View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15932_high_81 (Length: 278)

Name: NF15932_high_81
Description: NF15932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15932_high_81
NF15932_high_81
[»] chr2 (25 HSPs)
chr2 (1-260)||(43168981-43169242)
chr2 (141-260)||(43219019-43219138)
chr2 (1-109)||(43195675-43195784)
chr2 (1-109)||(3976259-3976368)
chr2 (1-109)||(3977107-3977216)
chr2 (1-109)||(7877735-7877844)
chr2 (1-109)||(21213989-21214098)
chr2 (1-109)||(21214305-21214414)
chr2 (1-109)||(3976575-3976683)
chr2 (1-112)||(6183470-6183589)
chr2 (1-109)||(17509000-17509109)
chr2 (1-109)||(23054217-23054326)
chr2 (1-101)||(18901968-18902069)
chr2 (4-109)||(42768439-42768545)
chr2 (9-109)||(25441587-25441688)
chr2 (1-109)||(30166183-30166292)
chr2 (5-109)||(5424864-5424969)
chr2 (10-112)||(11968942-11969045)
chr2 (1-93)||(15820205-15820298)
chr2 (37-109)||(3976827-3976900)
chr2 (1-109)||(43688526-43688635)
chr2 (7-109)||(10849601-10849704)
chr2 (12-48)||(18183419-18183455)
chr2 (2-39)||(3004012-3004049)
chr2 (14-47)||(11339813-11339846)
[»] chr5 (20 HSPs)
chr5 (1-110)||(13843587-13843697)
chr5 (1-109)||(13843904-13844013)
chr5 (1-109)||(27760282-27760391)
chr5 (1-109)||(1028197-1028305)
chr5 (1-103)||(20811351-20811454)
chr5 (1-103)||(20837706-20837809)
chr5 (1-109)||(17016197-17016304)
chr5 (1-108)||(27759967-27760075)
chr5 (1-112)||(37995738-37995850)
chr5 (1-109)||(873800-873908)
chr5 (1-109)||(24993963-24994072)
chr5 (1-109)||(28010220-28010329)
chr5 (1-109)||(24918055-24918164)
chr5 (3-110)||(38131657-38131762)
chr5 (33-109)||(12595239-12595316)
chr5 (3-109)||(28009903-28010010)
chr5 (12-48)||(4796311-4796347)
chr5 (2-109)||(17435343-17435451)
chr5 (12-48)||(31973549-31973585)
chr5 (77-111)||(30588226-30588260)
[»] chr4 (33 HSPs)
chr4 (1-109)||(50857903-50858012)
chr4 (1-109)||(50858219-50858328)
chr4 (1-109)||(53740073-53740182)
chr4 (1-110)||(52214505-52214615)
chr4 (1-109)||(990930-991038)
chr4 (1-109)||(45427356-45427465)
chr4 (1-110)||(29734451-29734561)
chr4 (1-109)||(45427040-45427149)
chr4 (15-109)||(53739748-53739843)
chr4 (1-109)||(15665043-15665153)
chr4 (2-109)||(29669467-29669575)
chr4 (2-109)||(29669782-29669890)
chr4 (4-109)||(32988377-32988483)
chr4 (21-109)||(990732-990821)
chr4 (1-109)||(23018361-23018470)
chr4 (1-109)||(53738312-53738421)
chr4 (1-109)||(43972246-43972355)
chr4 (3-109)||(49544226-49544331)
chr4 (1-66)||(991139-991204)
chr4 (1-104)||(56509504-56509609)
chr4 (1-72)||(990476-990547)
chr4 (1-115)||(43971924-43972039)
chr4 (21-112)||(51469374-51469466)
chr4 (44-109)||(17222783-17222849)
chr4 (1-110)||(48843121-48843231)
chr4 (1-109)||(36558570-36558679)
chr4 (1-109)||(22866975-22867084)
chr4 (19-109)||(18862548-18862642)
chr4 (12-48)||(44898837-44898873)
chr4 (8-48)||(51470435-51470475)
chr4 (12-48)||(3137748-3137784)
chr4 (12-48)||(30491066-30491102)
chr4 (1-41)||(42788090-42788130)
[»] chr3 (26 HSPs)
chr3 (1-109)||(44573846-44573955)
chr3 (1-112)||(45443168-45443280)
chr3 (1-109)||(54368930-54369039)
chr3 (1-109)||(27219220-27219329)
chr3 (1-109)||(44573217-44573326)
chr3 (1-109)||(4255401-4255510)
chr3 (1-109)||(13769395-13769504)
chr3 (1-109)||(41380615-41380724)
chr3 (1-109)||(44573533-44573639)
chr3 (1-109)||(4256125-4256234)
chr3 (1-109)||(43101475-43101584)
chr3 (1-109)||(34715559-34715668)
chr3 (1-109)||(48685422-48685531)
chr3 (1-109)||(24860164-24860273)
chr3 (1-89)||(50203961-50204050)
chr3 (2-75)||(47833766-47833839)
chr3 (1-111)||(46139122-46139232)
chr3 (2-110)||(14170104-14170213)
chr3 (19-107)||(9658193-9658282)
chr3 (1-109)||(662619-662726)
chr3 (1-109)||(34250456-34250564)
chr3 (1-58)||(3985716-3985773)
chr3 (63-109)||(4255761-4255808)
chr3 (63-109)||(4255943-4255990)
chr3 (44-109)||(3985618-3985684)
chr3 (1-47)||(31603931-31603977)
[»] chr8 (18 HSPs)
chr8 (1-109)||(21653217-21653326)
chr8 (1-109)||(36997057-36997166)
chr8 (1-104)||(21653700-21653803)
chr8 (1-109)||(18905747-18905856)
chr8 (1-109)||(3184007-3184116)
chr8 (18-109)||(32931297-32931389)
chr8 (1-111)||(31766890-31767001)
chr8 (1-109)||(20298620-20298729)
chr8 (1-109)||(21085252-21085361)
chr8 (1-111)||(40754333-40754444)
chr8 (1-109)||(23027932-23028041)
chr8 (1-109)||(23027609-23027718)
chr8 (1-109)||(22277415-22277524)
chr8 (12-109)||(38886993-38887090)
chr8 (1-48)||(44933185-44933232)
chr8 (18-48)||(21653547-21653577)
chr8 (14-48)||(30590401-30590435)
chr8 (12-48)||(39590651-39590687)
[»] chr7 (23 HSPs)
chr7 (1-109)||(257371-257480)
chr7 (1-109)||(40121722-40121831)
chr7 (1-109)||(43167997-43168106)
chr7 (14-109)||(40122043-40122139)
chr7 (1-109)||(41670759-41670868)
chr7 (2-109)||(1663709-1663817)
chr7 (1-109)||(1661295-1661404)
chr7 (1-109)||(28909923-28910032)
chr7 (1-109)||(7135347-7135456)
chr7 (2-109)||(41670475-41670583)
chr7 (6-109)||(30296520-30296624)
chr7 (17-107)||(29780352-29780443)
chr7 (1-109)||(3973052-3973160)
chr7 (1-42)||(41709977-41710018)
chr7 (5-47)||(29780101-29780143)
chr7 (2-48)||(32000770-32000816)
chr7 (13-109)||(10193492-10193588)
chr7 (4-48)||(10406693-10406737)
chr7 (12-48)||(14092016-14092052)
chr7 (12-48)||(14402034-14402070)
chr7 (12-48)||(30610921-30610957)
chr7 (12-109)||(23721035-23721132)
chr7 (77-106)||(8584999-8585028)
[»] chr1 (20 HSPs)
chr1 (1-109)||(31305602-31305711)
chr1 (3-109)||(35926327-35926434)
chr1 (4-109)||(8520342-8520448)
chr1 (1-109)||(20735413-20735522)
chr1 (1-109)||(17419678-17419787)
chr1 (1-109)||(19937147-19937256)
chr1 (1-109)||(15013416-15013525)
chr1 (5-109)||(33879886-33879991)
chr1 (5-109)||(33964264-33964369)
chr1 (1-109)||(45264554-45264663)
chr1 (1-95)||(8520197-8520292)
chr1 (1-111)||(4022229-4022340)
chr1 (1-109)||(2697435-2697544)
chr1 (1-48)||(43423232-43423279)
chr1 (1-109)||(19459615-19459723)
chr1 (15-109)||(41590346-41590439)
chr1 (12-48)||(14623160-14623196)
chr1 (12-48)||(34626889-34626925)
chr1 (77-109)||(37600788-37600820)
chr1 (12-48)||(51515667-51515703)
[»] chr6 (22 HSPs)
chr6 (1-109)||(1408902-1409011)
chr6 (1-109)||(24055213-24055322)
chr6 (1-109)||(1744946-1745055)
chr6 (1-109)||(10418442-10418551)
chr6 (1-109)||(10733542-10733651)
chr6 (1-109)||(21067161-21067270)
chr6 (1-110)||(19054383-19054493)
chr6 (1-109)||(19753708-19753817)
chr6 (1-109)||(21088952-21089061)
chr6 (1-107)||(21043885-21043992)
chr6 (2-107)||(22911279-22911385)
chr6 (2-109)||(8143909-8144017)
chr6 (2-107)||(22889673-22889779)
chr6 (1-109)||(12134587-12134696)
chr6 (1-109)||(30539126-30539235)
chr6 (2-109)||(22874948-22875056)
chr6 (2-107)||(17096803-17096910)
chr6 (1-104)||(28068523-28068626)
chr6 (5-110)||(32215798-32215904)
chr6 (1-109)||(31977-32084)
chr6 (14-109)||(1205981-1206076)
chr6 (12-110)||(9602102-9602200)
[»] scaffold0054 (1 HSPs)
scaffold0054 (2-107)||(11132-11238)
[»] scaffold0099 (1 HSPs)
scaffold0099 (1-109)||(30582-30693)


Alignment Details
Target: chr2 (Bit Score: 226; Significance: 1e-124; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 43169242 - 43168981
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggg-cggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  43169242 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcgga 43169143  T
Q  100 atttccaacattacctatattccattaattttatttttt-catttggttattaagatagaatgaaatcgatgacattttgttttgttgtgaaggaaacct 198  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  43169142 atttccaacattacctatattccattaattttatttttttcgtttggttattaagatagaatgaaatcgatgacattttgttttgttgtgaaggaaatct 43169043  T
Q  199 gcctacacattggttggttcttgtgatggcattctacccacaaggtgtttctagagttgtct 260  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  43169042 gcctacacattggttggttcttatgatggcattctgcccacaaggtgtttctagagttgtct 43168981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 43219019 - 43219138
Alignment:
Q  141 tttggttattaagatagaatgaaatcgatgacattttgttttgttgtgaaggaaacctgcctacacattggttggttcttgtgatggcattctacccaca 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||    
T  43219019 tttggttattaagatagaatgaaatcgatgacattttgttttgttgtgaaggaaatctgcctacacattggttggttcttatgatggcattctgcccaca 43219118  T
Q  241 aggtgtttctagagttgtct 260  Q
    ||||||||||||||||||||    
T  43219119 aggtgtttctagagttgtct 43219138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 43195784 - 43195675
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  43195784 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcgga 43195685  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  43195684 atttccaaca 43195675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 3976259 - 3976368
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||| |    
T  3976259 ccccctcaaagccaacataatgaaggtgttggaggctgcaattaaggctaactgaaggtcgcaatttaggcgactaggggcggaccacaattaaggtgaa 3976358  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  3976359 atttccaaca 3976368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 3977107 - 3977216
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||| |||    
T  3977107 ccccctcagagccaacacaatgaaggtgttagaggctgcaattaaggctaaccgaaggatgcaatttaggcgactaggggcggaccgcaattaaggcgga 3977206  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  3977207 atttccaaca 3977216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 7877844 - 7877735
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggg-cggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| | |||    
T  7877844 ccccctcaaagccaacacaatgaagatgttggagactgcaatgaaggctaaccgaaggtcgcaatttaggcgactagggacggaccgcaattaaagcgga 7877745  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  7877744 atttccaaca 7877735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 21213989 - 21214098
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||| ||||||||| ||||||||| |||    
T  21213989 ccccctcaaagccaacacaatgaaggtgttggaggcggcaattaaggctaaccaaagatcgcaatttaggcgactaggggcggaccacaattaaggcgga 21214088  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  21214089 atttccaaca 21214098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 21214305 - 21214414
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| |||    
T  21214305 ccccctcaaagccaacacaatgaaggttttggaggcggcaattaaggctaaccaaaggtcacaatttaggcgactaggggcggaccgcaattaaggcgga 21214404  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  21214405 atttccaaca 21214414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 3976575 - 3976683
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| || ||| ||||||| |||||||||||    
T  3976575 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaa-tgaaggtcgcaatttaggcgattaggggtggaccgcgattaaggtgga 3976673  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  3976674 atttccaaca 3976683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 6183470 - 6183589
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggag-------gctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggg-cggaccgcaatta 92  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  6183470 ccccctcaaagccaacacaatgaaggtgttggagcctagaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactagggacggaccacaatta 6183569  T
Q  93 aggtggaatttccaacatta 112  Q
    ||| ||||||||||||||||    
T  6183570 aggcggaatttccaacatta 6183589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 17509109 - 17509000
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||| | |||||||| |||||||||| |||    
T  17509109 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaattaaggcgacgaggggcggactgcaattaaggcgga 17509010  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  17509009 atttccaaca 17509000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 23054326 - 23054217
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgact-agggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||  |||| ||||||||||||||||||    
T  23054326 ccccctcaaagccaacacattgaaggtgttggaggctgcaattaaagctaaccaaaggtcgcaatttagacgactccgggcagaccgcaattaaggtgga 23054227  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  23054226 atttccaaca 23054217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 18901968 - 18902069
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||| ||||||||| ||||||||| |||    
T  18901968 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaagatcgcaatttaggcgactaggggcggaccacaattaaggcgga 18902067  T
Q  100 at 101  Q
    ||    
T  18902068 at 18902069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 42768439 - 42768545
Alignment:
Q  4 cctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatt 102  Q
    |||||||||||||||||||||||| |||  ||||||||| |||||||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||    
T  42768439 cctcaaagccaacacaatgaaggtattgttggctgcaatgaaggctaaccaaaggtcgcaatttaggcgactaggggcgaaccgcaattaaggcggaatt 42768538  T
Q  103 tccaaca 109  Q
    |||||||    
T  42768539 tccaaca 42768545  T

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Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 25441688 - 25441587
Alignment:
Q  9 aagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaa 107  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||| |||| ||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  25441688 aagccaacacaatcaaggtattggaggctgcaatgaaggctaaccaaaggccgcaatttaggcgactaggggcggaccgcaataaaggtggaatttccaa 25441589  T
Q  108 ca 109  Q
    ||    
T  25441588 ca 25441587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 30166183 - 30166292
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||| | |||||||||||||| |||||||||| ||||||| |||||||||||| ||||||||| ||||||||| ||||||||| |||    
T  30166183 ccccctcaaagccaacatagtgaaggtgttggagactgcaattaaagctaaccaaaggtcgcaattaaggcgactaggggcggaccacaattaaggcgga 30166282  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  30166283 atttccaaca 30166292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 5424864 - 5424969
Alignment:
Q  5 ctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggg-cggaccgcaattaaggtggaattt 103  Q
    ||||||| |||||||||||||||||||||||||||||| ||||  |||| |||| ||||||||||||||||||||  |||| ||||||||||||||||||    
T  5424864 ctcaaaggcaacacaatgaaggtgttggaggctgcaatgaaggaaaaccaaaggccgcaatttaggcgactagggaaggacagcaattaaggtggaattt 5424963  T
Q  104 ccaaca 109  Q
    ||||||    
T  5424964 ccaaca 5424969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 11969045 - 11968942
Alignment:
Q  10 agccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaac 108  Q
    ||||||||||||||||||| ||||||||||||  |||||||||| |||||| ||||||||||||||| |||||||| |||||||||| |||||||||||     
T  11969045 agccaacacaatgaaggtgctggaggctgcaacgaaggctaacccaaggtcacaatttaggcgactaggggcggactgcaattaaggcggaatttccaat 11968946  T
Q  109 atta 112  Q
    ||||    
T  11968945 atta 11968942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 15820205 - 15820298
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga-ctagggcggaccgcaattaa 93  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| ||||||| |||| | |  |||||||||||||||||    
T  15820205 ccccctcaaagccaacacaatgaaggtgttggaggctgcaataaaggcaaaccaaaggccgcaattaaggcaaccgggggcggaccgcaattaa 15820298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 3976827 - 3976900
Alignment:
Q  37 tgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaaca 109  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||| | |||||||||||||    
T  3976827 tgcaattaaggctaaccgaaggtcgcaatgtaggcgactaggggcggatcgcaattaaagcggaatttccaaca 3976900  T

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Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 43688526 - 43688635
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactag-ggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||| | |||| |||| ||||||||| ||||| || || |||||||||| |||  | |    
T  43688526 ccccctcaaagccaacataatgaaggtgttggaggctgcaatgaagacaaaccaaaggccgcaatttaagcgaccagaggtggaccgcaataaagtcgaa 43688625  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  43688626 atttccaaca 43688635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 10849601 - 10849704
Alignment:
Q  7 caaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttcc 105  Q
    |||||||||||||||||||||||||| ||||||||| || || || | || | ||||||| |||| |||| |||||||||||||| |||| |||||||||    
T  10849601 caaagccaacacaatgaaggtgttggcggctgcaatgaaagcaaatcaaaagccgcaattaaggcaactaggggcggaccgcaataaaggcggaatttcc 10849700  T
Q  106 aaca 109  Q
    ||||    
T  10849701 aaca 10849704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 18183455 - 18183419
Alignment:
Q  12 ccaacacaatgaaggtgttggaggctgcaattaaggc 48  Q
    ||||||||||||||||||||||||||||||| |||||    
T  18183455 ccaacacaatgaaggtgttggaggctgcaatgaaggc 18183419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 3004012 - 3004049
Alignment:
Q  2 cccctcaaagccaacacaatgaaggtgttggaggctgc 39  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  3004012 cccctcacacccaacacaatgaaggtgttggaggctgc 3004049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 11339813 - 11339846
Alignment:
Q  14 aacacaatgaaggtgttggaggctgcaattaagg 47  Q
    ||||||||||||||||||||||||||||| ||||    
T  11339813 aacacaatgaaggtgttggaggctgcaataaagg 11339846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 6e-49; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13843697 - 13843587
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  13843697 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcgga 13843598  T
Q  100 atttccaacat 110  Q
    |||||||||||    
T  13843597 atttccaacat 13843587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 13844013 - 13843904
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  13844013 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggggcggaccacaattaaggtgga 13843914  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  13843913 atttccaaca 13843904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 27760391 - 27760282
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| | |||| |||||||||||||| |||    
T  27760391 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcgaccaggggcagaccgcaattaaggcgga 27760292  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  27760291 atttccaaca 27760282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 1028197 - 1028305
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactagggcggaccgcaattaaggtggaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||||| |||| |||||||||| ||||    
T  1028197 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgtaggctaaccaaaggttgcaatttaggcgactaggggggactgcaattaaggcggaa 1028296  T
Q  101 tttccaaca 109  Q
    |||||||||    
T  1028297 tttccaaca 1028305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 20811454 - 20811351
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||| ||||||| |||    
T  20811454 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccaaaggtcggaatttaggcgactaggggcggaccgctattaaggcgga 20811355  T
Q  100 attt 103  Q
    ||||    
T  20811354 attt 20811351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 20837809 - 20837706
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||| |||    
T  20837809 ccccctcaaagccaacacaatgaaggtgttggatgctgcaattaaggctaaccaaaggtcgcaatttaggcgactaggggcggaccgctattaaggcgga 20837710  T
Q  100 attt 103  Q
    ||||    
T  20837709 attt 20837706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 17016197 - 17016304
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactagggcggaccgcaattaaggtggaa 100  Q
    |||||||||||||||||||||||||||||||||||||  ||| |||||||||| || |||||||||||||| ||||||||||||||||||||||| ||||    
T  17016197 ccccctcaaagccaacacaatgaaggtgttggaggctataatgaaggctaaccaaaagtcgcaatttaggc-actagggcggaccgcaattaaggcggaa 17016295  T
Q  101 tttccaaca 109  Q
    |||||||||    
T  17016296 tttccaaca 17016304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 27760075 - 27759967
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||| ||||| ||||||||||||||||| |||| ||| ||||||||||||||| |||    
T  27760075 ccccctcaaagccaacacaatgaaagtgttggaggctgcaatgaaggttaaccaaaggtcgcaatttaggctactaggggaggaccgcaattaaggcgga 27759976  T
Q  100 atttccaac 108  Q
    |||||||||    
T  27759975 atttccaac 27759967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 37995738 - 37995850
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||| |||| |||| ||||||||||||||||| |||| ||||||||| |||| |||    
T  37995738 ccccctcaaagccaacacaatgaaggtgttggaagctggaatgaaggcaaaccaaaggccgcaatttaggcgactaggggcagaccgcaataaaggcgga 37995837  T
Q  100 atttccaacatta 112  Q
    |||||||||||||    
T  37995838 atttccaacatta 37995850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 873800 - 873908
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactagggcggaccgcaattaaggtggaa 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||| |||||||||||| ||  |||||||||||||| |||| || |    
T  873800 ccccctcaaagccaacacaatgaaggtgttggaagctgcaatgaaggcaaaccaaaggccgcaatttaggccacaggggcggaccgcaataaaggcggga 873899  T
Q  101 tttccaaca 109  Q
    |||||||||    
T  873900 tttccaaca 873908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 24994072 - 24993963
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||||||||||| | |||||| ||||  |||| || |||||||||||||||| || |||||||||||||| ||||||||    
T  24994072 ccccctcaaagccaacacaatgaaggtgttggaagttgcaatgaaggtaaaccaaatgtcgcaatttaggcgattaggggcggaccgcaataaaggtgga 24993973  T
Q  100 atttccaaca 109  Q
    ||||| ||||    
T  24993972 atttcgaaca 24993963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 28010220 - 28010329
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||| | || |||| ||||||||||| ||||| |||| ||||||||| |||| |||    
T  28010220 ccccctcaaagccaacacaatgaaggtgttgaaggctgcaatgaaggcaagccaaaggccgcaatttaggtgactaggggcagaccgcaataaaggcgga 28010319  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  28010320 atttccaaca 28010329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 24918164 - 24918055
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||||||||||| | |||||| ||||| |||| || ||| |||||||||||| || |||||||||||||| |||| |||    
T  24918164 ccccctcaaagccaacacaatgaaggtgttggaagttgcaatgaaggcaaaccaaatgtcacaatttaggcgattaggggcggaccgcaatgaaggcgga 24918065  T
Q  100 atttccaaca 109  Q
    ||||| ||||    
T  24918064 atttcgaaca 24918055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 38131762 - 38131657
Alignment:
Q  3 ccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaat 101  Q
    ||||||||||||||||||||   ||||||||||||||||| ||||| |||| |||| | |||||||| |||||| |||||||||||||| ||||  ||||    
T  38131762 ccctcaaagccaacacaatg---gtgttggaggctgcaatgaaggccaaccaaaggccacaatttagacgactaggggcggaccgcaataaaggcagaat 38131666  T
Q  102 ttccaacat 110  Q
    |||||||||    
T  38131665 ttccaacat 38131657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 12595239 - 12595316
Alignment:
Q  33 aggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaaca 109  Q
    |||||||||| |||||||||| || |||| |||||||||||||| ||||||||||||||||||| |||||||||||||    
T  12595239 aggctgcaatgaaggctaaccaaaagtcgaaatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 12595316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 28009903 - 28010010
Alignment:
Q  3 ccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaat 101  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||| | || || |  ||| |||||||||||| |||| ||| |||||||||| |||||    
T  28009903 ccctcaaagccaacacaaagaaggtgtttgaggctgcaatgaaggcaagccaaatgctgcagtttaggcgactaggggcagactgcaattaaggcggaat 28010002  T
Q  102 ttccaaca 109  Q
    ||||||||    
T  28010003 ttccaaca 28010010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 4796347 - 4796311
Alignment:
Q  12 ccaacacaatgaaggtgttggaggctgcaattaaggc 48  Q
    ||||||||||||||||||||||||||||||| |||||    
T  4796347 ccaacacaatgaaggtgttggaggctgcaatgaaggc 4796311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 17435343 - 17435451
Alignment:
Q  2 cccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgact-agggcggaccgcaattaaggtggaa 100  Q
    |||||| | ||||||||||||||||||||||||| |||||| ||| | |||| || | | |||||||||||| | | || ||||| |||| ||||  |||    
T  17435343 cccctcgatgccaacacaatgaaggtgttggaggttgcaatgaagacaaaccaaatgcctcaatttaggcgattaatggtggaccacaataaaggctgaa 17435442  T
Q  101 tttccaaca 109  Q
    |||||||||    
T  17435443 tttccaaca 17435451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 31973549 - 31973585
Alignment:
Q  12 ccaacacaatgaaggtgttggaggctgcaattaaggc 48  Q
    ||||||||||||||||||||||||||||||| |||||    
T  31973549 ccaacacaatgaaggtgttggaggctgcaataaaggc 31973585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 111
Target Start/End: Original strand, 30588226 - 30588260
Alignment:
Q  77 gggcggaccgcaattaaggtggaatttccaacatt 111  Q
    ||||||||||||||||||| |||||||||||||||    
T  30588226 gggcggaccgcaattaaggcggaatttccaacatt 30588260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 6e-46; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 50858012 - 50857903
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||    
T  50858012 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggggtggaccgcaattaaggcgga 50857913  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  50857912 atttccaaca 50857903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 50858328 - 50858219
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||    
T  50858328 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggggtggaccgcaattaaggcgga 50858229  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  50858228 atttccaaca 50858219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 53740182 - 53740073
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||    
T  53740182 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcacaatttaggcgactaggggcggaccgcaattaaggcgga 53740083  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  53740082 atttccaaca 53740073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 52214615 - 52214505
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| |||    
T  52214615 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccaaaggtctcaatttaggcgactaggggcggaccgcaattaaggcgga 52214516  T
Q  100 atttccaacat 110  Q
    |||||||||||    
T  52214515 atttccaacat 52214505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 991038 - 990930
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||  ||    
T  991038 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaagg-cga 990940  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  990939 atttccaaca 990930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 45427356 - 45427465
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||| |||||| |||    
T  45427356 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaacccaaggtcgcaatttaggcgactaggggcggaccgcagttaaggcgga 45427455  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  45427456 atttccaaca 45427465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 29734561 - 29734451
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||| ||||||||| |||    
T  29734561 ccccctcaaagtcaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcgactaggggcggaccacaattaaggcgga 29734462  T
Q  100 atttccaacat 110  Q
    |||||||||||    
T  29734461 atttccaacat 29734451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 45427040 - 45427149
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||| |||||||| |||||||||| |||    
T  45427040 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaagctaacccaaggtcgcaatttaggcgactaggggcggacagcaattaaggcgga 45427139  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  45427140 atttccaaca 45427149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 109
Target Start/End: Complemental strand, 53739843 - 53739748
Alignment:
Q  15 acacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaaca 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||    
T  53739843 acacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcagaatttccaaca 53739748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 15665153 - 15665043
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaa-ccgaaggtcgcaatttaggcgact-agggcggaccgcaattaaggtgg 98  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||  ||||||||||||||||||| ||    
T  15665153 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaacccaaaggtcgcaatttaggcgactgggggcggaccgcaattaaggcgg 15665054  T
Q  99 aatttccaaca 109  Q
    |||||||||||    
T  15665053 aatttccaaca 15665043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 29669467 - 29669575
Alignment:
Q  2 cccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||  |||||| ||||||||| ||||||||||||||||||| ||||    
T  29669467 cccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggcagcaattaaggcgactaggggcggaccgcaattaaggcggaa 29669566  T
Q  101 tttccaaca 109  Q
    |||||||||    
T  29669567 tttccaaca 29669575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 29669782 - 29669890
Alignment:
Q  2 cccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||| ||| ||||||||||||||| ||||    
T  29669782 cccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggccgcaattaaggcgactaggggtggaccgcaattaaggcggaa 29669881  T
Q  101 tttccaaca 109  Q
    |||||||||    
T  29669882 tttccaaca 29669890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 32988377 - 32988483
Alignment:
Q  4 cctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactag-ggcggaccgcaattaaggtggaatt 102  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||| || ||||||||||||| |||||| |||||||||||||||||| ||||||    
T  32988377 cctcaaagccaacacaatgaaggtgttgggggctgcaatgaaggctaaccaaaagtcgcaatttaggtgactagcggcggaccgcaattaaggcggaatt 32988476  T
Q  103 tccaaca 109  Q
    |||||||    
T  32988477 tccaaca 32988483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 990821 - 990732
Alignment:
Q  21 tgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaaca 109  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  990821 tgaaggtgttggaggctgcaattaaggctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 990732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 23018470 - 23018361
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggg-cggaccgcaattaaggtgga 99  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||| ||||||||||| |||| |||    
T  23018470 cccccttaaagccaacacaatgaaggtgttggaggttgcaatgaaggctaaccaaaggtcgcaatttaggcgactagggacggaccgcaatgaaggcgga 23018371  T
Q  100 atttccaaca 109  Q
    ||| ||||||    
T  23018370 attaccaaca 23018361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 53738312 - 53738421
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||| ||| |||||||||| |||| |||    
T  53738312 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggcaaaccaaaggccgcaatttaggcgactaggggtggaccgcaataaaggcgga 53738411  T
Q  100 atttccaaca 109  Q
    ||| ||||||    
T  53738412 attaccaaca 53738421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 43972355 - 43972246
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgact-agggcggaccgcaattaaggtgga 99  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||| || | |||| ||||||||||||||||  |||| ||||||||| ||||||||    
T  43972355 ccccctcaaaaccaacacaatgaaggtgttggaggctgcaatgaaggcaaatcaaaggccgcaatttaggcgactgggggcagaccgcaatgaaggtgga 43972256  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  43972255 atttccaaca 43972246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 49544331 - 49544226
Alignment:
Q  3 ccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactagggcggaccgcaattaaggtggaatt 102  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||| ||||||| |||||||||||| ||||| |||| |||  ||||||    
T  49544331 ccctcaaagccaacacaatcaaggtgttggaggctgcaatgaaggctaaccaaaggccgcaattaaggcgactaggg-ggaccacaataaagacggaatt 49544233  T
Q  103 tccaaca 109  Q
    |||||||    
T  49544232 tccaaca 49544226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 991204 - 991139
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatt 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  991204 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccaaaggtcgcaatt 991139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 56509609 - 56509504
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggc-gacta-gggcggaccgcaattaaggtgg 98  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||| ||| |||||||| ||||| |||||||||||||| |||||||    
T  56509609 ccccctcaaagccaacacaatgaaggtgttggaagctgcaatgaaggcaaaccaaaggccgcgatttaggcggactaggggcggaccgcaataaaggtgg 56509510  T
Q  99 aatttc 104  Q
    ||||||    
T  56509509 aatttc 56509504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 990547 - 990476
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcg 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  990547 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccaaaggtggcaattaaggcg 990476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 43972039 - 43971924
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||  |||| ||||||| |||||||||  ||| |||| ||||||||| ||||||||    
T  43972039 cccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggtaaaccaaaggtcgtaatttaggcagctaggggcagaccgcaatgaaggtgga 43971940  T
Q  100 atttccaacattacct 115  Q
    ||||||| ||| ||||    
T  43971939 atttccaccatgacct 43971924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 51469466 - 51469374
Alignment:
Q  21 tgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaacatta 112  Q
    |||||||||||||||||||||| ||||| |||| || | ||||||||||||||||| |||||||||||||| |||| ||||||||||||||||    
T  51469466 tgaaggtgttggaggctgcaatgaaggcaaacccaaaggcgcaatttaggcgactaggggcggaccgcaataaaggcggaatttccaacatta 51469374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 17222783 - 17222849
Alignment:
Q  44 aaggctaaccgaaggtcgcaatttaggcgactag-ggcggaccgcaattaaggtggaatttccaaca 109  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17222783 aaggctaaccaaaggtcgcaatttaggcgactagaggcggaccgcaattaaggtggaatttccaaca 17222849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 48843121 - 48843231
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||| |||||||| ||||||||||||| |||||||||| ||||  || | |||| ||||||||||||||||| ||| |||||||||| |||| |||    
T  48843121 ccccctcagagccaacaaaatgaaggtgttgaaggctgcaatgaaggaaaatcaaaggccgcaatttaggcgactaggggtggaccgcaataaaggcgga 48843220  T
Q  100 atttccaacat 110  Q
    |||||||||||    
T  48843221 atttccaacat 48843231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 36558570 - 36558679
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||| ||||||||||||||| ||| || ||||| |||| |||| ||||||| ||| ||||| |||||||| ||||||||||  ||    
T  36558570 ccccctcaaagccaacacagtgaaggtgttggaggttgctatgaaggcaaaccaaaggccgcaattaaggtgactaggggcggactgcaattaaggcaga 36558669  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  36558670 atttccaaca 36558679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 22867084 - 22866975
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||| ||||| |||||||||||| |||||||| ||||| |||  |||| ||||||| ||||||||| |||| |||| |||| |||| |||    
T  22867084 ccccctcaaagccagcacaacgaaggtgttggaagctgcaatgaaggcaaactaaaggccgcaattaaggcgactaggggcagaccacaataaaggcgga 22866985  T
Q  100 atttccaaca 109  Q
    ||||| ||||    
T  22866984 atttctaaca 22866975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 18862642 - 18862548
Alignment:
Q  19 aatgaaggtgttggaggctgc---aattaaggctaaccgaaggtcgcaatttaggcgactag-ggcggaccgcaattaaggtggaatttccaaca 109  Q
    |||||||||||||||||||||   ||| || ||||||  ||||| ||||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  18862642 aatgaaggtgttggaggctgctacaatgaaagctaacaaaaggttgcaatttaggcgactagaggcggaccgcgattaaggcggaatttccaaca 18862548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 44898837 - 44898873
Alignment:
Q  12 ccaacacaatgaaggtgttggaggctgcaattaaggc 48  Q
    ||||||||||||||||||||||||||||||| |||||    
T  44898837 ccaacacaatgaaggtgttggaggctgcaatgaaggc 44898873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 51470475 - 51470435
Alignment:
Q  8 aaagccaacacaatgaaggtgttggaggctgcaattaaggc 48  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  51470475 aaagccaacacagtgaaggtgttggaggctgcaatgaaggc 51470435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 3137748 - 3137784
Alignment:
Q  12 ccaacacaatgaaggtgttggaggctgcaattaaggc 48  Q
    |||||||||||||||||||| |||||||||| |||||    
T  3137748 ccaacacaatgaaggtgttgcaggctgcaatgaaggc 3137784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 30491066 - 30491102
Alignment:
Q  12 ccaacacaatgaaggtgttggaggctgcaattaaggc 48  Q
    |||||||| |||||||||||||||||||||| |||||    
T  30491066 ccaacacattgaaggtgttggaggctgcaatgaaggc 30491102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42788130 - 42788090
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaa 41  Q
    |||| ||||| ||||| ||||||||||||||||||||||||    
T  42788130 ccccttcaaatccaacccaatgaaggtgttggaggctgcaa 42788090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 6e-46; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 44573955 - 44573846
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  44573955 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcgga 44573856  T
Q  100 atttccaaca 109  Q
    ||||| ||||    
T  44573855 atttctaaca 44573846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 45443280 - 45443168
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||    
T  45443280 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcgga 45443181  T
Q  100 atttccaacatta 112  Q
    |||||||||||||    
T  45443180 atttccaacatta 45443168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 54369039 - 54368930
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||    
T  54369039 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcgga 54368940  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  54368939 atttccaaca 54368930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 27219329 - 27219220
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||| |||    
T  27219329 ccccctcaaagccaacacgatgaaggtgttggaggctgcaattacggctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcgga 27219230  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  27219229 atttccaaca 27219220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 44573326 - 44573217
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgact-agggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||| ||||| |||    
T  44573326 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactgggggcggatcgcaactaaggcgga 44573227  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  44573226 atttccaaca 44573217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 4255510 - 4255401
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||| ||||||||||||||| ||||||||||||||||||| |||    
T  4255510 ccccctcaaagccaacacaatgaaggtgttggaggctacaatgaaggctaaccaaaggtcccaatttaggcgactaggggcggaccgcaattaaggcgga 4255411  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  4255410 atttccaaca 4255401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 13769395 - 13769504
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||||||||| | |||    
T  13769395 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggttgcaatttaggcgactaggggcggaccgcaattaaagcgga 13769494  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  13769495 atttccaaca 13769504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 41380724 - 41380615
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||| |||||| |||||||||||| |||    
T  41380724 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaattaaggcgactaggggcgggccgcaattaaggcgga 41380625  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  41380624 atttccaaca 41380615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 44573639 - 44573533
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  44573639 ccccctcaaagccaacacaatg---gtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcgga 44573543  T
Q  100 atttccaaca 109  Q
    || |||||||    
T  44573542 atctccaaca 44573533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 4256234 - 4256125
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| |||||||||||||||| ||| ||||||||||||||| |||    
T  4256234 ccccctcaaagccaacacaataaaggtgttggaggctgcaatgaaggctaaccaaaggttgcaatttaggcgactagggggggaccgcaattaaggcgga 4256135  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  4256134 atttccaaca 4256125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 43101475 - 43101584
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggg-cggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||| |||||| |||||||||  ||    
T  43101475 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggccaaccaaaggtcgcaatttaggcgactagggacggacctcaattaaggcaga 43101574  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  43101575 atttccaaca 43101584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 34715559 - 34715668
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||| ||||||||||||||||||| || |||||||||| |||||||||||||||||||||| ||||||| ||||||||||| |||    
T  34715559 ccccctcaaagccaacacagtgaaggtgttggaggctgcgatgaaggctaaccaaaggtcgcaatttaggcgactaggggcggaacgcaattaaggcgga 34715658  T
Q  100 atttccaaca 109  Q
    ||||| ||||    
T  34715659 atttcaaaca 34715668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 48685422 - 48685531
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactag-ggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||||| |||||| |||||||||||||||| ||||||||||||||||||  ||    
T  48685422 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaaactaaccaaaggtcacaatttaggcgactagaggcggaccgcaattaaggcaga 48685521  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  48685522 atttccaaca 48685531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 24860164 - 24860273
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| |||||||||||| |||| |||||||||||||| ||||  ||    
T  24860164 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggcaaaccaaaggccgcaatttaggcaactaggggcggaccgcaataaaggcaga 24860263  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  24860264 atttccaaca 24860273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 50203961 - 50204050
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaa 89  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||| |||||||||||||    
T  50203961 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcacaatttaggcgactaggggcggaccgcaa 50204050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 47833766 - 47833839
Alignment:
Q  2 cccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgact 75  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  47833766 cccctcaaagccaacacaaggaaggtgttggtggctgcaattaaggctaaccaaaggtcgcaatttaggcgact 47833839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 46139232 - 46139122
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggg-cggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||| |||||| ||  || ||||||||||||||||||  ||||| |||||||||||||    
T  46139232 ccccctcaaagccaacacaatgaagatgttggaggttgcaatgaagactaaccaaatatcacaatttaggcgactagggatggacc-caattaaggtgga 46139134  T
Q  100 atttccaacatt 111  Q
    ||||||||||||    
T  46139133 atttccaacatt 46139122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 14170104 - 14170213
Alignment:
Q  2 cccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||| |||| || | ||||||||||||| ||| |||||| ||||||| |||| ||||    
T  14170104 cccctcaaagccaacacaatgaaggtgatggaggctgcaatgaaggcaaaccaaatgccgcaatttaggcggctaggggcgggccgcaataaaggcggaa 14170203  T
Q  101 tttccaacat 110  Q
     |||||||||    
T  14170204 cttccaacat 14170213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 9658282 - 9658193
Alignment:
Q  19 aatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaa 107  Q
    |||||||||||||||||||||||| |||| ||||| ||||  |||||||||||||||| |||| ||| |||||||||| |||||||||||    
T  9658282 aatgaaggtgttggaggctgcaatgaaggttaaccaaaggctgcaatttaggcgactaggggctgacagcaattaaggcggaatttccaa 9658193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 662726 - 662619
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||| ||||| |||||||||| |||||||||||||||||||| ||||| | || || | ||||| ||||||||||| ||||||||||||||| ||| |||    
T  662726 ccccttcaaacccaacacaataaaggtgttggaggctgcaatgaaggcaacccaaatggcgcaa-ttaggcgactaggggcggaccgcaatt-aggcgga 662629  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  662628 atttccaaca 662619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 34250456 - 34250564
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactagg-gcggaccgcaattaaggtgga 99  Q
    |||| ||||| | |||||||| |||||||||||||||||||| ||||| | || || ||||||| ||||||| ||||| || |||||||||||||| |||    
T  34250456 ccccttcaaacctaacacaattaaggtgttggaggctgcaatgaaggcaacccaaatgtcgcaa-ttaggcggctaggagctgaccgcaattaaggcgga 34250554  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  34250555 atttccaaca 34250564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3985773 - 3985716
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaagg 58  Q
    ||||||||||||||||||| ||||||||||||||||||| || ||||| |||| ||||    
T  3985773 ccccctcaaagccaacacagtgaaggtgttggaggctgctatgaaggcaaaccaaagg 3985716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 4255808 - 4255761
Alignment:
Q  63 aatttaggcgactaggg-cggaccgcaattaaggtggaatttccaaca 109  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||    
T  4255808 aatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 4255761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 4255990 - 4255943
Alignment:
Q  63 aatttaggcgactaggg-cggaccgcaattaaggtggaatttccaaca 109  Q
    ||||||||||||||||| |||||||||||||||| |||||| ||||||    
T  4255990 aatttaggcgactaggggcggaccgcaattaaggcggaattcccaaca 4255943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 3985684 - 3985618
Alignment:
Q  44 aaggctaaccgaaggtcgcaatttaggcgactaggg-cggaccgcaattaaggtggaatttccaaca 109  Q
    ||||| |||| |||| ||||||| |||||||||||| ||||| ||||||||||  ||||||||||||    
T  3985684 aaggcaaaccaaaggccgcaattaaggcgactaggggcggactgcaattaaggcagaatttccaaca 3985618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31603977 - 31603931
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 47  Q
    |||||||||||  |||||||||||||| |||||||||||||| ||||    
T  31603977 ccccctcaaaggtaacacaatgaaggttttggaggctgcaataaagg 31603931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 1e-43; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 21653326 - 21653217
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||| |||    
T  21653326 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaaatcgcaatttaggcgactaggggcggaccgcaattaaggcgga 21653227  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  21653226 atttccaaca 21653217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 36997166 - 36997057
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| |||    
T  36997166 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccaaaggtcacaatttaggcgactaggggcggaccgcaattaaggcgga 36997067  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  36997066 atttccaaca 36997057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 21653803 - 21653700
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactagggcggaccgcaattaaggtggaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||| ||||    
T  21653803 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaagatcgcaatttaggcgactaggggggactgcaattaaggcggaa 21653704  T
Q  101 tttc 104  Q
    ||||    
T  21653703 tttc 21653700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 18905856 - 18905747
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||    
T  18905856 ccccctcaaagccaacacaataaaggtgttggaggctgcaattaaggctaaccaaaggtcgcaaattaggcgactaggggcggaccgcaattaaggcgga 18905757  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  18905756 atttccaaca 18905747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 3184007 - 3184116
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||| |||||||||||||| |||| |||    
T  3184007 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggcaaaccaaaggccgcaatttaggcgactaggggcggaccgcaataaaggcgga 3184106  T
Q  100 atttccaaca 109  Q
    |||| |||||    
T  3184107 atttacaaca 3184116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 32931389 - 32931297
Alignment:
Q  18 caatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaaca 109  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  32931389 caatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 32931297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 31767001 - 31766890
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||| |||| |||| ||||||||||| ||||| |||||||||||||| |||| |||    
T  31767001 ccccctcaaagccaacacaatgaaggggttggaggctgcaatgaaggcaaaccaaaggccgcaatttaggtgactaggggcggaccgcaatgaaggcgga 31766902  T
Q  100 atttccaacatt 111  Q
    ||||||||||||    
T  31766901 atttccaacatt 31766890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 20298620 - 20298729
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgac-tagggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||| | |||||   ||||||||||||||||||| |||    
T  20298620 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggttgcaattgacgcgacagggggcggaccgcaattaaggcgga 20298719  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  20298720 atttccaaca 20298729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 21085252 - 21085361
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgac-tagggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||| | |||||   ||||||||||||||||||| |||    
T  21085252 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggttgcaattgacgcgacagggggcggaccgcaattaaggcgga 21085351  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  21085352 atttccaaca 21085361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 40754444 - 40754333
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| | ||||||||||||||| |||||||||||||| |||| |||    
T  40754444 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggcaaacctaaggccccaatttaggcgactaggggcggaccgcaataaaggcgga 40754345  T
Q  100 atttccaacatt 111  Q
     |||||| ||||    
T  40754344 ttttccagcatt 40754333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 23027932 - 23028041
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||| | || |||| ||||||||||| ||||| |||| ||||||||| |||| |||    
T  23027932 ccccctcaaagccaacacaatgaaggtgttgaaggctgcaatgaaggcaagccaaaggccgcaatttaggtgactaggggcagaccgcaataaaggcgga 23028031  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  23028032 atttccaaca 23028041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 23027609 - 23027718
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||| | || || |  |||||||||||||||| |||||||| ||||| |||| |||    
T  23027609 ccccctcaaagccaacacaatgaaggtgtttgaggctgcaatgaaggcaagccaaatgctgcaatttaggcgactaggggcggactgcaatgaaggcgga 23027708  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  23027709 atttccaaca 23027718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 22277524 - 22277415
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||| |||||| ||||||||||||||||| ||||| |||  ||||  |||||||||||||||| |||||||||||||| |||  |||    
T  22277524 ccccctcaaagccaacaaaatgaaagtgttggaggctgcaatgaaggcaaactaaaggctgcaatttaggcgactaggggcggaccgcaataaagacgga 22277425  T
Q  100 atttccaaca 109  Q
    |||| |||||    
T  22277424 attttcaaca 22277415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 38887090 - 38886993
Alignment:
Q  12 ccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaaca 109  Q
    ||||||||||||||||||||||||||||||  ||||| | || || | ||||| ||||||| ||| ||| |||| ||||| |||| |||||||||||||    
T  38887090 ccaacacaatgaaggtgttggaggctgcaacgaaggcaacccaaatgccgcaa-ttaggcggctaggggtggacagcaatgaaggaggaatttccaaca 38886993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 44933185 - 44933232
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 48  Q
    |||| ||||| |||||||||||||||||||||||| |||||| |||||    
T  44933185 ccccttcaaacccaacacaatgaaggtgttggagggtgcaatgaaggc 44933232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 48
Target Start/End: Complemental strand, 21653577 - 21653547
Alignment:
Q  18 caatgaaggtgttggaggctgcaattaaggc 48  Q
    |||||||||||||||||||||||||||||||    
T  21653577 caatgaaggtgttggaggctgcaattaaggc 21653547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 30590435 - 30590401
Alignment:
Q  14 aacacaatgaaggtgttggaggctgcaattaaggc 48  Q
    ||||||||||||||||||||||||||||| |||||    
T  30590435 aacacaatgaaggtgttggaggctgcaatgaaggc 30590401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 39590687 - 39590651
Alignment:
Q  12 ccaacacaatgaaggtgttggaggctgcaattaaggc 48  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  39590687 ccaacacaatgaaggtgttggagactgcaatgaaggc 39590651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 1e-43; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 257371 - 257480
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||    
T  257371 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcgga 257470  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  257471 atttccaaca 257480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 40121722 - 40121831
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||    
T  40121722 ccccctcaaagccaacacaataaaggtgttggaggctgcaattaaggctaaccgaaggtagcaatttaggcgactaggggcggaccgcaattaaggcgga 40121821  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  40121822 atttccaaca 40121831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 43167997 - 43168106
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||    
T  43167997 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcgga 43168096  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  43168097 atttccaaca 43168106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 40122043 - 40122139
Alignment:
Q  14 aacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaaca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||    
T  40122043 aacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggggtggaccgcaattaaggcggaatttccaaca 40122139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 41670868 - 41670759
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||| |||| |||||||| |||||||||| |||    
T  41670868 ccccctcaaagccaacacaatgagggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcaactaggggcggactgcaattaaggcgga 41670769  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  41670768 atttccaaca 41670759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 1663709 - 1663817
Alignment:
Q  2 cccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||| ||||    
T  1663709 cccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggccgcaattaaggcaactaggggcggaccgcaattaaggcggaa 1663808  T
Q  101 tttccaaca 109  Q
    |||||||||    
T  1663809 tttccaaca 1663817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 1661295 - 1661404
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||||| ||||| ||||||| |||    
T  1661295 ccccgtcaaagccaacgcaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcaactaggggcgaaccgcgattaaggcgga 1661394  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  1661395 atttccaaca 1661404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 28910032 - 28909923
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| || || |||| |||| ||||||||||||||||| ||||||||| |||| |||| |||    
T  28910032 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaagcaaaccaaagggcgcaatttaggcgactaggggcggaccacaataaaggcgga 28909933  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  28909932 atttccaaca 28909923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 7135347 - 7135456
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||||   |||||| |||||| |||||||||| |||||||||||||||| ||||| ||||||||||||||||| | |||    
T  7135347 ccccctcaaagccaacacaatgaaggaaatggaggttgcaatgaaggctaaccaaaggtcgcaatttaggtgactaggggcggaccgcaattaaagcgga 7135446  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  7135447 atttccaaca 7135456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 41670583 - 41670475
Alignment:
Q  2 cccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaa 100  Q
    ||||||||||||||||||| |||||||||||||| |||||| |||||||||| |||||||||| ||||||||||| |||||||||  |||||||| ||||    
T  41670583 cccctcaaagccaacacaacgaaggtgttggaggatgcaatgaaggctaaccaaaggtcgcaaattaggcgactaggggcggaccaaaattaaggcggaa 41670484  T
Q  101 tttccaaca 109  Q
    |||| ||||    
T  41670483 tttcaaaca 41670475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 30296624 - 30296520
Alignment:
Q  6 tcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttc 104  Q
    |||||||||||||||||||||||||||  |||| ||| ||| |||||| |||||||||||||||||||||| ||||||| | ||||||||| ||||||||    
T  30296624 tcaaagccaacacaatgaaggtgttggttgctgtaatgaagactaaccaaaggtcgcaatttaggcgactaggggcggatcacaattaaggcggaatttc 30296525  T
Q  105 caaca 109  Q
    |||||    
T  30296524 caaca 30296520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 29780443 - 29780352
Alignment:
Q  17 acaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaa 107  Q
    |||||||||||||||||||||||||| ||||| |||  || | ||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  29780443 acaatgaaggtgttggaggctgcaatgaaggcaaactaaaagccgcaatttaggcgactaggggcggaccgcaataaaggtggaatttccaa 29780352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 3973160 - 3973052
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||| ||||||| |||||||||||| |||||||||| ||||| | || || || |||| ||||||| ||| ||| |||||||||| |||| |||    
T  3973160 ccccctcaaacccaacacgatgaaggtgttgaaggctgcaatgaaggcaacccaaatgttgcaa-ttaggcggctaggggtggaccgcaatgaaggcgga 3973062  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  3973061 atttccaaca 3973052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41710018 - 41709977
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaat 42  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  41710018 ccccctcaaagccaacacaatgaaggtgttggaggttgcaat 41709977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 29780143 - 29780101
Alignment:
Q  5 ctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 47  Q
    ||||||| |||||||||||||||||||||||||||||| ||||    
T  29780143 ctcaaagtcaacacaatgaaggtgttggaggctgcaatgaagg 29780101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 32000816 - 32000770
Alignment:
Q  2 cccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 48  Q
    ||||||||||||||||| |||||||||||| |||||||||| |||||    
T  32000816 cccctcaaagccaacaccatgaaggtgttgaaggctgcaatgaaggc 32000770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 10193492 - 10193588
Alignment:
Q  13 caacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactagggcggaccgcaattaaggtggaatttccaaca 109  Q
    ||||||||| |||| ||||||||||||||||||||| | || || | ||||| | ||||  |||||||  ||  ||||||||| |||||||||||||    
T  10193492 caacacaataaaggagttggaggctgcaattaaggcaacccaaatgccgcaaatgaggcagctagggcaaacaccaattaaggcggaatttccaaca 10193588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 10406693 - 10406737
Alignment:
Q  4 cctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 48  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||    
T  10406693 cctcaaagccaacacagtgaaagtgttggaggctgcaatgaaggc 10406737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 14092016 - 14092052
Alignment:
Q  12 ccaacacaatgaaggtgttggaggctgcaattaaggc 48  Q
    ||||||||||||||||||||||||||||||| |||||    
T  14092016 ccaacacaatgaaggtgttggaggctgcaatgaaggc 14092052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 14402034 - 14402070
Alignment:
Q  12 ccaacacaatgaaggtgttggaggctgcaattaaggc 48  Q
    ||||||||||||||||||||||||||||||| |||||    
T  14402034 ccaacacaatgaaggtgttggaggctgcaatgaaggc 14402070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 30610921 - 30610957
Alignment:
Q  12 ccaacacaatgaaggtgttggaggctgcaattaaggc 48  Q
    ||||||||||||||||||||||||||||||| |||||    
T  30610921 ccaacacaatgaaggtgttggaggctgcaatgaaggc 30610957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 23721132 - 23721035
Alignment:
Q  12 ccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaaca 109  Q
    |||||||||||| | |||||||||||||||| ||||| | || || | ||||| ||||| | ||| ||| |||||||| | ||||||||||||||||||    
T  23721132 ccaacacaatgatgttgttggaggctgcaatgaaggcaacccaaatgccgcaa-ttaggtggctaggggaggaccgcattaaaggtggaatttccaaca 23721035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 106
Target Start/End: Complemental strand, 8585028 - 8584999
Alignment:
Q  77 gggcggaccgcaattaaggtggaatttcca 106  Q
    ||||||||||||||||||||||||||||||    
T  8585028 gggcggaccgcaattaaggtggaatttcca 8584999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 4e-41; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 31305711 - 31305602
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||    
T  31305711 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcgactaggggtggaccgcaattaaggcgga 31305612  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  31305611 atttccaaca 31305602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 35926327 - 35926434
Alignment:
Q  3 ccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaat 101  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  35926327 ccctcaaagccaacacaatgaaggtgttggaggttgcaatgaaggctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcggaat 35926426  T
Q  102 ttccaaca 109  Q
    ||||||||    
T  35926427 ttccaaca 35926434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 8520342 - 8520448
Alignment:
Q  4 cctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatt 102  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  8520342 cctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaagcggaatt 8520441  T
Q  103 tccaaca 109  Q
    |||||||    
T  8520442 tccaaca 8520448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 20735522 - 20735413
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||| |||||||||||||| |||    
T  20735522 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcgactaggggcagaccgcaattaaggcgga 20735423  T
Q  100 atttccaaca 109  Q
    |||| |||||    
T  20735422 attttcaaca 20735413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 17419787 - 17419678
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||| |||| |||| ||||||||| |||    
T  17419787 ccccctcaaagccaacacaatgaaggtgtttgaggctgcaattaaggctaaccaaaggtcgcaattaaggcgactaggggcagaccacaattaaggcgga 17419688  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  17419687 atttccaaca 17419678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 19937147 - 19937256
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| || ||||||||| |||||||||  ||    
T  19937147 ccccatcaaagccaacacaatgaaggtgttggaggatgcaattaaggctaaccaaaggtcgcaatttaggcgattaggggcggaccacaattaaggcaga 19937246  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  19937247 atttccaaca 19937256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 15013525 - 15013416
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| ||| | |||||||||||||||||||||| ||||||||||||| |||||  ||    
T  15013525 ccccctcaaagccaacacaatgaaggtgttggaggttgcaatgaaggttaatcaaaggtcgcaatttaggcgactaggggcggaccgcaactaaggcaga 15013426  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  15013425 atttccaaca 15013416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 33879886 - 33879991
Alignment:
Q  5 ctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaattt 103  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| ||||| ||| |||||||||| |||| || ||||    
T  33879886 ctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggcaaaccaaaggtcgcaatttaggtgactaggggtggaccgcaataaaggcggtattt 33879985  T
Q  104 ccaaca 109  Q
    ||||||    
T  33879986 ccaaca 33879991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 33964369 - 33964264
Alignment:
Q  5 ctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaattt 103  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| ||||| ||| |||||||||| |||| || ||||    
T  33964369 ctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggcaaaccaaaggtcgcaatttaggtgactaggggtggaccgcaataaaggcggtattt 33964270  T
Q  104 ccaaca 109  Q
    ||||||    
T  33964269 ccaaca 33964264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 45264663 - 45264554
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| |||| |||| ||||||||||||||| | |||||||||||||| ||||  ||    
T  45264663 ccccctcaaagccaacacaatgaaggtgttggaggctgcaaagaaggcaaaccaaaggccgcaatttaggcgacaaggggcggaccgcaataaaggcaga 45264564  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  45264563 atttccaaca 45264554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 8520197 - 8520292
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaagg 95  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||| ||||| ||||  |||||||||||||    
T  8520197 ccccctcaaagccaacacaatgaaggggttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggtgactaggggcaaaccgcaattaagg 8520292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 4022229 - 4022340
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||||||||||||| ||| |  ||||| |||| |||| ||||||||||||||| | |||||||||||||| |||| | |    
T  4022229 ccccctcaaagccaacacaatgaaggtgttggaggttgcgacgaaggcaaaccaaaggccgcaatttaggcgacaaggggcggaccgcaataaaggcgaa 4022328  T
Q  100 atttccaacatt 111  Q
    ||||||||||||    
T  4022329 atttccaacatt 4022340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 2697435 - 2697544
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgact-agggcggaccgcaattaaggtgga 99  Q
    |||||||||||||  ||||||||||||||||||||||||||| ||| | |||| |||| | |||||||||||||| |||| |||||||||| |||| |||    
T  2697435 ccccctcaaagccgtcacaatgaaggtgttggaggctgcaatgaagacaaaccaaaggcctcaatttaggcgactaagggtggaccgcaataaaggcgga 2697534  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  2697535 atttccaaca 2697544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 43423279 - 43423232
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43423279 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatttaggc 43423232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 19459723 - 19459615
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactagggcggaccgcaattaaggtggaa 100  Q
    |||||||| | ||||||||||||||| |||||||||||||||| |||| | || || | ||||| | ||||  ||||||| |||  ||||||||| ||||    
T  19459723 ccccctcacacccaacacaatgaaggagttggaggctgcaatttaggcaacccaaatgccgcaagtaaggcagctagggcagacaccaattaaggcggaa 19459624  T
Q  101 tttccaaca 109  Q
    |||||||||    
T  19459623 tttccaaca 19459615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 41590346 - 41590439
Alignment:
Q  15 acacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactagg-gcggaccgcaattaaggtggaatttccaaca 109  Q
    |||||||||||||||||||||||||||| ||||| |||| ||   ||||| ||||||| ||||| |||||||||||| |||| ||||||| |||||    
T  41590346 acacaatgaaggtgttggaggctgcaatgaaggc-aacccaattccgcaa-ttaggcggctaggtgcggaccgcaatgaaggcggaattttcaaca 41590439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 14623196 - 14623160
Alignment:
Q  12 ccaacacaatgaaggtgttggaggctgcaattaaggc 48  Q
    ||||||||||||||||||||||||||||||| |||||    
T  14623196 ccaacacaatgaaggtgttggaggctgcaatgaaggc 14623160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 34626889 - 34626925
Alignment:
Q  12 ccaacacaatgaaggtgttggaggctgcaattaaggc 48  Q
    |||||| |||||||||||||||||||||||| |||||    
T  34626889 ccaacagaatgaaggtgttggaggctgcaatgaaggc 34626925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 37600820 - 37600788
Alignment:
Q  77 gggcggaccgcaattaaggtggaatttccaaca 109  Q
    ||||||||||||||||||| |||||||||||||    
T  37600820 gggcggaccgcaattaaggcggaatttccaaca 37600788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 51515703 - 51515667
Alignment:
Q  12 ccaacacaatgaaggtgttggaggctgcaattaaggc 48  Q
    ||||||||||||||||||||||||| ||||| |||||    
T  51515703 ccaacacaatgaaggtgttggaggcagcaatgaaggc 51515667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 9e-39; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 1409011 - 1408902
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||| | ||||||||||||||||||| |||    
T  1409011 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaagctaaccaaaggtcgcaatttaggcgacaaggggcggaccgcaattaaggcgga 1408912  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  1408911 atttccaaca 1408902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 24055213 - 24055322
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||| |||||||||||||||||||  ||    
T  24055213 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaagggcgcaatttaggcgactaggggcggaccgcaattaaggcaga 24055312  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  24055313 atttccaaca 24055322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 1744946 - 1745055
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactag-ggcggaccgcaattaaggtgga 99  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |||||||||| ||||||| |||    
T  1744946 ccccctcaaagcaaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcgactggaggcggaccgcgattaaggcgga 1745045  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  1745046 atttccaaca 1745055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 10418442 - 10418551
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||| ||||||||| ||||||||||||||||||| |||    
T  10418442 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaagatcgcaattaaggcgactaggggcggaccgcaattaaggcgga 10418541  T
Q  100 atttccaaca 109  Q
    | ||||||||    
T  10418542 aattccaaca 10418551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 10733542 - 10733651
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggg-cggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||| |||||||||||||||  |||||||||| ||||||||||||||||||||||||| ||||| |||||||||| |||    
T  10733542 ccccctcaaagccaacacaatgaagatgttggaggctgcaacgaaggctaaccaaaggtcgcaatttaggcgactagggacggactgcaattaaggcgga 10733641  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  10733642 atttccaaca 10733651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 21067161 - 21067270
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||| ||||||| ||||||| ||||||||||||||||||| |||    
T  21067161 ccccctcaaagcaaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcacaatttatgcgactaggggcggaccgcaattaaggcgga 21067260  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  21067261 atttccaaca 21067270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19054493 - 19054383
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||| |||| || ||||||||||| |||    
T  19054493 ccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaattaaggcgactaggggctgatcgcaattaaggcgga 19054394  T
Q  100 atttccaacat 110  Q
    |||| ||||||    
T  19054393 attttcaacat 19054383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 19753708 - 19753817
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||| |||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||| |||| |||| |||||||||||||| |||    
T  19753708 ccccctcaaagctaacacaatgaaggtgttgcaggctgcaataaaggctaaccaaaggtcgcaatttaggcaactaggggcagaccgcaattaaggcgga 19753807  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  19753808 atttccaaca 19753817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 21088952 - 21089061
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||||| |||||||||||||||||||  ||    
T  21088952 ccccctcaaagcaaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcacaattaaggcgactaggggcggaccgcaattaaggcaga 21089051  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  21089052 atttccaaca 21089061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 21043885 - 21043992
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||| ||||||| ||||||| |||||||||||||||||||  ||    
T  21043885 ccccctcaaagcaaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcacaatttatgcgactaggggcggaccgcaattaaggcaga 21043984  T
Q  100 atttccaa 107  Q
    ||||||||    
T  21043985 atttccaa 21043992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 22911279 - 22911385
Alignment:
Q  2 cccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||| |||| |||||||||||||||||||||| |||||||||| ||| |||||||||    
T  22911279 cccctcaaagccaacacaatgaaggtgttagaggctgtaatgaaggcaaaccaaaggtcgcaatttaggcgactaggggcggaccgtaataaaggtggaa 22911378  T
Q  101 tttccaa 107  Q
    |||||||    
T  22911379 tttccaa 22911385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 8144017 - 8143909
Alignment:
Q  2 cccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaa 100  Q
    |||||||||||||||||  |||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||| |||| |||||||||||||| ||||    
T  8144017 cccctcaaagccaacacgttgaaggtgttggaggctgcaatgaaggctaaccaaaggccgcaattaaggcgactaggggcagaccgcaattaaggcggaa 8143918  T
Q  101 tttccaaca 109  Q
    |||||||||    
T  8143917 tttccaaca 8143909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 22889673 - 22889779
Alignment:
Q  2 cccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||| |||| |||||||||||||||||||||| ||||| |||| ||| |||||||||    
T  22889673 cccctcaaagccaacacaatgaaggtgttagaggctgtaatgaaggcaaaccaaaggtcgcaatttaggcgactaggggcgaaccgtaataaaggtggaa 22889772  T
Q  101 tttccaa 107  Q
    |||||||    
T  22889773 tttccaa 22889779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 12134587 - 12134696
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||| |||||||||||||||||||||| |||||||||||||| ||||| |||| |||| ||||||||||| ||||| |||||||||  ||| |||| |||    
T  12134587 ccccgtcaaagccaacacaatgaaggtattggaggctgcaatgaaggcaaaccaaaggccgcaatttaggtgactaggggcggaccagaataaaggcgga 12134686  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  12134687 atttccaaca 12134696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 30539235 - 30539126
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||| |||||||||||| |||||||||| || |||| ||||| |||| ||||  |||||||||||||||| |||||||||||||| |||| |||    
T  30539235 ccccctcaaaaccaacacaatgatggtgttggagtctacaatgaaggcaaaccaaaggctgcaatttaggcgactaggggcggaccgcaataaaggcgga 30539136  T
Q  100 atttccaaca 109  Q
    ||||||||||    
T  30539135 atttccaaca 30539126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 22874948 - 22875056
Alignment:
Q  2 cccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaa 100  Q
    |||||||||||||||| |||||||||||| ||||||| ||| ||||| |||| |||||||||||||||||||||| |||| | ||| ||| |||||| ||    
T  22874948 cccctcaaagccaacataatgaaggtgttagaggctgtaatgaaggcaaaccaaaggtcgcaatttaggcgactaggggcaggccgtaataaaggtgaaa 22875047  T
Q  101 tttccaaca 109  Q
    |||||||||    
T  22875048 tttccaaca 22875056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 17096803 - 17096910
Alignment:
Q  2 cccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaa-ccgaaggtcgcaatttaggcgactaggg-cggaccgcaattaaggtgga 99  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||| || ||||| |||||||||||||||||||  |||||||| | |||| |||    
T  17096803 cccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaagctaacccaaaggttgcaatttaggcgactagggatggaccgcagtaaaggcgga 17096902  T
Q  100 atttccaa 107  Q
    | ||||||    
T  17096903 acttccaa 17096910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 28068523 - 28068626
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtgga 99  Q
    |||||||||||||| || || |||||| ||||||| |||||| |||||||||| |||||| ||||||||||||||| |||||||||||| |||||| |||    
T  28068523 ccccctcaaagccacca-aacgaaggttttggaggttgcaatgaaggctaaccaaaggtcacaatttaggcgactaggggcggaccgcatttaaggcgga 28068621  T
Q  100 atttc 104  Q
    |||||    
T  28068622 atttc 28068626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 32215904 - 32215798
Alignment:
Q  5 ctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactag-ggcggaccgcaattaaggtggaattt 103  Q
    |||||| |||||| |||||||||||||||||||||||| ||||| |||| |||  | ||||||| |||||||| | |||||| |||| |||  |||||||    
T  32215904 ctcaaaaccaacataatgaaggtgttggaggctgcaatgaaggcaaaccaaagacctcaatttaagcgactagagacggaccacaataaagacggaattt 32215805  T
Q  104 ccaacat 110  Q
    | |||||    
T  32215804 ctaacat 32215798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 31977 - 32084
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactagggcggaccgcaattaaggtggaa 100  Q
    ||||||||||||||||| |||||||||||||||| ||||||| ||||| |    || | ||||| ||||| ||||||||  |  |||||| |||||||||    
T  31977 ccccctcaaagccaacaaaatgaaggtgttggagactgcaatgaaggcaacttaaatgccgcaa-ttaggtgactaggggtggacgcaataaaggtggaa 32075  T
Q  101 tttccaaca 109  Q
    |||||||||    
T  32076 tttccaaca 32084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 1205981 - 1206076
Alignment:
Q  14 aacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaaca 109  Q
    ||||| ||||||||| ||||||||||||| ||||| | || || | ||||| ||||||| ||| |||||||||||||| ||||  ||||||||||||    
T  1205981 aacacgatgaaggtgctggaggctgcaatgaaggcaacccaaatgccgcaa-ttaggcggctaggggcggaccgcaatgaaggcagaatttccaaca 1206076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 9602102 - 9602200
Alignment:
Q  12 ccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaacat 110  Q
    |||||||||||||||||||||| |||| ||| ||||| | || || |  |||| ||||||| ||| |||| ||| ||||| |||||||||||||||||||    
T  9602102 ccaacacaatgaaggtgttggaagctggaatgaaggcaatccaaatgctgcaa-ttaggcggctaggggcagactgcaatgaaggtggaatttccaacat 9602200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 11132 - 11238
Alignment:
Q  2 cccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||| |||| |||||||||||||||||||||| ||||| |||| ||| |||||||||    
T  11132 cccctcaaagccaacacaatgaaggtgttagaggctgtaatgaaggcaaaccaaaggtcgcaatttaggcgactaggggcgtaccgtaataaaggtggaa 11231  T
Q  101 tttccaa 107  Q
    |||||||    
T  11232 tttccaa 11238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 30693 - 30582
Alignment:
Q  1 ccccctcaaagccaacacaatgaaggtgttggaggctgcaat-taaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaat-taaggtg 97  Q
    ||||||||||||||||||||||||||||||||| | ||||||  ||||  |||| || |||||||||||||||| || ||||||||||||||  ||||||    
T  30693 ccccctcaaagccaacacaatgaaggtgttggaagttgcaatggaaggtaaaccaaatgtcgcaatttaggcgattaggggcggaccgcaataaaaggtg 30594  T
Q  98 gaatttccaaca 109  Q
    ||||||| ||||    
T  30593 gaatttcgaaca 30582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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