View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15932_high_99 (Length: 241)
Name: NF15932_high_99
Description: NF15932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15932_high_99 |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 22757820 - 22757595
Alignment:
| Q |
1 |
ggagttagttaagaccttgctgaaggagtgagttcttggtcttggaggttcagcaggacaaggatcaaggcttgtaggctcagtttgctaagcaaatttg |
100 |
Q |
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| T |
22757820 |
ggagttagttaagaccttgctgaaggagtgagttcttggtcttggaggttcagcaggacaaggatcaaggcttgtaggctcagtttgctaagcaaatttg |
22757721 |
T |
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| Q |
101 |
gtccattagaaatccaaacaaatcaaagaaaagaatctaagtttgaccataaaaatatttaagaatcaagaagagaagctacaatcttacattagattct |
200 |
Q |
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| T |
22757720 |
gtccattagaaatccaaacaaattaaagaaaagaatctaagtttgaccataaaaatatttaagaatcaagaagagaagctacaatcttacattagattct |
22757621 |
T |
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| Q |
201 |
ggtaccagagttatctgcgcataaac |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
22757620 |
ggtaccagagttatctgcgcataaac |
22757595 |
T |
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Back To:
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Target: chr4 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 7076779 - 7076820
Alignment:
| Q |
186 |
cttacattagattctggtaccagagttatctgcgcataaact |
227 |
Q |
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| T |
7076779 |
cttacattagattctggtaccaaagtaatctgagcataaact |
7076820 |
T |
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