View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15932_low_20 (Length: 473)
Name: NF15932_low_20
Description: NF15932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15932_low_20 |
 | |
|
| [»] chr3 (1 HSPs) |
| |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0475 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 417; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 417; E-Value: 0
Query Start/End: Original strand, 17 - 473
Target Start/End: Complemental strand, 1281678 - 1281222
Alignment:
| Q |
17 |
gagatctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccattt |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1281678 |
gagatctgttgtttatgtgaatttcggaagcattacagttatgactccagagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccattt |
1281579 |
T |
|
| Q |
117 |
ttgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggt |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1281578 |
ttgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggt |
1281479 |
T |
|
| Q |
217 |
gtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaat |
316 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
1281478 |
gtccacaagagaaagtgttgaaccacccttcaatcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagtgccaat |
1281379 |
T |
|
| Q |
317 |
gttgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagag |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1281378 |
gttgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagag |
1281279 |
T |
|
| Q |
417 |
gaggtggtgaagctgatcaatgaattgatagacggagatgaaggaaagaatatgaga |
473 |
Q |
| |
|
||||||| ||| |||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
1281278 |
gaggtggctaagttgatcaatgaattgatagccggggatgaaggaaagaatatgaga |
1281222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 306; Significance: 1e-172; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 10 - 471
Target Start/End: Complemental strand, 4617593 - 4617132
Alignment:
| Q |
10 |
aggagcagagatctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaa |
109 |
Q |
| |
|
|||||| | |||| |||||||||||||||||||| ||||||||||||||||| || |||||| | | |||||||||||||||| |||| ||| ||||||| |
|
|
| T |
4617593 |
aggagccgggatcagttgtttatgtgaatttcggcagcattacagttatgacacccgagcaattactggaatttgcttggggtttggccaattgcaagaa |
4617494 |
T |
|
| Q |
110 |
accatttttgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagca |
209 |
Q |
| |
|
| ||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||| | ||||||||| |||||||||||||||||||| |
|
|
| T |
4617493 |
atcatttttgtggatcataaggcctgatcttgtcattggtggctcagtgattttctcatctgagtttacaaatgaaattgcagatagaggcctaatagca |
4617394 |
T |
|
| Q |
210 |
agttggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggag |
309 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
4617393 |
agttggtgtccacaagacaaagtgttgaaccacccttcaatcggaggattcttgactcattgcggatggaattcaaccactgaaagtatatgcgctggag |
4617294 |
T |
|
| Q |
310 |
tgccaatgttgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaa |
409 |
Q |
| |
|
|||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
4617293 |
tgccaatgttgtgttggccattttttgccgaccagccaacagactgtagatttatttgtaatgaatgggagattggtatggaaatcgatacgaatgtgaa |
4617194 |
T |
|
| Q |
410 |
gagagaggaggtggtgaagctgatcaatgaattgatagacggagatgaaggaaagaatatga |
471 |
Q |
| |
|
|||||||||| ||| ||||||||||||||| |||||| ||||||| |||||||||| |||| |
|
|
| T |
4617193 |
gagagaggagttggcaaagctgatcaatgaagtgatagccggagataaaggaaagaaaatga |
4617132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 10 - 472
Target Start/End: Complemental strand, 4602360 - 4601898
Alignment:
| Q |
10 |
aggagcagagatctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaa |
109 |
Q |
| |
|
|||||| | |||| ||||||||||||||||| || ||||||||||||||||| || | ||| | ||||| ||||||||| |||| ||| || | || |
|
|
| T |
4602360 |
aggagccgggatccgttgtttatgtgaattttggcagcattacagttatgacaccccatcaattattagaattcgcttggggtttggccaattgccataa |
4602261 |
T |
|
| Q |
110 |
accatttttgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagca |
209 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| |
|
|
| T |
4602260 |
accatttttgtggatcattaggcctgatcttgtcattggtggctcagtgattttgtcatctgagtttacaaatgaaatttcagatagaggcctaatagca |
4602161 |
T |
|
| Q |
210 |
agttggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggag |
309 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| || |||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4602160 |
agttggtgtccacaagagaaagtgttgaaccacccttcgatcggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggag |
4602061 |
T |
|
| Q |
310 |
tgccaatgttgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaa |
409 |
Q |
| |
|
|||| |||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4602060 |
tgccgatgttgtgttggcctttttttgccgatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcgatacaaatgtgaa |
4601961 |
T |
|
| Q |
410 |
gagagaggaggtggtgaagctgatcaatgaattgatagacggagatgaaggaaagaatatgag |
472 |
Q |
| |
|
|||||||||| ||| |||||||||||||||| |||||| ||||||| |||| ||||| ||||| |
|
|
| T |
4601960 |
gagagaggagttggcgaagctgatcaatgaagtgatagccggagataaaggcaagaagatgag |
4601898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 10 - 445
Target Start/End: Complemental strand, 4564282 - 4563847
Alignment:
| Q |
10 |
aggagcagagatctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaa |
109 |
Q |
| |
|
|||||| | |||| ||||||||||||||||| |||||||||||||||||||| || | ||||| ||||||||||||||| |||| ||| |||| || |
|
|
| T |
4564282 |
aggagccgggatccgttgtttatgtgaattttggaagcattacagttatgacaccaaaacaactgttggaatttgcttgggggttggccaattgcaataa |
4564183 |
T |
|
| Q |
110 |
accatttttgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagca |
209 |
Q |
| |
|
||| ||||||||||||| ||||||||| ||||||||||| |||||||| ||||||||||||| |||| |||||||||||||||||||||| |||| ||| |
|
|
| T |
4564182 |
accctttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttgtcatctgagtttgtgaatgaaatttcagatagaggcttaattgca |
4564083 |
T |
|
| Q |
210 |
agttggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggag |
309 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| ||| | || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4564082 |
agttggtgtccacaggagaaagtattgaaccacccttcaattggcggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggag |
4563983 |
T |
|
| Q |
310 |
tgccaatgttgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaa |
409 |
Q |
| |
|
| |||||||||||||||||||| |||| ||||||||||||| |||||||| |||||| ||||||||| ||||||| |||||||||||||| ||||| || |
|
|
| T |
4563982 |
ttccaatgttgtgttggccattctttggtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaatcgatacgaatgtaaa |
4563883 |
T |
|
| Q |
410 |
gagagaggaggtggtgaagctgatcaatgaattgat |
445 |
Q |
| |
|
|||||| ||||||| ||| || ||||||||||||| |
|
|
| T |
4563882 |
gagagaagaggtggagaaacttgtcaatgaattgat |
4563847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 81 - 472
Target Start/End: Complemental strand, 4561005 - 4560615
Alignment:
| Q |
81 |
tttgcttggggtctggctaatagcaagaaaccatttttgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcga |
180 |
Q |
| |
|
|||||||||||| |||| || ||||||||||||||||| ||||||| ||||||||||||||||||||| ||||| ||| |||| |||||||| ||| || |
|
|
| T |
4561005 |
tttgcttggggtttggccaacagcaagaaaccatttttatggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttt-ga |
4560907 |
T |
|
| Q |
181 |
atgaaatttcagatagaggcctaatagcaagttggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaa |
280 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4560906 |
aagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaa |
4560807 |
T |
|
| Q |
281 |
ttcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaag |
380 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || |||| |||| |||||| |||||||||||| |
|
|
| T |
4560806 |
ctcaaccactgaaagcatatgtgctggagttccaatgttgtgttggccattttttgcagatcagccagcaaactgaagatatatttgcaatgaatggaag |
4560707 |
T |
|
| Q |
381 |
attggtatggaaatcgatacaaatgtgaagagagaggaggtggtgaagctgatcaatgaattgatagacggagatgaaggaaagaatatgag |
472 |
Q |
| |
|
||||| | ||||| ||||||||||| ||||| ||||| |||| ||| ||| ||||||||||||| | ||||| |||||||||| ||||| |
|
|
| T |
4560706 |
attggaaacgaaattgatacaaatgtaaagagggaggacgtggagaaactggtcaatgaattgatgtcctgagataaaggaaagaagatgag |
4560615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 18 - 472
Target Start/End: Complemental strand, 4574871 - 4574417
Alignment:
| Q |
18 |
agatctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttt |
117 |
Q |
| |
|
||||||||||||||||| ||||| || ||||| || |||||| ||| ||| | || || |||||||||||| |||| || ||||| ||||| |||| |
|
|
| T |
4574871 |
agatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttt |
4574772 |
T |
|
| Q |
118 |
tgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtg |
217 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||||| ||| |||| |||||||| ||| ||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4574771 |
tgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtg |
4574672 |
T |
|
| Q |
218 |
tccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatg |
317 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |
|
|
| T |
4574671 |
tccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatg |
4574572 |
T |
|
| Q |
318 |
ttgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagagg |
417 |
Q |
| |
|
|| ||||||||||||||| | ||||||||| || |||| |||| |||||| ||||||||| ||||||| | |||||||||||| ||||| ||||| |||| |
|
|
| T |
4574571 |
ttatgttggccatttttttcggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaaatcgatactaatgtaaagagggagg |
4574472 |
T |
|
| Q |
418 |
aggtggtgaagctgatcaatgaattgatagacggagatgaaggaaagaatatgag |
472 |
Q |
| |
|
|||||| ||| ||| ||||||||||||| ||||||| |||||||||| ||||| |
|
|
| T |
4574471 |
aggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgag |
4574417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 19 - 445
Target Start/End: Complemental strand, 4461685 - 4461259
Alignment:
| Q |
19 |
gatctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccattttt |
118 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||| |||||||||||||| || ||||| || |||||||||||| ||||| ||||||||||||| ||||| |
|
|
| T |
4461685 |
gatctgttgtctatgtaaattttggcagcatcacagttatgactcctgatcaactgttagagtttgcttggggtttggctgatagcaagaaacccttttt |
4461586 |
T |
|
| Q |
119 |
gtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgt |
218 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| | |||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
4461585 |
atggatcattaggcctgatcttgtcattggcggctcgtttattttgtcatctgagtttgtgaatgaaatttcagatagaggcctaatagcaagctggtgt |
4461486 |
T |
|
| Q |
219 |
ccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgt |
318 |
Q |
| |
|
|| |||||| ||||| |||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4461485 |
ccgcaagagcaagtactgaaccacccttcaattggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgtgctggagtgccgatgt |
4461386 |
T |
|
| Q |
319 |
tgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagagga |
418 |
Q |
| |
|
||||||||||||| |||| |||||||||| || |||||||||||||||| || ||||| ||||||| | |||||||||| | |||||||||| || || |
|
|
| T |
4461385 |
tgtgttggccattctttggtgatcagccagcaaactgtagatttatttgcaacaaatgggagattggacttgaaatcgataaagatgtgaagagggatga |
4461286 |
T |
|
| Q |
419 |
ggtggtgaagctgatcaatgaattgat |
445 |
Q |
| |
|
||||| |||| || |||| |||||||| |
|
|
| T |
4461285 |
ggtggagaagttggtcaacgaattgat |
4461259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 19 - 445
Target Start/End: Original strand, 4514691 - 4515117
Alignment:
| Q |
19 |
gatctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccattttt |
118 |
Q |
| |
|
|||||||||||||||| ||||| || ||||| || ||||| |||||||| || | || |||||||||||| |||| |||||||||||| | ||||| |
|
|
| T |
4514691 |
gatctgttgtttatgttaattttggtagcatcacgattatgtctccggagaaattgttagagtttgcttggggtttggccaatagcaagaaaaccttttt |
4514790 |
T |
|
| Q |
119 |
gtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgt |
218 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||| ||||||| ||||| |||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4514791 |
atggatcattaggcctgatcttgtcattggtggctcagtggttttgtcgtctgagtttgtgaatgaaattgcagatagaggcctaatagcaagttggtgt |
4514890 |
T |
|
| Q |
219 |
ccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgt |
318 |
Q |
| |
|
|||||||||||||| ||||||||||| ||| | || |||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
4514891 |
ccacaagagaaagttttgaaccacccttcaattggcggattcttgactcattgcggatggaactcaaccactgagagcatatgcgctggagtgccaatgc |
4514990 |
T |
|
| Q |
319 |
tgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagagga |
418 |
Q |
| |
|
| ||||||| ||| |||| |||||| |||||| |||||||||||||||| ||||||||| ||||||| || |||||||||| ||||||||||||||||| |
|
|
| T |
4514991 |
tttgttggcaattctttggtgatcaaccaacaaactgtagatttatttgcaatgaatgggagattgggatcgaaatcgatatgaatgtgaagagagagga |
4515090 |
T |
|
| Q |
419 |
ggtggtgaagctgatcaatgaattgat |
445 |
Q |
| |
|
||| | ||||| ||||||||||||| |
|
|
| T |
4515091 |
ggttgaaaagcttgtcaatgaattgat |
4515117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 24 - 472
Target Start/End: Original strand, 4613293 - 4613741
Alignment:
| Q |
24 |
gttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgtgga |
123 |
Q |
| |
|
||||||||||||||||| || ||||| || ||||||||| | || |||| || |||||||||||| |||| ||||||||| |||| |||||||||| |
|
|
| T |
4613293 |
gttgtttatgtgaattttgggagcatgaccgttatgactgcagaaaaactattagagtttgcttggggtttggcgaatagcaagcaaccctttttgtgga |
4613392 |
T |
|
| Q |
124 |
tcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtccaca |
223 |
Q |
| |
|
||| |||||||||||||||||||||||||||||| |||||||||| || |||| ||||||||||||||||||||||||||| || || |||||||| || |
|
|
| T |
4613393 |
tcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcgagctggtgtcctca |
4613492 |
T |
|
| Q |
224 |
agagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttgtgt |
323 |
Q |
| |
|
|||| ||||||| |||||||| ||| | || ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4613493 |
agagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgt |
4613592 |
T |
|
| Q |
324 |
tggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggaggtgg |
423 |
Q |
| |
|
||||||||||| || ||||||||| || |||| |||| ||| || ||||||||| | ||||| |||||||| || || |||||||||||||| ||||| | |
|
|
| T |
4613593 |
tggccatttttcgcggatcagccagcaaactgcagatatatatgcaatgaatgggaaattgggatggaaattgacaccaatgtgaagagagatgaggtag |
4613692 |
T |
|
| Q |
424 |
tgaagctgatcaatgaattgatagacggagatgaaggaaagaatatgag |
472 |
Q |
| |
|
||||||| ||||||||||||| | ||||| |||||||||| ||||| |
|
|
| T |
4613693 |
agaagctggtcaatgaattgatggtgggagagaaaggaaagaaaatgag |
4613741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 18 - 445
Target Start/End: Original strand, 4266735 - 4267162
Alignment:
| Q |
18 |
agatctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttt |
117 |
Q |
| |
|
||||||||||||||||| ||||| || ||||| ||||||||| | | ||| | || || |||||||||||| |||| || |||||||| || |||| |
|
|
| T |
4266735 |
agatctgttgtttatgtaaattttggtagcatcacagttatgtcacgagagaagctcttagagtttgcttggggtttggccaacagcaagaacccttttt |
4266834 |
T |
|
| Q |
118 |
tgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtg |
217 |
Q |
| |
|
||||||| | ||||||||||||||||||||| |||||||| ||||||||||||| ||| || ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4266835 |
tgtggataattaggcctgatcttgtcattgggggctcagttgttttgtcatctgatttttttaaagaaatttcagatagaggactaatagcaagttggtg |
4266934 |
T |
|
| Q |
218 |
tccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatg |
317 |
Q |
| |
|
||||||||| ||||| ||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4266935 |
tccacaagataaagtgttgaaccacccttcgattggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatg |
4267034 |
T |
|
| Q |
318 |
ttgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagagg |
417 |
Q |
| |
|
|||||||||||||| |||| ||||||||||||| |||||||||||||||| |||||||| ||||||| | |||||| ||||||||||||||||||| | |
|
|
| T |
4267035 |
ttgtgttggccattctttggtgatcagccaacaaactgtagatttatttgctatgaatgggagattggactcgaaatcaatacaaatgtgaagagagatg |
4267134 |
T |
|
| Q |
418 |
aggtggtgaagctgatcaatgaattgat |
445 |
Q |
| |
|
| || | |||| | ||||||||||||| |
|
|
| T |
4267135 |
acgtcgagaagttagtcaatgaattgat |
4267162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 25 - 473
Target Start/End: Complemental strand, 4622698 - 4622250
Alignment:
| Q |
25 |
ttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgtggat |
124 |
Q |
| |
|
||||||| |||||||| || ||||||||||| ||||||| || ||||| || |||||||||||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
4622698 |
ttgtttacgtgaattttggcagcattacagtgatgactcgagatcaactattagagtttgcttggggtttggctgatagcaagaaaccctttttgtggat |
4622599 |
T |
|
| Q |
125 |
cactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtccacaa |
224 |
Q |
| |
|
|| ||||||||| |||||||| |||||||| | |||||||||||||| |||| |||||||||||||| |||||||||||| ||| |||||||||||||| |
|
|
| T |
4622598 |
cattaggcctgaccttgtcatgggcggctcgtttattttgtcatctgagtttgagaatgaaatttcaggtagaggcctaatcgcaggttggtgtccacaa |
4622499 |
T |
|
| Q |
225 |
gagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttgtgtt |
324 |
Q |
| |
|
||| ||||| | |||||||| || | |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
4622498 |
gaggaagtacttaaccaccctgcaattggtggattcttgactcattgtggatggaattcaaccaccgaaagcatatgtgctggagtttcaatgctgtgtt |
4622399 |
T |
|
| Q |
325 |
ggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggaggtggt |
424 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||| ||| || ||| |||| ||||||| || |||||| |||| |||||||| |||||||||||| |
|
|
| T |
4622398 |
ggccatttttcgctgatcagccaacaaactgtagatatatctgcaattcatgggagattggaatcgaaatcaatactaatgtgaaaagagaggaggtgtc |
4622299 |
T |
|
| Q |
425 |
gaagctgatcaatgaattgatagacggagatgaaggaaagaatatgaga |
473 |
Q |
| |
|
||| ||||||||||||||||| |||||| |||||||||| |||||| |
|
|
| T |
4622298 |
gaatctgatcaatgaattgatgtcgggagataaaggaaagaagatgaga |
4622250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 21 - 415
Target Start/End: Complemental strand, 4506417 - 4506023
Alignment:
| Q |
21 |
tctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgt |
120 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||| ||||| |||||||| || || || |||||||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
4506417 |
tctgttgtttatgtgaattttggaagcatcacaattatgtctccggagaaatttttagagtttgcttggggtttggccaatagcaagaaaccctttttgt |
4506318 |
T |
|
| Q |
121 |
ggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtcc |
220 |
Q |
| |
|
|||||| ||||||||||||||| ||||| ||||||||| ||||||| || || ||||| |||||||||||||||||| |||| |||||||| |||||| | |
|
|
| T |
4506317 |
ggatcattaggcctgatcttgtaattggtggctcagtggttttgtcttcagagtttgcaaatgaaatttcagatagaagccttatagcaagctggtgttc |
4506218 |
T |
|
| Q |
221 |
acaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttg |
320 |
Q |
| |
|
|||||||||||| || || ||||| ||| | ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| || |
|
|
| T |
4506217 |
acaagagaaagtgttaaatcacccttcaattggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgctg |
4506118 |
T |
|
| Q |
321 |
tgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagaga |
415 |
Q |
| |
|
|||||||| || |||| |||||| |||||| |||||||||||||||| ||||||| | ||||||| || ||||| ||||| |||||||| ||||| |
|
|
| T |
4506117 |
tgttggccgttctttggtgatcaaccaacaaactgtagatttatttgcaatgaattggagattggaatcgaaattgatactaatgtgaatagaga |
4506023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 21 - 440
Target Start/End: Original strand, 4259726 - 4260145
Alignment:
| Q |
21 |
tctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgt |
120 |
Q |
| |
|
||||||||||| |||||||| || |||||||||||||||||||| || ||| || || ||||||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
4259726 |
tctgttgtttacgtgaattttggcagcattacagttatgactccagatcaatttttagagtttgcttggggattggccaatagcaagaaaccctttttgt |
4259825 |
T |
|
| Q |
121 |
ggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtcc |
220 |
Q |
| |
|
|||||| ||||||||| || | ||||| ||||| | |||||||||||||| |||| || ||||||||| |||||||||||||| || || |||||||| |
|
|
| T |
4259826 |
ggatcattaggcctgacctcattattggtggctcctttattttgtcatctgagtttgagagtgaaatttcggatagaggcctaatcgcgagctggtgtcc |
4259925 |
T |
|
| Q |
221 |
acaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttg |
320 |
Q |
| |
|
|||||| ||||| |||||||| | ||||| ||||||||||| ||||||||||||||||| ||||||| ||||||||| ||||| | ||| ||||||||| |
|
|
| T |
4259926 |
gcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatggaactcaaccattgaaagcatttgtgccgaagttccaatgttg |
4260025 |
T |
|
| Q |
321 |
tgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggagg |
420 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||| || ||||| |||| |||||||| ||||| |||| |
|
|
| T |
4260026 |
tgttggccattttttgctgatcagccaacaaactgtagatttatttgtaacgaatgggagattggaattgaaattaatactaatgtgaaaagagatgagg |
4260125 |
T |
|
| Q |
421 |
tggtgaagctgatcaatgaa |
440 |
Q |
| |
|
||| |||||||||||||||| |
|
|
| T |
4260126 |
tggcgaagctgatcaatgaa |
4260145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 21 - 472
Target Start/End: Complemental strand, 4626511 - 4626060
Alignment:
| Q |
21 |
tctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgt |
120 |
Q |
| |
|
||||||||||||||||| || || ||| ||| |||||||||||| || |||| || |||||||||||| ||||| ||||||||||||| ||||||| |
|
|
| T |
4626511 |
tctgttgtttatgtgaactttggcagcgttatagttatgactccacagaaactgttagagtttgcttggggtttggctgatagcaagaaaccctttttgt |
4626412 |
T |
|
| Q |
121 |
ggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtcc |
220 |
Q |
| |
|
|||||| ||||||||||||||| ||||| |||||| | |||| |||||| || |||| ||||||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
4626411 |
ggatcattaggcctgatcttgtgattggtggctcatttatttcgtcatccgagtttgagaatgaaatttcagatagaggcctaatcgcaagctggtgtcc |
4626312 |
T |
|
| Q |
221 |
acaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttg |
320 |
Q |
| |
|
|||||||||||| ||||||| || ||| | ||||||||||| |||||||| |||||||| ||||||| |||||||||||| |||||||| |||||| || |
|
|
| T |
4626311 |
gcaagagaaagtactgaaccatccttcaattggtggattcttaactcattgtggatggaactcaaccattgaaagcatatgcgctggagttccaatgctg |
4626212 |
T |
|
| Q |
321 |
tgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggagg |
420 |
Q |
| |
|
||||||||| ||||||||||||||||||| | ||||||| |||||| ||||||||| ||||||| |||||||||||| | ||||||||||| |||| || |
|
|
| T |
4626211 |
tgttggccaaattttgctgatcagccaacaaattgtagatatatttgcaatgaatgggagattggaatggaaatcgatgctaatgtgaagagggaggggg |
4626112 |
T |
|
| Q |
421 |
tggtgaagctgatcaatgaattgatagacggagatgaaggaaagaatatgag |
472 |
Q |
| |
|
| | ||| |||||||||| |||||| | |||||| | |||||||| ||||| |
|
|
| T |
4626111 |
tagagaaactgatcaatgcattgatggcaggagataacggaaagaagatgag |
4626060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 24 - 445
Target Start/End: Complemental strand, 4586193 - 4585772
Alignment:
| Q |
24 |
gttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgtgga |
123 |
Q |
| |
|
||||||||||||||||| || |||| |||||||||||| | || |||| || |||||||||||| |||| ||||||||| ||| ||||| |||| |
|
|
| T |
4586193 |
gttgtttatgtgaattttgggagcacaacagttatgactacagaaaaactattagagtttgcttggggtttggccaatagcaagcaacattttttatgga |
4586094 |
T |
|
| Q |
124 |
tcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtccaca |
223 |
Q |
| |
|
||| ||| ||||||||||||||||| || || || ||||||||||||| ||| ||||||||||||||||||||||||||| || ||||||| || || |
|
|
| T |
4586093 |
tcattagacctgatcttgtcattggtggttccttggttttgtcatctgagtttaagaatgaaatttcagatagaggcctaatcgcgggttggtgcccgca |
4585994 |
T |
|
| Q |
224 |
agagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttgtgt |
323 |
Q |
| |
|
|||| |||||||||||||||| ||| | ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4585993 |
agagcaagtattgaaccacccttcaattggtggattcttgactcactgtggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgt |
4585894 |
T |
|
| Q |
324 |
tggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggaggtgg |
423 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||| ||||||| ||||||||| ||||||| |||||| | || || |||||||||||||||||||||| |
|
|
| T |
4585893 |
tggccattcattgctgatcagccaacaaactgtagaattatttgcaatgaatgggagattgggatggaagttgacaccaatgtgaagagagaggaggtgg |
4585794 |
T |
|
| Q |
424 |
tgaagctgatcaatgaattgat |
445 |
Q |
| |
|
|||| || ||||||||||||| |
|
|
| T |
4585793 |
agaagttggtcaatgaattgat |
4585772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 21 - 445
Target Start/End: Complemental strand, 4458155 - 4457730
Alignment:
| Q |
21 |
tctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaa-ccatttttg |
119 |
Q |
| |
|
|||||| ||||||| ||||| |||||||| ||||||||| ||| ||| | || ||||||||||||| | |||| || ||||||||| || |||||| |
|
|
| T |
4458155 |
tctgttatttatgtaaattttggaagcatcacagttatgtctcaagagaagctcttagaatttgcttgggttttggccaacagcaagaaaaccttttttg |
4458056 |
T |
|
| Q |
120 |
tggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtc |
219 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||| || |||||||||| || |||| |||||||| ||| ||||||||| |||||||||||||||||| |
|
|
| T |
4458055 |
tggataactaggcctgatcttgtcattggtggctcggttgttttgtcatcggattttgtgaatgaaacttctgatagaggcttaatagcaagttggtgtc |
4457956 |
T |
|
| Q |
220 |
cacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgtt |
319 |
Q |
| |
|
||||||| ||||| ||||||||||| ||| |||| ||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||||||| | |
|
|
| T |
4457955 |
cacaagataaagtgttgaaccacccttcaatcggaggattcttgactcattgtggatgaaactcaaccactgaaagcatatgcgctggagtgccaatgct |
4457856 |
T |
|
| Q |
320 |
gtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggag |
419 |
Q |
| |
|
| |||||||||| |||| |||| |||||||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
4457855 |
gcgttggccattctttggtgataagccaacaagttgtagatttatttgcaatgaatgagagattgggatggaaatcgatacaaatgtgaagagagatgag |
4457756 |
T |
|
| Q |
420 |
gtggtgaagctgatcaatgaattgat |
445 |
Q |
| |
|
|||| |||| | ||||||||||||| |
|
|
| T |
4457755 |
gtggagaagttagtcaatgaattgat |
4457730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 24 - 472
Target Start/End: Complemental strand, 4592788 - 4592340
Alignment:
| Q |
24 |
gttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgtgga |
123 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||| | ||| || | || |||||||||||| |||| ||| |||| ||||| |||||||||| |
|
|
| T |
4592788 |
gttgtttatgtgaatttcggcagccttacagttatgaatgaagagaaaatgttagagtttgcttggggtttggccaattgcaataaaccttttttgtgga |
4592689 |
T |
|
| Q |
124 |
tcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtccaca |
223 |
Q |
| |
|
||| ||||||||||||||||||||| ||| || | |||||||||| || |||| |||||||||||||||||||||| |||| || || |||||||| || |
|
|
| T |
4592688 |
tcattaggcctgatcttgtcattggtggcacaattgttttgtcatcggagtttgtgaatgaaatttcagatagaggcgtaatcgcgagctggtgtcctca |
4592589 |
T |
|
| Q |
224 |
agagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttgtgt |
323 |
Q |
| |
|
|||| ||||||| |||||||| ||| | |||||||||||||||||||| |||||||| |||||||||||||| |||||||||||| | |||||||||||| |
|
|
| T |
4592588 |
agagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggaattccaatgttgtgt |
4592489 |
T |
|
| Q |
324 |
tggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggaggtgg |
423 |
Q |
| |
|
|||||||| ||| ||||||||||||| |||||||| |||||| ||||||||| ||||||| |||||||| ||||| ||||| |||||||||||||||| |
|
|
| T |
4592488 |
tggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattgatacgaatgtaaagagagaggaggtgg |
4592389 |
T |
|
| Q |
424 |
tgaagctgatcaatgaattgatagacggagatgaaggaaagaatatgag |
472 |
Q |
| |
|
||| || |||||||||||||| | ||||| |||||||||| ||||| |
|
|
| T |
4592388 |
agaaacttatcaatgaattgatggtgggagagaaaggaaagaagatgag |
4592340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 445
Target Start/End: Complemental strand, 4470365 - 4469939
Alignment:
| Q |
19 |
gatctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccattttt |
118 |
Q |
| |
|
|||||||||| ||||| |||||||| ||| | ||||||||| |||| ||| |||| || |||||||||||| |||| ||||||||| |||| ||||| |
|
|
| T |
4470365 |
gatctgttgtctatgtaaatttcggcagcgtcacagttatgtctccagagaaactgttagagtttgcttggggtttggcaaatagcaagcaacccttttt |
4470266 |
T |
|
| Q |
119 |
gtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgt |
218 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||||| || |||| ||||| || ||| |||| ||||||||||||||||||||| | | |||||| |
|
|
| T |
4470265 |
gtggatcattaggcccgatcttgtcattggcggctcggtagttttctcatcagagattgtaaatggaatttcagatagaggcctaatcgtgaactggtgt |
4470166 |
T |
|
| Q |
219 |
ccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgt |
318 |
Q |
| |
|
|| |||||| ||||| |||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4470165 |
cctcaagagcaagtactgaaccacccttcaatcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgt |
4470066 |
T |
|
| Q |
319 |
tgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagagga |
418 |
Q |
| |
|
||||||||||||| |||| |||||||| | || | |||||||||||||| ||||||||| ||||||| | |||||||||| | ||||||||||||| || |
|
|
| T |
4470065 |
tgtgttggccattctttggtgatcagctagcaaattgtagatttatttgcaatgaatgggagattggacttgaaatcgataaagatgtgaagagagatga |
4469966 |
T |
|
| Q |
419 |
ggtggtgaagctgatcaatgaattgat |
445 |
Q |
| |
|
||||| |||||| ||||||||||||| |
|
|
| T |
4469965 |
ggtggagaagctagtcaatgaattgat |
4469939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 21 - 472
Target Start/End: Complemental strand, 4516881 - 4516430
Alignment:
| Q |
21 |
tctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgt |
120 |
Q |
| |
|
||||| |||||||||||||| |||||||| || || |||||||| || ||||| || || ||||||||| |||| || ||||||||||| ||||||| |
|
|
| T |
4516881 |
tctgtagtttatgtgaattttggaagcatcacggtcatgactccagatcaactgttagagttcgcttggggtttggccaacagcaagaaaccttttttgt |
4516782 |
T |
|
| Q |
121 |
ggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtcc |
220 |
Q |
| |
|
|||| | ||||||||| ||||||||||| ||||| || ||||||||||| || |||| |||||||| ||| ||||||||| |||||||||| |||||||| |
|
|
| T |
4516781 |
ggattattaggcctgaccttgtcattggtggctcggttattttgtcatccgattttgtgaatgaaacttcggatagaggcgtaatagcaagctggtgtcc |
4516682 |
T |
|
| Q |
221 |
acaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttg |
320 |
Q |
| |
|
||||||||||| |||||||| || ||||| || ||||||||||||||||| |||||||| || || | |||||||| ||||| ||||| ||||||||| |
|
|
| T |
4516681 |
gcaagagaaagtgttgaaccatccttcagttggaggattcttgactcattgtggatggaactccacaatggaaagcatctgtgccggagtaccaatgttg |
4516582 |
T |
|
| Q |
321 |
tgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggagg |
420 |
Q |
| |
|
|||||||| ||||||||||| ||||||||| | || |||| |||||| ||||||||| ||||||| ||||| ||||| ||||||||||||||||||| |
|
|
| T |
4516581 |
tgttggcctttttttgctgagcagccaacaaattgcagatatatttgcaatgaatgggagattggagcagaaattgataccaatgtgaagagagaggagg |
4516482 |
T |
|
| Q |
421 |
tggtgaagctgatcaatgaattgatagacggagatgaaggaaagaatatgag |
472 |
Q |
| |
|
||| |||||||||||||||||| || | |||||| |||||||||| ||||| |
|
|
| T |
4516481 |
tggagaagctgatcaatgaattaatggtgggagataaaggaaagaagatgag |
4516430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 20 - 472
Target Start/End: Complemental strand, 3172302 - 3171850
Alignment:
| Q |
20 |
atctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttg |
119 |
Q |
| |
|
||||||||||||||| ||||| || ||||| | ||||||| ||| ||| || | || |||||||||||| | || || ||||||||||| |||||| |
|
|
| T |
3172302 |
atctgttgtttatgtaaattttggcagcatcatagttatgtctcaagagaaattattagagtttgcttggggtttagccaacagcaagaaaccctttttg |
3172203 |
T |
|
| Q |
120 |
tggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtc |
219 |
Q |
| |
|
||||| | ||||||||||||||||||||| ||||| || |||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3172202 |
tggattattaggcctgatcttgtcattggtggctcggttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtc |
3172103 |
T |
|
| Q |
220 |
cacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgtt |
319 |
Q |
| |
|
| ||||||||||| |||||||| || ||| | || |||||||||||||| ||||||||||| |||||||| ||||| ||||||||||| |||||||||| |
|
|
| T |
3172102 |
cgcaagagaaagtgttgaaccatccttcaattggcggattcttgactcactgcggatggaactcaaccacggaaagtgtatgtgctggaatgccaatgtt |
3172003 |
T |
|
| Q |
320 |
gtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggag |
419 |
Q |
| |
|
|||| ||||||||||||||||||| ||| | || ||||| ||||||| | |||||||||||||| |||||||| ||||| ||||| ||||||| |||| |
|
|
| T |
3172002 |
gtgtaggccattttttgctgatcaaccacctaacagtagaattatttgccaagaatggaagattgggatggaaattgataccaatgtaaagagaggggag |
3171903 |
T |
|
| Q |
420 |
gtggtgaagctgatcaatgaattgatagacggagatgaaggaaagaatatgag |
472 |
Q |
| |
|
|| | ||| |||||||| |||||||| | ||||| |||||||||| ||||| |
|
|
| T |
3171902 |
gtagagaaactgatcaacgaattgatggtgggagagaaaggaaagaagatgag |
3171850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 19 - 443
Target Start/End: Complemental strand, 4481255 - 4480831
Alignment:
| Q |
19 |
gatctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccattttt |
118 |
Q |
| |
|
|||||||||||||||| ||||| || ||||| ||| ||||| ||| ||| |||| || |||||||||||| | || |||||||| ||| ||||| |
|
|
| T |
4481255 |
gatctgttgtttatgtaaattttggcagcatcacaattatgtctcaagagaaactcttagagtttgcttggggttttgccaatagcaaaaaaaacttttt |
4481156 |
T |
|
| Q |
119 |
gtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgt |
218 |
Q |
| |
|
|||||| | |||| || ||||||||||||| ||||||||| | ||||||||||| | | ||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4481155 |
gtggattattaggtctaatcttgtcattggtggctcagtggtgttgtcatctgagtatttgaaagaaatttcaaatagaggcctaatagcaagttggtgt |
4481056 |
T |
|
| Q |
219 |
ccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgt |
318 |
Q |
| |
|
|||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
4481055 |
ccacaagagaaagttttgaaccacccttcaatcggcggattcttgactcattgcggatggaactcaaccactgaaagtgtatgtgctggagtgccaatgt |
4480956 |
T |
|
| Q |
319 |
tgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagagga |
418 |
Q |
| |
|
||||||||||||| ||||| ||||||||| | || ||||| ||||||| ||||||||| ||||||| | ||||||||||| |||||||||||||| || |
|
|
| T |
4480955 |
tgtgttggccattctttgccgatcagccacctaaccgtagaattatttgcaatgaatgggagattggactcgaaatcgataccaatgtgaagagagaaga |
4480856 |
T |
|
| Q |
419 |
ggtggtgaagctgatcaatgaattg |
443 |
Q |
| |
|
|||| || | | |||||||||||| |
|
|
| T |
4480855 |
tgtggagaggttaatcaatgaattg |
4480831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 21 - 445
Target Start/End: Complemental strand, 4579992 - 4579568
Alignment:
| Q |
21 |
tctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgt |
120 |
Q |
| |
|
|||||||||||||||||||| || ||| | |||||||||||| | || |||| || ||||| |||||| | || ||||||||| |||| ||||||| |
|
|
| T |
4579992 |
tctgttgtttatgtgaattttgggagcttgacagttatgactgcagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgt |
4579893 |
T |
|
| Q |
121 |
ggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtcc |
220 |
Q |
| |
|
|||||| |||||| ||||||||||| |||||||||| |||||||||| || |||| |||||||||||||||||||||||||||| | || |||||||| |
|
|
| T |
4579892 |
ggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaataacgagctggtgtcc |
4579793 |
T |
|
| Q |
221 |
acaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttg |
320 |
Q |
| |
|
|||||| ||||| |||||||||| ||| | ||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||| ||||||||| |
|
|
| T |
4579792 |
gcaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcggatggaactcaatcactgaaagcatatctgctggagttccaatgttg |
4579693 |
T |
|
| Q |
321 |
tgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggagg |
420 |
Q |
| |
|
|||||||||||||| |||||||| ||| | ||| |||| | | || ||| |||||| ||||| || |||||||| || ||||||||||||||||||| |
|
|
| T |
4579692 |
tgttggccatttttcgctgatcacccagtaagctgcagatatttatgcaatacatggaaaattggaattgaaatcgacactaatgtgaagagagaggagg |
4579593 |
T |
|
| Q |
421 |
tggtgaagctgatcaatgaattgat |
445 |
Q |
| |
|
||| ||||||| | ||||||||||| |
|
|
| T |
4579592 |
tggagaagctggttaatgaattgat |
4579568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 81 - 472
Target Start/End: Complemental strand, 4598671 - 4598280
Alignment:
| Q |
81 |
tttgcttggggtctggctaatagcaagaaaccatttttgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcga |
180 |
Q |
| |
|
|||||||||||| |||| |||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| || |||||||||| || |||| || |
|
|
| T |
4598671 |
tttgcttggggtttggccaatagcaagaaaccctttttgtggatcattaggcctgatcttgtcattggtggctcggttgttttgtcatcggagtttgtga |
4598572 |
T |
|
| Q |
181 |
atgaaatttcagatagaggcctaatagcaagttggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaa |
280 |
Q |
| |
|
|||||||||||||||||||| || | ||||| ||||||| |||||| ||||||| ||||| || ||| | ||||||||||| ||||||||||||||||| |
|
|
| T |
4598571 |
atgaaatttcagatagaggcttagttgcaagctggtgtctgcaagagcaagtattaaaccatccttcaattggtggattcttaactcattgcggatggaa |
4598472 |
T |
|
| Q |
281 |
ttcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaag |
380 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||||||||| || ||||| || ||||||| | | |||| |||| |||||| ||||||||| || |
|
|
| T |
4598471 |
ctcaaccactgaaagtatatgtgccggagtgccaatgttgtgttgtccctttttcgcggatcagcaagccaactgcagatatatttgcaatgaatgggag |
4598372 |
T |
|
| Q |
381 |
attggtatggaaatcgatacaaatgtgaagagagaggaggtggtgaagctgatcaatgaattgatagacggagatgaaggaaagaatatgag |
472 |
Q |
| |
|
||||| || |||| || || |||||||||||||||||||||| ||||||| |||| |||||||| |||||| |||||||||| ||||| |
|
|
| T |
4598371 |
attggaatcaaaattgaaactaatgtgaagagagaggaggtggagaagctggtcaacgaattgatgtcgggagataaaggaaagaaaatgag |
4598280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 21 - 445
Target Start/End: Original strand, 4256196 - 4256608
Alignment:
| Q |
21 |
tctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgt |
120 |
Q |
| |
|
||||||||||| |||||||| || |||||||||||||||||||| || ||||| || ||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
4256196 |
tctgttgtttacgtgaattttggcagcattacagttatgactccagatcaactgttagagtttgcttggggattggccaatagcaagaaaccatttttgt |
4256295 |
T |
|
| Q |
121 |
ggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtcc |
220 |
Q |
| |
|
| |||| ||||||||| || |||||||| ||||| | |||||||||||||| ||| | |||||||| ||||| | ||||||||||| |
|
|
| T |
4256296 |
gtatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgagttt-------------cggatagaggactaatcgagagttggtgtcc |
4256382 |
T |
|
| Q |
221 |
acaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttg |
320 |
Q |
| |
|
|||||| ||||| |||||||| | ||||| |||||||||||||||||||| |||||||| ||||||| ||||||||| ||||| ||||| ||||||||| |
|
|
| T |
4256383 |
gcaagagcaagtactgaaccactcttcagttggtggattcttgactcattgaggatggaactcaaccattgaaagcatttgtgccggagttccaatgttg |
4256482 |
T |
|
| Q |
321 |
tgttggccattttttgctgatcag-ccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggag |
419 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||||||||| |||||| ||||||| || |||||| |||| |||||||||||||| ||| |
|
|
| T |
4256483 |
tgttggccattttttgctgatcagaccaacaaactgtagatttatttgtagcgaatgggagattggaattgaaatcaatactaatgtgaagagagatgag |
4256582 |
T |
|
| Q |
420 |
gtggtgaagctgatcaatgaattgat |
445 |
Q |
| |
|
|||| ||| ||||||||||||||||| |
|
|
| T |
4256583 |
gtggagaatctgatcaatgaattgat |
4256608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 24 - 466
Target Start/End: Complemental strand, 4557682 - 4557240
Alignment:
| Q |
24 |
gttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgtgga |
123 |
Q |
| |
|
||||||||||||||||| || ||||| ||||||||||| | || |||| || ||||| |||||| | || ||||||||| |||| |||||||||| |
|
|
| T |
4557682 |
gttgtttatgtgaattttgggagcatgacagttatgacggcagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtgga |
4557583 |
T |
|
| Q |
124 |
tcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtccaca |
223 |
Q |
| |
|
||| |||||| ||||||||||| || |||||||| |||||||||| || |||| |||||||||||||||||||||||||| || | ||||| || || |
|
|
| T |
4557582 |
tcattaggcccgatcttgtcatcggtggctcagttgttttgtcatcggagtttgtcaatgaaatttcagatagaggcctaatcgcgggctggtgcccgca |
4557483 |
T |
|
| Q |
224 |
agagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttgtgt |
323 |
Q |
| |
|
|||| ||||||| ||||| || ||| | |||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
4557482 |
agagcaagtattaaaccatccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatctgctggagttccaatgttgtgt |
4557383 |
T |
|
| Q |
324 |
tggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggaggtgg |
423 |
Q |
| |
|
|||||||||||||||||||||||| || |||| |||| |||||| ||| |||| ||||||| |||||||| || || |||||||||||||| ||||| | |
|
|
| T |
4557382 |
tggccattttttgctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtag |
4557283 |
T |
|
| Q |
424 |
tgaagctgatcaatgaattgatagacggagatgaaggaaagaa |
466 |
Q |
| |
|
||| || ||||||||||||| || || || |||||||||| |
|
|
| T |
4557282 |
agaatttggtcaatgaattgatggagggggagaaaggaaagaa |
4557240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 19 - 472
Target Start/End: Original strand, 4489925 - 4490378
Alignment:
| Q |
19 |
gatctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccattttt |
118 |
Q |
| |
|
|||||||||||||||| ||||| || ||||| || |||||| ||| ||| | || || ||||| |||||| |||| || ||||||||||| ||||| |
|
|
| T |
4489925 |
gatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctattagagtttgcatggggtttggccaacagcaagaaacccttttt |
4490024 |
T |
|
| Q |
119 |
gtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgt |
218 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| |||||| | | ||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4490025 |
gtggatcattaggcctgatcttgttattggtggctcacaggtgttgtcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgt |
4490124 |
T |
|
| Q |
219 |
ccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgt |
318 |
Q |
| |
|
||||||||||| |||||||| ||||| ||| | |||||||||||||||||||| |||||||| |||| || || || |||||||||||||||||||||| |
|
|
| T |
4490125 |
ccacaagagaaggtattgaatcacccttcaattggtggattcttgactcattgtggatggaactcaatcatggagagtatatgtgctggagtgccaatgt |
4490224 |
T |
|
| Q |
319 |
tgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagagga |
418 |
Q |
| |
|
||||||||||||||||||||||||| ||| | ||||| ||||||| | |||||| ||||||| ||| |||| ||||| ||||| |||||||| || |
|
|
| T |
4490225 |
tgtgttggccattttttgctgatcaaccacttagcagtagaattatttgcgaagaatgggagattgggatgaaaattgataccaatgtaaagagagaaga |
4490324 |
T |
|
| Q |
419 |
ggtggtgaagctgatcaatgaattgatagacggagatgaaggaaagaatatgag |
472 |
Q |
| |
|
||| | ||| ||||||||||||||||| | ||||| |||||||||| ||||| |
|
|
| T |
4490325 |
ggtagagaaactgatcaatgaattgatggtgggagagaaaggaaagaagatgag |
4490378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 24 - 472
Target Start/End: Complemental strand, 4571529 - 4571081
Alignment:
| Q |
24 |
gttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgtgga |
123 |
Q |
| |
|
||||||||||||||||| || |||| |||||||||||| | || |||| || ||||| |||||| | || ||||||||| ||| |||||||||| |
|
|
| T |
4571529 |
gttgtttatgtgaattttgggagcaggacagttatgacttcagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaactctttttgtgga |
4571430 |
T |
|
| Q |
124 |
tcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtccaca |
223 |
Q |
| |
|
||| |||||| |||||||||||||| |||||||| |||||||||| || |||| ||||||||||||||||||||||||||| || ||||||| | || |
|
|
| T |
4571429 |
tcattaggcccgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaattgctggttggtgctcgca |
4571330 |
T |
|
| Q |
224 |
agagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttgtgt |
323 |
Q |
| |
|
|||||||||||||||||| || ||| | ||||| ||||||||||| || |||||||| ||||| || |||||||||| | ||||||| |||||||||||| |
|
|
| T |
4571329 |
agagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactcaacgaccgaaagcatatctactggagttccaatgttgtgt |
4571230 |
T |
|
| Q |
324 |
tggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggaggtgg |
423 |
Q |
| |
|
| |||||||||||||||||||||| || ||||||||| ||| || ||| |||| ||||||| || ||||||||||| |||||||||||| | ||||||| |
|
|
| T |
4571229 |
tagccattttttgctgatcagccagcaaactgtagatatatctgcaatacatgggagattggaatcgaaatcgatactaatgtgaagagaaatgaggtgg |
4571130 |
T |
|
| Q |
424 |
tgaagctgatcaatgaattgatagacggagatgaaggaaagaatatgag |
472 |
Q |
| |
|
||| || ||||||||||||| | |||||| |||||||||| ||||| |
|
|
| T |
4571129 |
agaatttggtcaatgaattgatggtgggagataaaggaaagaagatgag |
4571081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 19 - 347
Target Start/End: Original strand, 4503967 - 4504295
Alignment:
| Q |
19 |
gatctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccattttt |
118 |
Q |
| |
|
|||||||||||||||| ||||| || ||||||||||||||| || || || | || |||||||||||| |||| |||||||||||||| ||||| |
|
|
| T |
4503967 |
gatctgttgtttatgtaaattttggcagcattacagttatgtcttaagataaattgttagagtttgcttggggtttggccaatagcaagaaacctttttt |
4504066 |
T |
|
| Q |
119 |
gtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgt |
218 |
Q |
| |
|
|||||| | ||||||||||||||| ||||| ||||||| | | ||||||||||| |||| |||||||| ||| ||||||| || |||||||||||||| |
|
|
| T |
4504067 |
gtggattattaggcctgatcttgttattggtggctcagaggtgttgtcatctgattttgtgaatgaaacttctaatagaggacttgtagcaagttggtgt |
4504166 |
T |
|
| Q |
219 |
ccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgt |
318 |
Q |
| |
|
|||||||| ||||| ||||||||||| ||| |||| ||||||||||||||||| |||||||| |||||||||||||| | ||||||||||||||||||| |
|
|
| T |
4504167 |
ccacaagataaagtgttgaaccacccttcaatcggaggattcttgactcattgtggatggaactcaaccactgaaagtgtttgtgctggagtgccaatgt |
4504266 |
T |
|
| Q |
319 |
tgtgttggccattttttgctgatcagcca |
347 |
Q |
| |
|
||||||||||||||||| ||||||||||| |
|
|
| T |
4504267 |
tgtgttggccatttttttctgatcagcca |
4504295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 102 - 442
Target Start/End: Complemental strand, 4568535 - 4568195
Alignment:
| Q |
102 |
agcaagaaaccatttttgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcc |
201 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||| | ||||||||||| |||||||| ||||||||||| || |||| ||||| || ||| |||||||||| |
|
|
| T |
4568535 |
agcaagaaaccttttttgtggatcattaggccttagcttgtcattggtggctcagttattttgtcatccgagtttgtgaatggaacttcggatagaggcc |
4568436 |
T |
|
| Q |
202 |
taatagcaagttggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatg |
301 |
Q |
| |
|
||||||||| |||||||| |||||| |||| ||||||||||| ||||| || |||||||||||||||| |||||||| || || |||||||| || |
|
|
| T |
4568435 |
aaatagcaagctggtgtccgcaagagcaagtgttgaaccacccttcagttggacgattcttgactcattgtggatggaactccacattggaaagcatttg |
4568336 |
T |
|
| Q |
302 |
tgctggagtgccaatgttgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgataca |
401 |
Q |
| |
|
||| |||| |||||||| |||||||| |||||| |||| ||||||||| |||| |||| |||||||||| | | | |||| || || ||||| |||||| |
|
|
| T |
4568335 |
tgccagagtaccaatgttatgttggccttttttttctgagcagccaacatactgcagatatatttgtaataagttggagatcggaatcgaaattgataca |
4568236 |
T |
|
| Q |
402 |
aatgtgaagagagaggaggtggtgaagctgatcaatgaatt |
442 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
4568235 |
aatgtgaagagagaggaggtggagaagctgatgaatgaatt |
4568195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 10 - 301
Target Start/End: Original strand, 4299382 - 4299673
Alignment:
| Q |
10 |
aggagcagagatctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaa |
109 |
Q |
| |
|
|||||| | |||| ||||||||||||||||| || ||| |||||||||||||||| |||||||| || ||||||||||| |||| ||| ||| ||| |
|
|
| T |
4299382 |
aggagccgggatcggttgtttatgtgaattttggcagcgttacagttatgactccagagcaactgttagagattgcttggggtttggccaattgcaggaa |
4299481 |
T |
|
| Q |
110 |
accatttttgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagca |
209 |
Q |
| |
|
||||||||||||||||| |||||| || |||||||||||||||| | |||||||||||||| |||| ||||||||||||| |||||||||||| ||| |
|
|
| T |
4299482 |
accatttttgtggatcattaggccagaccttgtcattggcggcttgtttattttgtcatctgagtttgagaatgaaatttcaaatagaggcctaaccgca |
4299581 |
T |
|
| Q |
210 |
agttggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatg |
301 |
Q |
| |
|
|| | |||||||||||| ||||| |||||||||| ||| | ||||||||||||||||| || |||||||| ||||||| |||||||||||| |
|
|
| T |
4299582 |
agctagtgtccacaagaacaagtactgaaccacccttcaattggtggattcttgactcactgtggatggaactcaaccattgaaagcatatg |
4299673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 190 - 399
Target Start/End: Complemental strand, 4493346 - 4493137
Alignment:
| Q |
190 |
cagatagaggcctaatagcaagttggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccac |
289 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||||||||| | ||||||||| || | |||||||||||||||||||| |||||||| ||||| || |
|
|
| T |
4493346 |
cagatagaggcctaattgctagttggtgtccacaagagaaactgctgaaccaccattcgattggtggattcttgactcattgtggatggaactcaactac |
4493247 |
T |
|
| Q |
290 |
tgaaagcatatgtgctggagtgccaatgttgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatg |
389 |
Q |
| |
|
||| ||||||||| ||||||||||||||||||||||| || ||| ||||||||||||| |||||||||| ||||| ||||||| | ||||||| | |
|
|
| T |
4493246 |
caaaaacatatgtgccggagtgccaatgttgtgttggcctttctttagtgatcagccaacaaactgtagattgatttgcaatgaattggagattggagta |
4493147 |
T |
|
| Q |
390 |
gaaatcgata |
399 |
Q |
| |
|
|||||||||| |
|
|
| T |
4493146 |
gaaatcgata |
4493137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 374 - 445
Target Start/End: Original strand, 4299671 - 4299742
Alignment:
| Q |
374 |
atggaagattggtatggaaatcgatacaaatgtgaagagagaggaggtggtgaagctgatcaatgaattgat |
445 |
Q |
| |
|
|||| ||||||| || ||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
4299671 |
atgggagattggaatcgaaatcgatacaaatgtgaggagagaggaggtggaaaagctgatcaatgaattgat |
4299742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 120 - 318
Target Start/End: Original strand, 4391794 - 4391996
Alignment:
| Q |
120 |
tggatcactaggcctgatcttgtcattggcggctca-gtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaa----tagcaagttg |
214 |
Q |
| |
|
||||||| ||||| ||| |||||||||||| | ||| ||| |||||| || ||| | || ||||||||||||||||||||| ||| | ||||| || |
|
|
| T |
4391794 |
tggatcattaggcttgaccttgtcattggcaggtcatgtg-ttttgttatatgagtatgagaatgaaatttcagatagaggtctatctagtcgcaagatg |
4391892 |
T |
|
| Q |
215 |
gtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgcca |
314 |
Q |
| |
|
|||||| ||||| |||||||||||||||| | | | |||||||||| || ||||| ||||| || ||| ||| ||||||||| ||| || |||| ||| |
|
|
| T |
4391893 |
gtgtccgaaagagcaagtattgaaccacccttgaatttgtggattcttaacgcattgtggatgaaactcacccattgaaagcatttgttctagagttcca |
4391992 |
T |
|
| Q |
315 |
atgt |
318 |
Q |
| |
|
|||| |
|
|
| T |
4391993 |
atgt |
4391996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 19 - 445
Target Start/End: Complemental strand, 1674788 - 1674362
Alignment:
| Q |
19 |
gatctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccattttt |
118 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||| ||||||||||| || ||||| ||| |||||||||||| |||| || |||||||||| ||||| |
|
|
| T |
1674788 |
gatcggttgtttatgtgaatttcggtagcattattgttatgactccagatcaactattggagtttgcttggggtttggccgattgcaagaaacctttttt |
1674689 |
T |
|
| Q |
119 |
gtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgt |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||| ||| |||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
1674688 |
gtggatcactaggcctgatcttgtcattggtggctcagtggttttgtcatctgagtttatgaaagaaatttcagatagaggcctaatatcaaattggtgt |
1674589 |
T |
|
| Q |
219 |
ccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgt |
318 |
Q |
| |
|
|||||||||||||| ||||||||||| ||| |||| ||||||||||| || ||||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
1674588 |
ccacaagagaaagtgttgaaccacccttcaatcggcggattcttgacacactgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgt |
1674489 |
T |
|
| Q |
319 |
tgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagagga |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
1674488 |
tgtgttggccattttttgctgatcagccaacaaactgtagatttatttgtaatgaatggaagattggtatggaaattgatacgaatgtgaagagagaggg |
1674389 |
T |
|
| Q |
419 |
ggtggtgaagctgatcaatgaattgat |
445 |
Q |
| |
|
||| |||||| |||||||||||||| |
|
|
| T |
1674388 |
tttggagaagcttatcaatgaattgat |
1674362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 81 - 445
Target Start/End: Original strand, 20863475 - 20863839
Alignment:
| Q |
81 |
tttgcttggggtctggctaatagcaagaaaccatttttgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcga |
180 |
Q |
| |
|
||||| |||||| |||| || ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||| ||||||| |||| || |
|
|
| T |
20863475 |
tttgcatggggtttggccaacagcaagaaaccctttttgtggatcattaggcctgatcttgtcattggtggctcggtgattttttcatctgcgtttgtga |
20863574 |
T |
|
| Q |
181 |
atgaaatttcagatagaggcctaatagcaagttggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaa |
280 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||||||||||||||| || |||||||| || ||| | |||||||| | |||||||| |||||||| |
|
|
| T |
20863575 |
atgaaatttcagatagaggcctaatcgcgagttggtgtccacaagagaaggtgttgaaccatccttcaattggtggatttctaactcattgtggatggaa |
20863674 |
T |
|
| Q |
281 |
ttcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaag |
380 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| |||| ||||| || ||||| || |
|
|
| T |
20863675 |
ctcaaccattgagagcatatgtgctggagtgccaatgttgtgctggccattttttgctgatcagccgacaaactgcagatacatttgcaacaaatgggag |
20863774 |
T |
|
| Q |
381 |
attggtatggaaatcgatacaaatgtgaagagagaggaggtggtgaagctgatcaatgaattgat |
445 |
Q |
| |
|
||||| || ||||| || || ||||| |||||||||||||||| || |||| | ||||||||||| |
|
|
| T |
20863775 |
attgggatcgaaattgacaccaatgtcaagagagaggaggtggagatgctggtaaatgaattgat |
20863839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 24 - 472
Target Start/End: Original strand, 16685842 - 16686290
Alignment:
| Q |
24 |
gttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgtgga |
123 |
Q |
| |
|
||||||||||||||||| || ||||| |||||||||||| | || |||| || |||||||||||| || | ||||||||| ||| ||| |||| |
|
|
| T |
16685842 |
gttgtttatgtgaattttgggagcatgacagttatgactgcagaaaaactattagagtttgcttggggtttgaccaatagcaagcaacattttcaatgga |
16685941 |
T |
|
| Q |
124 |
tcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtccaca |
223 |
Q |
| |
|
||| |||| |||||||||||||| |||| || ||| ||||||||||||| ||| ||||||||| ||||||||| ||||||| || || ||||| || || |
|
|
| T |
16685942 |
tcattaggtctgatcttgtcatttgcggttccgtggttttgtcatctgagtttaagaatgaaatctcagatagaagcctaatcgcgagctggtgcccgca |
16686041 |
T |
|
| Q |
224 |
agagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttgtgt |
323 |
Q |
| |
|
|||| ||||||| ||||| || ||| ||||||||||||| |||||||| |||||||| |||||||||||||| |||| ||||||||| |||||||||||| |
|
|
| T |
16686042 |
agagcaagtattaaaccatccttcaatcggtggattcttaactcattgtggatggaactcaaccactgaaagtatatatgctggagttccaatgttgtgt |
16686141 |
T |
|
| Q |
324 |
tggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggaggtgg |
423 |
Q |
| |
|
|||||||||||||||||||||||| || | || |||| |||||| ||||||||| ||||||| |||||||| || || |||||||||||||| ||||||| |
|
|
| T |
16686142 |
tggccattttttgctgatcagccagcaaaatgcagatatatttgcaatgaatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtgg |
16686241 |
T |
|
| Q |
424 |
tgaagctgatcaatgaattgatagacggagatgaaggaaagaatatgag |
472 |
Q |
| |
|
||| || ||||||||||||| | ||||| |||||||||| ||||| |
|
|
| T |
16686242 |
agaaattggtcaatgaattgatggtgggagagaaaggaaagaagatgag |
16686290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 228; Significance: 1e-125; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 21 - 444
Target Start/End: Original strand, 3291 - 3714
Alignment:
| Q |
21 |
tctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgt |
120 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| | ||||| ||||||||||||||| |||| ||||||||||||| ||||||| |
|
|
| T |
3291 |
tctgttgtttatgtgaatttcggcagcattacagttatgactccaaatcaactgttagaatttgcttggggtttggccgatagcaagaaaccgtttttgt |
3390 |
T |
|
| Q |
121 |
ggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtcc |
220 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| | ||||||||||| || |||| ||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
3391 |
ggatcattaggcctgatcttgtcattggcggctcgtttattttgtcatcagaatttgagaatgaaatttcagatagaggcctaatcacaagctggtgtcc |
3490 |
T |
|
| Q |
221 |
acaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttg |
320 |
Q |
| |
|
||||||| ||||| ||| |||||| ||| | |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| | |
|
|
| T |
3491 |
acaagagcaagtactgatccacccttcaattggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgcgctggagtaccaatgctt |
3590 |
T |
|
| Q |
321 |
tgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggagg |
420 |
Q |
| |
|
||||||||||| |||| ||||||||||||| |||||||||||||||| || |||||| ||||||| | |||||||||| ||||||||||||| |||| |
|
|
| T |
3591 |
tgttggccattctttggtgatcagccaacaaactgtagatttatttgcaacgaatgggagattggacttgaaatcgatatggatgtgaagagagatgagg |
3690 |
T |
|
| Q |
421 |
tggtgaagctgatcaatgaattga |
444 |
Q |
| |
|
||| |||||| |||||||||||| |
|
|
| T |
3691 |
tggagaagctagtcaatgaattga |
3714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 223; Significance: 1e-122; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 103 - 445
Target Start/End: Original strand, 27999753 - 28000095
Alignment:
| Q |
103 |
gcaagaaaccatttttgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcct |
202 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||| ||| |||||||||||||||||||| |
|
|
| T |
27999753 |
gcaagaaaccttttttgtggatcactaggcctaatcttgtcattggtggctcagtggttttgtcatctgagtttaggaaagaaatttcagatagaggcct |
27999852 |
T |
|
| Q |
203 |
aatagcaagttggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgt |
302 |
Q |
| |
|
|||| ||| ||||||||||||||||||||| ||||||||||| ||| || | || ||||||||||| ||||||||||| |||||||| ||||||||||| |
|
|
| T |
27999853 |
aatatcaaattggtgtccacaagagaaagttttgaaccacccttcaatcagcgggttcttgactcactgcggatggaactcaaccaccgaaagcatatgc |
27999952 |
T |
|
| Q |
303 |
gctggagtgccaatgttgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaa |
402 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| | |
|
|
| T |
27999953 |
gctggagtgccaatgttgtgttggtcattttttgctgatcagccaacaaactgtagatttatttgtaatgaatggaagattggtatggaaattgatatga |
28000052 |
T |
|
| Q |
403 |
atgtgaagagagaggaggtggtgaagctgatcaatgaattgat |
445 |
Q |
| |
|
||||||||| |||||| ||| |||||| |||||||||||||| |
|
|
| T |
28000053 |
atgtgaagatagaggatttggagaagcttatcaatgaattgat |
28000095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 81 - 445
Target Start/End: Complemental strand, 24103499 - 24103135
Alignment:
| Q |
81 |
tttgcttggggtctggctaatagcaagaaaccatttttgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcga |
180 |
Q |
| |
|
|||||||||||| |||| ||||||||||| || ||||||||||| | ||||||||||||||||||||| |||||||| ||||||||||||| ||| | |
|
|
| T |
24103499 |
tttgcttggggtttggccaatagcaagaacccttttttgtggataattaggcctgatcttgtcattgggggctcagttgttttgtcatctgattttttta |
24103400 |
T |
|
| Q |
181 |
atgaaatttcagatagaggcctaatagcaagttggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaa |
280 |
Q |
| |
|
| ||| ||||||||||||| |||||||||||||||||||||||||| ||||| || |||||||| || | ||||||||||||||||||||||||||||| |
|
|
| T |
24103399 |
aagaagtttcagatagaggactaatagcaagttggtgtccacaagataaagtgttaaaccacccttcgattggtggattcttgactcattgcggatggaa |
24103300 |
T |
|
| Q |
281 |
ttcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaag |
380 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||| |||||||||||||||| |||||||| || |
|
|
| T |
24103299 |
ctcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattctttggtgatcaaccaacaaactgtagatttatttgctatgaatgggag |
24103200 |
T |
|
| Q |
381 |
attggtatggaaatcgatacaaatgtgaagagagaggaggtggtgaagctgatcaatgaattgat |
445 |
Q |
| |
|
||||| | |||||||||||||||||||||||||| || || | |||| | ||||||||||||| |
|
|
| T |
24103199 |
attggactcgaaatcgatacaaatgtgaagagagatgacgtcgagaagttagtcaatgaattgat |
24103135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 21 - 472
Target Start/End: Complemental strand, 3086980 - 3086529
Alignment:
| Q |
21 |
tctgttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgt |
120 |
Q |
| |
|
|||||||||||||||| ||| || ||||||||||||||||||| |||||||| || |||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
3086980 |
tctgttgtttatgtgagttttggcagcattacagttatgactcaagagcaactattagagtttgcttggggtttggccaatagcaagaaaccatttttgt |
3086881 |
T |
|
| Q |
121 |
ggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtcc |
220 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| | ||| |||||||||| |||| ||| ||||||||||||||||| ||||| ||||| |||||||| |
|
|
| T |
3086880 |
ggatcattaggcctgatcttgtcattggcggctcctttattatgtcatctgagtttgagaaagaaatttcagatagaggtctaatcgcaagctggtgtcc |
3086781 |
T |
|
| Q |
221 |
acaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttg |
320 |
Q |
| |
|
|||||| |||||||||| ||||| ||| | |||||||||||||||||||| |||||||| ||||| ||||||| || ||||||||||||||||||| |
|
|
| T |
3086780 |
gcaagagcaagtattgaatcacccttcaattggtggattcttgactcattgtggatggaactcaacggttgaaagcgtacttgctggagtgccaatgttg |
3086681 |
T |
|
| Q |
321 |
tgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggagg |
420 |
Q |
| |
|
||||||||||||| || ||||| |||| | ||||||||| ||| || ||| |||| ||||||| || ||||||||||| ||||||||||||||||||| |
|
|
| T |
3086680 |
tgttggccattttatggagatcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggagg |
3086581 |
T |
|
| Q |
421 |
tggtgaagctgatcaatgaattgatagacggagatgaaggaaagaatatgag |
472 |
Q |
| |
|
| | ||||||||||||||||||||| | |||||| |||||||||| ||||| |
|
|
| T |
3086580 |
tcgagaagctgatcaatgaattgatggtgggagataaaggaaagaagatgag |
3086529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 24 - 445
Target Start/End: Original strand, 4261 - 4682
Alignment:
| Q |
24 |
gttgtttatgtgaatttcggaagcattacagttatgactccggagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgtgga |
123 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| || ||||| || |||||||||| | || | ||| | |||||| | |||||||||| |
|
|
| T |
4261 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttgggttttgaccaattgtaagaaatcctttttgtgga |
4360 |
T |
|
| Q |
124 |
tcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtccaca |
223 |
Q |
| |
|
||| ||||||||| ||||||||||||||||| | |||||||||||||| |||| ||||||||||||||||||||||||||| || || ||||||||||| |
|
|
| T |
4361 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccaca |
4460 |
T |
|
| Q |
224 |
agagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatgttgtgt |
323 |
Q |
| |
|
|||| ||||| |||||||||| ||| | ||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
4461 |
agagcaagtactgaaccacccttcaattggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgtaggagtgccaatgttgtgt |
4560 |
T |
|
| Q |
324 |
tggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggaggtgg |
423 |
Q |
| |
|
||||||||||| || |||||||||||| ||| | | | ||| | || |||| ||| |||||||||||| ||||| ||||||||||||||| |||| |
|
|
| T |
4561 |
tggccatttttcgccgatcagccaacaaactatcggtatatctcccatatatgggagactggtatggaaattgatactaatgtgaagagagagaaggtaa |
4660 |
T |
|
| Q |
424 |
tgaagctgatcaatgaattgat |
445 |
Q |
| |
|
||| |||||||||||||||| |
|
|
| T |
4661 |
cgaatatgatcaatgaattgat |
4682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 192 - 423
Target Start/End: Original strand, 3428 - 3658
Alignment:
| Q |
192 |
gatagaggcctaatagcaagttggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaattcaaccactg |
291 |
Q |
| |
|
|||| ||||||| | ||||| |||||||| ||||| |||| ||||||||||| | ||| ||||||||||| |||||||| |||||||| ||||||| || |
|
|
| T |
3428 |
gatataggcctagtcgcaagatggtgtccgtaagagcaagtgttgaaccaccctt-agttggtggattcttaactcattgtggatggaactcaaccattg |
3526 |
T |
|
| Q |
292 |
aaagcatatgtgctggagtgccaatgttgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatgga |
391 |
Q |
| |
|
||||||| ||| ||||||| |||||| || ||||||||||||| | || || ||||| ||||||||| ||||| ||||||||| ||||||| | || |
|
|
| T |
3527 |
aaagcatttgttctggagttccaatgctgcgttggccatttttccccgaacactcaacaaactgtagatgcatttggaatgaatgggagattggaagtga |
3626 |
T |
|
| Q |
392 |
aatcgatacaaatgtgaagagagaggaggtgg |
423 |
Q |
| |
|
||| ||| | |||||||||||||||||||||| |
|
|
| T |
3627 |
aatagattccaatgtgaagagagaggaggtgg |
3658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 3162 - 3261
Alignment:
| Q |
102 |
agcaagaaaccatttttgtggatcactaggcctgatcttgtcattggcggctca-gtgattttgtcatctgactttgcgaatgaaatttcagatagaggc |
200 |
Q |
| |
|
||||||||||| ||| ||||||||| |||| |||| |||||||||||||| ||| ||| ||||| || ||| |||| |||||||| ||||||||||||| |
|
|
| T |
3162 |
agcaagaaaccctttgtgtggatcattaggtctgaccttgtcattggcggatcatgtg-ctttgttatatgagtttgagaatgaaacttcagatagaggc |
3260 |
T |
|
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