaatcagttaaagtagatagacaccctacttatgtctcccagttcttaaacccaaacataacatagtagtgtcctaaaataaat |
12922809 |
T |
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| Q |
113 |
tttgctgatacattatattttgctttaagtaaagctaattctgaatgtcctatttccacatgcatttgaattaaaaagtacattcatgtgctagtggcaa |
212 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
12922810 |
tttgctgataccttatattttgctttaagtaaagctaattctgaatgtcatatttccacatgcatttgaattaaaaagtacattcatgtactagtggcag |
12922909 |
T |
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| Q |
213 |
gccttgtctaactccctgaagttacaagttttaccagcagggtgaacaagtgaaaaa--agagtcattttccaaatactggt |
292 |
Q |
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| T |
12922910 |
gccttgtctaactccctgaagttacaagttttaccagcagggtgaacaagtgaaaaaagagagtcattttccaaatactggt |
12922991 |
T |
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