View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15932_low_19 (Length: 495)

Name: NF15932_low_19
Description: NF15932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15932_low_19
NF15932_low_19
[»] chr2 (36 HSPs)
chr2 (19-477)||(42838866-42839324)
chr2 (16-84)||(8832537-8832605)
chr2 (16-85)||(38216099-38216168)
chr2 (16-84)||(4027005-4027073)
chr2 (12-84)||(4533398-4533470)
chr2 (16-85)||(29774825-29774894)
chr2 (16-84)||(22898295-22898363)
chr2 (20-84)||(36501453-36501517)
chr2 (27-84)||(755649-755706)
chr2 (16-77)||(5516156-5516217)
chr2 (16-77)||(23956209-23956270)
chr2 (16-84)||(887492-887560)
chr2 (20-84)||(21788541-21788605)
chr2 (16-84)||(30382207-30382275)
chr2 (17-84)||(4004900-4004967)
chr2 (16-83)||(7480838-7480905)
chr2 (16-77)||(31165110-31165170)
chr2 (48-84)||(5903650-5903686)
chr2 (12-84)||(12950053-12950125)
chr2 (21-77)||(42064936-42064992)
chr2 (44-83)||(1120393-1120432)
chr2 (16-83)||(11777064-11777131)
chr2 (16-82)||(1768767-1768833)
chr2 (50-84)||(5903729-5903763)
chr2 (18-80)||(25836655-25836716)
chr2 (16-82)||(33321252-33321318)
chr2 (16-77)||(4090569-4090630)
chr2 (39-84)||(37420009-37420054)
chr2 (16-84)||(446507-446575)
chr2 (36-84)||(736064-736112)
chr2 (19-83)||(13056266-13056330)
chr2 (12-84)||(16108060-16108132)
chr2 (12-84)||(17546500-17546572)
chr2 (12-84)||(32366225-32366297)
chr2 (16-84)||(37409723-37409791)
chr2 (36-84)||(45163823-45163871)
[»] chr8 (41 HSPs)
chr8 (323-477)||(43911723-43911877)
chr8 (16-84)||(25333639-25333707)
chr8 (16-84)||(25465785-25465853)
chr8 (16-84)||(24087251-24087319)
chr8 (24-84)||(25671828-25671888)
chr8 (16-84)||(34286502-34286570)
chr8 (18-84)||(10213777-10213843)
chr8 (18-84)||(32212953-32213019)
chr8 (16-84)||(9131066-9131134)
chr8 (36-84)||(28879155-28879203)
chr8 (16-84)||(32975767-32975835)
chr8 (16-83)||(34338322-34338389)
chr8 (16-82)||(16972296-16972362)
chr8 (21-95)||(38338778-38338852)
chr8 (17-82)||(31079106-31079171)
chr8 (12-77)||(36907589-36907654)
chr8 (16-84)||(3641298-3641366)
chr8 (16-84)||(12607159-12607227)
chr8 (20-84)||(24350457-24350521)
chr8 (12-84)||(30974065-30974137)
chr8 (16-84)||(32131520-32131588)
chr8 (16-84)||(35055502-35055569)
chr8 (17-84)||(24866889-24866956)
chr8 (16-83)||(42363256-42363323)
chr8 (16-77)||(9130962-9131023)
chr8 (16-84)||(11988276-11988344)
chr8 (18-74)||(16926676-16926732)
chr8 (16-84)||(37410851-37410919)
chr8 (16-84)||(42102186-42102254)
chr8 (16-84)||(42667077-42667145)
chr8 (19-82)||(14942507-14942570)
chr8 (12-83)||(19925328-19925399)
chr8 (38-84)||(2669750-2669796)
chr8 (46-84)||(13131553-13131591)
chr8 (12-82)||(16706040-16706110)
chr8 (39-84)||(2019578-2019623)
chr8 (27-84)||(28280800-28280857)
chr8 (33-94)||(34545549-34545610)
chr8 (27-75)||(4326159-4326207)
chr8 (16-80)||(10298869-10298932)
chr8 (16-84)||(19925637-19925705)
[»] chr4 (63 HSPs)
chr4 (323-413)||(8633832-8633922)
chr4 (16-84)||(897050-897118)
chr4 (16-84)||(11256599-11256667)
chr4 (16-84)||(23297515-23297583)
chr4 (16-84)||(28074444-28074512)
chr4 (16-84)||(29877719-29877787)
chr4 (19-95)||(42153089-42153165)
chr4 (16-84)||(48591362-48591430)
chr4 (17-84)||(8130560-8130627)
chr4 (22-84)||(18630833-18630895)
chr4 (16-84)||(17222909-17222977)
chr4 (16-84)||(18424216-18424284)
chr4 (16-84)||(34526275-34526343)
chr4 (16-84)||(36254974-36255042)
chr4 (16-84)||(36740984-36741052)
chr4 (36-84)||(48667770-48667818)
chr4 (16-83)||(488323-488390)
chr4 (21-84)||(42617168-42617231)
chr4 (16-82)||(7148852-7148918)
chr4 (16-82)||(48687014-48687080)
chr4 (35-84)||(3564305-3564354)
chr4 (12-84)||(7396356-7396429)
chr4 (16-77)||(8601281-8601342)
chr4 (16-85)||(22273860-22273929)
chr4 (16-84)||(12495582-12495650)
chr4 (16-84)||(15179897-15179965)
chr4 (16-84)||(19414195-19414263)
chr4 (16-96)||(31022480-31022560)
chr4 (44-84)||(35405791-35405831)
chr4 (16-84)||(41228983-41229051)
chr4 (11-83)||(43699388-43699460)
chr4 (16-83)||(9153521-9153588)
chr4 (36-83)||(38345761-38345808)
chr4 (16-78)||(825762-825824)
chr4 (12-94)||(2702643-2702725)
chr4 (17-78)||(9319129-9319190)
chr4 (16-77)||(10046312-10046373)
chr4 (16-81)||(23335722-23335787)
chr4 (16-77)||(34633470-34633531)
chr4 (39-84)||(38876060-38876105)
chr4 (12-84)||(4331406-4331478)
chr4 (16-84)||(28663653-28663720)
chr4 (16-83)||(11679066-11679133)
chr4 (16-83)||(11687345-11687412)
chr4 (16-83)||(15184626-15184693)
chr4 (33-84)||(30956781-30956832)
chr4 (12-63)||(33534004-33534055)
chr4 (17-84)||(41071431-41071498)
chr4 (22-84)||(3966815-3966877)
chr4 (22-84)||(11298668-11298730)
chr4 (18-84)||(14987538-14987604)
chr4 (36-74)||(42611817-42611855)
chr4 (16-78)||(948153-948217)
chr4 (35-84)||(7206516-7206565)
chr4 (19-84)||(22117436-22117501)
chr4 (49-82)||(23297435-23297468)
chr4 (36-77)||(24101885-24101926)
chr4 (16-77)||(40699440-40699501)
chr4 (16-84)||(4603270-4603338)
chr4 (194-246)||(8633582-8633634)
chr4 (12-84)||(22397243-22397315)
chr4 (16-84)||(39931482-39931550)
chr4 (16-84)||(47202905-47202973)
[»] chr5 (55 HSPs)
chr5 (16-83)||(24030294-24030361)
chr5 (16-83)||(27805995-27806062)
chr5 (16-78)||(28357221-28357283)
chr5 (16-82)||(42852101-42852167)
chr5 (11-83)||(2878616-2878688)
chr5 (16-84)||(5559857-5559925)
chr5 (20-84)||(13625458-13625522)
chr5 (16-84)||(28625560-28625628)
chr5 (16-95)||(1943075-1943154)
chr5 (16-84)||(10537164-10537233)
chr5 (19-84)||(41059727-41059792)
chr5 (16-77)||(41419581-41419642)
chr5 (12-84)||(6125362-6125434)
chr5 (12-84)||(6144814-6144886)
chr5 (34-82)||(17868144-17868192)
chr5 (16-84)||(40697086-40697154)
chr5 (16-95)||(35536925-35537003)
chr5 (16-78)||(17657322-17657384)
chr5 (14-84)||(29922127-29922197)
chr5 (22-84)||(40452415-40452477)
chr5 (21-78)||(13060546-13060603)
chr5 (16-77)||(43268581-43268642)
chr5 (36-84)||(39154699-39154747)
chr5 (20-84)||(41125758-41125822)
chr5 (16-83)||(29136765-29136832)
chr5 (17-84)||(29659141-29659208)
chr5 (22-84)||(2577366-2577428)
chr5 (16-77)||(7364254-7364315)
chr5 (16-65)||(11163239-11163288)
chr5 (36-81)||(35083339-35083384)
chr5 (16-84)||(1868926-1868989)
chr5 (27-83)||(3977564-3977620)
chr5 (16-84)||(11912040-11912108)
chr5 (16-84)||(15167652-15167720)
chr5 (16-84)||(20458496-20458564)
chr5 (33-83)||(589249-589300)
chr5 (17-84)||(9477417-9477484)
chr5 (16-83)||(11991384-11991451)
chr5 (18-84)||(12467347-12467416)
chr5 (17-84)||(29418690-29418757)
chr5 (12-82)||(15414068-15414138)
chr5 (19-77)||(28357435-28357493)
chr5 (46-84)||(42558655-42558693)
chr5 (39-84)||(13739332-13739377)
chr5 (38-75)||(15364103-15364140)
chr5 (16-84)||(22201869-22201938)
chr5 (31-84)||(38461218-38461271)
chr5 (20-65)||(38498652-38498697)
chr5 (16-81)||(43265873-43265938)
chr5 (44-84)||(3520445-3520485)
chr5 (16-84)||(5203372-5203440)
chr5 (16-84)||(15709830-15709898)
chr5 (16-84)||(26003077-26003145)
chr5 (19-75)||(29658002-29658058)
chr5 (44-84)||(33924720-33924760)
[»] chr1 (55 HSPs)
chr1 (12-84)||(10365246-10365318)
chr1 (16-84)||(37329350-37329418)
chr1 (16-84)||(48819379-48819447)
chr1 (16-95)||(37712147-37712226)
chr1 (16-82)||(22593347-22593413)
chr1 (16-84)||(391255-391324)
chr1 (16-81)||(6337697-6337762)
chr1 (16-84)||(10850004-10850072)
chr1 (16-84)||(15515285-15515353)
chr1 (16-84)||(26988228-26988296)
chr1 (16-84)||(35897557-35897625)
chr1 (16-83)||(46500939-46501007)
chr1 (33-84)||(47413469-47413520)
chr1 (22-84)||(9572722-9572784)
chr1 (16-77)||(36259236-36259297)
chr1 (16-84)||(4068195-4068263)
chr1 (16-84)||(15791463-15791531)
chr1 (16-84)||(17628363-17628431)
chr1 (16-84)||(17814270-17814338)
chr1 (44-84)||(28690112-28690152)
chr1 (16-84)||(32497210-32497278)
chr1 (16-84)||(42591462-42591530)
chr1 (22-84)||(13039033-13039095)
chr1 (16-82)||(41196650-41196716)
chr1 (19-84)||(28870286-28870351)
chr1 (16-84)||(5347234-5347302)
chr1 (16-84)||(8410213-8410281)
chr1 (16-84)||(19395854-19395922)
chr1 (16-84)||(22103189-22103257)
chr1 (18-74)||(38781160-38781216)
chr1 (20-84)||(46689488-46689552)
chr1 (20-84)||(28122700-28122766)
chr1 (12-75)||(37156867-37156930)
chr1 (33-84)||(37431231-37431282)
chr1 (16-84)||(45267546-45267610)
chr1 (16-83)||(50919567-50919634)
chr1 (16-82)||(3069794-3069860)
chr1 (16-78)||(12871420-12871481)
chr1 (16-74)||(16888914-16888972)
chr1 (44-82)||(23544899-23544937)
chr1 (17-79)||(26543054-26543116)
chr1 (29-83)||(52363811-52363865)
chr1 (39-84)||(19220276-19220321)
chr1 (13-82)||(20169341-20169410)
chr1 (12-77)||(35275843-35275908)
chr1 (39-84)||(42367053-42367098)
chr1 (16-84)||(1005420-1005488)
chr1 (16-84)||(3116000-3116068)
chr1 (16-84)||(5243342-5243410)
chr1 (20-84)||(9575412-9575476)
chr1 (20-84)||(12828208-12828272)
chr1 (16-83)||(35590210-35590278)
chr1 (16-84)||(41130074-41130142)
chr1 (20-80)||(41576337-41576397)
chr1 (17-65)||(49822817-49822865)
[»] chr7 (37 HSPs)
chr7 (16-84)||(29378725-29378793)
chr7 (17-84)||(33204915-33204982)
chr7 (16-83)||(34923013-34923080)
chr7 (18-84)||(38372640-38372706)
chr7 (16-84)||(25908374-25908442)
chr7 (16-84)||(29390489-29390557)
chr7 (16-84)||(33288013-33288081)
chr7 (17-84)||(22032843-22032910)
chr7 (16-79)||(46744033-46744096)
chr7 (39-84)||(26331868-26331913)
chr7 (20-84)||(14691237-14691301)
chr7 (16-84)||(16932868-16932936)
chr7 (16-84)||(16938251-16938319)
chr7 (16-84)||(16958895-16958963)
chr7 (36-84)||(44613411-44613459)
chr7 (17-84)||(43818816-43818883)
chr7 (17-84)||(47654352-47654419)
chr7 (38-83)||(28004685-28004730)
chr7 (16-84)||(39279509-39279578)
chr7 (16-84)||(991579-991647)
chr7 (36-84)||(1401173-1401221)
chr7 (16-84)||(16012778-16012846)
chr7 (20-84)||(19914029-19914093)
chr7 (16-84)||(20888654-20888722)
chr7 (16-84)||(23137101-23137169)
chr7 (36-80)||(30181650-30181694)
chr7 (27-83)||(32358700-32358756)
chr7 (16-84)||(35246749-35246817)
chr7 (36-84)||(37465824-37465872)
chr7 (36-84)||(47511145-47511193)
chr7 (14-84)||(22515480-22515550)
chr7 (16-82)||(27811425-27811491)
chr7 (38-84)||(30094667-30094713)
chr7 (12-65)||(18251481-18251534)
chr7 (12-84)||(32848606-32848679)
chr7 (12-84)||(1312189-1312261)
chr7 (16-84)||(22575666-22575734)
[»] chr3 (39 HSPs)
chr3 (16-84)||(40240515-40240583)
chr3 (18-84)||(40581014-40581080)
chr3 (16-84)||(53261705-53261774)
chr3 (21-81)||(3845939-3845999)
chr3 (16-84)||(17752069-17752137)
chr3 (16-84)||(19053389-19053457)
chr3 (12-84)||(20174878-20174950)
chr3 (12-84)||(38524164-38524236)
chr3 (16-75)||(42956126-42956185)
chr3 (23-77)||(27769736-27769790)
chr3 (39-84)||(46573392-46573437)
chr3 (12-84)||(4974387-4974459)
chr3 (16-84)||(30321668-30321735)
chr3 (20-84)||(33946488-33946552)
chr3 (16-84)||(34707651-34707719)
chr3 (16-84)||(43079872-43079940)
chr3 (17-84)||(52895343-52895410)
chr3 (20-77)||(10449061-10449118)
chr3 (16-81)||(45331236-45331301)
chr3 (12-77)||(48816791-48816856)
chr3 (16-84)||(3645382-3645450)
chr3 (36-84)||(3876201-3876249)
chr3 (16-84)||(21720987-21721055)
chr3 (20-84)||(25341354-25341418)
chr3 (16-84)||(29614273-29614341)
chr3 (16-95)||(48597793-48597873)
chr3 (16-64)||(53217998-53218046)
chr3 (16-83)||(29830578-29830645)
chr3 (13-84)||(36638841-36638912)
chr3 (17-84)||(43376776-43376843)
chr3 (16-77)||(22809138-22809199)
chr3 (12-74)||(36182580-36182642)
chr3 (16-77)||(1516043-1516104)
chr3 (16-65)||(37778213-37778262)
chr3 (16-84)||(20685865-20685933)
chr3 (20-84)||(32901086-32901150)
chr3 (39-83)||(32983230-32983274)
chr3 (36-84)||(37243566-37243614)
chr3 (36-84)||(43069138-43069186)
[»] chr6 (36 HSPs)
chr6 (20-83)||(12817047-12817110)
chr6 (16-82)||(9201661-9201727)
chr6 (18-84)||(10755221-10755287)
chr6 (16-78)||(10874064-10874126)
chr6 (16-84)||(8014868-8014936)
chr6 (16-84)||(9764329-9764397)
chr6 (16-84)||(23239327-23239395)
chr6 (36-84)||(35071366-35071414)
chr6 (36-82)||(3210929-3210975)
chr6 (16-82)||(10687390-10687456)
chr6 (15-84)||(12816839-12816909)
chr6 (34-84)||(34510009-34510059)
chr6 (16-84)||(6758707-6758776)
chr6 (16-84)||(6752892-6752960)
chr6 (16-84)||(9202337-9202405)
chr6 (16-84)||(32165199-32165267)
chr6 (16-84)||(32675827-32675895)
chr6 (44-83)||(21025158-21025197)
chr6 (22-84)||(29623416-29623477)
chr6 (16-81)||(2034170-2034235)
chr6 (36-84)||(2027114-2027162)
chr6 (12-84)||(8010983-8011054)
chr6 (12-84)||(9894851-9894923)
chr6 (36-84)||(21891276-21891324)
chr6 (16-83)||(2255814-2255881)
chr6 (16-82)||(6958704-6958770)
chr6 (18-84)||(10184268-10184334)
chr6 (12-74)||(21609997-21610059)
chr6 (16-82)||(22708366-22708432)
chr6 (14-75)||(24419479-24419540)
chr6 (36-77)||(30534052-30534093)
chr6 (16-84)||(1189463-1189531)
chr6 (44-84)||(3832267-3832307)
chr6 (16-84)||(17915025-17915093)
chr6 (16-84)||(32615353-32615421)
chr6 (16-80)||(35111292-35111356)
[»] scaffold0332 (1 HSPs)
scaffold0332 (13-75)||(14693-14755)
[»] scaffold0512 (1 HSPs)
scaffold0512 (16-84)||(4144-4212)
[»] scaffold0048 (1 HSPs)
scaffold0048 (16-83)||(58807-58874)
[»] scaffold0015 (1 HSPs)
scaffold0015 (36-82)||(48568-48614)
[»] scaffold0157 (1 HSPs)
scaffold0157 (16-84)||(24827-24895)
[»] scaffold0100 (1 HSPs)
scaffold0100 (21-84)||(38391-38454)
[»] scaffold0004 (2 HSPs)
scaffold0004 (12-82)||(227783-227853)
scaffold0004 (16-84)||(242578-242646)
[»] scaffold1367 (1 HSPs)
scaffold1367 (16-84)||(1138-1206)
[»] scaffold0291 (1 HSPs)
scaffold0291 (16-84)||(19635-19703)
[»] scaffold0057 (1 HSPs)
scaffold0057 (20-84)||(24327-24391)


Alignment Details
Target: chr2 (Bit Score: 455; Significance: 0; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 19 - 477
Target Start/End: Complemental strand, 42839324 - 42838866
Alignment:
Q  19 caattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttcgaaatctcaaatttaaaaggaattactgatacaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42839324 caattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttcgaaatctcaaatttaaaaggaattactgatacaa 42839225  T
Q  119 atttaattaacaaggcttcctttttattttctctaaatgaatttagctctcaaataaaatttgaaaaactcatccatctttcaacataaagaaagagaaa 218  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42839224 atttaattaacaaggcttccttttttttttctctaaatgaatttagctctcaaataaaatttgaaaaactcatccatctttcaacataaagaaagagaaa 42839125  T
Q  219 cgagaaaatagcacaaactaaaaatggttgaaatgaaaggtcaaaatactgcttttttccttcagctttataaaggaacgttccctacatcattgcagag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42839124 cgagaaaatagcacaaactaaaaatggttgaaatgaaaggtcaaaatactgcttttttccttcagctttataaaggaacgttccctacatcattgcagag 42839025  T
Q  319 gtagttgtttgagcagcaacactagagtctagctccatagcagaagctctggaaggtgatgctggctgcacctccacatctggataagctgccttaaacc 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42839024 gtagttgtttgagcagcaacactagagtctagctccatagcagaagctctggaaggtgatgctggctgcacctccacatctggataagctgccttaaacc 42838925  T
Q  419 ttgctctcagcccttcatccactaaccttacaccactcaattgattaccaagagacatc 477  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42838924 ttgctctcagcccttcatccactaaccttacaccactcaattgattaccaagagacatc 42838866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 8832537 - 8832605
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  8832537 atacaattttcgttagtgaaaacttatgaattaacataaaagcttatttatttgcataagctatttttc 8832605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 38216099 - 38216168
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttcg 85  Q
    |||||||||||||||| || ||||||| | |||||||||||||||||||| |||||||||||||||||||    
T  38216099 atacaattttcgttagtgagaacttatgagttaacataaaagcttatttatttgcataagctatttttcg 38216168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 4027005 - 4027073
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| ||||| || ||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  4027005 atacaatttttgttagtgagaacttatgaattaacataatagcttatttatttgcataagctatttttc 4027073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 4533398 - 4533470
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||| ||||| || ||||||| ||||| |||| ||||||||||| ||||||||||||||||||    
T  4533398 gaatatacaatttttgttagtgacaacttatgaattagcatagaagcttatttatttgcataagctatttttc 4533470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 29774825 - 29774894
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttcg 85  Q
    |||||||||||||||| || ||||||| ||||||| |||||||||||||| |||| ||| ||||||||||    
T  29774825 atacaattttcgttagtgagaacttatgaattaacgtaaaagcttatttatttgcttaaactatttttcg 29774894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 22898363 - 22898295
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||  |||||||||  ||||| ||||||||||||||| || |||||||||||||||    
T  22898363 atacaattttcgttagtcaaaacttatagattaaaataaaagcttatttatttacataagctatttttc 22898295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 36501517 - 36501453
Alignment:
Q  20 aattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||| |||||| || |||| || |||||||||||||||||||||| ||||||||||||||||||    
T  36501517 aatttgcgttagtgagaactcatgaattaacataaaagcttatttatttgcataagctatttttc 36501453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 755706 - 755649
Alignment:
Q  27 gttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||| |||| || ||||||||||||||||| |||| ||||||||||||||||||    
T  755706 gttagagagaactaatgaattaacataaaagcttctttatttgcataagctatttttc 755649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 5516156 - 5516217
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    |||||||||||||||| || | ||||| |||||||| ||||||||||||| |||||||||||    
T  5516156 atacaattttcgttagtgagagcttataaattaacacaaaagcttatttatttgcataagct 5516217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 23956270 - 23956209
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    |||||||||||||||  || ||||||| ||||||||||||| |||||||| |||||||||||    
T  23956270 atacaattttcgttaatgagaacttataaattaacataaaaacttatttatttgcataagct 23956209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 887492 - 887560
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||| ||||  | ||||||| ||||||||||||||||||| || ||||||||||| ||||||    
T  887492 atacaattttcattagcaagaacttatgaattaacataaaagcttatctatttgcataagctgtttttc 887560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 21788541 - 21788605
Alignment:
Q  20 aattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||| || | ||||| |||||| ||||||||||||||| ||||||||| ||||||||    
T  21788541 aattttcgttagtgagagcttatgaattaatataaaagcttatttatttgcataagttatttttc 21788605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 30382275 - 30382207
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| |||| ||||| |||||| | ||||||||||||| || ||||| |||||||||    
T  30382275 atacaattttcgttagtgaaagcttataaattaaaacaaaagcttatttatttacataatctatttttc 30382207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 4004900 - 4004967
Alignment:
Q  17 tacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||| || ||||||| |||||  |||||||||| ||||  |||||||||||||||||    
T  4004900 tacaattttcgttagtgagaacttatgaattactataaaagcttttttatctgcataagctatttttc 4004967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 7480905 - 7480838
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    ||||||||||| ||||  | ||||||| ||||||||||||| |||||||| |||||||| ||||||||    
T  7480905 atacaattttcattagtcagaacttatgaattaacataaaaacttatttatttgcataatctattttt 7480838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 31165110 - 31165170
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    ||||| |||||||||| | |||||||| ||||||||||||| |||||||| |||||||||||    
T  31165110 atacatttttcgttagtggaaacttataaattaacataaaa-cttatttatttgcataagct 31165170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 5903650 - 5903686
Alignment:
Q  48 aacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||||| ||||||||||||||||||    
T  5903650 aacataaaagcttatttatttgcataagctatttttc 5903686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 12950125 - 12950053
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| ||||||||||||  | | ||||| |||||||||||||||||| ||| ||||||| ||| ||||||    
T  12950125 gaatatagaattttcgttagtaagatcttatgaattaacataaaagcttaattatttgcatatgctctttttc 12950053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 42064936 - 42064992
Alignment:
Q  21 attttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    |||||||||||  | ||||||| |||||| ||||||||||||||| |||||||||||    
T  42064936 attttcgttagtaagaacttatgaattaatataaaagcttatttatttgcataagct 42064992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 83
Target Start/End: Original strand, 1120393 - 1120432
Alignment:
Q  44 aattaacataaaagcttatttaattgcataagctattttt 83  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  1120393 aattaacataaaagattatttatttgcataagctattttt 1120432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 11777064 - 11777131
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    ||||| |||| ||||| || ||||||| || |||||||||| |||||||| ||||| |||||||||||    
T  11777064 atacactttttgttagtgagaacttataaactaacataaaaccttatttatttgcagaagctattttt 11777131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 1768833 - 1768767
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    |||||||||||||||   | ||||||| ||||||| ||||| |||||||| ||||||||||| ||||    
T  1768833 atacaattttcgttactcagaacttataaattaacctaaaaacttatttatttgcataagctgtttt 1768767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 84
Target Start/End: Original strand, 5903729 - 5903763
Alignment:
Q  50 cataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| ||||||||||||||||||    
T  5903729 cataaaagcttatttatttgcataagctatttttc 5903763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 25836716 - 25836655
Alignment:
Q  18 acaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatt 80  Q
    |||||| ||||||| || ||||||| ||| |||||||||||||||||| ||||||||| ||||    
T  25836716 acaattatcgttagtgagaacttatgaat-aacataaaagcttatttatttgcataaggtatt 25836655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 33321318 - 33321252
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    |||||||||| ||||| || | ||| | |||||||||||| | ||||||| ||||||||||||||||    
T  33321318 atacaatttttgttagtgagagcttgtgaattaacataaaggtttatttatttgcataagctatttt 33321252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 4090569 - 4090630
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    |||||||||||||||  || ||||||| |||||||| || | |||||||| |||||||||||    
T  4090569 atacaattttcgttaccgagaacttatgaattaacacaacaacttatttatttgcataagct 4090630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 37420009 - 37420054
Alignment:
Q  39 ttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||| |||||||||||||||||||||| ||||||||  ||||||||    
T  37420009 ttatgaattaacataaaagcttatttatttgcataaattatttttc 37420054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 446507 - 446575
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || | ||||| |||||| ||||||||||| ||| || |||||  ||||||||    
T  446507 atacaattttcgttagtgagagcttataaattaaaataaaagcttacttatttacataaattatttttc 446575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 736064 - 736112
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| ||||||||||||| ||||||||  | |||||||||||||||    
T  736064 aacttataaattaacataaaaacttatttatatacataagctatttttc 736112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 13056330 - 13056266
Alignment:
Q  19 caattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    ||||||||||||  || ||||||| ||||||||| ||||||||| || ||| |||| ||||||||    
T  13056330 caattttcgttaacgagaacttatgaattaacattaaagcttatctatttgtataaactattttt 13056266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 16108132 - 16108060
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||| ||||   ||| ||||| |||||||||||| ||||| ||| || |||||||| ||||||    
T  16108132 gaatatacaatttttgttaattaaatcttatgaattaacataaacgcttaattatttacataagctctttttc 16108060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 17546500 - 17546572
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||  ||||||||||| |||||||||| || ||||||||||  ||||||| || |||||  ||||||||    
T  17546500 gaatatatcattttcgttagtgaaaacttataaactaacataaaaatttatttatttacataaattatttttc 17546572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 32366225 - 32366297
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||| |||||||||||  | | ||||| || ||| | ||||||||||||| || |||||||||||||||    
T  32366225 gaatatacgattttcgttagtaagagcttataaaataaaacaaaagcttatttatttacataagctatttttc 32366297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 37409723 - 37409791
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| ||||  ||||||||   ||||||||||||| |||| ||| ||| ||||||||||||||    
T  37409723 atacaatttttgttattgaaaacttcgaaattaacataaaatcttagttacttgtataagctatttttc 37409791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 45163871 - 45163823
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| |||| |||| ||||||||||||  |||||||||||||||||    
T  45163871 aacttatgaattgacatgaaagcttatttatctgcataagctatttttc 45163823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 2e-65; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 323 - 477
Target Start/End: Original strand, 43911723 - 43911877
Alignment:
Q  323 ttgtttgagcagcaacactagagtctagctccatagcagaagctctggaaggtgatgctggctgcacctccacatctggataagctgccttaaaccttgc 422  Q
    |||||||| |||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43911723 ttgtttgaacagcaacactggagtctacctccatagcagaagctctgggaggtgatgctggctgcacctccacatctggataagctgccttaaaccttgc 43911822  T
Q  423 tctcagcccttcatccactaaccttacaccactcaattgattaccaagagacatc 477  Q
     | |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43911823 ccgcagcccttcatccactaaccttacaccactcaattgattacccagagacatc 43911877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 25333707 - 25333639
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||| || |||||||||||||||    
T  25333707 atacaattttcgttagtgaaaacttatgaattaacataaaagcttatttatttacataagctatttttc 25333639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 25465853 - 25465785
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| ||||  |||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  25465853 atacaatttttgttactgaaaacttatgaattaacataaaagcttatttatttgcataagctatttttc 25465785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 24087251 - 24087319
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||| ||||||||||  |||||||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  24087251 ataccattttcgttaatgaaaacttataaattaaaataaaagcttatttatttgcataagctatttttc 24087319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 25671888 - 25671828
Alignment:
Q  24 ttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||| |||||||||| |||||||||||||||||||||| || |||||||||||||||    
T  25671888 ttcgttagtgaaaacttataaattaacataaaagcttatttatttacataagctatttttc 25671828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 34286570 - 34286502
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || ||||||| |||||| ||||||||||||||| |||||||| |||||||||    
T  34286570 atacaattttcgttagggagaacttatgaattaatataaaagcttatttatttgcataacctatttttc 34286502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 10213777 - 10213843
Alignment:
Q  18 acaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||| ||||| || ||||||| |||||||||| ||||||||||| ||||||||||||||||||    
T  10213777 acaatttttgttagtgagaacttatgaattaacatacaagcttatttatttgcataagctatttttc 10213843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 32213019 - 32212953
Alignment:
Q  18 acaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||| |||| || ||||||| || ||||||||||||||||||| ||||||||||||||||||    
T  32213019 acaattttcattagtgagaacttataaaataacataaaagcttatttatttgcataagctatttttc 32212953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 9131134 - 9131066
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||    ||||||| |||||||||||||| ||||||| ||||||||||||||||||    
T  9131134 atacaattttcgttagtcggaacttatgaattaacataaaagtttatttatttgcataagctatttttc 9131066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 28879155 - 28879203
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  28879155 aacttatgaattaacataaaagcttatttatttgcataagctatttttc 28879203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 32975767 - 32975835
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| ||| | || ||||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  32975767 atacaatttttgtttgtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttc 32975835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 34338389 - 34338322
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    ||||||||||||||||  |||||||||  ||||||||||||||||||||  |||||||||||| ||||    
T  34338389 atacaattttcgttagttaaaacttatagattaacataaaagcttatttttttgcataagctaatttt 34338322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 16972362 - 16972296
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    |||||||||||||||| || ||||||| ||| || ||||||| ||||||| ||||||||||||||||    
T  16972362 atacaattttcgttagtgataacttatgaatcaatataaaagtttatttatttgcataagctatttt 16972296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 38338852 - 38338778
Alignment:
Q  21 attttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttcgaaatctcaaa 95  Q
    ||||||||||| || ||||||| |||||| |||||| |||||||| || |||||||||||||||  |||||||||    
T  38338852 attttcgttagtgagaacttataaattaaaataaaaacttatttatttacataagctatttttcataatctcaaa 38338778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 31079171 - 31079106
Alignment:
Q  17 tacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    ||||||||||| ||| |||||||||| |||||| |||||| |||||||| ||||||||||| ||||    
T  31079171 tacaattttcgatagtgaaaacttatgaattaagataaaaacttatttatttgcataagctctttt 31079106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 36907654 - 36907589
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    ||||||||||||||||||||  | | ||||| ||||| |||||||||||||||| |||||||||||    
T  36907654 gaatatacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagct 36907589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 3641298 - 3641366
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| |||||||| |||||||| | ||||||||||||| ||| |||||||| |||| |||||||||    
T  3641298 atacaatgttcgttagtgaaaacttgtaaattaacataaaaacttctttaattgtataaactatttttc 3641366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 12607159 - 12607227
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||| |||||| || | ||||| |||||| ||||||||||||||| || |||||||||||||||    
T  12607159 atacaatttccgttagtgagagcttataaattaaaataaaagcttatttatttacataagctatttttc 12607227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 24350521 - 24350457
Alignment:
Q  20 aattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||  | ||||||| ||||||||||||| |||||||| |||||||||||| |||||    
T  24350521 aattttcgttagtaagaacttatgaattaacataaaatcttatttatttgcataagctagttttc 24350457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 30974065 - 30974137
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||| |||||||||||||||  | | ||||| ||||| |||||||||||||||| ||||||||||| ||||||    
T  30974065 gaatttacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagctctttttc 30974137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 32131520 - 32131588
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||  ||| || ||||||| ||||||||||||||||||| || |||||||| |||||||||    
T  32131520 atacaattttcaatagtgagaacttatgaattaacataaaagcttatctatttgcataaactatttttc 32131588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 35055502 - 35055569
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || | ||||| |||||| ||||||||||||||| || |||||||||||||||    
T  35055502 atacaattttcgttagtgagagcttatgaattaa-ataaaagcttatttatttacataagctatttttc 35055569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 24866956 - 24866889
Alignment:
Q  17 tacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||  || ||||||| |||||| |||||| |||||||| ||||||||||| ||||||    
T  24866956 tacaattttcgttatcgagaacttataaattaagataaaaacttatttatttgcataagctctttttc 24866889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 42363323 - 42363256
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    |||||||||| ||||| || ||||| | |||||| ||||||||||||||| || ||||||||||||||    
T  42363323 atacaatttttgttagtgagaacttttaaattaaaataaaagcttatttatttacataagctattttt 42363256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 9131023 - 9130962
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    ||||||||||||||||    ||||||| |||||||||||||| ||||||| |||||||||||    
T  9131023 atacaattttcgttagtcggaacttatgaattaacataaaagtttatttatttgcataagct 9130962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 11988276 - 11988344
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || | ||||| |||||| |||||||| |||||| || |||||| ||||||||    
T  11988276 atacaattttcgttagtgagagcttataaattaaaataaaagcatatttatttacataagttatttttc 11988344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 16926732 - 16926676
Alignment:
Q  18 acaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataa 74  Q
    ||||||| |||||| || ||||||| ||||||||||||| |||||||| ||||||||    
T  16926732 acaatttccgttagtgagaacttataaattaacataaaaacttatttatttgcataa 16926676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 37410919 - 37410851
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||  | ||||||| |||||| ||| || |||||||| || |||||||||||||||    
T  37410919 atacaattttcgttagtaagaacttataaattaaaatataaacttatttatttacataagctatttttc 37410851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 42102186 - 42102254
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||  || |  |||| |||||| ||||||||||||||| || |||||||||||||||    
T  42102186 atacaattttcgttaatgagaggttataaattaaaataaaagcttatttatttacataagctatttttc 42102254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 42667077 - 42667145
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||| |||||||  ||||||||| |||||| ||||||| ||||||| || | |||||||||||||    
T  42667077 atacaattctcgttagtaaaaacttataaattaaaataaaagtttatttatttacgtaagctatttttc 42667145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 14942507 - 14942570
Alignment:
Q  19 caattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    ||||||| |||||  | ||||||| ||||||||||||| |||||||| ||||| ||||||||||    
T  14942507 caatttttgttagcaagaacttataaattaacataaaaccttatttatttgcaaaagctatttt 14942570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 19925399 - 19925328
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    ||||||||||||||||||||  | |  |||| |||||||||||||||||| ||| ||| ||||||| |||||    
T  19925399 gaatatacaattttcgttagtaagatattatgaattaacataaaagcttaattatttgtataagctcttttt 19925328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 2669750 - 2669796
Alignment:
Q  38 cttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||| |||||||||||||||||||||| || |||||||| ||||||    
T  2669750 cttatgaattaacataaaagcttatttattttcataagctctttttc 2669796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 13131553 - 13131591
Alignment:
Q  46 ttaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  13131553 ttaacataaaagcttatttatttgcatatgctatttttc 13131591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 16706110 - 16706040
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    |||||||||| |||| |||  || || |||| ||||||||||||||| |||||| ||||||||||| ||||    
T  16706110 gaatatacaactttcattaacgagaatttataaattaacataaaagcgtatttatttgcataagctgtttt 16706040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 2019623 - 2019578
Alignment:
Q  39 ttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||| |||||||||||||||||||||| ||||| ||| ||||||||    
T  2019623 ttatgaattaacataaaagcttatttatttgcacaaggtatttttc 2019578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 28280800 - 28280857
Alignment:
Q  27 gttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||| || ||||||| |||||| |||||| |||||||| ||||||||||| ||||||    
T  28280800 gttagtgagaacttatgaattaagataaaaacttatttatttgcataagctctttttc 28280857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 34545610 - 34545549
Alignment:
Q  33 gaaaacttatcaattaacataaaagcttatttaattgcataagctatttttcgaaatctcaa 94  Q
    |||||||||| ||||||||||||| |||||||| ||  ||||||| ||||||| || |||||    
T  34545610 gaaaacttataaattaacataaaaacttatttatttatataagctctttttcgtaagctcaa 34545549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 4326207 - 4326159
Alignment:
Q  27 gttagagaaaacttatcaattaacataaaagcttatttaattgcataag 75  Q
    ||||| ||||| |||| |||||||||||||| ||||||| |||||||||    
T  4326207 gttagtgaaaatttataaattaacataaaagtttatttatttgcataag 4326159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 10298932 - 10298869
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatt 80  Q
    |||||||||| ||||  || ||||||| ||||||||||||||| ||| || ||||||||||||||    
T  10298932 atacaatttttgttaatgagaacttatgaattaacataaaagc-tatctatttgcataagctatt 10298869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 19925637 - 19925705
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || | ||||  |||||| |||||  |||||||| || |||||||||||||||    
T  19925637 atacaattttcgttagtgagagcttacaaattaaaataaatacttatttatttacataagctatttttc 19925705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 9e-25; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 323 - 413
Target Start/End: Original strand, 8633832 - 8633922
Alignment:
Q  323 ttgtttgagcagcaacactagagtctagctccatagcagaagctctggaaggtgatgctggctgcacctccacatctggataagctgcctt 413  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||   ||||||||||||||||||||||||||||  ||||||||||||    
T  8633832 ttgtttgagcagcaacactagagtctacttccatagaagaagctctaagaggtgatgctggctgcacctccacatctaaataagctgcctt 8633922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 897050 - 897118
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||| ||||||||||| |||||||||| |||||| ||||||||||||||| |||||||| |||||||||    
T  897050 atacgattttcgttagtgaaaacttataaattaatataaaagcttatttatttgcataaactatttttc 897118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 11256667 - 11256599
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| ||||| || ||||||| |||||||||||||||||||||| |||||||| |||||||||    
T  11256667 atacaattttagttagcgagaacttatgaattaacataaaagcttatttatttgcataaactatttttc 11256599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 23297515 - 23297583
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| ||||| || ||||||| ||||| |||||||||||||||| ||||||||||||||||||    
T  23297515 atacaatttttgttagcgagaacttatgaattagcataaaagcttatttatttgcataagctatttttc 23297583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 28074444 - 28074512
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| |||||||| | || |||||||||| |||||||| ||||||||||||||||||    
T  28074444 atacaattttcgttagcgaaaacttgtgaaataacataaaatcttatttatttgcataagctatttttc 28074512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 29877719 - 29877787
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| ||||| || ||||||| ||||||||||||||||||| || ||||||||||||||||||    
T  29877719 atacaatttttgttagtgagaacttatgaattaacataaaagcttatatatttgcataagctatttttc 29877787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 42153165 - 42153089
Alignment:
Q  19 caattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttcgaaatctcaaa 95  Q
    ||||||||||||| || |||| || |||||||||||||||||||||| |||||||||||||||| || || ||||||    
T  42153165 caattttcgttagtgacaactcatgaattaacataaaagcttatttatttgcataagctattttacgtaagctcaaa 42153089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 48591430 - 48591362
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||  || ||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  48591430 atacaattttcgttaatgagaacttatgaattaacgtaaaagcttatttatttgcataagctatttttc 48591362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 8130560 - 8130627
Alignment:
Q  17 tacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||| ||||| |||||||||| ||||||||||||| |||||||| ||||| ||||||||||||    
T  8130560 tacaatttttgttagtgaaaacttatgaattaacataaaaacttatttatttgcacaagctatttttc 8130627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 18630895 - 18630833
Alignment:
Q  22 ttttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| || ||||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  18630895 ttttcgttagtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttc 18630833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 17222909 - 17222977
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||  | ||||||| ||||||||||||| |||||||| ||| ||||||||||||||    
T  17222909 atacaattttcgttagttagaacttatgaattaacataaaaacttatttatttgaataagctatttttc 17222977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 18424284 - 18424216
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| ||||  |||||||||| |||||||||||||||||||||| || ||| |||||||||||    
T  18424284 atacaatttttgttattgaaaacttatgaattaacataaaagcttatttattttcatgagctatttttc 18424216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 34526343 - 34526275
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||  ||| || ||||||| |||||||||||||||||||||| |||||||| |||||||||    
T  34526343 atacaattttccatagtgagaacttatgaattaacataaaagcttatttatttgcataaactatttttc 34526275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 36255042 - 36254974
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||  |||| || ||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  36255042 atacaattttaattagtgagaacttatgaattaacataaaagcttatttatctgcataagctatttttc 36254974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 36740984 - 36741052
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||| |||| || ||||||| ||| |||| ||||||||||||| ||||||||||||||||||    
T  36740984 atacaattttcattagtgagaacttatgaatcaacacaaaagcttatttatttgcataagctatttttc 36741052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 48667770 - 48667818
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  48667770 aacttatgaattaacataaaagcttatttatttgcataagctatttttc 48667818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 488390 - 488323
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    ||||||||||  |||| || ||||||| |||||||||||||||||||||| || ||||||||||||||    
T  488390 atacaatttttattagtgagaacttatgaattaacataaaagcttatttatttccataagctattttt 488323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 42617231 - 42617168
Alignment:
Q  21 attttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||| |||||||||| |||||| |||||| |||||||| || |||||||||||||||    
T  42617231 attttcgttagtgaaaacttataaattaaaataaaaacttatttatttacataagctatttttc 42617168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 7148852 - 7148918
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    ||||||||||| ||||  | ||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  7148852 atacaattttctttagtcagaacttatgaattagcataaaagcttatttatttgcataagctatttt 7148918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 48687014 - 48687080
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    ||||||||||| |||| || ||||||| |||||||||| ||| ||||||| ||||||||||||||||    
T  48687014 atacaattttcattagtgagaacttatgaattaacatataagtttatttatttgcataagctatttt 48687080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 3564305 - 3564354
Alignment:
Q  35 aaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||| |||||||||||||| ||||||| ||||||||||||||||||    
T  3564305 aaacttataaattaacataaaagattatttatttgcataagctatttttc 3564354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 7396356 - 7396429
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacat-aaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||||||| ||| ||||| ||||||||| ||||  ||| ||| ||||||||||||||||||    
T  7396356 gaatatacaattttcgttagaaaaatcttatgaattaacataaaaaatttaattatttgcataagctatttttc 7396429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 8601281 - 8601342
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    |||||||||| ||||| ||||| |||| ||||||||| |||||||||||| |||||||||||    
T  8601281 atacaatttttgttagtgaaaaattataaattaacattaaagcttatttatttgcataagct 8601342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 22273860 - 22273929
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttcg 85  Q
    |||||||||| ||||| || || |||| |||||||||||||| ||||||| |||||||| ||||||||||    
T  22273860 atacaatttttgttagtgagaagttatgaattaacataaaagtttatttatttgcataatctatttttcg 22273929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 12495650 - 12495582
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| ||| |||| || ||||||| ||||||||||||| |||||||| |||||||||||| |||||    
T  12495650 atacaatattcattagtgagaacttataaattaacataaaaacttatttatttgcataagctacttttc 12495582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 15179897 - 15179965
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||  | |||||||  ||||| ||||||||||||||| || |||||||||||||||    
T  15179897 atacaattttcgttagtcagaacttatagattaaaataaaagcttatttatttacataagctatttttc 15179965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 19414195 - 19414263
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || | ||||| || ||| ||||||||||||||| || |||||||||||||||    
T  19414195 atacaattttcgttagtgagagcttataaagtaaaataaaagcttatttatttacataagctatttttc 19414263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 31022480 - 31022560
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttcgaaatctcaaat 96  Q
    ||||||||||||| || |||||||||| ||||||  |||| ||||||||| ||||||||| | ||||||  ||||||||||    
T  31022480 atacaattttcgtcagtgaaaacttatgaattaaggtaaatgcttatttatttgcataagttgtttttcataatctcaaat 31022560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 35405791 - 35405831
Alignment:
Q  44 aattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  35405791 aattaacataaaagcttatttatttgcataagctatttttc 35405831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 41228983 - 41229051
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||| ||||  | ||||||| |||||| ||||||||| ||||| ||||||||||||||||||    
T  41228983 atacaattttcattagttagaacttatgaattaatataaaagctaatttatttgcataagctatttttc 41229051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 43699460 - 43699388
Alignment:
Q  11 agaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    |||| |||||||||||  ||| |  ||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  43699460 agaaaatacaattttcactagtgggaacttatgaattaacataaaaacttatttatttgcataagctattttt 43699388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 9153588 - 9153521
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    ||||||||||| | || || || |||| |||||||||||||| ||||||| |||||||||||||||||    
T  9153588 atacaattttcatcagtgagaatttataaattaacataaaagtttatttatttgcataagctattttt 9153521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 38345808 - 38345761
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    ||||||| |||||||||||||||||||||| || ||||||||||||||    
T  38345808 aacttatgaattaacataaaagcttatttatttacataagctattttt 38345761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 825762 - 825824
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagcta 78  Q
    ||||| |||| ||||| |||| ||||| ||||||||||||| |||||||| ||||||||||||    
T  825762 atacattttttgttagtgaaagcttatgaattaacataaaatcttatttatttgcataagcta 825824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 2702725 - 2702643
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttcgaaatctcaa 94  Q
    ||||||||||||||| ||||  | | ||||| |||||||||||||||||| ||| ||||||| ||| ||||||| || |||||    
T  2702725 gaatatacaattttcattagtaagatcttatgaattaacataaaagcttaattatttgcatatgctctttttcgtaagctcaa 2702643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 9319129 - 9319190
Alignment:
Q  17 tacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagcta 78  Q
    |||||||||| |||  |||||||||  |||||||||||||||||||||| || |||||||||    
T  9319129 tacaattttcattactgaaaacttaaaaattaacataaaagcttatttatttacataagcta 9319190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 10046312 - 10046373
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    |||||||||||||||  |||||| ||| |||||||||||||||||| ||| || ||||||||    
T  10046312 atacaattttcgttattgaaaacatataaattaacataaaagcttaattatttacataagct 10046373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 23335722 - 23335787
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattt 81  Q
    ||||||||||| | || || ||||||| ||||||||||||| ||| ||||||||||| ||||||||    
T  23335722 atacaattttcataagtgagaacttatgaattaacataaaaacttgtttaattgcattagctattt 23335787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 34633470 - 34633531
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    ||||||||||| | || || ||||||| |||||||||||||||||||||| |||| ||||||    
T  34633470 atacaattttcataagtgagaacttatgaattaacataaaagcttatttatttgcgtaagct 34633531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 38876105 - 38876060
Alignment:
Q  39 ttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||||    
T  38876105 ttatgaattaacataaaagtttatttatttgcataagctatttttc 38876060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 4331406 - 4331478
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| |||||||||   ||| |||| ||||||||||||| |||||||| || |||||| ||||||||    
T  4331406 gaatatacaactttcgttagtagaaatttatgaattaacataaaaacttatttatttacataagttatttttc 4331478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 28663653 - 28663720
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||  || ||||||| || ||||||||||||||| ||| |||||||| |||||||||    
T  28663653 atacaattttcgttat-gagaacttatgaactaacataaaagcttaattagttgcataaactatttttc 28663720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 11679133 - 11679066
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    ||||||||||||||||  |||| |||| |||||||||||||  || |||| ||| |||||||||||||    
T  11679133 atacaattttcgttagttaaaatttataaattaacataaaatgttttttatttgtataagctattttt 11679066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 11687412 - 11687345
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    ||||||||||||||||  |||| |||| |||||||||||||  || |||| ||| |||||||||||||    
T  11687412 atacaattttcgttagttaaaatttataaattaacataaaatgttttttatttgtataagctattttt 11687345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 15184626 - 15184693
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    |||||||||||||||| || ||||||| |||||| |||||| |||||||  ||  |||||||||||||    
T  15184626 atacaattttcgttagtgagaacttataaattaaaataaaaacttatttgcttatataagctattttt 15184693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 30956781 - 30956832
Alignment:
Q  33 gaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| ||||||  ||||| |||||||| ||||||||||||||||||    
T  30956781 gaaaacttatgaattaatgtaaaaacttatttatttgcataagctatttttc 30956832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 33534004 - 33534055
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatt 63  Q
    |||||||||||||||||||| || ||||||| || |||||||||| ||||||    
T  33534004 gaatatacaattttcgttagtgagaacttatgaactaacataaaaacttatt 33534055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 41071431 - 41071498
Alignment:
Q  17 tacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| || |||| || ||||| | |||||||||||||||||||||| || | |||||||||||||    
T  41071431 tacaattctcattagtgagaacttgtaaattaacataaaagcttatttattttcttaagctatttttc 41071498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 3966815 - 3966877
Alignment:
Q  22 ttttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| || | ||||| |||||| |||||| |||||||| || |||||||||||||||    
T  3966815 ttttcgttagcgagagcttataaattaaaataaaaacttatttatttacataagctatttttc 3966877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 11298668 - 11298730
Alignment:
Q  22 ttttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| || ||||||  |||||  ||||||| ||||||| ||||||||||||||||||    
T  11298668 ttttcgttagtgagaacttaagaattattataaaagtttatttatttgcataagctatttttc 11298730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 14987604 - 14987538
Alignment:
Q  18 acaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||| || ||||||| |||||| |||||| |||||||| ||  ||||||| ||||||    
T  14987604 acaattttcgttagtgagaacttatgaattaatataaaaacttatttatttatataagctgtttttc 14987538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 42611855 - 42611817
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataa 74  Q
    ||||||| |||||||||||||||||||||| ||||||||    
T  42611855 aacttatgaattaacataaaagcttatttatttgcataa 42611817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 948153 - 948217
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaaca--taaaagcttatttaattgcataagcta 78  Q
    |||||||||| || ||||| ||||||| ||||||||  |||||||||||| | ||||||||||||    
T  948153 atacaatttttgtcagagagaacttatgaattaacacataaaagcttattcatttgcataagcta 948217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 7206565 - 7206516
Alignment:
Q  35 aaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||| |||||| |||||| || ||||| ||||||||||||||||||    
T  7206565 aaacttataaattaatataaaaactgatttatttgcataagctatttttc 7206516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 22117436 - 22117501
Alignment:
Q  19 caattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||  | |||||||  ||||| |||||||||||| || || |||||||||||||||    
T  22117436 caattttcgttagtcagaacttatagattaaaataaaagcttatctatttacataagctatttttc 22117501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 82
Target Start/End: Complemental strand, 23297468 - 23297435
Alignment:
Q  49 acataaaagcttatttaattgcataagctatttt 82  Q
    ||||||||||||||||| ||||||||||||||||    
T  23297468 acataaaagcttatttatttgcataagctatttt 23297435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 24101926 - 24101885
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    ||||||| ||||||||||||| |||||||| |||||||||||    
T  24101926 aacttataaattaacataaaaacttatttatttgcataagct 24101885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 40699440 - 40699501
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    ||||| ||||||| || || ||||||| ||||||||||||| |||||||  |||||||||||    
T  40699440 atacagttttcgtaagtgagaacttatgaattaacataaaatcttatttgtttgcataagct 40699501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 4603338 - 4603270
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || |  |||| |||||| ||||||||||||||| || |||||  ||||||||    
T  4603338 atacaattttcgttagtgagagtttataaattaaaataaaagcttatttatttacataaaatatttttc 4603270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 8633582 - 8633634
Alignment:
Q  194 atctttcaacataaagaaagagaaacgagaaaatagcacaaactaaaaatggt 246  Q
    ||||||| ||| || |||||| |||| |||||| |||||||||||||||||||    
T  8633582 atctttccacagaaggaaagaaaaacaagaaaagagcacaaactaaaaatggt 8633634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 22397315 - 22397243
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||||||  | | ||||| ||||||| |||||||||| ||| |||| ||| || ||||||    
T  22397315 gaatatacaattttcgttagtaagatcttatgaattaacttaaaagcttaattatttgcgtaaactctttttc 22397243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 39931550 - 39931482
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || | ||||| || ||| |||||| |||||||| || |||| ||||||||||    
T  39931550 atacaattttcgttagtgagagcttataaaataaaataaaaacttatttatttacatatgctatttttc 39931482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 47202905 - 47202973
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || | ||||| |||||| ||||||||||| ||| ||  ||||| ||||||||    
T  47202905 atacaattttcgttagtgagatcttataaattaaaataaaagcttacttatttatataagttatttttc 47202973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 24030294 - 24030361
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    |||||||||||||||| || ||||||| |||||||||||||||||||||| |||||||||||||||||    
T  24030294 atacaattttcgttagtgagaacttatgaattaacataaaagcttatttatttgcataagctattttt 24030361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 27805995 - 27806062
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    |||||||||| ||||| |||||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  27805995 atacaatttttgttagtgaaaacttataaattaacataaaagtttatttatttgcataagctattttt 27806062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 28357221 - 28357283
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagcta 78  Q
    |||||||||||||||  |||||||||| |||||||||||||||||||||| ||||||||||||    
T  28357221 atacaattttcgttaacgaaaacttataaattaacataaaagcttatttatttgcataagcta 28357283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 42852101 - 42852167
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    |||||||||||||||| || ||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  42852101 atacaattttcgttagtgagaacttatgaattaacataaaagcttatttagttgcataagctgtttt 42852167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 2878688 - 2878616
Alignment:
Q  11 agaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    |||| |||||||||| ||||| |||||||| | |||||||||||||||||||||| || ||||||||||||||    
T  2878688 agaagatacaatttttgttagtgaaaacttttaaattaacataaaagcttatttatttacataagctattttt 2878616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 5559925 - 5559857
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || || |||| |||| ||||||||||||||||| ||||||||||||||||||    
T  5559925 atacaattttcgttagtgagaatttatgaatttacataaaagcttatttatttgcataagctatttttc 5559857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 13625522 - 13625458
Alignment:
Q  20 aattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||| |||||||||| |||||| ||||||| ||||||| ||||||||||||||||||    
T  13625522 aattttcgttagtgaaaacttataaattaatataaaagtttatttatttgcataagctatttttc 13625458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 28625560 - 28625628
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || ||| ||| |||||||||||||||||||||| ||||||||| ||||||||    
T  28625560 atacaattttcgttagtgagaacctatgaattaacataaaagcttatttatttgcataagttatttttc 28625628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 1943075 - 1943154
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttcgaaatctcaaa 95  Q
    ||||||||||| |||| || ||||||| ||||| |||||||||||||||| |||||||||| |||||||| || ||||||    
T  1943075 atacaattttcattagtgagaacttatgaattagcataaaagcttatttatttgcataagccatttttcgtaagctcaaa 1943154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 10537233 - 10537164
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacat-aaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || ||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  10537233 atacaattttcgttagtgagaacttatgaattaacataaaaagcttatatatttgcataagctatttttc 10537164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 41059792 - 41059727
Alignment:
Q  19 caattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||| || ||||||| |||||||||||||||||||||| |||||||| || ||||||    
T  41059792 caattttcgttagtgagaacttatgaattaacataaaagcttatttatttgcataaactgtttttc 41059727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 41419581 - 41419642
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||| || ||||||||    
T  41419581 atacaattttcgttagtgagaacttatcaattaacataaaaacttatttattttcataagct 41419642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 6125362 - 6125434
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||| || ||||| || || |||| |||||| ||||||||||||||| ||||||||||||||||||    
T  6125362 gaatatacaatatttgttagtgagaaattatgaattaatataaaagcttatttatttgcataagctatttttc 6125434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 6144814 - 6144886
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||| ||||| || ||||||| |||||| |||||||||| |||| |||||||| |||||||||    
T  6144814 gaatatacaatttttgttagcgagaacttatgaattaatataaaagcttgtttatttgcataaactatttttc 6144886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 17868192 - 17868144
Alignment:
Q  34 aaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  17868192 aaaacttatcaattaacataaaaggttatttatttgcataagctatttt 17868144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 40697086 - 40697154
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| |||   |||||||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  40697086 atacaatttttgttcctgaaaacttatgaattaacataaaagcttatttatttgtataagctatttttc 40697154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 35536925 - 35537003
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttcgaaatctcaaa 95  Q
    |||||||||||||||  || ||||||| ||| || ||||||||||||||| ||||||||||||||||||  |||||||||    
T  35536925 atacaattttcgttactgagaacttatgaat-aatataaaagcttatttatttgcataagctatttttcataatctcaaa 35537003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 17657322 - 17657384
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagcta 78  Q
    |||| ||||||||||| || ||||||| |||||||||||||| ||||||| ||||||||||||    
T  17657322 atacgattttcgttagtgagaacttatgaattaacataaaaggttatttatttgcataagcta 17657384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 29922197 - 29922127
Alignment:
Q  14 atatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||  |||| || | ||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  29922197 atatacaattttttttagtgagagcttatgaattaatataaaagcttatttatttgcataagctatttttc 29922127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 40452477 - 40452415
Alignment:
Q  22 ttttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| || ||||||| ||| ||||||| |||||||||| ||||||||||||||||||    
T  40452477 ttttcgttagtgagaacttatgaataaacataatagcttatttatttgcataagctatttttc 40452415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 13060603 - 13060546
Alignment:
Q  21 attttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagcta 78  Q
    ||||||||||| || ||||||| |||||||||||||||||||||| |||||| |||||    
T  13060603 attttcgttagtgagaacttatgaattaacataaaagcttatttatttgcattagcta 13060546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 43268642 - 43268581
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    |||||||||| ||||| || ||||||| |||||||||||||||||||||| || ||||||||    
T  43268642 atacaatttttgttagtgagaacttataaattaacataaaagcttatttattttcataagct 43268581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 39154747 - 39154699
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  39154747 aacttatgaattaacacaaaagcttatttatttgcataagctatttttc 39154699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 41125758 - 41125822
Alignment:
Q  20 aattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||| ||||| || ||||||| ||||||||||||||||||| || ||||| ||||||||||||    
T  41125758 aattttagttagtgagaacttatgaattaacataaaagcttatatatttgcaaaagctatttttc 41125822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 29136832 - 29136765
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    ||||||||| |||| | ||  |||||| |||||||||||||||||||||| |||||||| ||||||||    
T  29136832 atacaatttccgttggtgaggacttatgaattaacataaaagcttatttatttgcataaactattttt 29136765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 29659141 - 29659208
Alignment:
Q  17 tacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| |||| || ||||||| |||||| |||||| |||||||| ||||||||||| ||||||    
T  29659141 tacaattttcattagtgagaacttatgaattaagataaaaacttatttatttgcataagctctttttc 29659208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 2577428 - 2577366
Alignment:
Q  22 ttttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| || ||||||| ||||||||||| |  ||||||| ||||||||||||||||||    
T  2577428 ttttcgttagtgagaacttatgaattaacataacaatttatttatttgcataagctatttttc 2577366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 7364315 - 7364254
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    ||||||| || ||||| || ||||||| |||||| ||||||||||||||| |||||||||||    
T  7364315 atacaatatttgttagtgagaacttatgaattaatataaaagcttatttatttgcataagct 7364254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 11163288 - 11163239
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttattta 65  Q
    |||||||||||||||| |  ||||||| ||||||||||||||||||||||    
T  11163288 atacaattttcgttagtgcgaacttatgaattaacataaaagcttattta 11163239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 35083339 - 35083384
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctattt 81  Q
    ||||||| |||||||||||||||||||||| |||||||| ||||||    
T  35083339 aacttatgaattaacataaaagcttatttatttgcataaactattt 35083384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 1868926 - 1868989
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || ||| ||||||||||||||||||     ||| ||||||||||||||||||    
T  1868926 atacaattttcgttagtgagaacgtatcaattaacataaaag-----ttatttgcataagctatttttc 1868989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 3977564 - 3977620
Alignment:
Q  27 gttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    ||||| || ||| ||| |||||||||||||||||||||| ||||||||||| |||||    
T  3977564 gttagtgagaacgtatgaattaacataaaagcttatttatttgcataagctgttttt 3977620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 11912108 - 11912040
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| ||||| || ||||||| ||||||||| |||||||||||| ||||  ||| ||||||||    
T  11912108 atacaatttttgttagtgagaacttatgaattaacatgaaagcttatttatttgctcaagatatttttc 11912040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 15167720 - 15167652
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||  || || |||| |||||||||||||||| ||||| || ||||| |||||||||    
T  15167720 atacaattttcgttaatgagaatttatgaattaacataaaagctaatttatttacataaactatttttc 15167652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 20458564 - 20458496
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||| |  | |||||||  ||||| ||||||||||||||| || |||||||||||||||    
T  20458564 atacaattttcgttggtcagaacttatagattaaaataaaagcttatttatttacataagctatttttc 20458496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 589249 - 589300
Alignment:
Q  33 gaaaacttatcaattaacataaaag-cttatttaattgcataagctattttt 83  Q
    |||||||||| |||||||||||||  |||||||| |||||||||||||||||    
T  589249 gaaaacttatgaattaacataaaaaacttatttatttgcataagctattttt 589300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 9477417 - 9477484
Alignment:
Q  17 tacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||  || ||||||| |||||| |||||| |||||||| |||||||| || ||||||    
T  9477417 tacaattttcgttactgagaacttatgaattaagataaaaacttatttatttgcataaactctttttc 9477484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 11991384 - 11991451
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    |||||||||||||||| || |  |||| |||||||||||||||||||||| ||| || || |||||||    
T  11991384 atacaattttcgttagtgagagtttataaattaacataaaagcttatttatttgtattagttattttt 11991451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 12467347 - 12467416
Alignment:
Q  18 acaattttcgttagagaaaacttatcaatta---acataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||| ||||| || ||||||| |||||   ||||||||||||||||| ||||||||| ||||||||    
T  12467347 acaatttttgttagtgagaacttatgaattactaacataaaagcttatttatttgcataagttatttttc 12467416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 29418757 - 29418690
Alignment:
Q  17 tacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||| || || |||| |||||| |||||| |||||||| |||||||| || ||||||    
T  29418757 tacaattttcgttagtgagaatttataaattaagataaaaacttatttatttgcataaactttttttc 29418690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 15414068 - 15414138
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    |||||||||||||| |||||  | | ||||| |||||||||||||||||| ||| | ||||||||| ||||    
T  15414068 gaatatacaatttttgttagtaagatcttatgaattaacataaaagcttaattattcgcataagctctttt 15414138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 28357435 - 28357493
Alignment:
Q  19 caattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    ||||||||||||| || ||||||  |||||| |||||| |||||||| |||||||||||    
T  28357435 caattttcgttagtgagaacttacgaattaagataaaaacttatttatttgcataagct 28357493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 42558693 - 42558655
Alignment:
Q  46 ttaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  42558693 ttaaaataaaagcttatttatttgcataagctatttttc 42558655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 13739332 - 13739377
Alignment:
Q  39 ttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||| ||||| |||||||||||||||| ||||||||| ||||||||    
T  13739332 ttatgaattatcataaaagcttatttatttgcataagttatttttc 13739377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 15364103 - 15364140
Alignment:
Q  38 cttatcaattaacataaaagcttatttaattgcataag 75  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  15364103 cttatgaattaacataaaagcttatttatttgcataag 15364140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 22201938 - 22201869
Alignment:
Q  16 atacaattttcgttagaga-aaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || ||| |||| || |||||||||| |||||||| ||| |||| |||||||||    
T  22201938 atacaattttcgttagcgagaaagttatgaaataacataaaaacttatttatttgtataaactatttttc 22201869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 38461271 - 38461218
Alignment:
Q  31 gagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||| ||||||| |||||| |||||| |||||||| || |||||||||||||||    
T  38461271 gagagaacttataaattaaaataaaaacttatttatttacataagctatttttc 38461218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 38498652 - 38498697
Alignment:
Q  20 aattttcgttagagaaaacttatcaattaacataaaagcttattta 65  Q
    |||||| ||||| |||||||||| |||||| |||||||||||||||    
T  38498652 aatttttgttagtgaaaacttataaattaaaataaaagcttattta 38498697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 43265938 - 43265873
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattt 81  Q
    ||||||||||||| || || ||||||  || ||||||||||||||||||| || | ||||||||||    
T  43265938 atacaattttcgtaagtgacaacttacaaaataacataaaagcttatttatttccttaagctattt 43265873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 3520485 - 3520445
Alignment:
Q  44 aattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||| ||||||||||||||||| |||| |||||||||||||    
T  3520485 aatttacataaaagcttatttatttgcgtaagctatttttc 3520445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 5203440 - 5203372
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||| ||| |||||||| | ||||| |||||| ||||||||||||||| || | ||| |||||||||    
T  5203440 atacaaattttgttagagagagcttataaattaaaataaaagcttatttatttacgtaaactatttttc 5203372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 15709898 - 15709830
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||| ||||  ||| ||||| |||||| ||||||||| ||||| ||  ||||||||||||||    
T  15709898 atacaattttcattagtaaaagcttataaattaaaataaaagctcatttatttaaataagctatttttc 15709830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 26003077 - 26003145
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || | ||| | |||||| |||||| |||||||| || |||||| ||||||||    
T  26003077 atacaattttcgttagtgagagcttgtaaattaaaataaaaacttatttatttacataagttatttttc 26003145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 29658058 - 29658002
Alignment:
Q  19 caattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataag 75  Q
    |||||| ||| || || ||||||| |||||||||||||||||||||  |||||||||    
T  29658058 caatttacgtcagtgagaacttataaattaacataaaagcttatttttttgcataag 29658002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 33924760 - 33924720
Alignment:
Q  44 aattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||| ||||||| ||||||||| ||||||||    
T  33924760 aattaacataaaaggttatttatttgcataagttatttttc 33924720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 8e-19; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 10365246 - 10365318
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||||||  ||||||| | |||||||||||||||||||| | ||||||||||||||||||    
T  10365246 gaatatacaattttcgttagtaaaaacttttaaattaacataaaagcttattcatttgcataagctatttttc 10365318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 37329418 - 37329350
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||| | || ||||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  37329418 atacaattttcgttggtgagaacttataaattaacataaaagcttatttatttgcataagttatttttc 37329350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 48819379 - 48819447
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||| |||| ||||| || ||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  48819379 atacattttttgttagtgagaacttatgaattaacataaaagcttatttatttgcataagctatttttc 48819447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 37712147 - 37712226
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttcgaaatctcaaa 95  Q
    |||||| |||||||||  | ||||||| |||||||||||||| ||||||| ||||||||||||||||||| || ||||||    
T  37712147 atacaactttcgttagtaagaacttatgaattaacataaaagtttatttatttgcataagctatttttcgtaagctcaaa 37712226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 22593413 - 22593347
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    |||||||||| ||||| || ||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  22593413 atacaatttttgttagtgagaacttataaattaacataaaagcttatttatttgcataagctgtttt 22593347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 391255 - 391324
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacat-aaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || ||||||| ||||||||| ||||||||||||| ||| ||||||||||||||    
T  391255 atacaattttcgttagcgagaacttatgaattaacataaaaagcttatttatttggataagctatttttc 391324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 6337762 - 6337697
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattt 81  Q
    |||||||||| ||||| || ||||||| |||||||||||||||||||||  |||||||||||||||    
T  6337762 atacaatttttgttagcgagaacttatgaattaacataaaagcttatttgtttgcataagctattt 6337697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 10850072 - 10850004
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||  |||||||||| ||||||||| |||||||||||| ||| ||||| ||||||||    
T  10850072 atacaattttcgttaatgaaaacttataaattaacatgaaagcttatttatttgtataagttatttttc 10850004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 15515353 - 15515285
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || ||||||| ||||||||| |||||||||||| || | |||||||||||||    
T  15515353 atacaattttcgttagtgagaacttatgaattaacatgaaagcttatttatttacttaagctatttttc 15515285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 26988228 - 26988296
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||| |||||||  ||||||||| |||||||||||||||| ||||| |||||||| |||||||||    
T  26988228 atacaattgtcgttagtaaaaacttatgaattaacataaaagctaatttatttgcataaactatttttc 26988296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 35897625 - 35897557
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||| |||| ||||| |||| |||||||||||||| ||||||| || |||||||||||||||    
T  35897625 atacaattttcattagtgaaaatttataaattaacataaaagtttatttatttacataagctatttttc 35897557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 46501007 - 46500939
Alignment:
Q  16 atacaattttc-gttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    ||||||||||| ||||| |||||||||| ||| |||||||||||||||||| ||||||||| |||||||    
T  46501007 atacaattttccgttagtgaaaacttataaatcaacataaaagcttatttatttgcataagttattttt 46500939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 47413469 - 47413520
Alignment:
Q  33 gaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||| |||| |||||||||||||||||||||| ||||||||||||||||||    
T  47413469 gaaaaattataaattaacataaaagcttatttatttgcataagctatttttc 47413520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 9572784 - 9572722
Alignment:
Q  22 ttttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||| ||||| || ||||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  9572784 tttttgttagtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttc 9572722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 36259297 - 36259236
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    |||||||||||||||  ||| |||||| |||||| ||||||||||||||| |||||||||||    
T  36259297 atacaattttcgttaatgaagacttataaattaatataaaagcttatttatttgcataagct 36259236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 4068195 - 4068263
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||| ||||||||||| || ||||||| |||||| ||||||| ||||||| |||||||||||| |||||    
T  4068195 atactattttcgttagtgagaacttatgaattaatataaaagtttatttatttgcataagctacttttc 4068263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 15791463 - 15791531
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||  || | ||||| |||||| ||||||||||||||| || |||||||||||||||    
T  15791463 atacaattttcgttaatgagagcttataaattaaaataaaagcttatttatttacataagctatttttc 15791531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 17628431 - 17628363
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || | ||| | |||||| ||||||||||||||| || |||||||||||||||    
T  17628431 atacaattttcgttagtgagagcttctaaattaaaataaaagcttatttatttacataagctatttttc 17628363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 17814270 - 17814338
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||  | |||||||  ||||| ||||||||||||||| || |||||||||||||||    
T  17814270 atacaattttcgttagtcagaacttatagattaaaataaaagcttatttatttacataagctatttttc 17814338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 28690112 - 28690152
Alignment:
Q  44 aattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  28690112 aattaacataaaagcttatttatttgcataagctatttttc 28690152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 32497278 - 32497210
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || | ||||| |||||| ||||||| ||||||| || |||||||||||||||    
T  32497278 atacaattttcgttagtgagagcttataaattaaaataaaagtttatttatttacataagctatttttc 32497210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 42591462 - 42591530
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||| |||||||||| |||| ||||| |||||| |||||| |||||||| || |||||||||||||||    
T  42591462 atacacttttcgttagtgaaagcttataaattaaaataaaaacttatttatttacataagctatttttc 42591530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 13039033 - 13039095
Alignment:
Q  22 ttttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| || || |||| |||||| ||||||| ||||||| ||||||||||||||||||    
T  13039033 ttttcgttagtgagaagttatgaattaatataaaagtttatttatttgcataagctatttttc 13039095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 41196716 - 41196650
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    |||||||||| ||||| || | ||| | |||||||||||| ||||||||| ||||||||||||||||    
T  41196716 atacaatttttgttagtgagagcttgtgaattaacataaaggcttatttatttgcataagctatttt 41196650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 28870286 - 28870351
Alignment:
Q  19 caattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||| |||| || ||||||| ||| |||||||||||||||||| ||||| ||| ||||||||    
T  28870286 caattttctttagtgagaacttatgaatgaacataaaagcttatttatttgcaaaagttatttttc 28870351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 5347234 - 5347302
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||   | |||||||  ||||| ||||||||||||||| || |||||||||||||||    
T  5347234 atacaattttcgttaatcagaacttatagattaaaataaaagcttatttatttacataagctatttttc 5347302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 8410213 - 8410281
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || | ||| | |||||| ||||||||||||||| || || ||||||||||||    
T  8410213 atacaattttcgttagtgagagcttgtaaattaaaataaaagcttatttatttacagaagctatttttc 8410281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 19395854 - 19395922
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| |||| ||||| |||||| |||||| ||||||||  |  ||||||||||||||    
T  19395854 atacaattttcgttagtgaaagcttataaattaaaataaaaacttatttatatatataagctatttttc 19395922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 22103189 - 22103257
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||  | |||||||  ||||| |||||||||| |||| || |||||||||||||||    
T  22103189 atacaattttcgttagttagaacttatagattaaaataaaagcttctttatttacataagctatttttc 22103257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 38781160 - 38781216
Alignment:
Q  18 acaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataa 74  Q
    |||||||| ||||| || ||||||| ||||||||||||||| |||||| ||||||||    
T  38781160 acaattttggttagtgagaacttatgaattaacataaaagcatatttatttgcataa 38781216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 46689552 - 46689488
Alignment:
Q  20 aattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||| || ||||||| |||||| |||| || ||||||| ||||||||| ||||||||    
T  46689552 aattttcgttagtgagaacttatgaattaatataatagtttatttatttgcataagttatttttc 46689488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 28122700 - 28122766
Alignment:
Q  20 aattttcgttag--agaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||  ||||||||| | |||||| ||||||||||||||| || ||||| |||||||||    
T  28122700 aattttcgttagtaagaaaacttctgaattaatataaaagcttatttattttcataaactatttttc 28122766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 37156930 - 37156867
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataag 75  Q
    |||||||||||||||| |||  | | ||||| |||||||||||||||||| ||| |||||||||    
T  37156930 gaatatacaattttcgctagtaagatcttatgaattaacataaaagcttaattatttgcataag 37156867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 37431231 - 37431282
Alignment:
Q  33 gaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| |||||||| ||||||||||||| | ||||||| ||||||||    
T  37431231 gaaaacttatgaattaacaaaaaagcttatttattcgcataagttatttttc 37431282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 45267546 - 45267610
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||  | ||||||| ||| |||||||||||||||    ||||||||||||||||||    
T  45267546 atacaattttcgttagtaagaacttatgaataaacataaaagcttat----ttgcataagctatttttc 45267610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 50919567 - 50919634
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    |||||||||||||||   |||||| || ||||||||| |||||||||||| ||||||||  |||||||    
T  50919567 atacaattttcgttaataaaaactaataaattaacatgaaagcttatttatttgcataatttattttt 50919634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 3069860 - 3069794
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    |||||||||||  ||| || ||||||| |||||||||||||||||||||| |  |||||||| ||||    
T  3069860 atacaattttcactagtgagaacttatgaattaacataaaagcttatttattgtcataagctgtttt 3069794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 12871481 - 12871420
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagcta 78  Q
    |||| |||||| |||  |||||||||| ||||||||||||| |||||||||||| ||||||||    
T  12871481 ataccattttcattaatgaaaacttatgaattaacataaaaacttatttaattg-ataagcta 12871420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 16888972 - 16888914
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataa 74  Q
    ||||||||||| |||| || || |||| | |||||||||||||||||||| ||||||||    
T  16888972 atacaattttcattagtgagaatttatgacttaacataaaagcttatttatttgcataa 16888914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 23544899 - 23544937
Alignment:
Q  44 aattaacataaaagcttatttaattgcataagctatttt 82  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  23544899 aattaacataaaagcttatttatttgcataagcaatttt 23544937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 26543054 - 26543116
Alignment:
Q  17 tacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctat 79  Q
    ||||||||||||||| |||||||||| | |||| || |||  ||||||| |||||||||||||    
T  26543054 tacaattttcgttagtgaaaacttataagttaagattaaaatttatttatttgcataagctat 26543116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 52363865 - 52363811
Alignment:
Q  29 tagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    |||||| ||||||| |||||| ||||||||||||||| || ||||| ||||||||    
T  52363865 tagagagaacttataaattaaaataaaagcttatttatttacataaactattttt 52363811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 19220276 - 19220321
Alignment:
Q  39 ttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||| |||||| ||||||||||||||| |||||||| |||||||||    
T  19220276 ttataaattaaaataaaagcttatttatttgcataaactatttttc 19220321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 20169341 - 20169410
Alignment:
Q  13 aatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    |||||||||||| ||| |  || ||||||  ||||||||||||| |||||||| ||||||||||| ||||    
T  20169341 aatatacaatttccgtcaatgagaacttaaaaattaacataaaaacttatttatttgcataagctgtttt 20169410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 35275908 - 35275843
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    |||||||||||||||||||| || |  |||| |||||| ||||||| ||||||| || ||||||||    
T  35275908 gaatatacaattttcgttagtgagattttataaattaaaataaaagtttatttatttacataagct 35275843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 42367053 - 42367098
Alignment:
Q  39 ttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||| ||||||||||| | |||||||| ||||||||||||||||||    
T  42367053 ttatgaattaacataagaacttatttatttgcataagctatttttc 42367098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 1005420 - 1005488
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| | ||| || ||||||| ||||||||| |||||| ||||| |||  |||||||||||||    
T  1005420 atacaatttttgatagtgagaacttatgaattaacatcaaagctcatttatttgagtaagctatttttc 1005488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 3116068 - 3116000
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||  | | ||||| |||||| ||||||||||| ||| || |||||| ||||||||    
T  3116068 atacaattttcgttagtaagatcttataaattaaaataaaagcttacttatttacataagttatttttc 3116000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 5243410 - 5243342
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||  || | | ||| |||||| ||||||||||||||| || |||||| ||||||||    
T  5243410 atacaattttcgttacggagagcatataaattaaaataaaagcttatttatttacataagttatttttc 5243342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 9575412 - 9575476
Alignment:
Q  20 aattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||| || |||| ||||||||||| |  ||||||| ||| |||| |||||||||    
T  9575412 aattttcgttagagagaatttataaattaacataataatttatttatttgtataaactatttttc 9575476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 12828208 - 12828272
Alignment:
Q  20 aattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||  ||||||||||  ||||| ||||||| |||| || |||||||||| |||||||    
T  12828208 aattttcgttaatgaaaacttatagattaatataaaagtttatctatttgcataagcaatttttc 12828272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 35590210 - 35590278
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaaca-taaaagcttatttaattgcataagctattttt 83  Q
    ||||||||||||| || || ||||||| |||||||| ||||| ||| |||| ||| |||||||||||||    
T  35590210 atacaattttcgtcagtgagaacttatgaattaacattaaaaacttttttatttggataagctattttt 35590278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 41130074 - 41130142
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||| |||| | |||||||  ||||||||||||| |||||||| | | ||||| ||||||||    
T  41130074 atacaattttcattagtgcaaacttaagaattaacataaaatcttatttattagaataagttatttttc 41130142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 41576397 - 41576337
Alignment:
Q  20 aattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatt 80  Q
    |||||| ||||| || |||||||  ||||||||||||| ||||||| |||||||| |||||    
T  41576397 aatttttgttagtgataacttatatattaacataaaagtttatttatttgcataatctatt 41576337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 49822817 - 49822865
Alignment:
Q  17 tacaattttcgttagagaaaacttatcaattaacataaaagcttattta 65  Q
    ||||||||||||||| ||||| |||| |||||| |||||| ||||||||    
T  49822817 tacaattttcgttagtgaaaatttatgaattaaaataaaaacttattta 49822865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 29378725 - 29378793
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||  | ||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  29378725 atacaattttcgttagtaagaacttatgaattaacgtaaaagcttatttatttgcataagctatttttc 29378793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 33204915 - 33204982
Alignment:
Q  17 tacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| ||||||| || ||||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  33204915 tacaattatcgttagtgagaacttatgaattaacataaaagcttatttatttgcataagatatttttc 33204982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 34923013 - 34923080
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    ||||| |||||||||| || ||||||| || ||||||||||||||||||| |||||||||||||||||    
T  34923013 atacacttttcgttagtgagaacttatgaactaacataaaagcttatttatttgcataagctattttt 34923080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 38372640 - 38372706
Alignment:
Q  18 acaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||| || ||||||| |||||||||||||||| ||||| |||||| |||||||||||    
T  38372640 acaattttcgttagtgagaacttatgaattaacataaaagctgatttatttgcattagctatttttc 38372706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 25908374 - 25908442
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||| | ||||| |||| ||||||||||||| |||||||| |||||||||| |||||||    
T  25908374 atacaattttcgtttgtgaaaagttataaattaacataaaaacttatttatttgcataagccatttttc 25908442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 29390557 - 29390489
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||  | || |||| |||||||||||||||||||||| |||||||| |||||||||    
T  29390557 atacaattttcgttagctagaatttatgaattaacataaaagcttatttatttgcataaactatttttc 29390489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 33288081 - 33288013
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||| |||||||||| |||||||||| ||||||||||||| |||||||| ||| |||||||| |||||    
T  33288081 atacagttttcgttagtgaaaacttatgaattaacataaaaacttatttatttggataagctagttttc 33288013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 22032843 - 22032910
Alignment:
Q  17 tacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||| || ||||||| |||||| |||||| |||||||| ||||||||||| ||||||    
T  22032843 tacaattttcgttagtgagaacttataaattaagataaaaacttatttatttgcataagctttttttc 22032910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 46744033 - 46744096
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctat 79  Q
    |||||||||||||||| || ||||||  |||||||||||||||||||||| || ||||||||||    
T  46744033 atacaattttcgttagtgagaacttacgaattaacataaaagcttatttattttcataagctat 46744096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 26331868 - 26331913
Alignment:
Q  39 ttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||    
T  26331868 ttatgaattaacataaaagcttatttatttgcataagctatttttc 26331913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 14691301 - 14691237
Alignment:
Q  20 aattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||| || ||||||| |||||||||||||| ||||||| |||||| | |||||||||    
T  14691301 aattttcgttagtgagaacttatgaattaacataaaaggttatttatttgcatgaactatttttc 14691237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 16932936 - 16932868
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||  ||| ||||| |||||| |||||||||||||||  | |||||||||||||||    
T  16932936 atacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatttttc 16932868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 16938319 - 16938251
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||  ||| ||||| |||||| |||||||||||||||  | |||||||||||||||    
T  16938319 atacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatttttc 16938251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 16958895 - 16958963
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||  ||| ||||| |||||| |||||||||||||||  | |||||||||||||||    
T  16958895 atacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatttttc 16958963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 44613459 - 44613411
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  44613459 aacttatgaattaatataaaagcttatttatttgcataagctatttttc 44613411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 43818883 - 43818816
Alignment:
Q  17 tacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| |||| || ||||||| |||||| |||||| |||||||| ||||||||||| ||||||    
T  43818883 tacaattttcattagtgagaacttatgaattaagataaaaacttatttatttgcataagctctttttc 43818816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 47654419 - 47654352
Alignment:
Q  17 tacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||| || ||||||| |||||| |||||| |||||||| ||||||||| | ||||||    
T  47654419 tacaattttcgttagtgagaacttatgaattaagataaaaacttatttatttgcataagatctttttc 47654352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 28004685 - 28004730
Alignment:
Q  38 cttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    ||||| |||||| ||||||||||||||| |||||||||||||||||    
T  28004685 cttataaattaaaataaaagcttatttatttgcataagctattttt 28004730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 39279509 - 39279578
Alignment:
Q  16 atacaattttcgttaga-gaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||   || ||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  39279509 atacaattttcgttaattgagaacctatgaattaacataaaagcttatttatttgtataagctatttttc 39279578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 991579 - 991647
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||| |||||||||| || |  |||| |||||| ||||||||||||||| || |||||||||||||||    
T  991579 atacacttttcgttagtgagagtttataaattaaaataaaagcttatttatttacataagctatttttc 991647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 1401173 - 1401221
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| |||||||||||||||||||||| |||||| | |||||||||    
T  1401173 aacttatgaattaacataaaagcttatttatttgcatgaactatttttc 1401221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 16012778 - 16012846
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| |||||||||| ||||||| ||| |  || |||| |||| |||||||||||||    
T  16012778 atacaattttcgttagtgaaaacttatgaattaacctaacaatttttttatttgcttaagctatttttc 16012846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 19914029 - 19914093
Alignment:
Q  20 aattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||  ||| |||||  ||||| ||||||||||||||| || |||||||||||||||    
T  19914029 aattttcgttagtaaaagcttatatattaaaataaaagcttatttatttacataagctatttttc 19914093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 20888654 - 20888722
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||| |  | |||||||||| ||||||||||||| |||| ||| ||||||||| ||||||||    
T  20888654 atacaattttcttccgtgaaaacttataaattaacataaaaacttacttatttgcataagttatttttc 20888722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 23137169 - 23137101
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||| |||| || | ||||| |||||| ||||||||||| ||| || |||||||||||||||    
T  23137169 atacaattttcattagtgagagcttataaattaaaataaaagcttacttatttacataagctatttttc 23137101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 30181650 - 30181694
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctatt 80  Q
    ||||||| |||||||||||||||||||||| |||||||| |||||    
T  30181650 aacttatgaattaacataaaagcttatttatttgcataaactatt 30181694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 32358700 - 32358756
Alignment:
Q  27 gttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    ||||| || ||||||| |||||||||||||||||||||| ||||||||  |||||||    
T  32358700 gttagtgagaacttataaattaacataaaagcttatttacttgcataaattattttt 32358756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 35246749 - 35246817
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| ||   ||||| |||||| ||||||||||||||| || |||| ||||||||||    
T  35246749 atacaattttcgttagtgagggcttataaattaaaataaaagcttatttatttacataggctatttttc 35246817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 37465872 - 37465824
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| |||||| ||||||||||||||| |||||||||||| |||||    
T  37465872 aacttatgaattaatataaaagcttatttatttgcataagctaattttc 37465824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 47511145 - 47511193
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| |||||||||||||  |||||||| |||||||||||||||||    
T  47511145 aacttatgaattaacataaaaaattatttaactgcataagctatttttc 47511193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 22515550 - 22515480
Alignment:
Q  14 atatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||| |||||| |||||  ||||| ||| |||||||||||||  ||||||| ||||||||||||| ||||    
T  22515550 atatataatttttgttagtaaaaacatataaattaacataaaaaattatttatttgcataagctatctttc 22515480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 27811425 - 27811491
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    |||||||||| ||||| |||||||||| |||||||||||||  ||| ||| || |||||| ||||||    
T  27811425 atacaatttttgttagtgaaaacttataaattaacataaaattttaattatttacataagttatttt 27811491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 30094713 - 30094667
Alignment:
Q  38 cttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||| |||||| ||||||||||||||| ||||||||||| ||||||    
T  30094713 cttatgaattaagataaaagcttatttatttgcataagctctttttc 30094667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 18251534 - 18251481
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttattta 65  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||||  |||||||    
T  18251534 gaatatacaattttcgttagcaaaatcttataaattaacataaaaatttattta 18251481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 32848606 - 32848679
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttattta-attgcataagctatttttc 84  Q
    ||||| ||||||||| ||||  |||| |||| ||||||||||||| ||||||||  ||||||||| ||||||||    
T  32848606 gaatacacaattttcattagttaaaatttataaattaacataaaaccttatttattttgcataagttatttttc 32848679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 1312189 - 1312261
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||| ||||| |||| || |  |||| |||||| ||||||| ||||||| || |||||||||||||||    
T  1312189 gaatatacacttttcattagtgagagtttataaattaaaataaaagtttatttatttacataagctatttttc 1312261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 22575666 - 22575734
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||  | | ||||| |||||| |||||| ||||||||  | |||||||||||||||    
T  22575666 atacaattttcgttagtaagagcttataaattaaaataaaaacttatttatctacataagctatttttc 22575734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 40240583 - 40240515
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || | ||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  40240583 atacaattttcgttagtgagagcttatgaattaagataaaagcttatttatttgcataagctatttttc 40240515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 40581080 - 40581014
Alignment:
Q  18 acaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||| || ||||||| ||||||||||||| |||||||| ||||||||| ||||||||    
T  40581080 acaattttcgttagtgagaacttatgaattaacataaaatcttatttatttgcataagatatttttc 40581014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 53261774 - 53261705
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaaca-taaaagcttatttaattgcataagctatttttc 84  Q
    |||||| |||||| || || ||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  53261774 atacaactttcgtcagtgagaacttatgaattaacaataaaagcttatttaattgcataagctatttttc 53261705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 3845939 - 3845999
Alignment:
Q  21 attttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattt 81  Q
    ||||||| ||| |||||| ||| |||||||||||||||||||||| |||||||||||||||    
T  3845939 attttcgctagtgaaaacatatgaattaacataaaagcttatttatttgcataagctattt 3845999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 17752137 - 17752069
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||  | ||||||| |||||||||||||| ||||||| || |||||||||||||||    
T  17752137 atacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagctatttttc 17752069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 19053457 - 19053389
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||  | ||||||| |||||||||||||| ||||||| || |||||||||||||||    
T  19053457 atacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagctatttttc 19053389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 20174950 - 20174878
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||||||  | | ||||| ||||| |||||||||||||||| ||||||||||| ||||||    
T  20174950 gaatatacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagctctttttc 20174878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 38524164 - 38524236
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||| |||||||||||||  | | ||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  38524164 gaatatgcaattttcgttagtaagatcttatgaattaacataaaagcttatttatttgcataagctctttttc 38524236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 42956185 - 42956126
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataag 75  Q
    |||||||||||||||| || ||||||| ||||||||||||| |||||||| |||||||||    
T  42956185 atacaattttcgttagtgagaacttataaattaacataaaaacttatttatttgcataag 42956126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 27769736 - 27769790
Alignment:
Q  23 tttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    ||||||||  |||||||||| |||||||||||||||||||||| |||||||||||    
T  27769736 tttcgttaatgaaaacttataaattaacataaaagcttatttatttgcataagct 27769790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 46573437 - 46573392
Alignment:
Q  39 ttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||    
T  46573437 ttatgaattaacataaaagcttatttatttgcataagctatttttc 46573392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 4974387 - 4974459
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||| || ||| |  ||| ||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  4974387 gaatatacaatatttgttggtaaaatcttatgaattaacataaaagcttatttatttgcataagctctttttc 4974459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 30321735 - 30321668
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||| || | |||||||||| |||||| ||||| ||||||||| ||||||||||||||||||    
T  30321735 atacaattttcattggtgaaaacttataaattaa-ataaaggcttatttatttgcataagctatttttc 30321668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 33946552 - 33946488
Alignment:
Q  20 aattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||  || ||||||| |||||| ||||||||| ||||| ||||||||||||||||||    
T  33946552 aattttcgttaatgagaacttatgaattaatataaaagctcatttatttgcataagctatttttc 33946488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 34707719 - 34707651
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || ||||||  ||||||||||||| |||||||| |||| |||| ||||||||    
T  34707719 atacaattttcgttagcgagaacttacgaattaacataaaaacttatttatttgcttaagttatttttc 34707651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 43079940 - 43079872
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||| |  || ||||||| ||||||| |||||||||||||| ||| ||||||||||||||    
T  43079940 atacaattttcgtgattgagaacttatgaattaacttaaaagcttatttatttgaataagctatttttc 43079872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 52895410 - 52895343
Alignment:
Q  17 tacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||| || || |||| |||||||||||||||||||||| |||| ||| | |||||||    
T  52895410 tacaattttcgttagtgagaatttatgaattaacataaaagcttatttatttgcctaaacaatttttc 52895343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 10449061 - 10449118
Alignment:
Q  20 aattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    |||||||||||| || ||||||| |||||| |||||| |||||||| |||||||||||    
T  10449061 aattttcgttagtgagaacttatgaattaagataaaaacttatttatttgcataagct 10449118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 45331301 - 45331236
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattt 81  Q
    |||||||||||| |||  | ||| ||| |||||||||||||| ||||||| |||||||||||||||    
T  45331301 atacaattttcgctagcaagaacatatgaattaacataaaagtttatttatttgcataagctattt 45331236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 48816791 - 48816856
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    |||||||||||||||||| |  | | ||||| ||||||| |||||||||||||| |||||||||||    
T  48816791 gaatatacaattttcgttggtaagatcttataaattaacttaaaagcttatttatttgcataagct 48816856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 3645382 - 3645450
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || | ||||| |||||| ||| || |||||||| || |||||||||||||||    
T  3645382 atacaattttcgttagtgagagcttataaattaaaatataaacttatttatttacataagctatttttc 3645450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 3876249 - 3876201
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| |||||| |||||| |||||||| ||||||||||||||||||    
T  3876249 aacttatgaattaatataaaaacttatttatttgcataagctatttttc 3876201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 21720987 - 21721055
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || ||||||| | |||||||||||  ||| ||  ||||||||||||||||||    
T  21720987 atacaattttcgttagtgagaacttatgacttaacataaaaaattacttttttgcataagctatttttc 21721055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 25341354 - 25341418
Alignment:
Q  20 aattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||| |||||||| | |||||| |||||| |||||||| || |||||||| ||||||    
T  25341354 aattttcgttagggaaaacttgtgaattaatataaaaacttatttatttacataagctctttttc 25341418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 29614273 - 29614341
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || | ||||| |||||| ||| || |||||||| || |||||||||||||||    
T  29614273 atacaattttcgttagtgagagcttataaattaaaatataaacttatttatttacataagctatttttc 29614341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 48597873 - 48597793
Alignment:
Q  16 atacaattttcgttagagaaaactta-tcaattaacataaaagcttatttaattgcataagctatttttcgaaatctcaaa 95  Q
    ||||||||||||| || || |||||| | |||||||||||||||||||||| ||||| |  |||||||||| || ||||||    
T  48597873 atacaattttcgtcagtgagaacttaatgaattaacataaaagcttatttatttgcaaacactatttttcgtaagctcaaa 48597793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 53218046 - 53217998
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttattt 64  Q
    |||||||||||||||| || ||||||| |||||| ||||||||||||||    
T  53218046 atacaattttcgttagtgagaacttataaattaaaataaaagcttattt 53217998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 29830645 - 29830578
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    |||||||||||||||| || ||||||| |||||| |||||| |||||||| || || ||| |||||||    
T  29830645 atacaattttcgttagtgagaacttataaattaaaataaaaacttatttatttacacaagttattttt 29830578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 36638912 - 36638841
Alignment:
Q  13 aatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||| |||||||||||  |||||||||| ||||||||||||| || ||||| || ||||| |||| ||||    
T  36638912 aatatataattttcgttattgaaaacttataaattaacataaaaactcatttatttacataaactatatttc 36638841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 43376776 - 43376843
Alignment:
Q  17 tacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||  |  |||||||||| |||||| |||||| |||||||| ||||||||||| ||||||    
T  43376776 tacaattttcgcaaatgaaaacttatgaattaatataaaaacttatttagttgcataagctctttttc 43376843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 22809199 - 22809138
Alignment:
Q  16 atacaattttcgttagagaa-aacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    ||||||||||||||| |||| ||||||| ||||||||||||| |||||||| ||||| |||||    
T  22809199 atacaattttcgtta-agaagaacttatgaattaacataaaaacttatttatttgcacaagct 22809138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 36182580 - 36182642
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataa 74  Q
    ||||||| |||||| ||||| || || |||  |||||||||||||||||||||| ||||||||    
T  36182580 gaatatataatttttgttagcgagaatttaaaaattaacataaaagcttatttatttgcataa 36182642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 1516104 - 1516043
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    ||||||||||| |||| || ||||||| |||||| |||||| |||||||| || ||||||||    
T  1516104 atacaattttcattagtgagaacttataaattaaaataaaaacttatttatttacataagct 1516043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 37778213 - 37778262
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttattta 65  Q
    |||||||||| ||||| || ||||||| |||||| |||||||||||||||    
T  37778213 atacaatttttgttagtgagaacttataaattaaaataaaagcttattta 37778262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 20685865 - 20685933
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||| |||| || ||||| | ||||| ||||||| |||||||| ||| |||||| |||||||    
T  20685865 atacaattttcattagtgagaacttgtgaattatcataaaaacttatttatttggataagcaatttttc 20685933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 32901150 - 32901086
Alignment:
Q  20 aattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||| || |||||||   |||| |||||| | |||||| ||||||||||||||||||    
T  32901150 aattttcgttagtgagaacttatattttaatataaaaacatatttatttgcataagctatttttc 32901086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 32983274 - 32983230
Alignment:
Q  39 ttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    |||| |||||||||||||  ||||||| |||||||||||||||||    
T  32983274 ttataaattaacataaaaatttatttatttgcataagctattttt 32983230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 37243566 - 37243614
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| |||||| ||||||||||| ||| ||||||||||| ||||||    
T  37243566 aacttatgaattaagataaaagcttacttatttgcataagctctttttc 37243614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 43069138 - 43069186
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||| ||| ||||||||| |||||||||| | ||||||||||||||||    
T  43069138 aacttttcacttaacataagagcttatttattcgcataagctatttttc 43069186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 8e-16; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 12817110 - 12817047
Alignment:
Q  20 aattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    ||||||| |||| |||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  12817110 aattttcattagtgaaaacatataaattaacataaaagcttatttatttgcataagctattttt 12817047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 9201727 - 9201661
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    ||||||||| |||||| || ||||||| |||||||||||||||||||||| |||||||||| |||||    
T  9201727 atacaatttccgttagtgagaacttatgaattaacataaaagcttatttatttgcataagcgatttt 9201661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 10755287 - 10755221
Alignment:
Q  18 acaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||  | ||||||| |||||||||||||||||||||| |||||||| |||||||||    
T  10755287 acaattttcgttagtaagaacttatgaattaacataaaagcttatttatttgcataaactatttttc 10755221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 10874064 - 10874126
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagcta 78  Q
    |||||||||| ||| | |||||||||| |||||||||||||||||||||| ||||||||||||    
T  10874064 atacaattttagttggtgaaaacttatgaattaacataaaagcttatttatttgcataagcta 10874126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 8014868 - 8014936
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| ||||| ||||||| || |||||||||||||||||||| | ||||||| ||||||||||    
T  8014868 atacaattttggttagtgaaaactgataaattaacataaaagcttattaatttgcatatgctatttttc 8014936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 9764397 - 9764329
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||  ||| |||||| |||||||||||||||||||||| ||||||||  ||||||||    
T  9764397 atacaattttcgttaatgaacacttataaattaacataaaagcttatttatttgcataaattatttttc 9764329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 23239327 - 23239395
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||| |||| |||| || ||||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  23239327 atacaactttccttagtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttc 23239395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 35071414 - 35071366
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  35071414 aacttatgaattaacataaaagcttatttatttgcataagctatttttc 35071366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 3210975 - 3210929
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||    
T  3210975 aacttatgaattaacataaaagcttatttatttgcataagctatttt 3210929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 10687390 - 10687456
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    |||||||||||||||| || ||||||| || | ||||||||||||||||| |||||||| |||||||    
T  10687390 atacaattttcgttagcgagaacttatgaactgacataaaagcttatttatttgcataaactatttt 10687456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 12816909 - 12816839
Alignment:
Q  15 tatacaattttcgttagagaaaactta-tcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||| ||||||||||| || |||||| | |||||||||||||||||||||| |||||||| |||||||||    
T  12816909 tataccattttcgttagtgagaacttaatgaattaacataaaagcttatttatttgcataaactatttttc 12816839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 34510009 - 34510059
Alignment:
Q  34 aaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  34510009 aaaacttataaattaacataaaagcttacttaattgcatatgctatttttc 34510059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 6758707 - 6758776
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaa-gcttatttaattgcataagctatttttc 84  Q
    |||||| ||||||||| || ||||||| |||||| |||||| ||||||||| ||||||||||||||||||    
T  6758707 atacaaatttcgttagtgagaacttatgaattaatataaaaagcttatttatttgcataagctatttttc 6758776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 6752892 - 6752960
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||| |||| ||  | |||| |||||| ||||||||||||||| ||||||||||||||||||    
T  6752892 atacaattttcattagtgaggatttatgaattaatataaaagcttatttatttgcataagctatttttc 6752960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 9202405 - 9202337
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||  |||| || ||||||| |||||||||||||||||||||| |  |||||||||||||||    
T  9202405 atacaatttttattagtgataacttatgaattaacataaaagcttatttattaacataagctatttttc 9202337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 32165267 - 32165199
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || | ||||| |||||| |||||| |||||||| || |||||||||||||||    
T  32165267 atacaattttcgttagtgagagcttataaattaaaataaaaacttatttatttacataagctatttttc 32165199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 32675895 - 32675827
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||| |||| || ||||||| |||||| |||||| |||||||| ||||||||| ||||||||    
T  32675895 atacaattttcattagtgagaacttatgaattaatataaaaacttatttatttgcataagttatttttc 32675827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 83
Target Start/End: Complemental strand, 21025197 - 21025158
Alignment:
Q  44 aattaacataaaagcttatttaattgcataagctattttt 83  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  21025197 aattaacataaaagcttatttatttgcataagctattttt 21025158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 29623477 - 29623416
Alignment:
Q  22 ttttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| || ||||||| ||||||||||||  |||||||| ||||||||||||||||||    
T  29623477 ttttcgttagtgagaacttatgaattaacataaat-cttatttatttgcataagctatttttc 29623416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 2034235 - 2034170
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattt 81  Q
    ||||||||||||| ||  | ||||||| | | |||||||||||||||||| |||||||||||||||    
T  2034235 atacaattttcgtaagtaataacttatgattcaacataaaagcttatttatttgcataagctattt 2034170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 2027162 - 2027114
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| |||||||||||||| |||| || ||||||||||||||||||    
T  2027162 aacttatgaattaacataaaagtttatctatttgcataagctatttttc 2027114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 8011054 - 8010983
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||||||  | | ||||| ||| |||||||||||||| ||| ||||||||||| ||||||    
T  8011054 gaatatacaattttcgttagtaagatcttatgaat-aacataaaagcttaattatttgcataagctttttttc 8010983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 9894851 - 9894923
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||| ||||||||||||||  || | ||||| |||||| |||||| |||||||| || |||||||||||||||    
T  9894851 gaatttacaattttcgttattgagagcttataaattaaaataaaaacttatttatttacataagctatttttc 9894923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 21891324 - 21891276
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| |||||||||||||||||||| | | ||||||||||||||||    
T  21891324 aacttatgaattaacataaaagcttattcattcgcataagctatttttc 21891276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 2255814 - 2255881
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    |||||||||| | ||| || ||| ||| |||||||||||||||||||||| || |||||| |||||||    
T  2255814 atacaatttttggtagtgagaacatatgaattaacataaaagcttatttatttacataagttattttt 2255881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 6958704 - 6958770
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    ||||||||||| |||| || || |||| |||||  |||||||||||||||  |||||||||||||||    
T  6958704 atacaattttctttagtgagaagttataaattagtataaaagcttatttatgtgcataagctatttt 6958770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 10184334 - 10184268
Alignment:
Q  18 acaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||  | | ||||| |||||| ||||||||||||||| ||  ||||||||||||||    
T  10184334 acaattttcgttagtaagagcttataaattaaaataaaagcttatttatttatataagctatttttc 10184268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 21610059 - 21609997
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataa 74  Q
    ||||||| ||||||||||||  | ||||||| |||||| |||||| |||||||| ||||||||    
T  21610059 gaatatataattttcgttagtaagaacttataaattaaaataaaaacttatttatttgcataa 21609997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 22708366 - 22708432
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    |||||||||||||||| |  |  |||| |||||| |||||| |||||||| ||||||||||||||||    
T  22708366 atacaattttcgttagtgggagtttataaattaaaataaaaacttatttatttgcataagctatttt 22708432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 24419479 - 24419540
Alignment:
Q  14 atatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataag 75  Q
    |||||||||||||||| |   |||||||| ||||||||||| | |||||||| |||||||||    
T  24419479 atatacaattttcgttggtagaaacttataaattaacataataacttatttatttgcataag 24419540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 30534052 - 30534093
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagct 77  Q
    ||||||| |||||| ||||||||||||||| |||||||||||    
T  30534052 aacttataaattaatataaaagcttatttatttgcataagct 30534093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 1189463 - 1189531
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||| |||||||||| || |  |||| |||||| || |||||||||||| || |||||||||||||||    
T  1189463 atacacttttcgttagtgagagtttataaattaaaattaaagcttatttatttacataagctatttttc 1189531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 3832267 - 3832307
Alignment:
Q  44 aattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||| ||||||||||||||| || |||||||||||||||    
T  3832267 aattaaaataaaagcttatttatttacataagctatttttc 3832307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 17915025 - 17915093
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||||||  | |||||||  ||||| ||||||||||||||| ||  |||| |||||||||    
T  17915025 atacaattttcgttagtcagaacttatagattaaaataaaagcttatttatttatataaactatttttc 17915093  T

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Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 32615421 - 32615353
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| || | | ||| |||||| ||||||||||| ||| || |||||| ||||||||    
T  32615421 atacaattttcgttagtgagagcatataaattaaaataaaagcttacttatttacataagttatttttc 32615353  T

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Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 35111356 - 35111292
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatt 80  Q
    |||||||||||||||| || ||||||  |||||| ||||||| ||||||| || ||||| |||||    
T  35111356 atacaattttcgttagcgagaacttacgaattaagataaaagtttatttatttacataatctatt 35111292  T

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Target: scaffold0332 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 14755 - 14693
Alignment:
Q  13 aatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataag 75  Q
    ||||||||||||||||||| || ||||||| ||||||||| |||||||||||| |||||||||    
T  14755 aatatacaattttcgttagtgagaacttataaattaacatgaaagcttatttatttgcataag 14693  T

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Target: scaffold0512 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 4144 - 4212
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||||||||| |  ||||||| |||||||||||||||| ||| | ||||||||||||||||||    
T  4144 atacaattttcgttagtgggaacttataaattaacataaaagctcattgatttgcataagctatttttc 4212  T

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Target: scaffold0048 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 58874 - 58807
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctattttt 83  Q
    ||||||||| |||||| |||||||||| | ||||||||| ||| |||||| |||||||||||||||||    
T  58874 atacaatttccgttagtgaaaacttataatttaacataatagcatatttatttgcataagctattttt 58807  T

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Target: scaffold0015 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 48614 - 48568
Alignment:
Q  36 aacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||    
T  48614 aacttatgaattaacataaaagcttatttatttgcataagctatttt 48568  T

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Target: scaffold0157 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 24827 - 24895
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||| ||| |||| || ||||||| ||||||||||||| |||||||| |||||||||||| |||||    
T  24827 atacaatattcattagtgagaacttataaattaacataaaaacttatttatttgcataagctacttttc 24895  T

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Target: scaffold0100 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 38454 - 38391
Alignment:
Q  21 attttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||| || | ||||| |||||| ||||||||||||||| || |||||||||||||||    
T  38454 attttcgttagcgagagcttataaattaaaataaaagcttatttatttacataagctatttttc 38391  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 227783 - 227853
Alignment:
Q  12 gaatatacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttt 82  Q
    ||||||||||||||||||||  | | ||||| |||||||||||||||||| ||  ||||| ||||| ||||    
T  227783 gaatatacaattttcgttagtaagatcttatgaattaacataaaagcttaattctttgcacaagctctttt 227853  T

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Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 242646 - 242578
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||| ||||||||||| || | ||||| |||||| |||||| | |||||| || |||||||||||||||    
T  242646 atacgattttcgttagcgagagcttataaattaaaataaaaacctatttatttacataagctatttttc 242578  T

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Target: scaffold1367 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 1138 - 1206
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||| |||| |||| || |||||||   |||| ||||||||||||||| ||||||||| ||||||||    
T  1138 atacaaatttcattagtgagaacttatactttaatataaaagcttatttatttgcataagttatttttc 1206  T

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Target: scaffold0291 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 19635 - 19703
Alignment:
Q  16 atacaattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    |||||||||| ||||  |||| ||||| | |||| |||||| |||||||| || |||||||||||||||    
T  19635 atacaatttttgttaatgaaatcttataagttaaaataaaatcttatttatttacataagctatttttc 19703  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 24391 - 24327
Alignment:
Q  20 aattttcgttagagaaaacttatcaattaacataaaagcttatttaattgcataagctatttttc 84  Q
    ||||||||||||  ||||||| | ||||| ||||||||| |||||| |||||||| ||| |||||    
T  24391 aattttcgttagtaaaaacttgtgaattatcataaaagcctatttatttgcataaactacttttc 24327  T

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