View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15932_low_120 (Length: 214)
Name: NF15932_low_120
Description: NF15932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15932_low_120 |
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Alignment Details
Target: chr2 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 10 - 194
Target Start/End: Complemental strand, 30411037 - 30410853
Alignment:
| Q |
10 |
catcatcattagcactgttctctgatgcaacctcctcctcttcacttgcattattctcagaatcttcattttcataattgacttgttgtgtagcatcaac |
109 |
Q |
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| T |
30411037 |
catcatcattagcactgttttctgatgcaacctcctcctcttcacttgcattattctcagaatcttcattttcataattgacttgttgtgtagcatcaac |
30410938 |
T |
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| Q |
110 |
aaattttgaaccattagtgcttccagaatcttcaatcattgttttaccttgattcagactttgtgccctgttactcaccttatga |
194 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
30410937 |
aaattttgaaccattagtgcttccagaatcttcaatcattgttttaccttgattcagactttgtgccctgttactcacctcatga |
30410853 |
T |
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