View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15932_low_4 (Length: 639)

Name: NF15932_low_4
Description: NF15932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15932_low_4
NF15932_low_4
[»] chr6 (18 HSPs)
chr6 (19-636)||(15574893-15575513)
chr6 (23-308)||(15998483-15998767)
chr6 (71-375)||(17860239-17860543)
chr6 (24-149)||(13759467-13759593)
chr6 (39-161)||(16527878-16528001)
chr6 (20-301)||(30355296-30355567)
chr6 (138-302)||(24507306-24507469)
chr6 (28-259)||(12972291-12972522)
chr6 (233-300)||(26499712-26499779)
chr6 (28-147)||(26512795-26512915)
chr6 (28-147)||(26517911-26518031)
chr6 (41-171)||(9943143-9943274)
chr6 (27-223)||(32930416-32930611)
chr6 (233-290)||(33638268-33638325)
chr6 (233-289)||(33638381-33638437)
chr6 (28-123)||(16387290-16387386)
chr6 (28-90)||(14924492-14924555)
chr6 (33-161)||(22262332-22262461)
[»] chr7 (49 HSPs)
chr7 (20-376)||(22067593-22067952)
chr7 (20-398)||(21471766-21472142)
chr7 (20-386)||(7815292-7815658)
chr7 (28-335)||(29544496-29544804)
chr7 (23-308)||(315157-315430)
chr7 (28-335)||(7142075-7142382)
chr7 (29-304)||(23124878-23125154)
chr7 (41-352)||(20470623-20470935)
chr7 (90-308)||(10292794-10293010)
chr7 (153-301)||(20446306-20446452)
chr7 (87-335)||(9801705-9801952)
chr7 (168-308)||(2630334-2630474)
chr7 (39-223)||(1255156-1255340)
chr7 (87-223)||(9761358-9761493)
chr7 (60-302)||(1074461-1074704)
chr7 (168-332)||(7494813-7494977)
chr7 (79-302)||(8308899-8309116)
chr7 (21-161)||(2632440-2632581)
chr7 (204-345)||(21545647-21545789)
chr7 (241-308)||(20017143-20017210)
chr7 (71-167)||(21545797-21545894)
chr7 (111-302)||(24596867-24597057)
chr7 (179-317)||(7777889-7778026)
chr7 (24-108)||(20446212-20446297)
chr7 (167-308)||(9070504-9070645)
chr7 (510-636)||(21472211-21472348)
chr7 (481-547)||(22067446-22067512)
chr7 (231-378)||(7493493-7493640)
chr7 (79-223)||(7372510-7372652)
chr7 (38-147)||(9066119-9066227)
chr7 (28-302)||(18496542-18496816)
chr7 (487-546)||(20446622-20446681)
chr7 (27-223)||(3268909-3269104)
chr7 (241-323)||(10670417-10670499)
chr7 (249-302)||(4828986-4829039)
chr7 (28-148)||(46054675-46054796)
chr7 (93-287)||(5312664-5312857)
chr7 (66-223)||(9755815-9755965)
chr7 (66-131)||(9800611-9800677)
chr7 (33-148)||(17881515-17881631)
chr7 (37-223)||(20461591-20461776)
chr7 (93-161)||(37144963-37145031)
chr7 (20-50)||(4092641-4092671)
chr7 (28-161)||(2353249-2353378)
chr7 (79-151)||(4828820-4828892)
chr7 (181-221)||(4977765-4977805)
chr7 (28-123)||(7956158-7956254)
chr7 (233-273)||(12358655-12358695)
chr7 (75-171)||(12358755-12358851)
[»] chr1 (42 HSPs)
chr1 (20-383)||(30781729-30782092)
chr1 (20-308)||(12423772-12424060)
chr1 (28-253)||(8247570-8247795)
chr1 (28-377)||(26657453-26657802)
chr1 (30-304)||(11769855-11770130)
chr1 (20-308)||(30675453-30675741)
chr1 (28-290)||(25730446-25730709)
chr1 (28-308)||(50047158-50047432)
chr1 (28-308)||(23223388-23223671)
chr1 (28-324)||(23519610-23519893)
chr1 (28-308)||(18300860-18301143)
chr1 (47-297)||(25494357-25494598)
chr1 (91-286)||(25727788-25727983)
chr1 (91-286)||(25736196-25736391)
chr1 (28-300)||(26102034-26102306)
chr1 (71-302)||(19257669-19257898)
chr1 (20-161)||(21451820-21451961)
chr1 (28-276)||(31313529-31313777)
chr1 (28-146)||(12810299-12810418)
chr1 (28-223)||(34381685-34381882)
chr1 (80-302)||(26854183-26854402)
chr1 (477-547)||(21451625-21451695)
chr1 (26-104)||(24903356-24903435)
chr1 (28-302)||(18391059-18391334)
chr1 (233-307)||(52271103-52271177)
chr1 (28-227)||(18795158-18795356)
chr1 (247-308)||(9328363-9328424)
chr1 (262-302)||(23505967-23506007)
chr1 (237-301)||(25373932-25373996)
chr1 (28-302)||(15298734-15299007)
chr1 (28-170)||(25266340-25266482)
chr1 (28-160)||(27461186-27461319)
chr1 (238-302)||(25126667-25126731)
chr1 (246-329)||(9252446-9252529)
chr1 (246-317)||(23521567-23521638)
chr1 (248-304)||(9353209-9353265)
chr1 (168-220)||(23521675-23521727)
chr1 (482-548)||(23521345-23521411)
chr1 (79-160)||(21548677-21548758)
chr1 (265-302)||(25665633-25665670)
chr1 (482-526)||(12423567-12423611)
chr1 (79-123)||(13807794-13807838)
[»] chr8 (44 HSPs)
chr8 (20-360)||(16054263-16054603)
chr8 (20-345)||(13081755-13082083)
chr8 (28-344)||(16052098-16052415)
chr8 (79-376)||(28902118-28902414)
chr8 (20-209)||(26882377-26882566)
chr8 (20-223)||(29047262-29047462)
chr8 (28-300)||(32239264-32239537)
chr8 (27-324)||(5569981-5570280)
chr8 (28-324)||(28901191-28901478)
chr8 (60-302)||(27097665-27097907)
chr8 (28-151)||(14977120-14977245)
chr8 (79-294)||(14424684-14424898)
chr8 (28-161)||(12956466-12956600)
chr8 (111-335)||(24696642-24696867)
chr8 (85-276)||(28260178-28260369)
chr8 (28-307)||(24120208-24120480)
chr8 (71-308)||(22894389-22894625)
chr8 (79-302)||(30850963-30851185)
chr8 (35-208)||(31436463-31436635)
chr8 (196-335)||(11310087-11310225)
chr8 (79-302)||(28291964-28292185)
chr8 (79-220)||(35135367-35135508)
chr8 (93-302)||(11437462-11437671)
chr8 (111-302)||(29291831-29292021)
chr8 (27-302)||(5153734-5154009)
chr8 (27-302)||(30543739-30544013)
chr8 (28-221)||(10866965-10867157)
chr8 (79-222)||(24584669-24584810)
chr8 (71-299)||(6888059-6888284)
chr8 (31-146)||(11310223-11310339)
chr8 (181-287)||(13583398-13583505)
chr8 (487-547)||(13081602-13081662)
chr8 (168-285)||(28859119-28859237)
chr8 (480-547)||(26882669-26882736)
chr8 (93-223)||(28074557-28074684)
chr8 (30-123)||(13530147-13530241)
chr8 (30-123)||(13619686-13619780)
chr8 (487-547)||(29046946-29047007)
chr8 (28-119)||(6358675-6358767)
chr8 (510-549)||(24120692-24120731)
chr8 (482-547)||(28902523-28902588)
chr8 (235-302)||(12956665-12956733)
chr8 (183-223)||(14977052-14977092)
chr8 (262-302)||(31436681-31436720)
[»] chr3 (35 HSPs)
chr3 (21-334)||(25883073-25883386)
chr3 (20-317)||(1475128-1475426)
chr3 (20-301)||(12573259-12573540)
chr3 (20-301)||(13549723-13550004)
chr3 (27-302)||(19219074-19219350)
chr3 (27-307)||(21017853-21018133)
chr3 (28-335)||(10341773-10342071)
chr3 (32-302)||(8402414-8402684)
chr3 (24-249)||(11521113-11521337)
chr3 (28-223)||(33914510-33914700)
chr3 (79-335)||(27415200-27415451)
chr3 (236-355)||(11521350-11521469)
chr3 (51-334)||(2729454-2729733)
chr3 (79-287)||(11474875-11475083)
chr3 (168-345)||(18065913-18066091)
chr3 (39-302)||(18474159-18474421)
chr3 (28-192)||(13911242-13911406)
chr3 (29-292)||(25919345-25919601)
chr3 (28-302)||(21828996-21829270)
chr3 (179-345)||(16970589-16970755)
chr3 (247-302)||(19542987-19543042)
chr3 (481-587)||(11521584-11521696)
chr3 (168-300)||(19263769-19263905)
chr3 (33-227)||(26387784-26387977)
chr3 (80-298)||(30493132-30493349)
chr3 (27-148)||(4775724-4775846)
chr3 (78-220)||(28422481-28422621)
chr3 (71-148)||(12409478-12409556)
chr3 (71-168)||(23007062-23007160)
chr3 (233-302)||(5632406-5632474)
chr3 (27-79)||(25188734-25188786)
chr3 (101-223)||(26797192-26797311)
chr3 (71-116)||(18065836-18065882)
chr3 (79-148)||(26297778-26297847)
chr3 (66-141)||(19263922-19263998)
[»] chr2 (40 HSPs)
chr2 (27-308)||(16593608-16593891)
chr2 (30-393)||(30998750-30999113)
chr2 (20-305)||(25474006-25474291)
chr2 (20-397)||(35707772-35708149)
chr2 (20-446)||(1733070-1733487)
chr2 (27-304)||(21505000-21505278)
chr2 (20-289)||(19949433-19949700)
chr2 (127-345)||(27417083-27417301)
chr2 (50-224)||(35031701-35031875)
chr2 (28-301)||(18236167-18236440)
chr2 (28-203)||(28278386-28278561)
chr2 (29-162)||(21843005-21843139)
chr2 (79-302)||(18818726-18818953)
chr2 (28-306)||(19541014-19541291)
chr2 (29-162)||(21844632-21844766)
chr2 (480-547)||(16593418-16593485)
chr2 (27-295)||(31261975-31262241)
chr2 (480-553)||(1733508-1733581)
chr2 (79-223)||(39730476-39730618)
chr2 (28-151)||(24047359-24047483)
chr2 (480-547)||(35708183-35708249)
chr2 (53-222)||(15829136-15829292)
chr2 (480-639)||(21871720-21871885)
chr2 (181-302)||(1732680-1732802)
chr2 (60-276)||(17152162-17152379)
chr2 (479-547)||(19949154-19949222)
chr2 (79-299)||(24187995-24188217)
chr2 (232-300)||(31274137-31274205)
chr2 (241-300)||(22525685-22525744)
chr2 (79-302)||(34063704-34063931)
chr2 (273-383)||(19949307-19949417)
chr2 (141-301)||(17415028-17415187)
chr2 (28-215)||(32619619-32619793)
chr2 (514-587)||(25474444-25474523)
chr2 (30-223)||(27917926-27918119)
chr2 (233-294)||(14921910-14921971)
chr2 (28-159)||(17240860-17240991)
chr2 (71-223)||(21849017-21849167)
chr2 (28-161)||(32276517-32276651)
chr2 (166-223)||(15454482-15454539)
[»] chr4 (45 HSPs)
chr4 (20-303)||(9782847-9783129)
chr4 (28-345)||(15192180-15192497)
chr4 (28-378)||(27302755-27303104)
chr4 (28-304)||(25315093-25315369)
chr4 (28-335)||(34864126-34864429)
chr4 (87-308)||(10320078-10320297)
chr4 (28-335)||(18897968-18898266)
chr4 (106-308)||(17026554-17026755)
chr4 (205-335)||(51884756-51884886)
chr4 (127-302)||(31859764-31859938)
chr4 (79-302)||(19601827-19602049)
chr4 (90-335)||(47024596-47024831)
chr4 (79-308)||(1695704-1695933)
chr4 (28-169)||(1676291-1676433)
chr4 (28-169)||(1682819-1682961)
chr4 (142-345)||(5676291-5676494)
chr4 (28-335)||(12111158-12111468)
chr4 (181-302)||(13064555-13064677)
chr4 (28-114)||(5906771-5906858)
chr4 (28-302)||(21077210-21077484)
chr4 (28-171)||(22119623-22119767)
chr4 (60-307)||(26159765-26160011)
chr4 (28-276)||(46647173-46647420)
chr4 (480-553)||(27303128-27303201)
chr4 (233-302)||(33519212-33519281)
chr4 (27-109)||(4953658-4953741)
chr4 (251-302)||(23353818-23353869)
chr4 (187-301)||(7024083-7024198)
chr4 (233-300)||(17187355-17187422)
chr4 (27-76)||(5125580-5125629)
chr4 (237-374)||(5906554-5906691)
chr4 (33-161)||(21167711-21167840)
chr4 (79-252)||(18444279-18444451)
chr4 (79-269)||(9288239-9288428)
chr4 (28-161)||(17339817-17339951)
chr4 (480-639)||(25314786-25314951)
chr4 (478-539)||(9782751-9782812)
chr4 (249-297)||(4732954-4733002)
chr4 (492-633)||(51885044-51885191)
chr4 (28-79)||(1696656-1696707)
chr4 (264-302)||(29437674-29437712)
chr4 (233-302)||(22119803-22119871)
chr4 (28-148)||(24925782-24925903)
chr4 (262-294)||(20985264-20985296)
chr4 (118-221)||(29437539-29437640)
[»] chr5 (38 HSPs)
chr5 (28-335)||(22229786-22230088)
chr5 (28-281)||(12339899-12340152)
chr5 (30-308)||(24841732-24842010)
chr5 (28-348)||(17027504-17027824)
chr5 (28-329)||(26329906-26330206)
chr5 (28-308)||(11274187-11274469)
chr5 (20-300)||(16634015-16634296)
chr5 (28-308)||(25594550-25594830)
chr5 (28-308)||(16622534-16622805)
chr5 (20-209)||(15205614-15205801)
chr5 (32-308)||(24517335-24517603)
chr5 (20-305)||(17381901-17382180)
chr5 (38-223)||(18222480-18222665)
chr5 (41-345)||(25680586-25680881)
chr5 (119-270)||(22754963-22755114)
chr5 (28-302)||(26070451-26070725)
chr5 (148-277)||(25075201-25075329)
chr5 (148-277)||(25133170-25133298)
chr5 (38-300)||(7742735-7742997)
chr5 (233-302)||(19763749-19763818)
chr5 (195-300)||(18452677-18452783)
chr5 (195-301)||(30072259-30072366)
chr5 (79-150)||(24268584-24268655)
chr5 (79-150)||(24345213-24345284)
chr5 (66-259)||(24410836-24411029)
chr5 (482-547)||(23125546-23125611)
chr5 (66-216)||(20083480-20083631)
chr5 (60-274)||(20694649-20694863)
chr5 (28-90)||(30072155-30072218)
chr5 (66-151)||(19331526-19331612)
chr5 (28-165)||(23157788-23157926)
chr5 (29-161)||(24846239-24846372)
chr5 (28-123)||(22967884-22967980)
chr5 (251-302)||(18872915-18872966)
chr5 (482-587)||(22755368-22755479)
chr5 (96-170)||(16603608-16603682)
chr5 (246-297)||(22643773-22643824)
chr5 (233-302)||(23157667-23157736)
[»] scaffold0171 (2 HSPs)
scaffold0171 (28-308)||(6173-6452)
scaffold0171 (27-317)||(21373-21664)
[»] scaffold0188 (1 HSPs)
scaffold0188 (28-308)||(26812-27092)
[»] scaffold0386 (2 HSPs)
scaffold0386 (43-223)||(13014-13194)
scaffold0386 (28-345)||(8529-8847)
[»] scaffold0362 (1 HSPs)
scaffold0362 (233-345)||(7801-7913)
[»] scaffold0002 (2 HSPs)
scaffold0002 (136-294)||(447062-447219)
scaffold0002 (20-103)||(446974-447058)
[»] scaffold0011 (1 HSPs)
scaffold0011 (80-302)||(228050-228269)
[»] scaffold0650 (1 HSPs)
scaffold0650 (170-335)||(5600-5765)
[»] scaffold0337 (1 HSPs)
scaffold0337 (138-302)||(1896-2059)
[»] scaffold0065 (1 HSPs)
scaffold0065 (138-302)||(12332-12495)
[»] scaffold0282 (2 HSPs)
scaffold0282 (197-307)||(22472-22582)
scaffold0282 (78-114)||(22596-22632)
[»] scaffold0190 (1 HSPs)
scaffold0190 (28-299)||(11564-11835)
[»] scaffold0103 (1 HSPs)
scaffold0103 (487-636)||(37123-37278)
[»] scaffold1149 (1 HSPs)
scaffold1149 (262-302)||(1998-2038)
[»] scaffold1026 (2 HSPs)
scaffold1026 (93-148)||(1850-1905)
scaffold1026 (262-294)||(1701-1733)
[»] scaffold0185 (1 HSPs)
scaffold0185 (235-302)||(2684-2751)
[»] scaffold0836 (1 HSPs)
scaffold0836 (262-294)||(2819-2851)


Alignment Details
Target: chr6 (Bit Score: 452; Significance: 0; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 19 - 636
Target Start/End: Original strand, 15574893 - 15575513
Alignment:
Q  19 gttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatgtttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  15574893 gttagtactttttctttgcatttgaagacaaataagatgagatttagaggaattgtcaatgtttgaggaacatgttatattgttttcactctagtcgttg 15574992  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 218  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15574993 taatttagttttagcctagatcatgcaactccataggttttttaagtgtttt-gtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 15575091  T
Q  219 atcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagacc 318  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  15575092 atcaacgatgaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagacg 15575191  T
Q  319 gaagaaagatcgaaaactggatgaaaatgtaagaaatcgcacgtgcggggctgcctcaggtgcccctgtgcctgtaccatgcatccctgctcatgagata 418  Q
    ||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15575192 gaagaaagatcgaaaacaggatggaaatgtaagaaatcgcacctgcggggctgcctcaggtgcccctgtgcctgtaccatgcatccctactcatgagata 15575291  T
Q  419 tgattccttgctccctaggcacccatgcaccccaacgtctgtaagaagaagnnnnnnnccacttttttcttgttttccaagctggatcgacggataaagc 518  Q
    | |||||||||||||||||||||||||||| ||| ||||| |||| | ||        ||||||||||||||||||||||||| ||||| |||||||| |    
T  15575292 tcattccttgctccctaggcacccatgcactccagcgtctataagcaaaa--aactaaccacttttttcttgttttccaagctagatcggcggataaaac 15575389  T
Q  519 ccaattttcttctcttaatccctaagtaatctcatt------ataaagacccttgcacactattttatacattcacaaaaatttgacggggaaggtaaac 612  Q
    ||||||||||||||||||||||||||||||||||||      || |||||||||||| ||||||||||||||||| |||| ||||||||||||||||||     
T  15575390 ccaattttcttctcttaatccctaagtaatctcattttataaatgaagacccttgcagactattttatacattcagaaaattttgacggggaaggtaaat 15575489  T
Q  613 gtcaagcatcagagttccaaggca 636  Q
    ||||||||||| ||||| ||||||    
T  15575490 gtcaagcatcaaagttctaaggca 15575513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 23 - 308
Target Start/End: Original strand, 15998483 - 15998767
Alignment:
Q  23 gtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaa 121  Q
    |||| ||||||||||||||||||  |||| | |||||| ||| |||| |  || ||| ||||||||| |||||||||| ||||| ||  | |||||| ||    
T  15998483 gtacgttttctttgcatttgaaggaaaatgatatgagagttagaggagtgttccatggtttgaggaaaatattgtattcttttcccttgattcgttgaaa 15998582  T
Q  122 tttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatc 221  Q
    || ||||||  | || ||||||||||| || ||||||||| |||||||| |||| |||||||||||||||| | ||||||||||||||| ||||| ||||    
T  15998583 ttaagttttctcatatatcatgcaacttcataggtgttttgagtgtttt-gtagtgaggaatcatgtaaatgaccaaatcaagacatcatgtgaatgatc 15998681  T
Q  222 aaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
    || ||| |||||||||||| || ||| ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  15998682 aaggat-aagaattgaagaccatgggctcttagaaggttgttgtagacaatacaaagtgaagcaaattcatttcaagttcctaggag 15998767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 71 - 375
Target Start/End: Complemental strand, 17860543 - 17860239
Alignment:
Q  71 ttgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgttt 169  Q
    ||||||||| |||||||||||| ||||||| ||||||||| |||| |||| ||||| ||||| | || |||||||||||||| | ||| ||| |||||||    
T  17860543 ttgtcaatggtttgaggaacattttgtattattttcactcgagtcattgtcatttacttttatcttaaatcatgcaactccatacgtgctttgagtgttt 17860444  T
Q  170 ttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagac 269  Q
    | |||| ||| |||||||||| | ||||||||| ||||||||||||||||| ||  || |  ||||||||  ||| ||||||||||||||  ||| ||||    
T  17860443 t-gtagtgagaaatcatgtaattcaacaaatcaggacatcacgtgaaggataaagtataagaaattgaaggacaatggttcttagaaggtttttgtagac 17860345  T
Q  270 aatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaagatcgaaaactggatgaaaatgtaagaaatcgcacgtgcggggc 369  Q
    ||||||||||||||||||||||||||||||||||||||| ||  || |  ||||| ||| |||||| || |||||| | ||||||| ||||  | |||||    
T  17860344 aatacaaagtgaagaaaattcatttcaagttcctaggagtttccagtcgaaagaacgattgaaaacagggtgaaaacgcaagaaattgcacaagaggggc 17860245  T
Q  370 tgcctc 375  Q
    ||||||    
T  17860244 tgcctc 17860239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 13759593 - 13759467
Alignment:
Q  24 tactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaat 122  Q
    |||||||| |||| ||||||||| ||||||||||||| ||| |||| ||||||||| |||||||||||||||| ||||||||||||| | ||||||||||    
T  13759593 tactttttatttgtatttgaagataaataagatgagagttagaggagttgtcaatggtttgaggaacatattgaattgttttcactcgaatcgttgtaat 13759494  T
Q  123 ttagttttagcctagatcatgcaactc 149  Q
    | | |||||  ||| ||||||||||||    
T  13759493 tcaattttattctatatcatgcaactc 13759467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 39 - 161
Target Start/End: Original strand, 16527878 - 16528001
Alignment:
Q  39 tttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctag 137  Q
    |||||||||||||||||||||| ||| |||| |||||  || |||||| | |||||| |||||||||||||| ||||||||||||| | ||||| |||||    
T  16527878 tttgaagacaaataagatgagagttagaggagttgtcggtggtttgagtaccatattatattgttttcactcgagtcgttgtaattcatttttatcctag 16527977  T
Q  138 atcatgcaactccacaggtgtttt 161  Q
    ||||||||||| || |||||||||    
T  16527978 atcatgcaacttcataggtgtttt 16528001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 30355296 - 30355567
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    ||||||||||| ||| ||||||||||  ||||||||||||| ||| || | ||||||||| |||||  ||||||||||||| ||||||||| |||||||     
T  30355296 ttagtacttttactt-gcatttgaaggtaaataagatgagagttagagaagttgtcaatggtttgataaacatattgtatt-ttttcactcaagtcgttt 30355393  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 218  Q
    ||||| | ||||| | || |||||||||||  | |||||||||          ||||  |||| ||| ||||||  ||||| |||||| |||| ||||||    
T  30355394 taattcacttttatcataaatcatgcaactttataggtgtttt----------gtagtaaggattcacgtaaatcgacaaaccaagacctcacatgaagg 30355483  T
Q  219 atcaaagatc--aagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttc 301  Q
    ||| | |||   |||| |||||||||||  |||||||||||||  |||||||||||| |||||||| ||||||||||||||||||    
T  30355484 atcgaggatatgaaga-ttgaagatcaatcgttcttagaaggtttttgaagacaataaaaagtgaataaaattcatttcaagttc 30355567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 138 - 302
Target Start/End: Complemental strand, 24507469 - 24507306
Alignment:
Q  138 atcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--agatcaagaatt 235  Q
    |||||||||||||| ||||||||| || ||||| |||| ||| |||| ||||||| |||||||||||||||||||||||||||  |  | || ||| |||    
T  24507469 atcatgcaactccataggtgttttgagagtttt-gtagtgagaaatcctgtaaatcaacaaatcaagacatcacgtgaaggattgacgatatgaag-att 24507372  T
Q  236 gaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    ||||| ||| |||| ||||||| |   |||||| |||||||||||||||||||| ||||||||||||    
T  24507371 gaaga-caatggttgttagaagttttatgaagaaaatacaaagtgaagaaaatttatttcaagttcc 24507306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 28 - 259
Target Start/End: Complemental strand, 12972522 - 12972291
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatgtttga-ggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||||||||||||| ||| ||||| |  ||||| |||| |||||||||||| | |||| || |||||||| ||||| || || |||||||||| ||    
T  12972522 ttttctttgcatttgaaggcaactaagaggtcatttagaggagttgtcaatgttttacggaaaattttgtattgctttcattcaagacgttgtaattcag 12972423  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--a 224  Q
    || || |||| ||||||||||| || | ||||||| ||| ||||  ||| ||| |||||||||||| |  ||| |||||||| ||||||| |||| |  |    
T  12972422 ttgtatcctaaatcatgcaacttcatacgtgttttgagtctttt--tagggagaaatcatgtaaatcagaaaaccaagacataacgtgaaagatcgatga 12972325  T
Q  225 gatcaagaattgaagatcaagggttcttagaaggt 259  Q
     || ||| |||||||||||| ||||||| ||||||    
T  12972324 tatgaag-attgaagatcaatggttctttgaaggt 12972291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 26499779 - 26499712
Alignment:
Q  233 attgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagtt 300  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  26499779 attgaagatcaatggttcttagaaggtttttgaagacaatacaaagtaaagaaaattcatttcaagtt 26499712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 26512915 - 26512795
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||| ||||||||||||| ||||||||| |  ||||| |||| ||||||||| |||| | ||||| |||||||||||||| || | ||||||||||| |     
T  26512915 ttttgtttgcatttgaaggcaaataagaggtcatttagaggagttgtcaatggtttgtgtaacattttgtattgttttcattcgattcgttgtaattcac 26512816  T
Q  127 ttttagcctagatcatgcaac 147  Q
    ||||| |||||||||||||||    
T  26512815 ttttaacctagatcatgcaac 26512795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 26518031 - 26517911
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||| ||||||||||||| ||||||||| |  ||||| |||| ||||||||| |||| | ||||| |||||||||||||| || | ||||||||||| |     
T  26518031 ttttgtttgcatttgaaggcaaataagaggtcatttagaggagttgtcaatggtttgtgtaacattttgtattgttttcattcgattcgttgtaattcac 26517932  T
Q  127 ttttagcctagatcatgcaac 147  Q
    ||||| |||||||||||||||    
T  26517931 ttttaacctagatcatgcaac 26517911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 9943274 - 9943143
Alignment:
Q  41 tgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagat 139  Q
    ||||||||||||||| |  ||||| |||| ||||| || |||||||||| || |||||| ||| ||| || ||  ||||||||| | ||||| |||| ||    
T  9943274 tgaagacaaataagaggtcatttagaggagttgtccatcgtttgaggaatattttgtatagttatcattcaagctgttgtaattcacttttatcctaaat 9943175  T
Q  140 catgcaactccacaggtgttttaagtgttttt 171  Q
    |||||||||||| ||||||||| ||| |||||    
T  9943174 catgcaactccataggtgtttttagtattttt 9943143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 223
Target Start/End: Complemental strand, 32930611 - 32930416
Alignment:
Q  27 tttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgtaattta 125  Q
    ||||| ||||||||||||| |||||||||||  ||||| |||| |||||||| ||||| ||||||| |||| |||||| ||    ||||||| ||||| |    
T  32930611 tttttttttgcatttgaaggcaaataagatgtcatttagaggagttgtcaatggtttgcggaacattttgttttgtttccataagagtcgttttaattca 32930512  T
Q  126 gttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa 223  Q
     ||||| |||  | ||||||| |  | || |||||| ||| ||||  ||| ||| |||||||||||||  |||| ||||||||||| || ||||||||    
T  32930511 cttttatccttaaacatgcaatttgatagatgttttgagtctttt--tagtgagaaatcatgtaaattggcaaaacaagacatcacatggaggatcaa 32930416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 233 - 290
Target Start/End: Original strand, 33638268 - 33638325
Alignment:
Q  233 attgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattc 290  Q
    |||||||||||| |||||||| |||||| ||||||| ||||||||||||| |||||||    
T  33638268 attgaagatcaatggttcttataaggtctttgaagataatacaaagtgaataaaattc 33638325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 33638437 - 33638381
Alignment:
Q  233 attgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaatt 289  Q
    |||||||||||| |||||||| |||||| ||||||| ||||||||||||| ||||||    
T  33638437 attgaagatcaatggttcttataaggtctttgaagataatacaaagtgaataaaatt 33638381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 16387386 - 16387290
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatt 123  Q
    |||||||||  ||||||||| |||||||||  ||||| | || ||||||||| |||||||||  |||||||||||||| | || || ||||||||||    
T  16387386 ttttctttgtgtttgaagacgaataagatgtaatttagatgagttgtcaatggtttgaggaatttattgtattgtttttattcgagccgttgtaatt 16387290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 14924555 - 14924492
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaaca 90  Q
    |||||||||||||||||| ||||||| |||  ||||| |||| |||||||| ||||||||||||    
T  14924555 ttttctttgcatttgaaggcaaataatatgtaatttagaggagttgtcaatggtttgaggaaca 14924492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 161
Target Start/End: Original strand, 22262332 - 22262461
Alignment:
Q  33 tttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagtttta 131  Q
    |||| ||| |||||||||||||| |  ||||| |||| |||||||| ||||||| || |||||||||| ||||||  | ||||| ||| ||| | ||||     
T  22262332 tttgtattcgaagacaaataagaagtaatttagaggagttgtcaatggtttgagaaaaatattgtattattttcatccgagtcgatgtgattcacttttg 22262431  T
Q  132 gcctagatcatgcaactccacaggtgtttt 161  Q
     |||| || ||||||||| | |||||||||    
T  22262432 acctaaattatgcaactctaaaggtgtttt 22262461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 178; Significance: 1e-95; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 20 - 376
Target Start/End: Complemental strand, 22067952 - 22067593
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    |||||| ||||| |||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||||||| |||||||||||||||| |||| |||    
T  22067952 ttagtaatttttatttgcatttgaagacaaataagatgagagttaaaggagttgtcaatggtttgaggaacataatgtattgttttcactcgagtcattg 22067853  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgt-ttttgtagcgaggaatcat--gtaaattaacaaatcaagacatcacgtga 215  Q
    ||||| | ||||| ||||||||||||||||||| |||| ||||  | || |||||||| ||||||||||  |||||| | ||||||||||||||| ||||    
T  22067852 taattcaattttatcctagatcatgcaactccataggtattttttgagtgttttgtagtgaggaatcatatgtaaatcatcaaatcaagacatcatgtga 22067753  T
Q  216 aggatcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttag 315  Q
    |||||||| ||| || ||||||| |||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  22067752 aggatcaaggatgaacaattgaaaatcaagggttcttagaaggttgttgaagacaatacaaagtgaaaagaattcatttcaagttcctaggagtttttag 22067653  T
Q  316 accgaagaaagatcgaaaactggatgaaaatgtaagaaatcgcacgtgcggggctgcctca 376  Q
    | |||| || ||||| |||  ||| ||||| |||||||||||||| || ||||||||||||    
T  22067652 a-cgaaaaatgatcggaaatgggaagaaaacgtaagaaatcgcacttgaggggctgcctca 22067593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 20 - 398
Target Start/End: Original strand, 21471766 - 21472142
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||||||| ||| | ||||||||| |||||||||||||| |||  |||    
T  21471766 ttagtactttttccttgcatttgaagacaaataagatgatatttagaggatttgtcaatgattttaagaacatattatattgttttcactcgagtt-ttg 21471864  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 218  Q
    |||||| |||||| |||||||||||||| |||| ||||||||| |||||||| |||| |||||||||||||||| || |||||| |||||||||||| ||    
T  21471865 taattttgttttatcctagatcatgcaattccataggtgttttgagtgtttt-gtagtgaggaatcatgtaaatcaataaatcatgacatcacgtgaggg 21471963  T
Q  219 atcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagacc 318  Q
    ||||| ||| ||||||||||||| |||||||||||||||||  ||||||| |||||||||||| | |||||||||||||||||||||||| ||| | ||     
T  21471964 atcaaggatgaagaattgaagataaagggttcttagaaggttattgaagaaaatacaaagtgacg-aaattcatttcaagttcctaggagttttcatacg 21472062  T
Q  319 gaagaaagatcgaaaactggatgaaaatgtaagaaatcgcacgtgcggggctgcctcaggtgcccctgtgcctgtaccat 398  Q
    |||||| |||||||||| ||| ||||| | |||||||||||| || |||||| ||  |||||||| || ||| |||||||    
T  21472063 gaagaacgatcgaaaacaggacgaaaacgcaagaaatcgcacctgaggggctaccctaggtgcccttgcgccggtaccat 21472142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 20 - 386
Target Start/End: Original strand, 7815292 - 7815658
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    ||||||||||||  ||||||||||||| ||||||||||||| ||| |||| ||||||||| ||| || ||||||||||||| |||||||||  || ||||    
T  7815292 ttagtacttttttgttgcatttgaagataaataagatgagagttaaaggacttgtcaatggtttaagaaacatattgtatttttttcactcgggtggttg 7815391  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 218  Q
    ||||| |||||||  ||| ||||||||||| || ||||||||| |||||||| |||| || ||||||||||||| ||||||| ||||||||| |||||||    
T  7815392 taattcagttttattctaaatcatgcaacttcataggtgttttgagtgtttt-gtagtgatgaatcatgtaaatcaacaaataaagacatcatgtgaagg 7815490  T
Q  219 atcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagacc 318  Q
    ||||| |||  |||||||||||||||  |||   ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||     
T  7815491 atcaaggatatagaattgaagatcaaaagttgacagaaggttgttgaagacaatacaaagtgaagaaaattcatttcaagttcataggagttttcagacg 7815590  T
Q  319 gaagaaagatcgaaaactggatgaaaatgtaagaaatcgcacgtgcggggctgcctcaggtgcccctg 386  Q
    |||||| |||||||||  |||  |||| | |||||||||||  || |||||||| ||| | |||||||    
T  7815591 gaagaacgatcgaaaataggacaaaaacgcaagaaatcgcatttgaggggctgcttcatgcgcccctg 7815658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 28 - 335
Target Start/End: Original strand, 29544496 - 29544804
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||||||||||||||||||||||||||| ||| |||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |     
T  29544496 ttttctttgcatttgaagacaaataagatgagagttagaggagttgtcaatagtttgaggaacatattgtattgttttcactcgagtcgttgtaattcac 29544595  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaaga 226  Q
    ||||  |||| ||  ||||| |||| | ||||||| ||||||||| |||  |||||||||||||||  ||||| ||||||||||| ||||||||||||||    
T  29544596 ttttctcctaaattgtgcaattccataagtgttttgagtgttttt-tagtaaggaatcatgtaaatcgacaaaccaagacatcacatgaaggatcaaaga 29544694  T
Q  227 tc--aagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaa 324  Q
    |   |||| ||||||||||| | ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||    
T  29544695 tatgaaga-ttgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaagaa 29544793  T
Q  325 agatcgaaaac 335  Q
     |||| |||||    
T  29544794 cgatcaaaaac 29544804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 23 - 308
Target Start/End: Original strand, 315157 - 315430
Alignment:
Q  23 gtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaa 121  Q
    ||||||||||||   ||||||||| ||||||||||||| ||| |||| ||||||||| ||||| ||| |||||||||| || |||||| |||  |||| |    
T  315157 gtactttttcttaatatttgaagaaaaataagatgagagttagaggagttgtcaatggtttgaagaatatattgtattattgtcactcgagttattgtta 315256  T
Q  122 tttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatc 221  Q
    || ||||||| ||||||||||||||||||| |||||||||          ||||  |||||||||||||||   ||||||||||||||| ||||||||||    
T  315257 ttcagttttatcctagatcatgcaactccataggtgtttt----------gtagtaaggaatcatgtaaat---caaatcaagacatcatgtgaaggatc 315343  T
Q  222 aaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
    |||||| |||| ||||||| |||  |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  315344 aaagatgaagagttgaagaacaacagttctttgaaggttgttgaagacaatacaaagtgaataaaattcatttcaagttcctaggag 315430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 28 - 335
Target Start/End: Original strand, 7142075 - 7142382
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||||||||| |||||||||||| |||||   ||| || ||||||||| ||| ||||||||||| ||||| |||||||| ||||||||||||| |     
T  7142075 ttttctttgcatttaaagacaaataagttgagagagatatgagttgtcaatggtttaaggaacatattttattgctttcactcgagtcgttgtaattcac 7142174  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaag- 225  Q
    ||||| || |||||||||||||||| |||||||||||||| |||||||| ||| ||||||||||||  |||||||||||||||||||||||||||||||     
T  7142175 ttttatccaagatcatgcaactccataggtgttttaagtg-ttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaaga 7142273  T
Q  226 -atcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaa 324  Q
     || ||| ||||||  || | |||| |||  ||||  ||||||| |||||||| | |||||||| |||| ||||||||||||| || | |||| ||||||    
T  7142274 tatgaag-attgaa-ttcgatggtttttaataggtttttgaagagaatacaaattaaagaaaatccattgcaagttcctaggatatgtcagacggaagaa 7142371  T
Q  325 agatcgaaaac 335  Q
     ||||||||||    
T  7142372 cgatcgaaaac 7142382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 29 - 304
Target Start/End: Original strand, 23124878 - 23125154
Alignment:
Q  29 tttctttgcatttgaagacaaataagatgagatttataggaattgtcaatgtt-tgaggaacatattgtattgttttcactctagtcgttgtaatttagt 127  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||| | || | |||||||||||||||||||||||||||| ||||||||||||| |      
T  23124878 tttctttacatttgaagacaaataagatgagatttagaggagttgttagtggtctgaggaacatattgtattgttttcactcgagtcgttgtaattcaca 23124977  T
Q  128 tttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--ag 225  Q
    |||| || | ||||| |||||| | ||||||||| |||| |||| ||| ||| ||||||||||||  || ||||||||||||| |||||||||| |  |     
T  23124978 tttatccaaaatcatacaactctataggtgttttgagtg-ttttctagtgagaaatcatgtaaatcgaccaatcaagacatcatgtgaaggatcgaggat 23125076  T
Q  226 atcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttccta 304  Q
    || ||| ||||||| |||| |||||||| ||| |  || ||||||||||||||||||||||||||||||||| ||||||    
T  23125077 atgaag-attgaagttcaatggttcttataagattcttaaagacaatacaaagtgaagaaaattcatttcaaattccta 23125154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 41 - 352
Target Start/End: Complemental strand, 20470935 - 20470623
Alignment:
Q  41 tgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagat 139  Q
    |||||||||||||||||| | ||| |||| ||||||||| ||||||||||||||| |||||||||||||  ||||||||||||| | ||| |||||| ||    
T  20470935 tgaagacaaataagatgataattagaggagttgtcaatggtttgaggaacatattatattgttttcacttaagtcgttgtaattcactttcagcctaaat 20470836  T
Q  140 catgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagat-caagaattgaa 238  Q
    |||||| || || || |||||| |||| |||| ||| ||  || |||||||||  ||||||||||||||| | |||| |||||| |||   |  ||||||    
T  20470835 catgcatctgcatagctgttttgagtg-ttttatagtgataaagcatgtaaatcgacaaatcaagacatcgcatgaacgatcaaggatgtgaatattgaa 20470737  T
Q  239 gatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaagatcgaaaactgg 338  Q
    | |||| ||||||||||||||  |||||||||||||||| ||||||||||| ||||||||||| || ||| ||  |||| |||||| ||||||||||       
T  20470736 gttcaatggttcttagaaggttcttgaagacaatacaaaatgaagaaaattgatttcaagttcgtatgagtttccagacagaagaacgatcgaaaacaat 20470637  T
Q  339 atgaaaatgtaaga 352  Q
    ||||||| ||||||    
T  20470636 atgaaaacgtaaga 20470623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 90 - 308
Target Start/End: Original strand, 10292794 - 10293010
Alignment:
Q  90 atattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgta 189  Q
    |||||||||| |||||| || ||||||||||||| ||||||| || |||||||||||| ||| ||||||||  | |  |||||||| |||||||||||||    
T  10292794 atattgtatttttttcaatcgagtcgttgtaattcagttttatccaagatcatgcaacaccataggtgtttagact-attttgtagtgaggaatcatgta 10292892  T
Q  190 aattaacaaatcaagacatcacgtgaaggatcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaatt 289  Q
    ||| | ||||||||||||||| ||||||||| || ||| ||||| |||||||||||||||||||||||||  ||||| |||||| |||| ||||||||      
T  10292893 aatcatcaaatcaagacatcatgtgaaggataaaggatgaagaactgaagatcaagggttcttagaaggtgtttgaatacaataaaaagggaagaaaa-c 10292991  T
Q  290 catttcaagttcctaggag 308  Q
     |||| |||||||||||||    
T  10292992 aatttaaagttcctaggag 10293010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 153 - 301
Target Start/End: Original strand, 20446306 - 20446452
Alignment:
Q  153 aggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaagaattgaagatcaagggttctt 252  Q
    ||||||||| |||||||| |||| ||||| | |||||||||  ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20446306 aggtgttttgagtgtttt-gtagtgaggact-atgtaaattttcaaatcaagacatcaagtgaaggatcaaagatgaagaattgaagatcaagggttctt 20446403  T
Q  253 agaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttc 301  Q
    ||||||| |||||||||||||||||||||| |||| |||||| ||||||    
T  20446404 agaaggttgttgaagacaatacaaagtgaaaaaaaatcattttaagttc 20446452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 87 - 335
Target Start/End: Complemental strand, 9801952 - 9801705
Alignment:
Q  87 aacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcat 186  Q
    ||||||||||||| ||||||||||||||||||||||| | ||||| ||||||| |||||| |||| ||||||||| ||| ||||  ||| ||  ||||||    
T  9801952 aacatattgtatttttttcactctagtcgttgtaattcacttttatcctagattatgcaattccataggtgttttgagt-ttttaatagtgataaatcat 9801854  T
Q  187 gtaaattaacaaatcaagacatcacgtgaaggatcaa--agatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaaga 284  Q
    ||||||  ||||||||| |||||| ||||||||||||  | || ||| ||||||| |||| |||||||| |||||  || |||| |||||||||||| ||    
T  9801853 gtaaatcgacaaatcaaaacatcatgtgaaggatcaaggatatgaag-attgaag-tcaatggttcttaaaaggtttttaaagaaaatacaaagtgagga 9801756  T
Q  285 aaattcatttcaagttcctaggagattttagaccgaagaaagatcgaaaac 335  Q
    ||||| |||||||||||||||||| ||| | |  |||||| ||||||||||    
T  9801755 aaatttatttcaagttcctaggagttttcaaatggaagaacgatcgaaaac 9801705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 168 - 308
Target Start/End: Complemental strand, 2630474 - 2630334
Alignment:
Q  168 ttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaag 267  Q
    |||||||| |||||||||||||||| | ||||||||||||||| |||||| ||||| ||| |||||||||||||||||||||||||   ||| ||| |||    
T  2630474 ttttgtagtgaggaatcatgtaaatcatcaaatcaagacatcatgtgaagaatcaaggatgaagaattgaagatcaagggttcttaattggttgttaaag 2630375  T
Q  268 acaatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
    |||||| ||| |||||| |||| ||||||||||||||||||    
T  2630374 acaataaaaattgaagacaattaatttcaagttcctaggag 2630334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 39 - 223
Target Start/End: Complemental strand, 1255340 - 1255156
Alignment:
Q  39 tttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctag 137  Q
    |||||||||||||||| ||||| ||| |||| ||||||||| ||||||||| | |||||||||||||||||| |||| |||||||| | ||||| ||||     
T  1255340 tttgaagacaaataagttgagagttagaggagttgtcaatggtttgaggaataaattgtattgttttcactcgagtcattgtaattcatttttatcctaa 1255241  T
Q  138 atcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa 223  Q
    ||||||||||| || ||||||||| |||| |||||||  ||  ||| || ||||| |||||||||| ||||||| |||||||||||    
T  1255240 atcatgcaacttcataggtgttttgagtg-ttttgtaatgaaaaattatttaaatcaacaaatcaaaacatcacatgaaggatcaa 1255156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 9761493 - 9761358
Alignment:
Q  87 aacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcat 186  Q
    ||||||||||||| ||||||||||||||||||||||| | ||||| ||||||| |||||| |||| ||||||||| ||| ||||  ||| ||  ||||||    
T  9761493 aacatattgtatttttttcactctagtcgttgtaattcacttttatcctagattatgcaattccataggtgttttgagt-ttttaatagtgataaatcat 9761395  T
Q  187 gtaaattaacaaatcaagacatcacgtgaaggatcaa 223  Q
    ||||||  |||||||||||||||||||||||||||||    
T  9761394 gtaaatcgacaaatcaagacatcacgtgaaggatcaa 9761358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 60 - 302
Target Start/End: Original strand, 1074461 - 1074704
Alignment:
Q  60 atttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgt 158  Q
    ||||| |||| ||||||||| ||||||||||  |||||||| |||||| || | || |||||||||  ||||| |||| || || |||||||| | ||||    
T  1074461 atttagaggagttgtcaatggtttgaggaaccaattgtattattttcattcgattcattgtaatttgcttttatcctaaattatacaactccataagtgt 1074560  T
Q  159 tttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatca-agaattgaagatcaagggttcttagaag 257  Q
    |||  || ||||| ||| ||| |||||||||||||   ||| |||||||||| || ||||||||| |||   | ||||||||| ||| |||||||| |||    
T  1074561 tttgtgtcttttt-tagtgagaaatcatgtaaattggaaaagcaagacatcaagtaaaggatcaaggatatgaaaattgaagaccaatggttcttaaaag 1074659  T
Q  258 gtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    || ||||||||||||||||  ||||||||| | ||||||||||||    
T  1074660 gttgttgaagacaatacaagatgaagaaaagtaatttcaagttcc 1074704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 168 - 332
Target Start/End: Original strand, 7494813 - 7494977
Alignment:
Q  168 ttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatc--aagaattgaagatcaagggttcttagaaggtcgttga 265  Q
    |||||||| | | ||||||||||||| | ||||||||||||||| ||||||||||| |||   |||| |||||| | || |||||||||||||||  |||    
T  7494813 ttttgtagtgggaaatcatgtaaattgaaaaatcaagacatcacatgaaggatcaaggatatgaaga-ttgaagtt-aatggttcttagaaggtccatga 7494910  T
Q  266 agacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaagatcgaa 332  Q
    |||||||||||||||||||||||| |||||||| | ||||||| ||  |||| |||||| |||||||    
T  7494911 agacaatacaaagtgaagaaaatttatttcaagattctaggagtttccagacggaagaacgatcgaa 7494977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 79 - 302
Target Start/End: Complemental strand, 8309116 - 8308899
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcga 178  Q
    ||||||||||||  |||||||||||||| |  |||| |||| ||||||||||| |||| |||||||||||||| |  |||||| ||| ||||  |||  |    
T  8309116 gtttgaggaacag-ttgtattgttttcatttgagtcattgtgatttagttttatcctaaatcatgcaactccatacatgttttgagtctttt--tagtaa 8309020  T
Q  179 ggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaag 278  Q
    | |||||||||||| | |||| ||||||||||||||||| ||||| | |   |   || | ||||| ||||||||||||||| ||||||||||||||||     
T  8309019 gaaatcatgtaaatcagcaaaacaagacatcacgtgaagaatcaaggttatgg---tggaaatcaatggttcttagaaggtctttgaagacaatacaaaa 8308923  T
Q  279 tgaagaaaattcatttcaagttcc 302  Q
    | ||||| |||||| |||||||||    
T  8308922 taaagaagattcatatcaagttcc 8308899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 2632581 - 2632440
Alignment:
Q  21 tagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgt 119  Q
    ||||||||||||||||||||| ||||| ||||  |||||| ||| |||| ||||  ||| ||| |||||||||||||||| |||||| || | |||||||    
T  2632581 tagtactttttctttgcatttaaagactaatagtatgagagttagaggagttgttgatgattttaggaacatattgtattattttcaatcgaatcgttgt 2632482  T
Q  120 aatttagttttagcctagatcatgcaactccacaggtgtttt 161  Q
    |||| ||||||| || ||||||||||||| || |||||||||    
T  2632481 aattcagttttatccaagatcatgcaacttcataggtgtttt 2632440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 204 - 345
Target Start/End: Complemental strand, 21545789 - 21545647
Alignment:
Q  204 gacatcacgtgaaggatcaa--agatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttc 301  Q
    ||||||||||||||||||||  | || ||| |||||||||||| ||||||||||| ||  |||||||||||| ||||||||||||||||||||||||||     
T  21545789 gacatcacgtgaaggatcaaggatatgaag-attgaagatcaatggttcttagaaagtatttgaagacaataaaaagtgaagaaaattcatttcaagttt 21545691  T
Q  302 ctaggagattttagaccgaagaaagatcgaaaactggatgaaaa 345  Q
    ||||||| ||  ||||  |||||  | ||||||| |||||||||    
T  21545690 ctaggagtttccagacgaaagaataaccgaaaacaggatgaaaa 21545647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 20017143 - 20017210
Alignment:
Q  241 tcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  20017143 tcaatggttcttagaaggttcttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggag 20017210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 21545894 - 21545797
Alignment:
Q  71 ttgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgt 167  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||| | | ||||| |||| ||||||||||| || |||| ||||||||||    
T  21545894 ttgtcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaactcacttttatcctaaatcatgcaactacataggttttttaagtgt 21545797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 111 - 302
Target Start/End: Complemental strand, 24597057 - 24596867
Alignment:
Q  111 agtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatca 210  Q
    ||||||||||||| | ||||| |||| |||||||||||||  ||||||||||||| |||||  || ||| |||| |||||||   |||| ||||||||||    
T  24597057 agtcgttgtaattcaattttatcctaaatcatgcaactccgtaggtgttttaagtcttttt--agtgagaaatcgtgtaaatcggcaaaacaagacatca 24596960  T
Q  211 cgtgaaggatcaaagatcaaga-attgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    |||| | |||| | |||  | | ||||||| |||  ||||| ||||||    ||||||||||||||||||||||||||||||||| |||||||    
T  24596959 cgtggaagatcgaggatataaagattgaagttcagtggttcatagaagaaatttgaagacaatacaaagtgaagaaaattcatttgaagttcc 24596867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 179 - 317
Target Start/End: Complemental strand, 7778026 - 7777889
Alignment:
Q  179 ggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaag 278  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| |||    ||||||| | | |  ||||||| ||||| ||||| ||||||| ||||    
T  7778026 ggaatcatgtaaatcaacaaagcaagacatcacgtgaaggatcaacgatatgaaattgaa-aactaatgttcttaaaaggttgttgaggacaatataaag 7777928  T
Q  279 tgaagaaaattcatttcaagttcctaggagattttagac 317  Q
    ||||||||| ||||  |||||||||| ||| ||||||||    
T  7777927 tgaagaaaaatcataccaagttcctaagagtttttagac 7777889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 20446212 - 20446297
Alignment:
Q  24 tactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcact 108  Q
    |||||||||||||||||||||||||| |||||||||| ||| |||| |||||||| |||| || |||||||||| |||||||||||    
T  20446212 tactttttctttgcatttgaagacaattaagatgagaattagaggagttgtcaatggtttcagaaacatattgttttgttttcact 20446297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 167 - 308
Target Start/End: Original strand, 9070504 - 9070645
Alignment:
Q  167 tttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaagaat-tgaagatcaagggttcttagaaggtcgttga 265  Q
    |||||| || ||| ||||||||||||| || ||| |||||||| ||||||||||||| ||| | |||| |  | |||||| |||||||||||||  || |    
T  9070504 tttttgaagtgagaaatcatgtaaattgacgaataaagacatcgcgtgaaggatcaaggat-atgaatatcgaaatcaagtgttcttagaaggtttttta 9070602  T
Q  266 agacaatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
    |||||||| ||||||||||| ||||| ||||||||| ||||||    
T  9070603 agacaatataaagtgaagaatattcagttcaagttcgtaggag 9070645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 510 - 636
Target Start/End: Original strand, 21472211 - 21472348
Alignment:
Q  510 ggataaagcccaattttcttctcttaatccctaagtaatctcat--tataaa---------gacccttgcacactattttatacattcacaaaaatttga 598  Q
    |||||||| |||||||||||||||||||||| |||||| |||||  ||||||         ||||||||||||||||||||| |||||| |||  |||||    
T  21472211 ggataaagtccaattttcttctcttaatccccaagtaacctcatgctataaattaaatagagacccttgcacactattttattcattcagaaacttttga 21472310  T
Q  599 cggggaaggtaaacgtcaagcatcagagttccaaggca 636  Q
    ||| ||||| ||  ||||||||| ||||||||||||||    
T  21472311 cggtgaaggcaagggtcaagcataagagttccaaggca 21472348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 481 - 547
Target Start/End: Complemental strand, 22067512 - 22067446
Alignment:
Q  481 ttttttcttgttttccaagctggatcgacggataaagcccaattttcttctcttaatccctaagtaa 547  Q
    ||||| || |||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||    
T  22067512 tttttgctggttttccaagctagatcgaaggataaagctcaattttcttctcttaatccctaagtaa 22067446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 231 - 378
Target Start/End: Original strand, 7493493 - 7493640
Alignment:
Q  231 gaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaagatcg 330  Q
    ||||||||||||||||||||||| |||||  ||||||| |||||||| |||| |||||||||| ||| || ||||||| ||| | |  |||||| |||      
T  7493493 gaattgaagatcaagggttcttaaaaggttattgaagataatacaaaatgaaaaaaattcattccaaatttctaggagttttcaaagggaagaacgataa 7493592  T
Q  331 aaaactggatgaaaatgtaagaaatcgcacgtgcggggctgcctcagg 378  Q
    |||||  || |||||   |||||||||||| || |||| |||||||||    
T  7493593 aaaacaagacgaaaacacaagaaatcgcacttgaggggatgcctcagg 7493640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 79 - 223
Target Start/End: Complemental strand, 7372652 - 7372510
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagc-ctagatcatgcaactccacaggtgttttaagtgtttttgtagcg 177  Q
    |||||| |||| | |||||||||||||| || ||||||||||||| | ||||| | | | ||||||||||| || ||||||||| ||||||||| ||| |    
T  7372652 gtttgatgaactttttgtattgttttcattcgagtcgttgtaattcaattttatcacgaaatcatgcaacttcataggtgttttcagtgttttt-tagtg 7372554  T
Q  178 aggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa 223  Q
    || |||| ||||||| | |||||||||| ||||  |||||||||||    
T  7372553 agaaatcttgtaaatcagcaaatcaagatatca--tgaaggatcaa 7372510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 147
Target Start/End: Original strand, 9066119 - 9066227
Alignment:
Q  38 atttgaagacaaataagatgagatttataggaattgtcaatgtttg-aggaacatattgtattgttttcactctagtcgttgtaatttagttttagccta 136  Q
    ||||||||||||||||| ||| |  || || | ||||||||||||  |||||||||||||||||||||||||| |||||  |||||| | ||||| || |    
T  9066119 atttgaagacaaataagttgatagatagagaagttgtcaatgtttttaggaacatattgtattgttttcactcgagtcg--gtaattcacttttatccaa 9066216  T
Q  137 gatcatgcaac 147  Q
    |||||||||||    
T  9066217 gatcatgcaac 9066227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 302
Target Start/End: Original strand, 18496542 - 18496816
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||||||||||||  ||| ||| ||  ||||| || | |||||||| |||||||||||   ||| |||||||||| || | || |||||||| |     
T  18496542 ttttctttgcatttgaaggaaaacaagttgcaatttagagaagttgtcaattgtttgaggaactatttgaattgttttcattcgaatcattgtaattcat 18496641  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaaga 226  Q
    ||||| |||| ||||||| ||| || ||||||||| ||  | ||||  | |||  |||||||||||    ||| |  ||||||  |||||||||||| ||    
T  18496642 ttttatcctaaatcatgcgacttcataggtgttttgagcctatttg--gtgagatatcatgtaaatcggaaaaacgggacatcgagtgaaggatcaagga 18496739  T
Q  227 tc--aagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    |   |||| |||||||  || ||||||||||| || |||||||| |||||||  ||||||||||||||||||||||||    
T  18496740 tatgaaga-ttgaagaataatggttcttagaatgttgttgaagaaaatacaagatgaagaaaattcatttcaagttcc 18496816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 546
Target Start/End: Original strand, 20446622 - 20446681
Alignment:
Q  487 cttgttttccaagctggatcgacggataaagcccaattttcttctcttaatccctaagta 546  Q
    ||||||||||||| |||||| ||| ||||||| || ||||||||||||||||||||||||    
T  20446622 cttgttttccaagatggatcaacgaataaagctcagttttcttctcttaatccctaagta 20446681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 223
Target Start/End: Complemental strand, 3269104 - 3268909
Alignment:
Q  27 tttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaattta 125  Q
    ||||| ||||||||||||   || ||||| |  ||||| |||| |||||| || |||||| ||||| |||||||||||||  |  ||| ||||||||| |    
T  3269104 tttttttttgcatttgaaagaaactaagaggttatttagaggagttgtcattggtttgagtaacattttgtattgttttcgtttgagttgttgtaattca 3269005  T
Q  126 gttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa 223  Q
     ||||| |||| ||||||||||| |  | ||||||||||| ||||  ||| ||| ||||||||||||   |||| ||||| ||||| |||||||||||    
T  3269004 cttttatcctaaatcatgcaacttcgtatgtgttttaagtctttt--tagtgagaaatcatgtaaatcggcaaaacaagatatcacatgaaggatcaa 3268909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 241 - 323
Target Start/End: Complemental strand, 10670499 - 10670417
Alignment:
Q  241 tcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaaga 323  Q
    |||| ||||||||||||||  |  |||||||||||||||||| |||| ||||||||||||| |||||| ||| |||| |||||    
T  10670499 tcaatggttcttagaaggttttctaagacaatacaaagtgaataaaaatcatttcaagttcgtaggagttttcagacggaaga 10670417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 249 - 302
Target Start/End: Original strand, 4828986 - 4829039
Alignment:
Q  249 tcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    ||||||||| |  ||||||||||||||||||||||| |||||||||||||||||    
T  4828986 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 4829039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 46054675 - 46054796
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||| |||| |||||||| |||||||||||  ||||| |||| |||||| || |||||||||||  || ||||||||| | || |||||||||||||||     
T  46054675 ttttttttgtatttgaaggcaaataagatgtcatttaaaggagttgtcattgatttgaggaacaatttatattgttttaattcaagtcgttgtaatttac 46054774  T
Q  127 ttttagcctagatcatgcaact 148  Q
    |||||   || |||||||||||    
T  46054775 ttttataataaatcatgcaact 46054796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 287
Target Start/End: Complemental strand, 5312857 - 5312664
Alignment:
Q  93 ttgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaat 192  Q
    |||||||||||||| |  ||||||||||||| | ||||| | || | |||||||||||| ||||||||| ||| ||||  ||| ||  ||||||||||||    
T  5312857 ttgtattgttttcatttgagtcgttgtaattcacttttatcttatagcatgcaactccataggtgttttgagtctttt--tagtgataaatcatgtaaat 5312760  T
Q  193 taacaaatcaagacatcacgtgaaggatcaaagat-caagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaa 287  Q
       ||||   | |||||| |||||||||||| |||   || |||||| || || |||||||||||| |  |||||||||||||||  |||||||||    
T  5312759 cggcaaaaataaacatcaagtgaaggatcaaggatatgaggattgaacataaatggttcttagaagatttttgaagacaatacaagatgaagaaaa 5312664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 9755815 - 9755965
Alignment:
Q  66 aggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaag 164  Q
    ||||||||||| | ||||||||||| | ||||||| ||||||||| ||||||||||||||| ||||       ||||||||  | || ||||||||| ||    
T  9755815 aggaattgtcactagtttgaggaacgttttgtatttttttcactcgagtcgttgtaatttactttt-------atcatgcattttcataggtgtttttag 9755907  T
Q  165 tgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa 223  Q
     | |||| ||| ||| ||||||| ||||  ||||||| |||||||| ||||||||||||    
T  9755908 cg-ttttctagtgagaaatcatgcaaatcgacaaatctagacatcatgtgaaggatcaa 9755965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 9800611 - 9800677
Alignment:
Q  66 aggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagtttta 131  Q
    ||||||||||| | ||||||||||| | ||||||| ||||||||| ||||||||||||||| |||||    
T  9800611 aggaattgtcactagtttgaggaacgttttgtatttttttcactcgagtcgttgtaatttactttta 9800677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 17881631 - 17881515
Alignment:
Q  33 tttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagtttta 131  Q
    ||||||||||||| ||||| ||| |  ||||| |||| ||||||||| ||| |||||| | ||||||| |||||| || | || |||||||||| |||||    
T  17881631 tttgcatttgaaggcaaattagaagtcatttaaaggagttgtcaatgattttaggaactttttgtattattttcattcgaatcattgtaatttaatttta 17881532  T
Q  132 gcctagatcatgcaact 148  Q
     | || |||||||||||    
T  17881531 tcataaatcatgcaact 17881515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 223
Target Start/End: Complemental strand, 20461776 - 20461591
Alignment:
Q  37 catttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcct 135  Q
    ||||| ||| ||||||| |||  |||||  ||| ||||||||| |||||||||||  |||||||||||||| || ||||||||||| | | ||| | |||    
T  20461776 catttcaaggcaaataatatgtaatttaagggagttgtcaatggtttgaggaacaatttgtattgttttcattcgagtcgttgtaactcaatttcatcct 20461677  T
Q  136 agatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa 223  Q
    | |||| |||||   | ||||||||  ||| ||||  ||| ||| ||||||||||||   ||||  ||||||||| ||||||||||||    
T  20461676 aaatcacgcaacatgataggtgtttcgagtctttt--tagtgagaaatcatgtaaatcggcaaaataagacatcaagtgaaggatcaa 20461591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 37144963 - 37145031
Alignment:
Q  93 ttgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgtttt 161  Q
    ||||||| |||||| || |||||||||||| || ||||| |||| |||||||||||||  |||||||||    
T  37144963 ttgtattattttcattcaagtcgttgtaatatatttttatcctaaatcatgcaactccgtaggtgtttt 37145031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 50
Target Start/End: Original strand, 4092641 - 4092671
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaa 50  Q
    |||||||||||||||||||||||||||||||    
T  4092641 ttagtactttttctttgcatttgaagacaaa 4092671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 2353378 - 2353249
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||||||||||||||| ||||||| |  ||||| |||| ||||  ||| |||| ||||||| ||||||||| |||| || || |||||||||| |     
T  2353378 ttttctttgcatttgaagac-aataagaggtcatttagaggagttgtacatgctttggggaacattttgtattgtattcattcgagacgttgtaattca- 2353281  T
Q  127 ttttagcctagatcatgcaactccacaggtgtttt 161  Q
        | |||| |||||||||||||| |||||||||    
T  2353280 ---catcctaaatcatgcaactccataggtgtttt 2353249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 4828820 - 4828892
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactcca 151  Q
    ||||||||||| | ||||||| |||| | || | || |||||||||| ||||| |||| ||||||||||||||    
T  4828820 gtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactcca 4828892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 4977805 - 4977765
Alignment:
Q  181 aatcatgtaaattaacaaatcaagacatcacgtgaaggatc 221  Q
    ||||||||||||  ||||||||||||||||| |||||||||    
T  4977805 aatcatgtaaatatacaaatcaagacatcacatgaaggatc 4977765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 7956158 - 7956254
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatt 123  Q
    ||||||||||||||||||  ||||||| ||  ||||| |||| || |||||| ||| | ||| |  |||||||||||||| || |||||||||||||    
T  7956158 ttttctttgcatttgaaggaaaataagttgtaatttagaggagttatcaatggtttaaagaaaaatttgtattgttttcattcgagtcgttgtaatt 7956254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 12358695 - 12358655
Alignment:
Q  233 attgaagatcaagggttcttagaaggtcgttgaagacaata 273  Q
    |||||||||||| ||||||||||||||  ||||||||||||    
T  12358695 attgaagatcaatggttcttagaaggtttttgaagacaata 12358655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 75 - 171
Target Start/End: Complemental strand, 12358851 - 12358755
Alignment:
Q  75 caatgtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgttttt 171  Q
    ||||||||||| || || ||||||| || ||| |  ||||||||||||| | ||||| |||| ||||| ||||| || ||||||||| ||| |||||    
T  12358851 caatgtttgagaaatattttgtatttttctcatttgagtcgttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtcttttt 12358755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 173; Significance: 1e-92; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 20 - 383
Target Start/End: Original strand, 30781729 - 30782092
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||| ||||  ||  ||| || || ||||||||||||||||| || || | |||    
T  30781729 ttagtaatttttctttgcatttgaagacaaataagatgagagttagaggagttgttgataattttagaaatatattgtattgttttcaatcgagacattg 30781828  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 218  Q
    ||||| ||||||| || ||||||| |||||||| ||||||||| |||||||| |||| |||||||||||||||| | ||||||||||||||| |||||||    
T  30781829 taattcagttttatccaagatcatacaactccataggtgttttgagtgtttt-gtagtgaggaatcatgtaaatcatcaaatcaagacatcatgtgaagg 30781927  T
Q  219 atcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagacc 318  Q
    ||||| ||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||| | ||| || |     
T  30781928 atcaaggatgaagaattgaagatcaagggttcttaaaaggttgttgaagacaatacaaagtgaagaaaattgatttcaagttcctaggtgttttcaggca 30782027  T
Q  319 gaagaaagatcgaaaactggatgaaaatgtaagaaatcgcacgtgcggggctgcctcaggtgccc 383  Q
     ||||| |||||||||| ||| ||||| | |||||||||||| || | |||||||||||| ||||    
T  30782028 aaagaacgatcgaaaacaggaagaaaacgcaagaaatcgcacctgagaggctgcctcaggcgccc 30782092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 20 - 308
Target Start/End: Complemental strand, 12424060 - 12423772
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    |||||||||||||||||||||||||||||||||||||||||   | |||  |||| |||| ||||||||||||||  |||||||||||||| |||| |||    
T  12424060 ttagtactttttctttgcatttgaagacaaataagatgagagacagaggcgttgttaatggtttgaggaacatatgatattgttttcactcgagtcattg 12423961  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 218  Q
    ||||| ||||||| | ||||||||||||||||| | ||||||| ||  ||| |||||  |||||||   ||||| | |||||||| ||| || |||| ||    
T  12423960 taattcagttttatcttagatcatgcaactccatatgtgttttgaga-tttctgtagtaaggaatcgcataaatcatcaaatcaaaacaccatgtgacgg 12423862  T
Q  219 atcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
    ||||| ||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12423861 atcaaggatgaagaattgaagatcaaaggttcttagaaggttgttgaagacaatacaaagtgaaggaaattcatttcaagttcctaggag 12423772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 28 - 253
Target Start/End: Complemental strand, 8247795 - 8247570
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  | |||||| ||||||||||||||| |||| ||||||||  |||| ||||||||| |    
T  8247795 ttttctttgcatttgaagacaaataagatgagagttagaggagatatcaatggtttgaggaacatattttattattttcacttgagtcattgtaattttg 8247696  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaaga 226  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||||||||| |||||| ||    
T  8247695 ttttaccctagatcatgcaactccataggtgttttgagtgtttt-gtagtgaggaatcatgtaaatcaacaaatcaagacatcacgtgaaagatcaagga 8247597  T
Q  227 tcaagaattgaagatcaagggttctta 253  Q
    | ||||||||| |||||||||||||||    
T  8247596 tgaagaattgaggatcaagggttctta 8247570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 28 - 377
Target Start/End: Original strand, 26657453 - 26657802
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||||||||||||||||||| | |||||  || |||| ||||||||| ||||||||| ||| |||||||||||||||| | ||||||||||| |     
T  26657453 ttttctttgcatttgaagacaaatatgttgagagatagaggagttgtcaatggtttgaggaatataatgtattgttttcactcgattcgttgtaattcac 26657552  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaag- 225  Q
    ||||| ||||||||| ||||||||| ||||||||| |||| |||||||| ||  ||||||||||||  |||||||||||||| | |||||||||||| |     
T  26657553 ttttatcctagatcacgcaactccataggtgttttgagtg-ttttgtagtgaaaaatcatgtaaatcgacaaatcaagacattaggtgaaggatcaaggc 26657651  T
Q  226 -atcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaa 324  Q
     || || ||| |||| ||||  ||||||| |||||  |||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||  |||||    
T  26657652 tatgaa-aatcgaag-tcaatagttcttataaggtttttgaagacaaaacaaagtgaagaaaattcatttcaagttcctaggagttttcagacgaaagaa 26657749  T
Q  325 agatcgaaaactggatgaaaatgtaagaaatcgcacgtgcggggctgcctcag 377  Q
     |||||||||| |||  |||| ||||||| |||||| |   ||||||||||||    
T  26657750 tgatcgaaaacgggagaaaaacgtaagaattcgcacatcaagggctgcctcag 26657802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 30 - 304
Target Start/End: Complemental strand, 11770130 - 11769855
Alignment:
Q  30 ttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagtt 128  Q
    ||||||||||||||||| ||||||||||||| ||| || | ||||||||| ||| ||||||||||||||||||||||||||  |||||||||||| | ||    
T  11770130 ttctttgcatttgaagataaataagatgagagttagagaatttgtcaatggtttaaggaacatattgtattgttttcactcgtgtcgttgtaattcactt 11770031  T
Q  129 ttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatc 228  Q
    ||| |||| |||||| |||| ||  ||||| || |||||||| | || ||| ||||||||||||  | ||||||||||||||| |||| ||||||||||     
T  11770030 ttatcctaaatcatgaaacttcatgggtgtgttgagtgtttt-gcagtgagaaatcatgtaaatcgaaaaatcaagacatcacatgaatgatcaaagata 11769932  T
Q  229 --aagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttccta 304  Q
      |||| ||||||| ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  11769931 tgaaga-ttgaagaccaatggttcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaagttccta 11769855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 20 - 308
Target Start/End: Original strand, 30675453 - 30675741
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    |||| ||||||  ||| |||||| ||||||||||||||| | ||| |||| ||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  30675453 ttagaacttttctttttcatttgtagacaaataagatgaaaattagaggagttgtcaatggtttgaggaacatattgtattgttttcactcgagtcgttg 30675552  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 218  Q
    ||||  | ||||  |||| |||||||||||||| ||||||||| |||| |||| ||| ||| ||||||||||||   ||| | ||||||||| |||||||    
T  30675553 taatacacttttgtcctatatcatgcaactccataggtgttttgagtg-ttttatagtgagaaatcatgtaaatcggcaatttaagacatcatgtgaagg 30675651  T
Q  219 atca--aagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
    ||||  ||  | ||| |||||| ||||| ||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||    
T  30675652 atcaagaatgtgaag-attgaa-atcaatggttcttagaaggtttttgaagataatacaaagtgaagaaaattcatttcaagttcctaggag 30675741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 28 - 290
Target Start/End: Complemental strand, 25730709 - 25730446
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatgt-ttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||||||||||| ||||||||||||||| ||| |||   ||||||||  ||||||| | |||||||||||||||| || | || ||| |||| |     
T  25730709 ttttctttgcatttgaaaacaaataagatgagagttagagggggtgtcaatggcttgaggagcgtattgtattgttttcattcaaatcattgaaattcaa 25730610  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--a 224  Q
    ||||| |||| ||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| ||||| |||||||||||  |    
T  25730609 ttttatcctaaatcatgcaacttcacaggtgttttgagtg-ttttgtagcgagaaatcatgtaaatcgacaaatcaagatatcacatgaaggatcaagga 25730511  T
Q  225 gatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattc 290  Q
    ||| ||| ||| |||||||| ||||||| ||||||  |||| ||||||  ||||||||||||||||    
T  25730510 gatgaag-atttaagatcaatggttcttggaaggtttttgacgacaatcgaaagtgaagaaaattc 25730446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 28 - 308
Target Start/End: Original strand, 50047158 - 50047432
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||||||||||||||||||||||||| |  || |||| ||||||||| |||||| ||||||||||||||||||||||| |||| | |||||| |     
T  50047158 ttttctttgcatttgaagacaaataagatgaaaagtagaggagttgtcaatgatttgagaaacatattgtattgttttcactcgagtcatggtaattcac 50047257  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaag- 225  Q
    ||||| |||| ||||| |||||||| |  |||||| |||| |||||||||||| |||||||||       || | |||| ||||||||||||||||| |     
T  50047258 ttttatcctaaatcatacaactccatatatgttttgagtg-ttttgtagcgagaaatcatgta-------aagtgaagaaatcacgtgaaggatcaaggg 50047349  T
Q  226 -atcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
     || ||  |||||||||||| ||| |||| |||||  |||||||||||||||| |||||||||||||||| |||||||||||||    
T  50047350 tatgaa-tattgaagatcaatggtacttaaaaggttattgaagacaatacaaaatgaagaaaattcattttaagttcctaggag 50047432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 28 - 308
Target Start/End: Original strand, 23223388 - 23223671
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgtttt-cactctagtcgttgtaattta 125  Q
    ||||||||||||||  |||||| ||||||| || ||| |||| ||||||||| ||||||||||| |||||||| |||| ||||| | |||||||||||||    
T  23223388 ttttctttgcattttgagacaattaagatgggagttagaggagttgtcaatggtttgaggaacacattgtattttttttcactcgattcgttgtaattta 23223487  T
Q  126 gttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa-- 223  Q
     ||||| |||| |||||||||||||| ||||||||| | || |||||||| ||| |||||||||||| ||||| |||||||||| | |||||  ||||      
T  23223488 cttttatcctaaatcatgcaactccaaaggtgtttttaatg-ttttgtagtgagaaatcatgtaaatcaacaagtcaagacatcgcatgaagattcaagg 23223586  T
Q  224 agatcaagaattgaagatcaagggttcttagaagg-tcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
    | || ||| |||||| | |||   ||| ||||||| |  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  23223587 atatgaag-attgaaaaccaataattcatagaaggttttttgaagacaatacaaagtgaaaaaaattcatttcaagttcctaggag 23223671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 28 - 324
Target Start/End: Complemental strand, 23519893 - 23519610
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||||| |||||||||||||| |||||||  || |  | |||| ||| |||||||||||||||||||||   ||||||| |||| |||||||| |     
T  23519893 ttttctttgcttttgaagacaaatatgatgagagatagaaaagttgttaatagtttgaggaacatattgtatt---ttcactcaagtcattgtaattcac 23519797  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaaga 226  Q
    ||||| ||||||||||||||||| | ||          |||||| |||| ||| ||||||||||||  ||| |||||||||| ||||||||||||||  |    
T  23519796 ttttatcctagatcatgcaactctatag----------tgtttt-gtagtgagaaatcatgtaaatcgacacatcaagacattacgtgaaggatcaagaa 23519708  T
Q  227 tcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaa 324  Q
    |    ||||||||| ||| |||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||| ||| |||| ||||||    
T  23519707 tatgaaattgaagaccaatggttcttagaaggttgttgaagacaatagaaagtgaagaaaatttatttcaagttcctaggagttttcagacggaagaa 23519610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 28 - 308
Target Start/End: Complemental strand, 18301143 - 18300860
Alignment:
Q  28 ttttctttgcatttgaagacaaataaga--tgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaattt 124  Q
    ||||||||||||||||||||||| || |  ||||| |||||||  ||||||||| ||||||||| |||||||| |||||||  |  |||||||||||||     
T  18301143 ttttctttgcatttgaagacaaacaaaaaatgagagttataggggttgtcaatggtttgaggaatatattgtactgttttctttaaagtcgttgtaattg 18301044  T
Q  125 agttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa- 223  Q
    | ||||| |  | ||||||||||| || ||||||||| ||||||||   || || |||||||||||||  |||||||||||||||||||||||||||||     
T  18301043 acttttatcgaaaatcatgcaacttcataggtgttttgagtgttttaa-agtgatgaatcatgtaaatagacaaatcaagacatcacgtgaaggatcaag 18300945  T
Q  224 -agatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
     | || ||| ||| || | ||| ||||||||||||||  |||||||||||||| ||||||||||| | ||||||| ||||||||||    
T  18300944 gatatgaag-attaaataccaatggttcttagaaggtttttgaagacaatacagagtgaagaaaaattatttcaaattcctaggag 18300860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 47 - 297
Target Start/End: Complemental strand, 25494598 - 25494357
Alignment:
Q  47 caaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgca 145  Q
    |||||| ||||| | ||| |||| ||||||||| ||||||||||||||||| |||||||| ||  |||| |||||||||| ||||| |||| ||||||||    
T  25494598 caaataggatgaaagttagaggagttgtcaatggtttgaggaacatattgtcttgttttctcttgagtccttgtaatttacttttatcctaaatcatgca 25494499  T
Q  146 actccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa-agatcaagaattgaagatcaa 244  Q
    ||| || |||||||||          |||| ||| ||||||||||||  ||||||||||||||||| | ||||| ||| | || |||| ||||||| |||    
T  25494498 actacataggtgtttt----------gtagtgagaaatcatgtaaatcgacaaatcaagacatcacattaaggagcaagatatgaaga-ttgaagaccaa 25494410  T
Q  245 gggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaa 297  Q
     ||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  25494409 tggttcttagaaggtttttgaagacaatacaaagtgaagaaaattcatttcaa 25494357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 91 - 286
Target Start/End: Complemental strand, 25727983 - 25727788
Alignment:
Q  91 tattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaa 190  Q
    ||||||||||||||||||||| ||||||||||| | ||||| |||| |||||||||||| | ||||||||| |||| |||||||| ||| ||||||||||    
T  25727983 tattgtattgttttcactctaatcgttgtaattcacttttatcctaaatcatgcaactcaataggtgttttgagtg-ttttgtagtgagaaatcatgtaa 25727885  T
Q  191 attaacaaatcaagacatcacgtgaaggatcaa--agatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaa 286  Q
    ||  ||||||||| | ||||| |||||||| ||  | || ||| |||||||||||| ||||||| ||||||  ||||||||||| |||||||||||||    
T  25727884 atcgacaaatcaatatatcacatgaaggattaaggatatgaag-attgaagatcaatggttcttggaaggtttttgaagacaatccaaagtgaagaaa 25727788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 91 - 286
Target Start/End: Complemental strand, 25736391 - 25736196
Alignment:
Q  91 tattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaa 190  Q
    ||||||||||||||||||||| ||||||||||| | ||||| |||| |||||||||||| | ||||||||| |||| |||||||| ||| ||||||||||    
T  25736391 tattgtattgttttcactctaatcgttgtaattcacttttatcctaaatcatgcaactcaataggtgttttgagtg-ttttgtagtgagaaatcatgtaa 25736293  T
Q  191 attaacaaatcaagacatcacgtgaaggatcaa--agatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaa 286  Q
    ||  ||||||||| | ||||| |||||||| ||  | || ||| |||||||||||| ||||||| ||||||  ||||||||||| |||||||||||||    
T  25736292 atcgacaaatcaatatatcacatgaaggattaaggatatgaag-attgaagatcaatggttcttggaaggtttttgaagacaatccaaagtgaagaaa 25736196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 28 - 300
Target Start/End: Original strand, 26102034 - 26102306
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||||||||||||  ||||||||| |  ||||| || | || |||||| |||||||| ||| |||||||||||||| || ||| ||||||||| |     
T  26102034 ttttctttgcatttgaacgcaaataagaggtcatttagagaatttatcaatggtttgaggaccattttgtattgttttcattcgagttgttgtaattcac 26102133  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaaga 226  Q
    ||||| |||| ||||||||||||||  |||||||| ||| |||||  || |||  ||| || ||||  ||||| |||||||||||||||| |||||| ||    
T  26102134 ttttatcctaaatcatgcaactccatgggtgttttgagtcttttt--agtgagatatcgtgcaaatcgacaaaacaagacatcacgtgaatgatcaagga 26102231  T
Q  227 tc--aagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagtt 300  Q
    |   |||||| ||||||||| | || |||||||||  |||||||||||||||  ||| |||||||||| |||||||    
T  26102232 tatgaagaat-gaagatcaatgatttttagaaggtttttgaagacaatacaagttgaggaaaattcatctcaagtt 26102306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 71 - 302
Target Start/End: Complemental strand, 19257898 - 19257669
Alignment:
Q  71 ttgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgttt 169  Q
    ||||||||| |||||||||| |  ||||||||||||| ||||||| ||||||||   ||||| |||| ||||||||| |||  ||||||||| ||| |||    
T  19257898 ttgtcaatgatttgaggaactttctgtattgttttcattctagtcattgtaattcgattttatcctaaatcatgcaagtccttaggtgttttgagtattt 19257799  T
Q  170 ttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatc--aagaattgaagatcaagggttcttagaaggtcgttgaag 267  Q
    ||  || ||| |||| ||||||||  || | ||||||||||| |||| |||| | |||   |||| ||||| ||||||  ||||||||||||| ||||||    
T  19257798 tt--agtgagaaatcgtgtaaattggcataacaagacatcacatgaaagatcgaggatatgaaga-ttgaacatcaag--ttcttagaaggtctttgaag 19257704  T
Q  268 acaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    |||||||||||||||||||||| ||||||| ||||    
T  19257703 acaatacaaagtgaagaaaatttatttcaatttcc 19257669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 21451961 - 21451820
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatgtttgaggaacatattgtattgttttcactctagtcgttgt 119  Q
    ||||||| |||||||||||||||||||||||||||||||||  || | || ||||||||| |  |||||||||||||||| ||||||||| | || || |    
T  21451961 ttagtacgttttctttgcatttgaagacaaataagatgagagatagaagagttgtcaatggtataggaacatattgtattattttcactcgactcattat 21451862  T
Q  120 aatttagttttagcctagatcatgcaactccacaggtgtttt 161  Q
    ||||  |||||| |||||||  |||||||||| |||||||||    
T  21451861 aattctgttttatcctagatagtgcaactccataggtgtttt 21451820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 28 - 276
Target Start/End: Original strand, 31313529 - 31313777
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatgt-ttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||||||||||||| |||||||||    ||||| || | |||||||||| || |||||| | |||||||||||||  || ||||||||||||| |     
T  31313529 ttttctttgcatttgaaggcaaataagagttcatttagagaagttgtcaatgtctttaggaacgttttgtattgttttcgttcaagtcgttgtaattcac 31313628  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatca--aa 224  Q
    ||||| |||| ||||||||||| || |||||||||  | |||||| |||  || |||||||||||||   ||| ||| |||||||||||||||| |  ||    
T  31313629 ttttatcctaaatcatgcaacttcataggtgtttt--gagtttttttagtaagaaatcatgtaaattggaaaaacaatacatcacgtgaaggattaagaa 31313726  T
Q  225 gatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaa 276  Q
     || ||||| |||||||||| | |||||| |||||  |||||||||||||||    
T  31313727 tatgaagaa-tgaagatcaatgattcttataaggtttttgaagacaatacaa 31313777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 12810299 - 12810418
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||  |||| |||||||||||| |||||  || |||| ||||||||| ||||||||||||||||||||||||||| || ||||||||||||| |     
T  12810299 ttttctttatatttaaagacaaataagttgagagatagaggagttgtcaatggtttgaggaacatattgtattgttttcattcaagtcgttgtaattcat 12810398  T
Q  127 ttttagcctagatcatgcaa 146  Q
    ||||| ||||||||||||||    
T  12810399 ttttatcctagatcatgcaa 12810418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 28 - 223
Target Start/End: Original strand, 34381685 - 34381882
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||| ||||||||||||| |||||||||||  ||||| |||| |||| |||| ||||| ||||||||| ||||||||||| || ||||||||||||| |     
T  34381685 ttttatttgcatttgaaggcaaataagatgtaatttagaggagttgttaatggtttgaagaacatattatattgttttcattcgagtcgttgtaattcac 34381784  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttt-tgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa 223  Q
    || ||  ||| |||| |||||| || ||||||||| ||| |||| | ||| ||  ||| ||||||||  ||||||||| |||||||||||| ||||||    
T  34381785 ttctattctaaatcacgcaacttcataggtgttttgagtattttgtatagtgaaaaataatgtaaatcgacaaatcaaaacatcacgtgaaagatcaa 34381882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 80 - 302
Target Start/End: Complemental strand, 26854402 - 26854183
Alignment:
Q  80 tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgag 179  Q
    |||||||||| | ||||||| |||||| || ||||||||||||| | ||||| ||||  |||| ||||| || || |||||| ||| |||||     |||    
T  26854402 tttgaggaactttttgtattcttttcattcaagtcgttgtaattcaattttatcctaattcatacaacttcatagatgttttgagtcttttta----gag 26854307  T
Q  180 gaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatc--aagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaa 277  Q
     |||||||||||    |||| |||||||| | |||||||||||| |||   |||| |||||| |||| |||||||||||| |  ||||||||||||||||    
T  26854306 aaatcatgtaaaccggcaaaacaagacattaagtgaaggatcaatgatatgaaga-ttgaagttcaatggttcttagaagatatttgaagacaatacaaa 26854208  T
Q  278 gtgaagaaaattcatttcaagttcc 302  Q
    ||||||||||||||||| |||||||    
T  26854207 gtgaagaaaattcatttgaagttcc 26854183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 477 - 547
Target Start/End: Complemental strand, 21451695 - 21451625
Alignment:
Q  477 ccacttttttcttgttttccaagctggatcgacggataaagcccaattttcttctcttaatccctaagtaa 547  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  21451695 ccactttttgcttgttttcctagctggatcggcggataaagcccaattttcttctcttaatacctaagtaa 21451625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 24903435 - 24903356
Alignment:
Q  26 ctttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgtttt 104  Q
    ||||||||||||||||||||||||||| ||||||| |||  ||| ||||||||| |||||||||||||||||||| ||||    
T  24903435 ctttttctttgcatttgaagacaaatatgatgagaattagtggagttgtcaatgatttgaggaacatattgtattttttt 24903356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 28 - 302
Target Start/End: Original strand, 18391059 - 18391334
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||| || |||| |||||||||||||||  ||||| || | ||||||||| |||||| ||||| || |||| |||||| |  ||||||||||||| |     
T  18391059 ttttctgtgtatttaaagacaaataagatgtcatttaaagaagttgtcaatggtttgagtaacattttatattattttcatttgagtcgttgtaattaac 18391158  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaaga 226  Q
    ||||| |||||||||||||| |||| ||| ||||  || || ||| |||  || |||||||||||||| | ||  |||||||||| ||||| || || ||    
T  18391159 ttttatcctagatcatgcaattccataggcgttt--agagtatttttaggaagaaatcatgtaaattagcgaaataagacatcacatgaagaatgaagga 18391256  T
Q  227 -tcaagaattgaagatcaagggttcttagaagg-tcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
     | || ||  ||||||||| |||||||| |||| |  || ||||||||||||| |||| |||| | || |||||||||    
T  18391257 tttaaaaaacgaagatcaatggttcttaaaaggtttttttaagacaatacaaaatgaaaaaaaattatctcaagttcc 18391334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 52271177 - 52271103
Alignment:
Q  233 attgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctagga 307  Q
    ||||||| |||| ||| ||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  52271177 attgaagttcaatggtacttagaaggtatttgaagacaatacaaagtgaagaaaattcatttcaaattccaagga 52271103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 28 - 227
Target Start/End: Original strand, 18795158 - 18795356
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||||||||||||  |||||||| |  ||||| |||| || |||||| |||||||||||| |||||| ||||||| |  |||  ||||||||||     
T  18795158 ttttctttgcatttgaaggaaaataagaggtcatttagaggatttatcaatggtttgaggaacattttgtatcgttttcatttgagtaattgtaatttac 18795257  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaaga 226  Q
    ||||| ||||  |||| || || || ||||||||| |||  |||  ||| ||| |||| ||||||| | |||| ||||||||||| ||| ||||||||||    
T  18795258 ttttatcctaagtcatacagcttcataggtgttttgagtcattt--tagtgagaaatcgtgtaaatcagcaaaacaagacatcacatgatggatcaaaga 18795355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 9328363 - 9328424
Alignment:
Q  247 gttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
    |||||||||||||  ||||||||||||| |||||||||||||||| | ||||||||||||||    
T  9328363 gttcttagaaggtttttgaagacaatactaagtgaagaaaattcagtccaagttcctaggag 9328424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 23505967 - 23506007
Alignment:
Q  262 ttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23505967 ttgaagacaatacaaagtgaagaaaattcatttcaagttcc 23506007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 25373932 - 25373996
Alignment:
Q  237 aagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttc 301  Q
    |||| ||| |||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||    
T  25373932 aagaccaatggttcttagaaggttgtttaagacaatacaagatgaagaaaattcatttcaagttc 25373996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 302
Target Start/End: Complemental strand, 15299007 - 15298734
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||||||||| || ||||| ||| |  ||||| | || ||||||||| |||||||||  | ||||||||| |||| |  | || |||||||| ||    
T  15299007 ttttctttgcatttgcaggcaaattagaagtcatttacaagagttgtcaatggtttgaggaagtttttgtattgtattcatttgaatcattgtaattaag 15298908  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--a 224  Q
    ||||| || | ||||||||||| || |||||||||  |||| | | ||| ||  ||||||||||||   |||| ||||| |||| || ||||||| |  |    
T  15298907 ttttatccaaaatcatgcaacttcataggtgtttt--gtgtctatttagtgataaatcatgtaaatcggcaaaacaagaaatcatgtaaaggatcgagga 15298810  T
Q  225 gatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
     || ||| ||| |||||||| |||||||| ||| |  |||||| |||||||| ||||| |||||||||||||||||||    
T  15298809 tatgaag-attcaagatcaatggttcttaaaagttatttgaag-caatacaatgtgaataaaattcatttcaagttcc 15298734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 25266482 - 25266340
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatgtt-tgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||||||||||||||| | ||||| |||  || || | ||||||||| | |||  ||||||||||||||||||||||| |||| |||||||| |     
T  25266482 ttttctttgcatttgaagacaga-aagataagagatagagaagttgtcaatggtatgaaaaacatattgtattgttttcactcgagtcattgtaattcat 25266384  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttt 170  Q
    ||||| | | ||||||| |||| || | ||||||| ||||||||    
T  25266383 ttttatcttggatcatggaacttcatatgtgttttgagtgtttt 25266340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 27461319 - 27461186
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||| |||| ||||||| |||||||||| |  ||||| || ||||||| ||  |||||||||||| |||||||||||||| || ||| ||| ||||| |     
T  27461319 ttttatttgtatttgaatacaaataagaggtcatttagagcaattgtccataatttgaggaacattttgtattgttttcattcaagttgttataattcac 27461220  T
Q  127 ttttagcctagatcatgcaactccacaggtgttt 160  Q
    ||||| |||| || |||||||| || ||||||||    
T  27461219 ttttatcctaaattatgcaacttcataggtgttt 27461186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 302
Target Start/End: Original strand, 25126667 - 25126731
Alignment:
Q  238 agatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    |||||||  ||||||||||  || ||||| |||||||||| ||||||||||||||||||||||||    
T  25126667 agatcaatagttcttagaaaatctttgaatacaatacaaaatgaagaaaattcatttcaagttcc 25126731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 246 - 329
Target Start/End: Complemental strand, 9252529 - 9252446
Alignment:
Q  246 ggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaagatc 329  Q
    |||| |||||||||  ||||||||||||| |||||||||||||||| | |||||||||| ||| ||| |||  |||||| ||||    
T  9252529 ggttattagaaggtttttgaagacaatactaagtgaagaaaattcagtccaagttcctatgagttttcagattgaagaacgatc 9252446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 246 - 317
Target Start/End: Complemental strand, 23521638 - 23521567
Alignment:
Q  246 ggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagac 317  Q
    ||||||||||||||  |||||||||||| ||||||||| ||| | || ||||||||||||||| ||| ||||    
T  23521638 ggttcttagaaggttcttgaagacaatagaaagtgaagtaaaattatatcaagttcctaggagttttaagac 23521567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 248 - 304
Target Start/End: Original strand, 9353209 - 9353265
Alignment:
Q  248 ttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttccta 304  Q
    ||||||||||||  ||||||| ||||| |||||||||||||||| | ||||||||||    
T  9353209 ttcttagaaggtttttgaagaaaatactaagtgaagaaaattcagtccaagttccta 9353265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 23521727 - 23521675
Alignment:
Q  168 ttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggat 220  Q
    |||||||| ||| ||||||||||||  ||| ||||||||||||||||||||||    
T  23521727 ttttgtagtgagaaatcatgtaaatcgacacatcaagacatcacgtgaaggat 23521675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 482 - 548
Target Start/End: Complemental strand, 23521411 - 23521345
Alignment:
Q  482 tttttcttgttttccaagctggatcgacggataaagcccaattttcttctcttaatccctaagtaat 548  Q
    |||| ||||||||||||| |||||||  | | ||||||||||||||||| ||||| | |||||||||    
T  23521411 ttttgcttgttttccaagttggatcggtgcaaaaagcccaattttcttcccttaaactctaagtaat 23521345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 21548677 - 21548758
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttt 160  Q
    ||||||| ||| | || ||||||||||| || ||||||||||||| ||||||| |||| |  ||||||||||| | ||||||    
T  21548677 gtttgagaaactttttatattgttttcattcgagtcgttgtaattcagttttatcctaaaaaatgcaactccataagtgttt 21548758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 302
Target Start/End: Complemental strand, 25665670 - 25665633
Alignment:
Q  265 aagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  25665670 aagacaatacaaagtgaagaaaaatcatttgaagttcc 25665633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 482 - 526
Target Start/End: Complemental strand, 12423611 - 12423567
Alignment:
Q  482 tttttcttgttttccaagctggatcgacggataaagcccaatttt 526  Q
    |||| |||||||| |||||||||||| |||||||||| |||||||    
T  12423611 ttttgcttgtttttcaagctggatcggcggataaagctcaatttt 12423567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 13807838 - 13807794
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatt 123  Q
    |||||| |||||| |||||||||||||| || |||||||||||||    
T  13807838 gtttgatgaacattttgtattgttttcattcaagtcgttgtaatt 13807794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 170; Significance: 6e-91; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 20 - 360
Target Start/End: Original strand, 16054263 - 16054603
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||| |||| ||||||||| ||| |||||||| ||||||||||||||||| ||| ||||    
T  16054263 ttagtactttttctttgcatttgaagacaaataagataagagttagaggagttgtcaatgatttaaggaacattttgtattgttttcactcgagttgttg 16054362  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 218  Q
    ||||| | ||||| ||||||||||  ||||||| || |||||| | |||||| |||| |||||||||||||||| |  || ||||||||||| |||||||    
T  16054363 taattcatttttatcctagatcataaaactccatagatgttttgattgtttt-gtagtgaggaatcatgtaaatcattaattcaagacatcatgtgaagg 16054461  T
Q  219 atcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagacc 318  Q
    ||||| | | | ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||  ||||     
T  16054462 atcaaggttgatgaattgaagatcaagggttcttagaaggttgttgaagaaaatacaaagtgaagaaaattcatttcaagttcctaggagtttccagaca 16054561  T
Q  319 gaagaaagatcgaaaactggatgaaaatgtaagaaatcgcac 360  Q
     ||||| |||||||||| ||| ||||| | ||||||||||||    
T  16054562 aaagaacgatcgaaaacgggaagaaaacgcaagaaatcgcac 16054603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 20 - 345
Target Start/End: Complemental strand, 13082083 - 13081755
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| |||||| ||||  ||||| ||||||||||| ||| ||||    
T  13082083 ttagtactttttctttgcatttgaagacaaataagatgagagttagaggagttgtcaatgatttgagaaacacgttgtagtgttttcactcgagtagttg 13081984  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaat---catgtaaattaacaaatcaagacatcacgtga 215  Q
    ||||| |||| || |||||||||||||||| || ||||||||| || ||||| |||| |||||||   ||||||||| | ||||| || |||||| ||||    
T  13081983 taattcagttgtatcctagatcatgcaacttcataggtgttttgagagtttt-gtagtgaggaatattcatgtaaatcatcaaattaatacatcatgtga 13081885  T
Q  216 aggatcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttag 315  Q
    |||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||| ||| || |||    
T  13081884 aggatcaaagataaataattgaagatcaagggttcttagaaggttgttgaagacaatacaaaatgaagaaaattcatttcaagtttctatgagtttctag 13081785  T
Q  316 accgaagaaagatcgaaaactggatgaaaa 345  Q
    ||  ||||| |||| ||||| ||| |||||    
T  13081784 acaaaagaacgatcaaaaacgggaagaaaa 13081755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 28 - 344
Target Start/End: Complemental strand, 16052415 - 16052098
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||| ||||||||||| ||||||||| |||||| ||| |||| ||||||||| |||||  |||||||| || ||||||||||| ||||||| ||||| |     
T  16052415 ttttatttgcatttgaggacaaataaaatgagagttagaggagttgtcaatggtttgaataacatattttaatgttttcactcgagtcgttataattcac 16052316  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--a 224  Q
     |||| | || |||||||||||| | ||||||||| |||||||| |||| ||| |||||| ||||| |||||||||||||||||| |||||||| ||  |    
T  16052315 atttaccttaaatcatgcaactcaataggtgttttgagtgtttt-gtagtgagaaatcatctaaatcaacaaatcaagacatcacatgaaggataaagga 16052217  T
Q  225 gatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaa 324  Q
     || ||| ||| |||| ||| | ||||||||||||  |||||||||||||||| ||||||||||||||||||||||||| |||| || ||||| ||||||    
T  16052216 tatgaag-attaaagaccaatgattcttagaaggtttttgaagacaatacaaaatgaagaaaattcatttcaagttccttggagtttctagacggaagaa 16052118  T
Q  325 agatcgaaaactggatgaaa 344  Q
      ||||||||| ||||||||    
T  16052117 caatcgaaaacgggatgaaa 16052098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 79 - 376
Target Start/End: Original strand, 28902118 - 28902414
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcga 178  Q
    ||||||| |||||||||||||||||||| || ||||||||||||| | ||||| |||| | || |||| |||| | ||||||| |||||||  |||| ||    
T  28902118 gtttgagaaacatattgtattgttttcattcgagtcgttgtaattcacttttatcctataccacgcaaatccataagtgtttttagtgttta-gtagtga 28902216  T
Q  179 ggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaag 278  Q
    | |||||||||||| |||||||| ||||||||||||||||||||| |||    |||| |||| ||| ||||||||||||||  |||||||||||||||||    
T  28902217 gaaatcatgtaaatcaacaaatcgagacatcacgtgaaggatcaatgatattaaattaaagaccaatggttcttagaaggttattgaagacaatacaaag 28902316  T
Q  279 tgaagaaaattcatttcaagttcctaggagattttagaccgaagaaagatcgaaaactggatgaaaatgtaagaaatcgcacgtgcggggctgcctca 376  Q
    |||| ||||||||||| ||||||||||||| ||| ||||  ||||| ||| |||||| ||| ||||| | ||||||  | || || ||||||||||||    
T  28902317 tgaataaaattcattttaagttcctaggagttttcagacgaaagaacgattgaaaacgggacgaaaacgcaagaaaaaggacatgaggggctgcctca 28902414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 26882377 - 26882566
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    ||||||||||||||| ||| | |||||||||||| |||||||||| |||| ||| ||||| ||| |||| |||| |||||||||||||||| |||| |      
T  26882377 ttagtactttttcttcgcaatcgaagacaaataaaatgagatttaaaggagttgccaatggtttaaggagcataatgtattgttttcactcgagtcatca 26882476  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatc 209  Q
    |||| |||||||| ||||||||||||||||||| ||||||||| | || |||||||| |||||||||||||||| | ||||||||||||||    
T  26882477 taatatagttttatcctagatcatgcaactccataggtgttttgattg-ttttgtagtgaggaatcatgtaaatcatcaaatcaagacatc 26882566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 20 - 223
Target Start/End: Complemental strand, 29047462 - 29047262
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatgtttgaggaacatattgtattgttttcactctagtcgttgt 119  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||| |||| ||||||||| |  ||||||| |||||||||||||||||| ||||  |||    
T  29047462 ttagtactttttctttgcatttgaaaacaaataagatgagagttagaggagttgtcaatggt--aggaacacattgtattgttttcactcgagtcactgt 29047365  T
Q  120 aatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagga 219  Q
    |||| | |||||   | ||||||||||||||| |  |||||| |||| |||||||| |||||||||||||||| |  || ||||||||||| ||||||||    
T  29047364 aattcaattttataatggatcatgcaactccatatatgttttgagtg-ttttgtagtgaggaatcatgtaaatcataaattcaagacatcatgtgaagga 29047266  T
Q  220 tcaa 223  Q
    ||||    
T  29047265 tcaa 29047262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 28 - 300
Target Start/End: Original strand, 32239264 - 32239537
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||| |||||||||| | ||||||| | | ||| |||| ||||||||| |||||| |||||||||||||||||| |||  |||||||| |||| |     
T  32239264 ttttctttacatttgaagatagataagataataattagaggagttgtcaatggtttgagtaacatattgtattgtttttacttgagtcgttgcaattcac 32239363  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--a 224  Q
    ||||| | || |||||||||||||| |  |||||| |||| |||||||| ||| |||| |||||||| ||||||| ||||||||| |||||||| ||  |    
T  32239364 ttttatcttaaatcatgcaactccataaatgttttgagtg-ttttgtagtgagaaatcgtgtaaattgacaaatcgagacatcacatgaaggataaagga 32239462  T
Q  225 gatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagtt 300  Q
     || ||| ||||||| |||| |||| ||| |||||  || ||||||||| ||||||||||||||||||||||||||    
T  32239463 tatgaag-attgaagttcaatggtttttataaggttcttaaagacaataaaaagtgaagaaaattcatttcaagtt 32239537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 27 - 324
Target Start/End: Complemental strand, 5570280 - 5569981
Alignment:
Q  27 tttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaattta 125  Q
    ||||| |||||||||||||| ||||||||||||||||  |||| ||||||||  |||||||||||||||||||||||||||||| ||| ||||||||| |    
T  5570280 tttttttttgcatttgaagaaaaataagatgagatttgaaggagttgtcaatactttgaggaacatattgtattgttttcactcgagttgttgtaattca 5570181  T
Q  126 gttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa-- 223  Q
     ||||| |||| ||||||||||| |  ||||||||| |||| |||| ||| || | || ||||||||  ||||||| ||||||||||||  |||| ||      
T  5570180 cttttatcctatatcatgcaacttcgtaggtgttttgagtg-ttttctagtgatgcattatgtaaatcgacaaatcgagacatcacgtg--ggattaatt 5570084  T
Q  224 agatcaagaa--ttgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaa 321  Q
    ||   | |||  || |||| ||| |||||||||||| |  || ||||||||||||  ||||||||||||||||||| ||| |||||| ||| |||| |||    
T  5570083 aggatatgaagtttaaagaccaatggttcttagaagctttttaaagacaatacaagatgaagaaaattcatttcaacttcataggagttttcagacggaa 5569984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 28 - 324
Target Start/End: Complemental strand, 28901478 - 28901191
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||||||||||| ||||||||| |||||  || |||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||       
T  28901478 ttttctttgcatttgaatacaaataagttgagagatagaggagttgtcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaattcgt 28901379  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--a 224  Q
    ||||| ||||||| ||||||||||  || ||          |||||||| ||  ||| ||||| ||  ||||||||||||||||  ||||| |||||  |    
T  28901378 ttttatcctagataatgcaactccttagatg----------ttttgtagtgataaataatgtacatcgacaaatcaagacatcatatgaagaatcaatga 28901289  T
Q  225 gatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaa 324  Q
     || ||| ||||||  |||| |||||||| |||||   |||||||||||||||||||||||||||||||||||| ||||||||| || ||||| ||||||    
T  28901288 tatgaag-attgaa-ttcaatggttcttataaggtttctgaagacaatacaaagtgaagaaaattcatttcaagctcctaggagtttctagacggaagaa 28901191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 60 - 302
Target Start/End: Complemental strand, 27097907 - 27097665
Alignment:
Q  60 atttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgt 158  Q
    ||||| |||||||||||||| |||||||||||| ||| |||||||||| |  ||||||||||||| ||||||| | || ||||||||||| || ||||||    
T  27097907 atttagaggaattgtcaatggtttgaggaacatgttgcattgttttcatttgagtcgttgtaattcagttttatcataaatcatgcaacttcataggtgt 27097808  T
Q  159 tttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--agatcaagaattgaagatcaagggttcttagaa 256  Q
    || |||| ||||| ||| ||| ||||||||||||   |||| ||||||||||||||| ||||  |  | || ||| |||||  || ||  ||||||||||    
T  27097807 ttaaagtctttttttagtgagaaatcatgtaaatcggcaaaacaagacatcacgtgatggattgatcatatgaag-attga--atgaatagttcttagaa 27097711  T
Q  257 ggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    |||| |||||||||||||||  ||||||||||||| ||||||||||    
T  27097710 ggtctttgaagacaatacaagttgaagaaaattcaattcaagttcc 27097665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 14977245 - 14977120
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattg-ttttcactctagtcgttgtaattta 125  Q
    |||||||||||||| |||||||||||||||||| ||| |||| |||||||| |||||||||||||||||||||| ||||||||| |||| |||||||| |    
T  14977245 ttttctttgcattttaagacaaataagatgagagttagaggagttgtcaatggtttgaggaacatattgtattgtttttcactcgagtcattgtaattca 14977146  T
Q  126 gttttagcctagatcatgcaactcca 151  Q
     ||||| |||| ||||||||||||||    
T  14977145 cttttatcctaaatcatgcaactcca 14977120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 79 - 294
Target Start/End: Complemental strand, 14424898 - 14424684
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcga 178  Q
    ||||||||||| | || ||| ||||||| || ||||||||||||| ||||||| |||| |||||||||||||| ||||||||||   |||||| ||| ||    
T  14424898 gtttgaggaactttttatatggttttcattcgagtcgttgtaattcagttttatcctaaatcatgcaactccataggtgtttta--ggtttttttagtga 14424801  T
Q  179 ggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaaga--attgaagatcaagggttcttagaaggtcgttgaagacaatacaa 276  Q
    | ||||||||||||   |||| ||||||| || | |||||||  | ||| ||||  |||||||||||| ||||||||||||||  ||||| ||||| |||    
T  14424800 gaaatcatgtaaatcggcaaaacaagacaacaagggaaggatatatgat-aagaagattgaagatcaatggttcttagaaggtttttgaacacaattcaa 14424702  T
Q  277 agtgaagaaaattcattt 294  Q
     |||||||||||||||||    
T  14424701 tgtgaagaaaattcattt 14424684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 12956466 - 12956600
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||||||||||||| ||||||||||||| ||| |||| ||||||||| ||||||||| |||||||||||||||||||| |||| | |||||| |     
T  12956466 ttttctttgcatttgaagataaataagatgagagttagaggagttgtcaatggtttgaggaaaatattgtattgttttcactcgagtcatcgtaattcac 12956565  T
Q  127 ttttagcctagatcatgcaactccacaggtgtttt 161  Q
    ||||| |||| |||||| ||||| | |||||||||    
T  12956566 ttttatcctaaatcatgtaactctataggtgtttt 12956600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 111 - 335
Target Start/End: Original strand, 24696642 - 24696867
Alignment:
Q  111 agtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatca 210  Q
    ||||||||||||||| || || |||| ||||| ||| | |||||||||||| ||||||||  |||  || |||||||||||| |||||||||||||||||    
T  24696642 agtcgttgtaatttacttctatcctaaatcatacaatttcacaggtgtttttagtgtttta-tagtaagaaatcatgtaaatcaacaaatcaagacatca 24696740  T
Q  211 cgtgaaggatcaa--agatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagt-gaagaaaattcatttcaagttcctagga 307  Q
    | | |||||||||  | || ||| |||||||| ||   |||||||||||||  ||||||| ||||||||||  || ||||||||||||||||| ||||||    
T  24696741 cataaaggatcaaggatatgaag-attgaagaccacttgttcttagaaggtttttgaagaaaatacaaagtaaaaaaaaattcatttcaagtttctagga 24696839  T
Q  308 gattttagaccgaagaaagatcgaaaac 335  Q
      || ||||| ||| || ||||||||||    
T  24696840 ttttctagacggaaaaacgatcgaaaac 24696867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 85 - 276
Target Start/End: Complemental strand, 28260369 - 28260178
Alignment:
Q  85 ggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatc 184  Q
    ||||||| ||||||| |||||| | ||||||||||||||||| |||| |||| ||||||  |||||| ||||||||| ||| ||||  ||| ||| ||||    
T  28260369 ggaacattttgtattattttcattttagtcgttgtaatttaggtttatcctaaatcatgagactccataggtgttttgagtctttt--tagtgagaaatc 28260272  T
Q  185 atgtaaattaacaaatcaagacatcacgtgaaggatcaa--agatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaa 276  Q
    |||||||| | |||| |||||||||||||| ||||||||  | |||||  ||||||||||||  ||||||| || ||  ||||||| |||||||    
T  28260271 atgtaaatcagcaaaacaagacatcacgtggaggatcaagtatatcaaatattgaagatcaatagttcttataaagtttttgaagataatacaa 28260178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 28 - 307
Target Start/End: Original strand, 24120208 - 24120480
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaa-tgtttgaggaacatattgta-ttgttttcactctagtcgttgtaattta 125  Q
    ||||||||||||||||||| ||||||||||||| ||| |||| |||||||  |||||||||| |||||||| || ||||||| | | |||||||| || |    
T  24120208 ttttctttgcatttgaagagaaataagatgagagttagaggagttgtcaacggtttgaggaatatattgtattttttttcacccaattcgttgtagttaa 24120307  T
Q  126 gttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaag 225  Q
     ||||| |||| || |||||||||||  |||||||||          ||  ||||||||||| ||||  || ||||||||||||| |||||||||||| |    
T  24120308 cttttatcctaaataatgcaactccattggtgtttta----------taatgaggaatcatgcaaatcgaccaatcaagacatcatgtgaaggatcaagg 24120397  T
Q  226 atcaagaa--ttgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctagga 307  Q
    || |  ||  ||||| | ||| | ||||||||||||  | ||||| |||| ||  |||||||||||||||||||||||||||||    
T  24120398 at-attaattttgaataccaatgtttcttagaaggttttcgaagataataaaagatgaagaaaattcatttcaagttcctagga 24120480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 71 - 308
Target Start/End: Complemental strand, 22894625 - 22894389
Alignment:
Q  71 ttgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgttt 169  Q
    ||||||||| ||||||| |||||||||||| ||| ||||| | || |||| ||| | ||||| | |||||||| |||||||| |||| |||| ||||||     
T  22894625 ttgtcaatggtttgaggtacatattgtattctttacactcgaatcattgtgattcacttttatcttagatcattcaactccataggtatttttagtgttc 22894526  T
Q  170 ttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaaga-attgaagatcaagggttcttagaaggtcgttgaaga 268  Q
    |  ||| ||| ||||||||||||  | ||||||||| ||||| ||||||||||| |||  | | ||||||  ||||  ||||||||| |||  |||||||    
T  22894525 ta-tagtgagaaatcatgtaaatcga-aaatcaagatatcacatgaaggatcaatgatataaagattgaat-tcaattgttcttagatggtttttgaaga 22894429  T
Q  269 caatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
    |||||||||||||||||||||| ||| ||||||| |||||    
T  22894428 caatacaaagtgaagaaaattcttttgaagttccaaggag 22894389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 79 - 302
Target Start/End: Complemental strand, 30851185 - 30850963
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcga 178  Q
    ||||||||||  | || |||| |||||| || | ||||||||||| || |||| |||| |||||||||||| | |||||||||  |  | | | ||| ||    
T  30851185 gtttgaggaagtttttatattattttcattcgaatcgttgtaattcagatttatcctaaatcatgcaactcaataggtgtttt--ggatctatctagtga 30851088  T
Q  179 ggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--agatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaa 276  Q
    | |||| ||||||| | |||| |||||||||  ||||||||||||  | || ||| |||||||||||| ||||||||||| ||| ||||| | |||||||    
T  30851087 gaaatcgtgtaaatcatcaaagcaagacatctagtgaaggatcaaggatatgaag-attgaagatcaacggttcttagaatgtctttgaatataatacaa 30850989  T
Q  277 agtgaagaaaattcatttcaagttcc 302  Q
    ||||||||||||| ||||||||||||    
T  30850988 agtgaagaaaattaatttcaagttcc 30850963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 35 - 208
Target Start/End: Original strand, 31436463 - 31436635
Alignment:
Q  35 tgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagc 133  Q
    ||||||||||| |||||||||||  ||||| |||| ||||||||| ||||||||| | | | |||| |||||| || ||||  ||||||||||||||| |    
T  31436463 tgcatttgaaggcaaataagatgtaatttagaggagttgtcaatgatttgaggaataaactatatttttttcattcgagtcagtgtaatttagttttatc 31436562  T
Q  134 ctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacat 208  Q
    ||| ||||||||||| || ||||||||| | | ||||  ||| ||| |||||||||||| |||||| ||||||||    
T  31436563 ctaaatcatgcaactacataggtgttttgaatctttt--tagtgagaaatcatgtaaatcaacaaaacaagacat 31436635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 196 - 335
Target Start/End: Complemental strand, 11310225 - 11310087
Alignment:
Q  196 caaatcaagacatcacgtgaaggatcaaagatc--aagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatt 293  Q
    ||||||||||||||| |||||||||||| |||   |||| || ||| |||| | ||||||||||||  ||||| |||||||||||||||||||||| |||    
T  11310225 caaatcaagacatcatgtgaaggatcaaggatatgaagattt-aag-tcaatgattcttagaaggtttttgaaaacaatacaaagtgaagaaaatt-att 11310129  T
Q  294 tcaagttcctaggagattttagaccgaagaaagatcgaaaac 335  Q
    ||||||||||||||| || ||||| |||||| ||||||||||    
T  11310128 tcaagttcctaggagtttctagacggaagaacgatcgaaaac 11310087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 79 - 302
Target Start/End: Complemental strand, 28292185 - 28291964
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcga 178  Q
    ||||||||||||| || | || |||||| |  ||| ||| ||||| ||||||| ||||  | |||||||| |||| |||||||  |||||||| ||| ||    
T  28292185 gtttgaggaacattttatgttcttttcatttgagttgttataattcagttttatcctaatttatgcaacttcacaagtgtttt--gtgtttttttagtga 28292088  T
Q  179 ggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatc--aagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaa 276  Q
    | ||||||||||||   ||||  |||||||||| ||||||||  | |||   |||| |||||||| || ||||||||||||||| |||||||||||||||    
T  28292087 g-aatcatgtaaatcgccaaaataagacatcacatgaaggattgaggatatgaaga-ttgaagattaatggttcttagaaggtctttgaagacaatacaa 28291990  T
Q  277 agtgaagaaaattcatttcaagttcc 302  Q
    | ||||||||||  ||||||||||||    
T  28291989 aatgaagaaaataaatttcaagttcc 28291964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 79 - 220
Target Start/End: Complemental strand, 35135508 - 35135367
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcga 178  Q
    |||| ||| |||| |||||||||||| |||| |||| |||||||| | ||||| |||| |||||||||||||||| ||||||| ||| ||||| |   ||    
T  35135508 gttttaggtacattttgtattgtttttactcgagtcattgtaattcatttttatcctaaatcatgcaactccacatgtgttttgagtctttttttttgga 35135409  T
Q  179 ggaatcatgtaaattaacaaatcaagacatcacgtgaaggat 220  Q
    | ||||| ||||||  ||||| |||||||||||||| |||||    
T  35135408 gaaatcaggtaaatcgacaaaacaagacatcacgtggaggat 35135367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 93 - 302
Target Start/End: Original strand, 11437462 - 11437671
Alignment:
Q  93 ttgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaat 192  Q
    |||| ||||||||| || ||||||| ||||| ||||| | | ||| ||||||||||||| | || |||| ||| |||||  || ||| ||||||||||||    
T  11437462 ttgtgttgttttcattcgagtcgttataattcagtttcatcataggtcatgcaactccatatgtattttgagtcttttt--agtgagaaatcatgtaaat 11437559  T
Q  193 taacaaatcaagacatcacgtgaa-ggatcaaagatca-agaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattc 290  Q
       |||| |||||||||| ||||| ||||||| |||   | |||||||| |||| ||||||||||||    |||||||||||||| |||||||| |||||    
T  11437560 cggcaaaacaagacatcaagtgaaaggatcaaggatatgaaaattgaagttcaatggttcttagaagacatttgaagacaatacagagtgaagataattc 11437659  T
Q  291 atttcaagttcc 302  Q
    |||| |||||||    
T  11437660 atttgaagttcc 11437671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 111 - 302
Target Start/End: Original strand, 29291831 - 29292021
Alignment:
Q  111 agtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatca 210  Q
    ||||||||||||  ||||||| |||| |||||||||||  | | || |||| ||| |||||  ||  || ||||||||||||   |||| ||||| ||||    
T  29291831 agtcgttgtaatgcagttttatcctaaatcatgcaactttataagtattttgagtcttttt--agtaagaaatcatgtaaatcggcaaaacaagatatca 29291928  T
Q  211 cgtgaaggatcaaagatcaagaat--tgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    ||||||| ||| | ||| | ||||  |||||||||| ||||||||||||||| |||||||||| | |||||||| |||||||||||||| ||||    
T  29291929 cgtgaagaatcgaggat-atgaatattgaagatcaatggttcttagaaggtctttgaagacaacagaaagtgaaaaaaattcatttcaaattcc 29292021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 27 - 302
Target Start/End: Original strand, 5153734 - 5154009
Alignment:
Q  27 tttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaattta 125  Q
    ||||| |||| ||||||||| |||| ||| |  ||||| |||| ||||||||| ||| || || |  ||||||| |||||| || |||| |||||||| |    
T  5153734 tttttttttgtatttgaagataaattagaagttatttagaggagttgtcaatgattttagaaaaaatttgtattattttcattcgagtcattgtaattca 5153833  T
Q  126 gttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa-- 223  Q
    |||||| | || ||||| |||||| | ||||||||| ||| |||||  ||  || ||||||||||||   |||| |||||||| | |||||||||| |      
T  5153834 gttttatcttaaatcattcaactcgataggtgttttgagtcttttt--agtaagaaatcatgtaaataggcaaaacaagacataaagtgaaggatcgagg 5153931  T
Q  224 agatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    | || ||| |||||||||||| | || || ||||||  |||||||||||| ||  |||| |||||||||||||||||||    
T  5153932 atatgaag-attgaagatcaatgattattggaaggtttttgaagacaatataacatgaataaaattcatttcaagttcc 5154009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 27 - 302
Target Start/End: Original strand, 30543739 - 30544013
Alignment:
Q  27 tttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatgtttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||| ||||||||||||||||||| | | |  | ||| |||| || ||||||||||| |||| | |||||||||||||| |  ||| ||||||||| |     
T  30543739 tttttttttgcatttgaagacaaattaaaagttaattagaggagttctcaatgtttgatgaactt-ttgtattgttttcatttgagttgttgtaattcac 30543837  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--a 224  Q
    ||||| |||| ||||||||| |  | ||||||||| ||| ||||||  | ||| ||||||||||||    ||| ||||| ||||| ||||||||  |  |    
T  30543838 ttttatcctaaatcatgcaattatataggtgttttgagtctttttg--gtgagaaatcatgtaaatcggtaaaacaagatatcacatgaaggattgagga 30543935  T
Q  225 gatcaagaattgaagatcaagggttc-ttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
     || ||| ||||||| |||| ||||| ||| ||| |  || ||||||||| ||||||||||||||||||||||||||||    
T  30543936 tatgaag-attgaagttcaatggttctttaaaagatatttaaagacaatataaagtgaagaaaattcatttcaagttcc 30544013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 10866965 - 10867157
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||| ||| |||| ||||||||| |  ||||| || | ||||||||| ||||||||| || |||||||||||||| |  ||||||||||||| ||    
T  10866965 ttttctttgaattcgaaggcaaataagaggtcatttagagtagttgtcaatggtttgaggaatattttgtattgttttcatttgagtcgttgtaattcag 10867064  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatc 221  Q
    ||||| |  | |||||||||||||| ||||| ||| | | ||||  ||| ||| |||||||||| |   |||| ||||| | |||||||||||||    
T  10867065 ttttatctcaaatcatgcaactccaaaggtgctttgaatctttt--tagtgagaaatcatgtaagtcggcaaaacaagataccacgtgaaggatc 10867157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 222
Target Start/End: Complemental strand, 24584810 - 24584669
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcga 178  Q
    ||||||||||  | |||||||||||||| || |||| |||||||| | ||||| | || |||||||||||| | |||| |||| ||| ||||||||| ||    
T  24584810 gtttgaggaattttttgtattgttttcattcgagtcattgtaattcatttttatcataaatcatgcaactctataggtattttgagt-tttttgtagtga 24584712  T
Q  179 ggaatcatgtaaattaacaaatcaagacatcacgtgaaggatca 222  Q
    | |||| |||||||| || |||||||||||||| |||| |||||    
T  24584711 gaaatcttgtaaattgac-aatcaagacatcacatgaaagatca 24584669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 71 - 299
Target Start/End: Complemental strand, 6888284 - 6888059
Alignment:
Q  71 ttgtcaatgttt-gaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgttt 169  Q
    ||||||||| || ||| ||||| ||||||| |||||| |  |||| |||||||| |||| || |||| ||||||||||||||  |||||||| |||  ||    
T  6888284 ttgtcaatggttagagaaacattttgtatt-ttttcatttgagtcattgtaattcagttctatcctaaatcatgcaactcca--ggtgttttgagtcatt 6888188  T
Q  170 ttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatc--aagaattgaagatcaagggttcttagaaggtcgttgaag 267  Q
    ||  || ||| |||||||||||| |||||| |||  ||||||||| || ||| | |||   |||| ||||||||||| |||||||| || ||| ||||||    
T  6888187 tt--agtgagaaatcatgtaaatcaacaaaacaaaccatcacgtgcagtatcgaggatatgaaga-ttgaagatcaatggttcttaaaatgtctttgaag 6888091  T
Q  268 acaatacaaagtgaagaaaattcatttcaagt 299  Q
    |||||||||  |||||||||| | ||||||||    
T  6888090 acaatacaagttgaagaaaatccgtttcaagt 6888059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 11310339 - 11310223
Alignment:
Q  31 tctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttt 129  Q
    |||||||||||||||| ||||||| |||||  || |  ||||||||||| ||| || |||||||| | |||||||||||| ||| ||| ||||| | |||    
T  11310339 tctttgcatttgaagaaaaataagttgagagatagaaaaattgtcaatggtttaagaaacatatttttttgttttcactcaagttgttataattcatttt 11310240  T
Q  130 tagcctagatcatgcaa 146  Q
    || ||||||||||||||    
T  11310239 tatcctagatcatgcaa 11310223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 13583505 - 13583398
Alignment:
Q  181 aatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaaga--attgaagatcaagggttcttagaaggtcgttgaagacaatacaaag 278  Q
    ||||||||||||  ||||| |||||||||| |||||||||| | ||| | ||  ||||||| |||| |||||||||||| |  |||||||||||||||||    
T  13583505 aatcatgtaaatcgacaaaacaagacatcaagtgaaggatcgaggat-atgatgattgaagttcaatggttcttagaagatatttgaagacaatacaaag 13583407  T
Q  279 tgaagaaaa 287  Q
    |||| ||||    
T  13583406 tgaaaaaaa 13583398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 487 - 547
Target Start/End: Complemental strand, 13081662 - 13081602
Alignment:
Q  487 cttgttttccaagctggatcgacggataaagcccaattttcttctcttaatccctaagtaa 547  Q
    ||||||||||||| ||  ||| |||||||||||||| |||||||||||||||| |||||||    
T  13081662 cttgttttccaagatgattcggcggataaagcccaaatttcttctcttaatccataagtaa 13081602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 285
Target Start/End: Complemental strand, 28859237 - 28859119
Alignment:
Q  168 ttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagat--caagaattgaagatcaagggttcttagaaggtcgttga 265  Q
    ||||||||  || ||||||||||||  ||||| | | ||||||| ||||||||||| |||  ||||| || |||||||| |||||||||| |||  ||||    
T  28859237 ttttgtagtaagaaatcatgtaaatggacaaacctaaacatcacatgaaggatcaaggatatcaaga-ttaaagatcaatggttcttagatggtttttga 28859139  T
Q  266 agacaatacaaagtgaagaa 285  Q
    |||||||| |||||||||||    
T  28859138 agacaataaaaagtgaagaa 28859119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 480 - 547
Target Start/End: Original strand, 26882669 - 26882736
Alignment:
Q  480 cttttttcttgttttccaagctggatcgacggataaagcccaattttcttctcttaatccctaagtaa 547  Q
    |||||| ||||||||| || ||||||||  ||||||||||  |||||||||||||||| |||||||||    
T  26882669 ctttttgcttgttttctaaactggatcggaggataaagcctgattttcttctcttaattcctaagtaa 26882736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 93 - 223
Target Start/End: Original strand, 28074557 - 28074684
Alignment:
Q  93 ttgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaat 192  Q
    |||||||||||||| |  |||||||| |||| | ||||| |||| |||||||||||||| ||||||||  ||| ||||  ||| ||| ||||||||||||    
T  28074557 ttgtattgttttcattg-agtcgttgcaattcacttttatcctaaatcatgcaactccataggtgtttcgagtctttt--tagtgagaaatcatgtaaat 28074653  T
Q  193 taacaaatcaagacatcacgtgaaggatcaa 223  Q
       |||| ||||||||||  |||||||||||    
T  28074654 atgcaaaacaagacatcaaatgaaggatcaa 28074684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 13530241 - 13530147
Alignment:
Q  30 ttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatt 123  Q
    ||||||||| |||||||||||||||| |  ||||| ||||  |||| ||| |||||||||||| |||||||||||||| || |||| ||| ||||    
T  13530241 ttctttgcaattgaagacaaataagaggtcatttagaggagatgtcgatggtttgaggaacattttgtattgttttcattcaagtctttgaaatt 13530147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 13619780 - 13619686
Alignment:
Q  30 ttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatt 123  Q
    ||||||||| |||||||||||||||| |  ||||| ||||  |||| ||| |||||||||||| |||||||||||||| || |||| ||| ||||    
T  13619780 ttctttgcaattgaagacaaataagaggtcatttagaggagatgtcgatggtttgaggaacattttgtattgttttcattcaagtctttgaaatt 13619686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 487 - 547
Target Start/End: Complemental strand, 29047007 - 29046946
Alignment:
Q  487 cttgttttccaagctggatcgacggataaa-gcccaattttcttctcttaatccctaagtaa 547  Q
    |||||||| |||||||||||||| |||||| ||| | |||||||||||||| ||||||||||    
T  29047007 cttgtttttcaagctggatcgacagataaaagcctagttttcttctcttaacccctaagtaa 29046946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 6358675 - 6358767
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgt 119  Q
    |||| |||||||||||||||| ||||| |||||  || |||| |||| ||| ||||| | |||||||||||||||||||| || || ||||||    
T  6358675 ttttatttgcatttgaagacatataagttgagagatagaggagttgttaatggtttgggaaacatattgtattgttttcaatcgagccgttgt 6358767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 549
Target Start/End: Original strand, 24120692 - 24120731
Alignment:
Q  510 ggataaagcccaattttcttctcttaatccctaagtaatc 549  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  24120692 ggataaagcccaattttcttctcttaaacactaagtaatc 24120731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 547
Target Start/End: Original strand, 28902523 - 28902588
Alignment:
Q  482 tttttcttgttttccaagctggatcgacggataaagcccaattttcttctcttaatccctaagtaa 547  Q
    |||| ||||||||||||| ||||||   | |||||||| | |||||||||||||| ||||||||||    
T  28902523 ttttgcttgttttccaagttggatcagtgcataaagcctagttttcttctcttaaaccctaagtaa 28902588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 12956665 - 12956733
Alignment:
Q  235 tgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaaga-aaattcatttcaagttcc 302  Q
    ||||||||||  ||| || ||||||  || |||| ||||||||||||||| ||||||||||||||||||    
T  12956665 tgaagatcaattgtttttggaaggttttttaagataatacaaagtgaagagaaattcatttcaagttcc 12956733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 14977092 - 14977052
Alignment:
Q  183 tcatgtaaattaacaaatcaagacatcacgtgaaggatcaa 223  Q
    ||||||||||| ||||||||||||||||| |||| ||||||    
T  14977092 tcatgtaaattgacaaatcaagacatcacatgaaagatcaa 14977052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 31436681 - 31436720
Alignment:
Q  262 ttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  31436681 ttgaagacaatacaaagtgaaaaaaatt-atttcaagttcc 31436720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 163; Significance: 1e-86; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 21 - 334
Target Start/End: Original strand, 25883073 - 25883386
Alignment:
Q  21 tagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatgttt-gaggaacatattgtattgttttcactctagtcgttgt 119  Q
    |||||||||||| ||||||||||||| ||||||||||||| | | | || |||||||| ||| |||||||||||| |||||||||||||| | |||||||    
T  25883073 tagtactttttcattgcatttgaagaaaaataagatgagagtcagaagagttgtcaattttttgaggaacatattatattgttttcactcgaatcgttgt 25883172  T
Q  120 aatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagga 219  Q
    |||| ||||||| ||||||| |||||||| || ||||||||| ||||||||  ||| ||||||||||||| || | ||||||||||||||  || |||||    
T  25883173 aattcagttttatcctagattatgcaactacataggtgttttgagtgtttta-tagtgaggaatcatgtacatcatcaaatcaagacatcttgttaagga 25883271  T
Q  220 tcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccg 319  Q
    |||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||      
T  25883272 tcaaggatgaagaattgaagatcaagggttcttagaaggttgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacga 25883371  T
Q  320 aagaaagatcgaaaa 334  Q
    |||||  ||||||||    
T  25883372 aagaacaatcgaaaa 25883386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 20 - 317
Target Start/End: Complemental strand, 1475426 - 1475128
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    |||||||||||||||||||||||||| | |||||||||||| ||| |||| || |||||| ||||||||| |||||||||| ||||||||| ||||||||    
T  1475426 ttagtactttttctttgcatttgaagtctaataagatgagagttagaggagttttcaatggtttgaggaatatattgtattattttcactcgagtcgttg 1475327  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgt-tttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaag 217  Q
    ||||| | || || |||||||||||||||||||  ||| | ||| |||||||  |||| || |||| |||||||| | ||||||||||||||| ||||||    
T  1475326 taattcaattatatcctagatcatgcaactccatgggtatatttgagtgtttc-gtagtgaagaataatgtaaatcatcaaatcaagacatcatgtgaag 1475228  T
Q  218 gatcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagac 317  Q
    |||||| ||| |||| |||||||||||| |||||||||||||  ||||||| |||||||||||||||||||| |||||||||||||||||| ||| ||||    
T  1475227 gatcaaggatgaagagttgaagatcaagagttcttagaaggttattgaagataatacaaagtgaagaaaatttatttcaagttcctaggagttttcagac 1475128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 12573259 - 12573540
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||| | || ||||||||| |||||||||    ||||||||||||||||| || |||||    
T  12573259 ttagtactttttctttgcattagaagacaaataagatgagagttagatgatttgtcaatggtttgaggaatgctttgtattgttttcactcgagacgttg 12573358  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 218  Q
    ||||| | ||||| ||||||||||||| ||||  |||| |||| |||||||| |||| |||||||||||||||| ||||||| ||||||| |||||||||    
T  12573359 taattcatttttatcctagatcatgcagctccgtaggtttttttagtgtttt-gtagtgaggaatcatgtaaatcaacaaatgaagacattacgtgaagg 12573457  T
Q  219 atcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttc 301  Q
    ||||   || |||||||||||||||||| || ||||||||| ||||||||||||||| ||||||||||||| |||||||||||    
T  12573458 atcaccaatgaagaattgaagatcaaggtttgttagaaggttgttgaagacaatacacagtgaagaaaatttatttcaagttc 12573540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 13549723 - 13550004
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||| | || ||||||||| |||||||||    ||||||||||||||||| || |||||    
T  13549723 ttagtactttttctttgcattagaagacaaataagatgagagttagatgatttgtcaatggtttgaggaatgctttgtattgttttcactcgagacgttg 13549822  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 218  Q
    ||||| | ||||| ||||||||||||| ||||  |||| |||| |||||||| |||| |||||||||||||||| ||||||| ||||||| |||||||||    
T  13549823 taattcatttttatcctagatcatgcagctccgtaggtttttttagtgtttt-gtagtgaggaatcatgtaaatcaacaaatgaagacattacgtgaagg 13549921  T
Q  219 atcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttc 301  Q
    ||||   || |||||||||||||||||| || ||||||||| ||||||||||||||| ||||||||||||| |||||||||||    
T  13549922 atcaccaatgaagaattgaagatcaaggtttgttagaaggttgttgaagacaatacacagtgaagaaaatttatttcaagttc 13550004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 27 - 302
Target Start/End: Complemental strand, 19219350 - 19219074
Alignment:
Q  27 tttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgtaattta 125  Q
    ||||||||||| |||||||| ||||||||||||| |||| ||| |||||||| ||||||||| |||||| ||||  |||||||  ||||||||||||| |    
T  19219350 tttttctttgcttttgaagataaataagatgagagttattggagttgtcaatggtttgaggagcatattttattactttcactagagtcgttgtaattca 19219251  T
Q  126 gttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa-- 223  Q
     ||||| || | |||||||||| ||| |  |||||| |||| |||||||| ||||||||||||||||   |||| ||||||||||| |||||||||||      
T  19219250 cttttatccaaaatcatgcaacaccataaatgttttgagtg-ttttgtagtgaggaatcatgtaaatcttcaaaccaagacatcacatgaaggatcaagg 19219152  T
Q  224 agatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    | || ||| |||||||||||| ||||||||||||||  ||||||||||||||||||||| |||||||||||||| ||||    
T  19219151 atatgaag-attgaagatcaatggttcttagaaggtttttgaagacaatacaaagtgaataaaattcatttcaaattcc 19219074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 27 - 307
Target Start/End: Original strand, 21017853 - 21018133
Alignment:
Q  27 tttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaattta 125  Q
    |||||||||||||||||||| ||||||||||||| ||| |||| ||| ||||  ||||||||||||||| |||| ||||||  | ||||||||||||| |    
T  21017853 tttttctttgcatttgaagaaaaataagatgagagttagaggagttggcaataatttgaggaacatattatattattttcaaccgagtcgttgtaattca 21017952  T
Q  126 gttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaag 225  Q
    |||||| ||||||||||||||||| | | ||||||| |||| |||||||  ||| |||||||||| | ||||||||||||||| |||||||||||||| |    
T  21017953 gttttatcctagatcatgcaactctaaatgtgttttgagtg-ttttgtattgagaaatcatgtaattcaacaaatcaagacattacgtgaaggatcaatg 21018051  T
Q  226 atcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctagga 307  Q
    ||    ||||||||| ||| ||||  || ||  |  ||||||| |||||||| ||||| |||||||||||||||||||||||    
T  21018052 atatgaaattgaagaccaatggtttctataacttttttgaagataatacaaaatgaaggaaattcatttcaagttcctagga 21018133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 28 - 335
Target Start/End: Original strand, 10341773 - 10342071
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatgtttgaggaacatattgtattgttttcactctagtcgttgtaatttagt 127  Q
    |||||| ||||||||||  ||||||||||| || ||| |||| ||||||||| |||||||||| |||||||||||||||||  ||||||||||||| | |    
T  10341773 ttttctctgcatttgaaatcaaataagatgtgaattagaggagttgtcaatggttgaggaacaaattgtattgttttcactaaagtcgttgtaattcact 10341872  T
Q  128 tttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagat 227  Q
    ||||  | | |||||||||||||| |||||||||          || | ||| |||||||||||| |||||||| | |||||| ||||||||| || |||    
T  10341873 tttattcaaaatcatgcaactccataggtgtttt----------gttgtgagaaatcatgtaaatcaacaaatccaaacatcaagtgaaggattaaggat 10341962  T
Q  228 caaga-attgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaag 326  Q
      | | |||||||||||  ||||||||||||||  ||||||||||||||||||||  |||| |||||||||||||||||||| || ||||| |||||| |    
T  10341963 agaaagattgaagatcagtggttcttagaaggtttttgaagacaatacaaagtgagaaaaactcatttcaagttcctaggagtttctagacggaagaacg 10342062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 32 - 302
Target Start/End: Complemental strand, 8402684 - 8402414
Alignment:
Q  32 ctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagtttt 130  Q
    |||||||||||||| |||||||||||  ||||| |||| ||||||||| |||||||||||  |||||||||||||| || ||||||||||||| | ||||    
T  8402684 ctttgcatttgaaggcaaataagatgtaatttagaggagttgtcaatggtttgaggaacaatttgtattgttttcattcgagtcgttgtaattcattttt 8402585  T
Q  131 agcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--agatc 228  Q
    | | || |||||||||||||| ||||||||| ||| |||   |||||||||||| |||||||  | | |||||||||||| |||||||||| |  | ||     
T  8402584 atcttaaatcatgcaactccataggtgttttgagtcttt---tagcgaggaatcgtgtaaatcgatagatcaagacatcaagtgaaggatcgaggatatg 8402488  T
Q  229 aagaattgaagatcaagggttcttag-aaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    ||| |||||||| | | ||||||| | |||||  ||||||| |||| ||||||||||| ||||||||||||||||    
T  8402487 aag-attgaagaactatggttcttcgaaaggtatttgaagaaaatataaagtgaagaacattcatttcaagttcc 8402414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 24 - 249
Target Start/End: Original strand, 11521113 - 11521337
Alignment:
Q  24 tactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgtaat 122  Q
    ||||||||| ||||||||||||| ||||||||||||  ||  |||| |||||||| ||||||||||||||||||||| |||| |||  | | | ||||||    
T  11521113 tactttttcattgcatttgaagaaaaataagatgagcgttggaggagttgtcaatggtttgaggaacatattgtattatttttacttgatttg-tgtaat 11521211  T
Q  123 ttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatca 222  Q
    | ||||||| |||||||||||||| |||| || |||||| |||| |||||||| |||||||||||||||| |||||||||| |||| ||||| |||||||    
T  11521212 tcagttttatcctagatcatgcaagtccatagttgttttgagtg-ttttgtagtgaggaatcatgtaaatcaacaaatcaaaacattacgtggaggatca 11521310  T
Q  223 aagatcaagaattgaagatcaagggtt 249  Q
    |  || |||| | || |||||||||||    
T  11521311 acaatgaagagtagaggatcaagggtt 11521337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 28 - 223
Target Start/End: Complemental strand, 33914700 - 33914510
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaa-tgtttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||||||||| |||||||||||||||||| |||||||| |||||||  |||||||||||||||||||||||||| |||| ||||||||||||| |     
T  33914700 ttttctttgcatttcaagacaaataagatgagagttataggagttgtcaacggtttgaggaacatattgtattgtttttactcgagtcgttgtaattca- 33914602  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa 223  Q
      ||| || | |||||||||||| |    |||||| |||| |||||||| ||| ||||||||||||  || ||||||||||||||||||||||||||    
T  33914601 cgttatcccaaatcatgcaactcta----tgttttgagtg-ttttgtagtgagaaatcatgtaaatcgacgaatcaagacatcacgtgaaggatcaa 33914510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 79 - 335
Target Start/End: Original strand, 27415200 - 27415451
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcga 178  Q
    |||| |||||||||||||||||||||||||| ||||||   |||| | ||||| | || ||||||||||| || ||||||||| |||||||| ||||  |    
T  27415200 gtttaaggaacatattgtattgttttcactcgagtcgt---aattcacttttatcgtaaatcatgcaacttcataggtgttttgagtgtttt-gtagtaa 27415295  T
Q  179 ggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaag 278  Q
    | ||||||||||||  || |||||||||||||| | ||||||||| ||| | |||||||||| ||   |||||||||| ||  ||| ||||| || ||||    
T  27415296 gaaatcatgtaaatagaccaatcaagacatcacataaaggatcaaggataaggaattgaagaccattagttcttagaatgtttttggagaca-taaaaag 27415394  T
Q  279 tgaagaaaattcatttcaagttcctaggagattttagaccgaagaaagatcgaaaac 335  Q
    ||||||||||||||||||| |||||||||| ||  ||||  ||||| ||||||||||    
T  27415395 tgaagaaaattcatttcaacttcctaggagtttcaagacgaaagaacgatcgaaaac 27415451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 236 - 355
Target Start/End: Original strand, 11521350 - 11521469
Alignment:
Q  236 gaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaagatcgaaaac 335  Q
    |||||||||||||| ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| ||| |||| |||||| ||||||||||    
T  11521350 gaagatcaagggttgttagaaggttgttgaagataatacaaagcgaagaaaattcatttcaagttcctaggagttttcagacggaagaacgatcgaaaac 11521449  T
Q  336 tggatgaaaatgtaagaaat 355  Q
     ||| ||||| | |||||||    
T  11521450 gggaagaaaacgcaagaaat 11521469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 51 - 334
Target Start/End: Complemental strand, 2729733 - 2729454
Alignment:
Q  51 taagatgagatttataggaattgtcaatgtttga-ggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactc 149  Q
    |||||||||| |||||||| ||||||||| || | |||||||||| |||||||||||||| |||| |||||||| | ||||| |||| | |||||||||     
T  2729733 taagatgagaattataggagttgtcaatggttcaaggaacatattatattgttttcactcgagtccttgtaattcatttttatcctaaaccatgcaactt 2729634  T
Q  150 cacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaagaattgaagatcaagggtt 249  Q
    || | ||||||| |||| |||||||| ||  |||| |||||||  | |||| |||||||||||| ||||||     || ||  |||||||||||| |  |    
T  2729633 catatgtgttttgagtg-ttttgtagtgataaatcttgtaaatcgaaaaattaagacatcacgtcaaggat-----atgaa-tattgaagatcaacgact 2729541  T
Q  250 cttagaagg--tcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaagatcgaaaa 334  Q
    |||| ||||  |  || |||||||||||||||||| |||| ||||||||||||| ||||||| ||||||   ||||| |||||||||    
T  2729540 cttaaaaggttttttttaagacaatacaaagtgaataaaaatcatttcaagttcgtaggagaatttagatgcaagaacgatcgaaaa 2729454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 79 - 287
Target Start/End: Original strand, 11474875 - 11475083
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcga 178  Q
    ||||||||||| | ||||||| |||||| || | ||||||||||| | ||||| |||| ||||||||||| || | ||||||| ||| ||||| ||| ||    
T  11474875 gtttgaggaactttttgtattattttcattcgactcgttgtaattcaattttatcctaaatcatgcaacttcatatgtgttttgagtcttttt-tagtga 11474973  T
Q  179 ggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagat-caagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaa 277  Q
    | ||||||||||||   |||| ||||||||||| ||||||||| |||||   || ||| ||||| || |||||||||||| |  ||||||||||||||||    
T  11474974 gaaatcatgtaaatcggcaaaacaagacatcacatgaaggatcgaagatatgaggattcaagataaatggttcttagaagatatttgaagacaatacaaa 11475073  T
Q  278 gtgaagaaaa 287  Q
    ||||| ||||    
T  11475074 gtgaaaaaaa 11475083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 168 - 345
Target Start/End: Original strand, 18065913 - 18066091
Alignment:
Q  168 ttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaagaattgaagatcaagggttcttagaaggtcgtt-gaa 266  Q
    ||||||||  || ||||||||||||  ||||||||||||||||| | ||||||||| ||  | ||||| |||| ||| ||||||||||| ||  || |||    
T  18065913 ttttgtagtaagaaatcatgtaaatagacaaatcaagacatcacataaaggatcaatgacaaggaattaaagaccaatggttcttagaaagttttttgaa 18066012  T
Q  267 gacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaagatcgaaaactggatgaaaa 345  Q
    || |||||||||||||||||||||||||||| |||||||||| ||  | ||| ||||| | |||| ||| |||||||||    
T  18066013 gaaaatacaaagtgaagaaaattcatttcaacttcctaggagtttccaaaccaaagaacgctcgagaacgggatgaaaa 18066091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 39 - 302
Target Start/End: Original strand, 18474159 - 18474421
Alignment:
Q  39 tttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctag 137  Q
    ||||||||||||| ||| |  | ||| |||| || ||||| |||||||||||  |||||||||||| || || | || |||||||| | | ||| ||||     
T  18474159 tttgaagacaaattagaagtcaattagaggatttatcaatcgtttgaggaactgattgtattgttt-cattcgattcattgtaattcactgttatcctaa 18474257  T
Q  138 atcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaaga-attg 236  Q
    |||||||||||||| ||||||||| ||| ||||   || ||| ||||||||||||    ||  |||||||| || ||||||||| |||||  | | ||||    
T  18474258 atcatgcaactccataggtgttttgagtcttttc--agtgagaaatcatgtaaatcgggaacacaagacattacatgaaggatcgaagatgtaaagattg 18474355  T
Q  237 aagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    ||  |||| ||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  18474356 aatttcaatggtacttagaaggtatttgaagacaatacaaagtgaagaaaattcatttcaagttcc 18474421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 28 - 192
Target Start/End: Original strand, 13911242 - 13911406
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||| |||||||||||| ||||  ||||  || | || ||||||||| |||||||||||||| ||||||||||||||  | || |||||||| |     
T  13911242 ttttctttgtatttgaagacaagtaagtagagagatagaagagttgtcaatggtttgaggaacatatggtattgttttcacttgaatcattgtaattcac 13911341  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaat 192  Q
    ||||| |||||||||||||||| || | ||||||| |||| |||||||| ||| ||||||||||||    
T  13911342 ttttatcctagatcatgcaacttcatatgtgtttttagtg-ttttgtagtgagaaatcatgtaaat 13911406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 29 - 292
Target Start/End: Complemental strand, 25919601 - 25919345
Alignment:
Q  29 tttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaac--atattgtattgttttcactctagtcgttgtaattta 125  Q
    |||||||| ||||||||||||||||||||||| ||| | || |||||||| |||||||||||  ||||||| ||||||| |||  |||| | |||||| |    
T  25919601 tttctttgaatttgaagacaaataagatgagagttagatgatttgtcaatggtttgaggaacatatattgtgttgtttttacttgagtcatcgtaattca 25919502  T
Q  126 gttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa-- 223  Q
     ||||| |||| |||||||||||||| || ||          |||||||| ||||||||||||||||  ||||| ||||| ||||| |||||||||||      
T  25919501 cttttatcctaaatcatgcaactccatagatg----------ttttgtagtgaggaatcatgtaaatcgacaaaccaagatatcacatgaaggatcaagg 25919412  T
Q  224 agatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcat 292  Q
    | || ||| |||||||||||| | || |||||| ||  ||||||| ||| |||||||| ||||||||||    
T  25919411 atatgaag-attgaagatcaacgatttttagaa-gtttttgaagataatgcaaagtgacgaaaattcat 25919345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 28 - 302
Target Start/End: Complemental strand, 21829270 - 21828996
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||| |||||||||||||  |||||||| |  ||||| |||| ||||||||| |||||||||||| ||||||| |||||| |  ||||||||||||| ||    
T  21829270 ttttatttgcatttgaaggaaaataagaggtcatttagaggagttgtcaatggtttgaggaacattttgtattattttcatttgagtcgttgtaattcag 21829171  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--a 224  Q
    ||||| |||| ||||| ||||| || | | |||||  | || ||  ||| ||| |||| |||||||   | || ||||||||||| ||||| |||||  |    
T  21829170 ttttatcctaaatcatacaacttcatatgagtttt--gggtcttgttagtgagaaatcttgtaaatcgtcgaaacaagacatcacatgaagtatcaagga 21829073  T
Q  225 gatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
     || ||| |||||||||||| ||||| | ||||||| |||||||||||| ||  | ||||| |||||||| |||||||    
T  21829072 tatgaag-attgaagatcaatggttcatcgaaggtctttgaagacaatataagttaaagaatattcattttaagttcc 21828996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 179 - 345
Target Start/End: Original strand, 16970589 - 16970755
Alignment:
Q  179 ggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaagaa--ttgaagatcaagggttcttagaaggtcgttgaagacaatacaa 276  Q
    ||||||||||||||  |||||||||||||||| |||||||||||| ||| | |||  ||||||| ||| ||||||||||||||  ||||||| |||||||    
T  16970589 ggaatcatgtaaatcgacaaatcaagacatcatgtgaaggatcaaggat-atgaagtttgaagaccaacggttcttagaaggtttttgaagaaaatacaa 16970687  T
Q  277 agtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaagatcgaaaactggatgaaaa 345  Q
      ||||||||||| | || |||||||||| || ||  ||||  ||||| |||||||||| ||| |||||    
T  16970688 gatgaagaaaattta-ttgaagttcctagcagtttccagacaaaagaacgatcgaaaacgggacgaaaa 16970755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 247 - 302
Target Start/End: Complemental strand, 19543042 - 19542987
Alignment:
Q  247 gttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  19543042 gttcttagaaggtatttgaagacaatacaaagtgaagaaaattcatttcaagttcc 19542987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 481 - 587
Target Start/End: Original strand, 11521584 - 11521696
Alignment:
Q  481 ttttttcttgttttccaagctggatcgacggataaagcccaattttcttctcttaatccctaagtaatctcat--tataa----agacccttgcacacta 574  Q
    ||||| |||||||||||||||||| || || |||||||| | ||||||||||||||||||| ||||| || ||  |||||    ||||||||||||||||    
T  11521584 tttttgcttgttttccaagctggaccggcgaataaagcctagttttcttctcttaatccctcagtaacctaatgctataaatagagacccttgcacacta 11521683  T
Q  575 ttttatacattca 587  Q
    |||||| ||||||    
T  11521684 ttttattcattca 11521696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 168 - 300
Target Start/End: Complemental strand, 19263905 - 19263769
Alignment:
Q  168 ttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatc--aagaattgaagatcaagggttcttagaaggtcgttg- 264  Q
    ||||||||  |||||||||| ||||   ||||||||| |||||| ||||||||||| |||   |||| ||||||||||| ||||| ||||||||  ||      
T  19263905 ttttgtagtaaggaatcatggaaatcgtcaaatcaagtcatcacatgaaggatcaaggatatgaaga-ttgaagatcaatggttcatagaaggttttttt 19263807  T
Q  265 --aagacaatacaaagtgaagaaaattcatttcaagtt 300  Q
      ||||||||||||||||||||||||||||||||||||    
T  19263806 ttaagacaatacaaagtgaagaaaattcatttcaagtt 19263769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 33 - 227
Target Start/End: Complemental strand, 26387977 - 26387784
Alignment:
Q  33 tttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagtttta 131  Q
    ||||||||||||| ||||| ||| |  | ||| || | ||||||||| |||||| ||| | ||||||| |||||| |   ||||| |||||| |||||||    
T  26387977 tttgcatttgaaggcaaattagaagtaaattagagtagttgtcaatggtttgagaaacgttttgtattcttttcatttgtgtcgtagtaattaagtttta 26387878  T
Q  132 gcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagat 227  Q
     |||| |||||||||||||| || |||||| ||| ||||  ||  ||| |||||||||||| | | || |||||||||| ||||||||||||||||    
T  26387877 tcctaaatcatgcaactccatagatgttttgagtctttt--taatgagaaatcatgtaaatcagctaaacaagacatcaagtgaaggatcaaagat 26387784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 298
Target Start/End: Complemental strand, 30493349 - 30493132
Alignment:
Q  80 tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgag 179  Q
    |||||| ||| | |||||||||||||| || |||||||||| |||||||||| |||| ||||||||| ||||  |||||||| ||| ||||  ||| |||    
T  30493349 tttgagaaactttttgtattgttttcattcgagtcgttgtagtttagttttatcctaaatcatgcaaatccatgggtgttttgagtctttt--tagtgag 30493252  T
Q  180 -gaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaag--atcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaa 276  Q
      |||||||||||| | |||| | |||||  | |||||||||| |||  || ||| ||| ||||| || ||||||||||||    |||||||| ||| ||    
T  30493251 aaaatcatgtaaataagcaaaac-agacacaaagtgaaggatcgaagatatgaag-attaaagattaacggttcttagaagacatttgaagacgatataa 30493154  T
Q  277 agtgaagaaaattcatttcaag 298  Q
    ||||||||||||||||| ||||    
T  30493153 agtgaagaaaattcattgcaag 30493132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 4775846 - 4775724
Alignment:
Q  27 tttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaattta 125  Q
    ||||||||||||||||||||||||| |||| |||| || ||||  | | | || |||| |||||||||| ||||||||||||   ||||||||||||| |    
T  4775846 tttttctttgcatttgaagacaaatgagataagatatagaggagctcttattggtttgtggaacatattttattgttttcacctgagtcgttgtaattca 4775747  T
Q  126 gttttagcctagatcatgcaact 148  Q
     | ||| ||||||||||||||||    
T  4775746 ctcttatcctagatcatgcaact 4775724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 220
Target Start/End: Original strand, 28422481 - 28422621
Alignment:
Q  78 tgtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcg 177  Q
    |||||||||||  | |||||||||||||| || | || |||||||| | ||||| | || |||||||||||| |  |||||||| | |||||| |||| |    
T  28422481 tgtttgaggaattttttgtattgttttcattcgaatcattgtaattcacttttatc-taaatcatgcaactcaattggtgttttgaatgtttt-gtagtg 28422578  T
Q  178 aggaatcatgtaaattaacaaatcaagacatcacgtgaaggat 220  Q
    || ||||||||| ||  ||||||||| ||||||||||||||||    
T  28422579 agaaatcatgtagatcgacaaatcaatacatcacgtgaaggat 28422621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 148
Target Start/End: Original strand, 12409478 - 12409556
Alignment:
Q  71 ttgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaact 148  Q
    ||||||||| ||||| |||||||||||||| ||||||||  ||||||||||||| | ||||| | | ||||||||||||    
T  12409478 ttgtcaatggtttgaagaacatattgtattattttcacttgagtcgttgtaattcatttttatcttggatcatgcaact 12409556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 23007160 - 23007062
Alignment:
Q  71 ttgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtt 168  Q
    ||||||||| ||||||||| |||||||||||||||| ||| |||| || ||| | | ||||| |||| ||||| |||||||| || |||||| ||||||    
T  23007160 ttgtcaatgatttgaggaatatattgtattgttttccctcgagtcattataaatcacttttatcctaaatcatacaactccatagatgttttgagtgtt 23007062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 5632474 - 5632406
Alignment:
Q  233 attgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    |||||||| ||| |||||||| |||||  ||||||| |||| ||| ||||||||||||||||||||||||    
T  5632474 attgaaga-caacggttcttataaggtatttgaagataataaaaattgaagaaaattcatttcaagttcc 5632406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 25188734 - 25188786
Alignment:
Q  27 tttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg 79  Q
    ||||||||||||||||||||||||||||| |  ||||| |||||||| |||||    
T  25188734 tttttctttgcatttgaagacaaataagaggtcatttagaggaattgacaatg 25188786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 26797311 - 26797192
Alignment:
Q  101 ttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaat 200  Q
    |||||| || ||||||| |||||  |||||| |||| ||||||||||| || |||||||| |   || ||| ||| |||  |||||||||||  |||||     
T  26797311 ttttcattcgagtcgttataattctgttttatcctaaatcatgcaacttcataggtgtttga---gtctttttagagagatatcatgtaaatcgacaaaa 26797215  T
Q  201 caagacatcacgtgaaggatcaa 223  Q
    |||||||||| ||||||||||||    
T  26797214 caagacatcaagtgaaggatcaa 26797192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 18065836 - 18065882
Alignment:
Q  71 ttgtcaatg-tttgaggaacatattgtattgttttcactctagtcgt 116  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||||    
T  18065836 ttgtcaatggtttgagaaacatattgtattgttttcactcgagtcgt 18065882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 26297778 - 26297847
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaact 148  Q
    ||||||| ||| | || ||||||||||| || ||||||||||||| | ||||| |||| |||||||||||    
T  26297778 gtttgagaaactttttatattgttttcattcgagtcgttgtaattcaattttatcctaaatcatgcaact 26297847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 66 - 141
Target Start/End: Complemental strand, 19263998 - 19263922
Alignment:
Q  66 aggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatca 141  Q
    |||| ||||||||| |||||||| |||||| ||||||| |||||  ||||||||||||| | ||||| |||| ||||    
T  19263998 aggagttgtcaatggtttgaggatcatattatattgttgtcactagagtcgttgtaattcacttttatcctaaatca 19263922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 162; Significance: 4e-86; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 27 - 308
Target Start/End: Complemental strand, 16593891 - 16593608
Alignment:
Q  27 tttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaaca--tattgtattgttttcactctagtcgttgtaatt 123  Q
    ||||| |||||||||||||||||||||||| ||| |||||||| ||||||||| ||||| |||||  |||| |||||||||||||| ||| ||| |||||    
T  16593891 tttttttttgcatttgaagacaaataagattagagttataggagttgtcaatggtttgatgaacacatattatattgttttcactcgagttgttttaatt 16593792  T
Q  124 tagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa 223  Q
     ||||||| ||||||||||||||||||| ||||||| | |||||||| |||| || ||||||||||||| | |||||||||||||||  |||||||||||    
T  16593791 cagttttatcctagatcatgcaactccataggtgttctgagtgtttt-gtagtgaagaatcatgtaaatcatcaaatcaagacatcatttgaaggatcaa 16593693  T
Q  224 agatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
     ||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16593692 cgatgaagaaatgaagatcaagggttcttagaaggttgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggag 16593608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 30 - 393
Target Start/End: Original strand, 30998750 - 30999113
Alignment:
Q  30 ttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagtt 128  Q
    |||||||| |||||||||||||||||||||| ||| | || ||||||||| |||||||||||||||||||||||||||||  |||||||||| || ||||    
T  30998750 ttctttgcctttgaagacaaataagatgagagttagatgagttgtcaatggtttgaggaacatattgtattgttttcacttgagtcgttgtacttcagtt 30998849  T
Q  129 ttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatc 228  Q
    ||| |||||||||| |||||||| ||||||||| |||||||| |||| || || | ||||||||  ||||||||||| |||| |||||||||||| |||     
T  30998850 ttatcctagatcatacaactccataggtgttttgagtgtttt-gtagtgaagagtgatgtaaatcgacaaatcaagatatcaagtgaaggatcaaggata 30998948  T
Q  229 aagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaagat 328  Q
       |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||| ||| | || |||||| |||    
T  30998949 tgtaattgaagatcaagggttcttagaaggttgttgaagacaatacaaagtggagaaaattcatttcaagttcatatgagttttcaaacggaagaacgat 30999048  T
Q  329 cgaaaactggatgaaaatgtaagaaatcgcacgtgcggggctgcctcaggtgcccctgtgcctgt 393  Q
    |  |||| | | ||||||| ||||||| |||  || |||||||||||||  ||||||| ||||||    
T  30999049 cagaaacagaacgaaaatgaaagaaattgcatatgaggggctgcctcagacgcccctgcgcctgt 30999113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 20 - 305
Target Start/End: Original strand, 25474006 - 25474291
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    ||||||| |||| ||| |||||||||||||||||||||||| ||| |||| |||||||| ||||||||||||||||| |||| |||||||| || || ||    
T  25474006 ttagtacattttattttcatttgaagacaaataagatgagagttagaggagttgtcaattgtttgaggaacatattgaattggtttcactcaagacgctg 25474105  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 218  Q
    ||||| ||| ||| ||||||||||||||||||| ||||||||| | |||||| |||| |||||||||||||||| | ||||||||||||||| ||||||     
T  25474106 taattcagtattatcctagatcatgcaactccaaaggtgttttgactgtttt-gtagtgaggaatcatgtaaatcatcaaatcaagacatcatgtgaaga 25474204  T
Q  219 atcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctag 305  Q
    ||||| |||  |||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||    
T  25474205 atcaaggatgtagaattgaaggtcaagggttcttagaaggttgttgaagacaatataaagtgaagaaaattcatttcaggttcctag 25474291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 20 - 397
Target Start/End: Original strand, 35707772 - 35708149
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||| || | ||||||||| |||||| ||||| ||||||||||||||||  | | ||||    
T  35707772 ttagtactttttctttgtatttgaagacaaataagatgagagttagagaagttgtcaatggtttgagaaacatgttgtattgttttcacttgatttgttg 35707871  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 218  Q
    ||||| ||||||| |||||||    | ||| || ||||||||| |||||||| |||| |||||||||||||||| |  |||||||||||||| ||||||     
T  35707872 taattcagttttatcctagattgcacgacttcataggtgttttgagtgtttt-gtagtgaggaatcatgtaaatcataaaatcaagacatcatgtgaagt 35707970  T
Q  219 atcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagacc 318  Q
    ||||| ||| |||||||||| ||||||| |||||||||||| ||||||||||||||||| |||| |||||| |||||||||||  ||||| ||| ||||     
T  35707971 atcaaggatgaagaattgaatatcaaggtttcttagaaggttgttgaagacaatacaaaatgaacaaaatttatttcaagttctcaggagttttcagacg 35708070  T
Q  319 gaagaaagatcgaaaactggatgaaaatgtaagaaatcgcacgtgcggggctgcctcaggtgcccctgtgcctgtacca 397  Q
     ||||| |||||||||| ||| |||||   |||||||||||| ||  ||||||||||| |  |||| | ||||||||||    
T  35708071 aaagaacgatcgaaaacaggaagaaaacacaagaaatcgcacctgaagggctgcctcatgcacccccgcgcctgtacca 35708149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 20 - 446
Target Start/End: Original strand, 1733070 - 1733487
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatgt-ttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    |||||||||||| ||| ||||||||||||||| |||||||| ||| |||| |||||||||  ||||| |||| ||||||||||||||| |  ||||||||    
T  1733070 ttagtacttttttttt-catttgaagacaaatgagatgagagttagaggagttgtcaatgagttgagaaacaaattgtattgttttcatttgagtcgttg 1733168  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 218  Q
    ||||| ||||||| |||||| |||| ||||  | |||||||||          |||| |||||||||||||||| | |||| ||||||||||||||||||    
T  1733169 taattcagttttatcctagagcatgaaactatataggtgtttt----------gtagtgaggaatcatgtaaatcatcaaagcaagacatcacgtgaagg 1733258  T
Q  219 atcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagacc 318  Q
    || || ||| ||||| ||||||||||| |||||||||| || |||||||| ||||||||||||| ||||||||||| |  |||||||||| ||| ||||     
T  1733259 attaaggatgaagaaatgaagatcaagagttcttagaatgttgttgaagataatacaaagtgaataaaattcattttagattcctaggagttttcagacg 1733358  T
Q  319 gaagaaagatcgaaaactggatgaaaatgtaagaaatcgcacgtgcggggctgcctcaggtgcccctgtgcctgtaccatgcatccctgctcatgagata 418  Q
    ||||||  ||||||||| ||| | ||||| |||||||| | | || |||||| ||||| | ||||||  |  ||| ||||||| |||||| | || || |    
T  1733359 gaagaacaatcgaaaacaggaggtaaatgcaagaaatctctcctgaggggctacctcatgcgcccctacgtttgtgccatgcacccctgcgcctgggaca 1733458  T
Q  419 tgattccttgct-ccctaggcacccatgc 446  Q
    | |||||||||| ||| |||| |||||||    
T  1733459 taattccttgctgccccaggcccccatgc 1733487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 27 - 304
Target Start/End: Complemental strand, 21505278 - 21505000
Alignment:
Q  27 tttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaattta 125  Q
    |||||||||||||||||||||||||||||||||| ||| || | ||||||||| |||||||| ||||||||||||||||||||| |||| || |||||||    
T  21505278 tttttctttgcatttgaagacaaataagatgagagttagagtagttgtcaatggtttgaggagcatattgtattgttttcactcgagtctttataattta 21505179  T
Q  126 gttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaag 225  Q
     ||||| |||| ||||||||||| |  || |||||| |||| |||||||| ||||||||||||||||  | |||| |||||||||| |||| |||||| |    
T  21505178 cttttatcctaaatcatgcaacttcttagatgttttgagtg-ttttgtagtgaggaatcatgtaaatcgataaattaagacatcacatgaaagatcaagg 21505080  T
Q  226 a--tcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttccta 304  Q
    |  | |||  ||||||| ||| |||||| |||||||  |||||||||||||||  ||||||||||||||||||| ||||||    
T  21505079 atgtgaag-tttgaagaccaatggttctgagaaggtttttgaagacaatacaagttgaagaaaattcatttcaaattccta 21505000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 20 - 289
Target Start/End: Complemental strand, 19949700 - 19949433
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    ||||||||||||||||| ||||||||| |||||| ||||||  |  |||| |||| ||| ||||||||||||||||||||| ||||||||  ||||||||    
T  19949700 ttagtactttttctttgtatttgaagataaataacatgagagattgaggagttgttaatagtttgaggaacatattgtattattttcacttgagtcgttg 19949601  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 218  Q
    |||| ||||||||   ||||| ||| ||||||| ||||||||| |||| ||||||||  |||||||||||| |||| |||||||| |||||| |||||||    
T  19949600 taatatagttttattatagataatgaaactccataggtgttttgagtg-ttttgtagtaaggaatcatgtagattatcaaatcaaaacatcatgtgaagg 19949502  T
Q  219 atcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaatt 289  Q
    ||||| ||| ||||| |  |||||||||||||  | |||||  ||||||||||||||||||||||||||||    
T  19949501 atcaaggatgaagaagtagagatcaagggttc--aaaaggttattgaagacaatacaaagtgaagaaaatt 19949433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 127 - 345
Target Start/End: Complemental strand, 27417301 - 27417083
Alignment:
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaaga 226  Q
    ||||| |||| |||||||||||||| |||||||||||||||||| |||| ||| ||||||||||||  ||||||||||||||||| ||||||||||| ||    
T  27417301 ttttatcctaaatcatgcaactccataggtgttttaagtgtttt-gtagtgagaaatcatgtaaatcgacaaatcaagacatcacatgaaggatcaatga 27417203  T
Q  227 tcaagaat--tgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaa 324  Q
    | | ||||  |||||| ||| |||||| |||||||  ||||| ||||||||||||||||||||||||||||||||||| ||||| ||  |||| ||||||    
T  27417202 t-atgaatgttgaagaccaatggttctaagaaggtttttgaaaacaatacaaagtgaagaaaattcatttcaagttccaaggagtttccagacggaagaa 27417104  T
Q  325 agatcgaaaactggatgaaaa 345  Q
     ||| |||||| ||| |||||    
T  27417103 cgattgaaaacgggacgaaaa 27417083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 50 - 224
Target Start/End: Original strand, 35031701 - 35031875
Alignment:
Q  50 ataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaact 148  Q
    |||||||||||  || |||| |||| |||| |||||||||||||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||| |    
T  35031701 ataagatgagagatagaggagttgttaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaacttacttttatcctagatcatgcaatt 35031800  T
Q  149 ccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaa 224  Q
    ||| ||||||||| |||| ||||||||  ||||||||| |||||  ||||||||||| ||||| ||||||| ||||    
T  35031801 ccataggtgttttgagtg-ttttgtagtcaggaatcatataaatatacaaatcaagatatcacatgaaggagcaaa 35031875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 28 - 301
Target Start/End: Complemental strand, 18236440 - 18236167
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||||||||||||| |||| ||  ||  |||||||| | ||||||||| |||||| ||||  || ||||||||||| || ||| ||| ||||| |     
T  18236440 ttttctttgcatttgaaggcaaagaaattgtaatttatagaagttgtcaatggtttgagaaacaatttatattgttttcattcgagttgttataattcac 18236341  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatca--aa 224  Q
    ||||| | || |||||||||||||| | || |||| ||| |||||  || ||| |||||||||| |   |||| ||||||||||| ||||||||||  ||    
T  18236340 ttttatcttaaatcatgcaactccataagtattttgagtcttttt--agtgagaaatcatgtaactcggcaaaacaagacatcacatgaaggatcacaaa 18236243  T
Q  225 gatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttc 301  Q
     || |||| ||||||  ||| |||||||||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  18236242 tatgaaga-ttgaaggccaatggttcttagaaggttgttgaagacaatacaagatgaagaaaattcatttcaagttc 18236167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 28 - 203
Target Start/End: Complemental strand, 28278561 - 28278386
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||||||||||||| ||||||||| |||| ||| |||| || |||||| ||||| ||||||| |||||| ||||||||  ||||||||||||| |     
T  28278561 ttttctttgcatttgaaggcaaataagaagagagttagaggatttctcaatggtttgaagaacatagtgtattattttcacttgagtcgttgtaattcac 28278462  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaa 203  Q
    ||||| ||||||||||||||||||| || | ||||||||| |||||| |  || || ||||||||| ||||||||||    
T  28278461 ttttatcctagatcatgcaactccatagatattttaagtg-ttttgtggtaagaaagcatgtaaatcaacaaatcaa 28278386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 21843139 - 21843005
Alignment:
Q  29 tttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagt 127  Q
    |||||||||||||||||||||||||| ||  ||||| |||| ||| ||||| ||| |||||||| |||||||||||||| || |||| |||||||||| |    
T  21843139 tttctttgcatttgaagacaaataagttgtaatttagaggagttgccaatggttttaggaacatgttgtattgttttcattcgagtcattgtaatttact 21843040  T
Q  128 tttagcctagatcatgcaactccacaggtgtttta 162  Q
    |||| |||| |||||||||||| | ||||||||||    
T  21843039 tttatcctaaatcatgcaactctataggtgtttta 21843005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 79 - 302
Target Start/End: Original strand, 18818726 - 18818953
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcga 178  Q
    |||| |||||||| || ||||||||||| |  |||||||| |||||||||||| | || ||||||||| |||| ||  ||||| ||| ||||| | | ||    
T  18818726 gtttaaggaacattttatattgttttcatttgagtcgttgaaatttagttttatcataaatcatgcaagtccatagacgttttcagtctttttattgaga 18818825  T
Q  179 ggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatca------agaattgaagatcaagggttcttagaaggtcgttgaagacaat 272  Q
      ||||||||||||   |||| |||| ||||||||||||||| || |||        | || ||||||| || ||||||||||||||| |||||||||||    
T  18818826 --aatcatgtaaatcggcaaaacaaggcatcacgtgaaggattaaggataggatatgaaaactgaagattaatggttcttagaaggtctttgaagacaat 18818923  T
Q  273 acaaagtgaagaaaattcatttcaagttcc 302  Q
    ||||||||||||||||||| ||||||||||    
T  18818924 acaaagtgaagaaaattcaattcaagttcc 18818953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 28 - 306
Target Start/End: Original strand, 19541014 - 19541291
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||||||||||||  |||| |||    || ||||||| |||| |||| |||||||||| | |||||||  ||||| || |||| |||||||| ||    
T  19541014 ttttctttgcatttgaaggaaaattagaatttatatataggagttgttaatggtttgaggaactttttgtatttatttcaatcgagtcattgtaattcag 19541113  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--a 224  Q
    ||||| |||| |||||||||||||| |||||||||  | || ||| ||| ||| ||||||||||||   ||||  ||||||||| |||||||||| |  |    
T  19541114 ttttatcctaaatcatgcaactccataggtgtttt--gagtctttctagtgagaaatcatgtaaatcggcaaaataagacatcaagtgaaggatcgagga 19541211  T
Q  225 gatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctagg 306  Q
     || ||| |||||||| ||| |||||||| |||||  || ||||||||||||||| |||||  |||||||||||||| ||||    
T  19541212 tatgaag-attgaagaccaatggttcttataaggt-attaaagacaatacaaagttaagaatcttcatttcaagttcatagg 19541291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 21844766 - 21844632
Alignment:
Q  29 tttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagt 127  Q
    |||||||||||||||||||||||||| ||  ||||| |||| ||||||||| ||| |||||||| || ||||||||||| || |||| |||||||||| |    
T  21844766 tttctttgcatttgaagacaaataagttgtaatttagaggagttgtcaatggttttaggaacatgttatattgttttcattcgagtcattgtaatttact 21844667  T
Q  128 tttagcctagatcatgcaactccacaggtgtttta 162  Q
     ||| |||| |||||||||||  ||||||||||||    
T  21844666 cttatcctaaatcatgcaactttacaggtgtttta 21844632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 480 - 547
Target Start/End: Complemental strand, 16593485 - 16593418
Alignment:
Q  480 cttttttcttgttttccaagctggatcgacggataaagcccaattttcttctcttaatccctaagtaa 547  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16593485 ctttttgcttgtttttcaagctggatcgacggataaagcccaattttcttctattaatccctaagtaa 16593418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 27 - 295
Target Start/End: Original strand, 31261975 - 31262241
Alignment:
Q  27 tttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgtaattta 125  Q
    |||||||||||||| |||| |||| ||||||  ||||| |||| |||||||| |||| |  ||||| ||||||| |||||  ||| | |||||||||| |    
T  31261975 tttttctttgcattagaaggcaaacaagatgtcatttagaggagttgtcaatggtttaacaaacattttgtattattttctttctggacgttgtaattca 31262074  T
Q  126 gttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa-- 223  Q
    |||||| || | | ||||||||| |||||||||||||||| ||||  ||| ||| | |||| ||||||  |||| ||||||| ||| |||| |||| |      
T  31262075 gttttatcc-aaaccatgcaacttcacaggtgttttaagtctttt--tagtgagaattcatctaaattggcaaaacaagacaccacatgaa-gatcgagg 31262170  T
Q  224 agatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttc 295  Q
    | || ||| ||||||||| || ||||||||| ||||| |||||||||||| ||  |||||||||||||||||    
T  31262171 atatgaag-attgaagattaatggttcttagtaggtctttgaagacaatataagttgaagaaaattcatttc 31262241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 480 - 553
Target Start/End: Original strand, 1733508 - 1733581
Alignment:
Q  480 cttttttcttgttttccaagctggatcgacggataaagcccaattttcttctcttaatccctaagtaatctcat 553  Q
    ||||||  ||| ||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  1733508 ctttttgtttgctttgcaacctggatcgacagataaagcccaattttcttctcttaatccctaagtaacctcat 1733581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 79 - 223
Target Start/End: Original strand, 39730476 - 39730618
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcga 178  Q
    |||| |||||||| || ||| ||||| | || ||||||||||||| | ||||| |||| ||||||||||||  |||||||||| ||| ||||  ||| ||    
T  39730476 gtttaaggaacattttctatagtttttattcaagtcgttgtaattcacttttatcctaaatcatgcaactctgcaggtgttttgagtatttt--tagtga 39730573  T
Q  179 ggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa 223  Q
    | |||||| ||||| | |||| ||||||||||| |||||||||||    
T  39730574 gaaatcatataaatcagcaaaacaagacatcacatgaaggatcaa 39730618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 24047359 - 24047483
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||| |||||||||||||  |||||||| |  ||||| || ||||||||||| ||| |||||||| |||||||||||||| || |||| |||||||| |     
T  24047359 ttttatttgcatttgaaggaaaataagaggttatttagagaaattgtcaatggtttaaggaacattttgtattgttttcattcgagtcattgtaattcac 24047458  T
Q  127 ttttagcctagatcatgcaactcca 151  Q
    ||||| |||| || |||||||||||    
T  24047459 ttttatcctaaattatgcaactcca 24047483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 480 - 547
Target Start/End: Original strand, 35708183 - 35708249
Alignment:
Q  480 cttttttcttgttttccaagctggatcgacggataaagcccaattttcttctcttaatccctaagtaa 547  Q
    |||||| |||||||| |||||||||||| || |||| |||||||||||||||||||||||||||||||    
T  35708183 ctttttgcttgtttttcaagctggatcggcgcataa-gcccaattttcttctcttaatccctaagtaa 35708249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 53 - 222
Target Start/End: Original strand, 15829136 - 15829292
Alignment:
Q  53 agatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactcca 151  Q
    |||||||| ||| |||| ||||||||| ||||||||||  |||||||||||||||||  ||||||||||    | ||||| |||| ||||||||||||||    
T  15829136 agatgagagttagaggagttgtcaatggtttgaggaacgcattgtattgttttcacttaagtcgttgta----acttttatcctaaatcatgcaactcca 15829231  T
Q  152 caggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatca 222  Q
     | |||          ||||| || ||| ||||||||||||  ||||||||||||||||||||||||||||    
T  15829232 tatgtg----------ttttgcagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatca 15829292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 480 - 639
Target Start/End: Original strand, 21871720 - 21871885
Alignment:
Q  480 cttttttcttgttttccaagctggatcgacggataaagcccaattttcttctcttaatccctaagtaatctcat----tataa--agacccttgcacact 573  Q
    |||||| ||||||||||||| |||||||  ||  ||||| ||||||||||| ||||| ||||| |||| ||| |    || ||  |||||||| || |||    
T  21871720 ctttttgcttgttttccaagatggatcggtgggaaaagctcaattttcttcacttaaaccctatgtaacctcttgttgtaaaatgagaccctttcaaact 21871819  T
Q  574 attttatacattcacaaaaatttgacggggaaggtaaacgtcaagcatcagagttccaaggcaaga 639  Q
    | ||||| |||||| ||| ||||||||| ||||| ||  |||||||||||||||||||| ||||||    
T  21871820 aatttattcattcaaaaacatttgacggcgaaggcaagggtcaagcatcagagttccaaagcaaga 21871885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 181 - 302
Target Start/End: Original strand, 1732680 - 1732802
Alignment:
Q  181 aatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--agatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaag 278  Q
    ||||||||||||| ||||| ||||||||||| |||||||| ||  | || |||| ||||||||||| | |||||||||  |  |||||| |||||||||     
T  1732680 aatcatgtaaattgacaaaacaagacatcacatgaaggattaagaatatgaaga-ttgaagatcaatgattcttagaatatatttgaaggcaatacaaaa 1732778  T
Q  279 tgaagaaaattcatttcaagttcc 302  Q
    |||| |||||| ||||||||||||    
T  1732779 tgaataaaatttatttcaagttcc 1732802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 60 - 276
Target Start/End: Original strand, 17152162 - 17152379
Alignment:
Q  60 atttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgt 158  Q
    ||||| |||| ||||||||| ||||||||| || ||||||| |||||| || ||||||||||||| | ||||| | ||  |||||||||||   | ||||    
T  17152162 atttagaggagttgtcaatggtttgaggaatattttgtattattttcattcgagtcgttgtaattaacttttatcgtaattcatgcaactctgtaagtgt 17152261  T
Q  159 tttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--agatcaagaattgaagatcaagggttcttagaa 256  Q
    ||| ||| ||||| |||  || ||||||||||||   |||| |||||||||  ||||||||||||  | || ||||| |||| || || |||||||||||    
T  17152262 tttgagt-tttttttagtaagaaatcatgtaaatcggcaaaacaagacatcgtgtgaaggatcaaggatatgaagaa-tgaatatgaatggttcttagaa 17152359  T
Q  257 ggtcgttgaagacaatacaa 276  Q
    |||  ||||||| |||||||    
T  17152360 ggtttttgaagataatacaa 17152379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 479 - 547
Target Start/End: Complemental strand, 19949222 - 19949154
Alignment:
Q  479 acttttttcttgttttccaagctggatcgacggataaagcccaattttcttctcttaatccctaagtaa 547  Q
    ||||||| |||||||| ||||||||||||  |||||||||| ||||||  |||||||||||||||||||    
T  19949222 actttttgcttgtttttcaagctggatcggtggataaagcctaatttttatctcttaatccctaagtaa 19949154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 79 - 299
Target Start/End: Original strand, 24187995 - 24188217
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagat---catgcaactccacaggtgttttaagtgtttttgtag 175  Q
    |||| |||||| | ||||||||| |||| || |||| |||| ||| | ||||| |||| ||   ||| |||||||| | ||||||| ||| |||| ||||    
T  24187995 gtttaaggaactttttgtattgtattcattcgagtcattgtgattcacttttatcctaaatattcattcaactccaaatgtgttttgagtatttt-gtag 24188093  T
Q  176 cgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--agatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaata 273  Q
     ||| ||||||||||||  || ||||||| |||||| |||||||||||  | || |||| ||||||| |||  | |||||||| ||  ||||||||||||    
T  24188094 tgagaaatcatgtaaatcgaccaatcaaggcatcacatgaaggatcaagaatatgaaga-ttgaaga-caatagatcttagaaagtttttgaagacaata 24188191  T
Q  274 caaagtgaagaaaattcatttcaagt 299  Q
    |||||||||||| ||||||| |||||    
T  24188192 caaagtgaagaagattcattccaagt 24188217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 31274137 - 31274205
Alignment:
Q  232 aattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagtt 300  Q
    |||||||||| || ||||||||||||||| |||||||||||| ||  ||||||||||||||| ||||||    
T  31274137 aattgaagattaatggttcttagaaggtctttgaagacaatataagttgaagaaaattcattccaagtt 31274205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 22525744 - 22525685
Alignment:
Q  241 tcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagtt 300  Q
    |||| ||||||||||||||  |||||||||| ||||||||||||||||| ||||||||||    
T  22525744 tcaatggttcttagaaggtatttgaagacaacacaaagtgaagaaaatttatttcaagtt 22525685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 302
Target Start/End: Complemental strand, 34063931 - 34063704
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgt---ag 175  Q
    ||||| ||||| | |||||||||||||| || ||| ||||||||| | | ||| |||| |||||||||||||||| ||||||| ||| ||||| |   ||    
T  34063931 gtttgtggaactttttgtattgttttcattcgagttgttgtaattcactattatcctaaatcatgcaactccacaagtgttttgagtttttttttttgag 34063832  T
Q  176 cgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatc--aagaattgaagatcaagggttcttagaaggtcgttgaagacaata 273  Q
     ||| | ||||||||||   |||| |||||||||  |||||||||| | |||   |||| || ||  |  | |||| |||||||    ||||||||||||    
T  34063831 tgagaattcatgtaaatcggcaaaacaagacatcgtgtgaaggatcgacgatatgaagattt-aattttgatggttattagaagacatttgaagacaata 34063733  T
Q  274 caaagtgaagaaaattcatttcaagttcc 302  Q
    ||||||||||||||||||||| |||||||    
T  34063732 caaagtgaagaaaattcatttgaagttcc 34063704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 273 - 383
Target Start/End: Complemental strand, 19949417 - 19949307
Alignment:
Q  273 acaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaagatcgaaaactggatgaaaatgtaagaaatcgcacgtgcggggctgc 372  Q
    |||||||||||||||||||||||||||||||||||| ||| |||   |||||  || | |||| ||| |||||   |||||||||||| || |||||| |    
T  19949417 acaaagtgaagaaaattcatttcaagttcctaggagttttcagatgaaagaacaattggaaacgggaagaaaactcaagaaatcgcacatgaggggcttc 19949318  T
Q  373 ctcaggtgccc 383  Q
    |||||| ||||    
T  19949317 ctcaggcgccc 19949307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 301
Target Start/End: Complemental strand, 17415187 - 17415028
Alignment:
Q  141 atgcaactc-cacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaagaa--ttga 237  Q
    ||||||||| || ||||||||| ||| |||||  || ||| |||| |||||||   |||| ||||||||||||||||||||| | || || |||  ||||    
T  17415187 atgcaactctcataggtgttttgagtcttttt--agtgagaaatcgtgtaaatcggcaaaacaagacatcacgtgaaggatcgagga-catgaagattga 17415091  T
Q  238 agatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttc 301  Q
    | ||||| ||||||||| || |  |||||||||| | |||||||||||||||||||||||||||    
T  17415090 a-atcaatggttcttaggagttatttgaagacaacaaaaagtgaagaaaattcatttcaagttc 17415028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 215
Target Start/End: Original strand, 32619619 - 32619793
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatgttt-gaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||||||||||||||||||||  |||||  || |||| |||| |||| || ||||||||     ||||||||||| || ||||||||||||  |     
T  32619619 ttttctttgcatttgaagacaaataacttgagagatagaggagttgttaatggttagaggaacaa----tattgttttcaatcgagtcgttgtaatgcac 32619714  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtga 215  Q
    |||   ||||||||||| ||||||| |||||||||          |||||||| |||||||||| |  |||||||||||||||||||||    
T  32619715 tttcgtcctagatcatgtaactccataggtgtttt----------gtagcgagaaatcatgtaattcgacaaatcaagacatcacgtga 32619793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 514 - 587
Target Start/End: Original strand, 25474444 - 25474523
Alignment:
Q  514 aaagcccaattttcttctcttaatccctaagtaatctcat--tataa----agacccttgcacactattttatacattca 587  Q
    |||||||| ||||||||||||||||||||||||| || ||  |||||    |||||||||||||||||||||| ||||||    
T  25474444 aaagcccagttttcttctcttaatccctaagtaacctaatgctataaatagagacccttgcacactattttattcattca 25474523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 223
Target Start/End: Complemental strand, 27918119 - 27917926
Alignment:
Q  30 ttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagtt 128  Q
    |||||||||||||||| ||||| |||    |  ||||||| |||||| || |||||||||| |   |||||||||||| |  ||||||||||||| | ||    
T  27918119 ttctttgcatttgaaggcaaattagaattcaactataggagttgtcattggtttgaggaacgttgggtattgttttcatttgagtcgttgtaattcactt 27918020  T
Q  129 ttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa 223  Q
    |||  ||| |||||||||||||| ||||||||| | |  || | |||  || |||||||| |||  ||||||||||||||||  |||||||||||    
T  27918019 ttatactaaatcatgcaactccataggtgttttgact-attctatagtaagaaatcatgtcaatcgacaaatcaagacatcagatgaaggatcaa 27917926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 233 - 294
Target Start/End: Complemental strand, 14921971 - 14921910
Alignment:
Q  233 attgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcattt 294  Q
    ||||||| |||| ||||||||||||||   || |||||||||||||||||||||| ||||||    
T  14921971 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 14921910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 159
Target Start/End: Complemental strand, 17240991 - 17240860
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||||| ||||||||||||| | | |  ||||| |  | |||||||| ||||||||| | | || ||||||||||| || |||||| |||||||||    
T  17240991 ttttctttgcctttgaagacaaattaaaagtcatttagataagttgtcaatagtttgagga-ctttttctattgttttcattcgagtcgtcgtaatttag 17240893  T
Q  127 ttttagcctagatcatgcaactccacaggtgtt 159  Q
    |||||  ||| ||||||||||| || |||||||    
T  17240892 ttttattctaaatcatgcaacttcataggtgtt 17240860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 223
Target Start/End: Complemental strand, 21849167 - 21849017
Alignment:
Q  71 ttgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgttt 169  Q
    ||||||||| |||||||||||| |||||||||||||  |  |||| |||||||| ||||||| | || |||||||||||||| |||  |||| ||| |||    
T  21849167 ttgtcaatggtttgaggaacattttgtattgttttc-tttgagtcattgtaattcagttttatcataaatcatgcaactccataggatttttgagtcttt 21849069  T
Q  170 ttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa 223  Q
    |  ||| ||| ||| ||||||||    | | ||||||||||| |||||||||||    
T  21849068 t--tagtgagaaataatgtaaatcggaagaacaagacatcacatgaaggatcaa 21849017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 32276651 - 32276517
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||||||||||||  |||||||| |  ||||| ||||  ||||||| |||||| |||||| ||| |||||||| | || |||| |||||||| |     
T  32276651 ttttctttgcatttgaaggaaaataagaggtcatttaaaggagatgtcaatggtttgaagaacattttgcattgtttttattcgagtcattgtaattgaa 32276552  T
Q  127 ttttagcctagatcatgcaactccacaggtgtttt 161  Q
     ||||  ||| ||||| ||||||||  ||||||||    
T  32276551 gtttattctaaatcattcaactccatgggtgtttt 32276517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 15454539 - 15454482
Alignment:
Q  166 gtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa 223  Q
    |||||| ||| ||| |||| ||||||||| |||| ||||||||||| |||||||||||    
T  15454539 gtttttttagtgagaaatcgtgtaaattagcaaaacaagacatcacatgaaggatcaa 15454482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 157; Significance: 4e-83; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 20 - 303
Target Start/End: Complemental strand, 9783129 - 9782847
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    |||||||||||||||| ||||||||| ||||| |||||||| ||| |||| |||||||| ||||||||||||||||||||||||||||||| | || |||    
T  9783129 ttagtactttttctttacatttgaaggcaaatgagatgagagttagaggagttgtcaatagtttgaggaacatattgtattgttttcactcaattcattg 9783030  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 218  Q
    ||||| |||||||   ||||||||||||||||| |||| |||  |||||||| |||| |||||||||||||||| ||||||||||||||||| ||| |||    
T  9783029 taattcagttttattttagatcatgcaactccataggtttttagagtgtttt-gtagtgaggaatcatgtaaatcaacaaatcaagacatcatgtggagg 9782931  T
Q  219 atcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcct 303  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||| || | ||| ||||||||||||||||||||||||||||||    
T  9782930 atcaaagatgaagaattgaagatcaagggttcttagaaggttgtt-aaaaaaatgcaaagtgaagaaaattcatttcaagttcct 9782847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 28 - 345
Target Start/End: Original strand, 15192180 - 15192497
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatgttt-gaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||||||||||||||||||||||||||||      ||| |||| ||| ||| | ||||||||||||||||||||||||| ||| ||||||||| |     
T  15192180 ttttctttgcatttgaagacaaataagatgagagacgggggagttgttaattttttgtggaacatattgtattgttttcactcaagttgttgtaattcac 15192279  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaaga 226  Q
    ||||| |||||||| |||| ||||| ||||||||| |||||||| |||| ||| ||||||||||||  ||||| ||||||||||||||||||||||| ||    
T  15192280 ttttatcctagatcgtgcagctccataggtgttttgagtgtttt-gtagtgagaaatcatgtaaatcgacaaaccaagacatcacgtgaaggatcaagga 15192378  T
Q  227 tcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaag 326  Q
    |    ||||||||| ||| |||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| |||||| |    
T  15192379 tatgaaattgaagaccaatggttcttagaaggttgttgaagacaattcaaagtgaagacaattcatttcaagttcctaggagtttttagacggaagaacg 15192478  T
Q  327 atcgaaaactggatgaaaa 345  Q
    ||||||||| ||| |||||    
T  15192479 atcgaaaacgggacgaaaa 15192497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 28 - 378
Target Start/End: Original strand, 27302755 - 27303104
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||| ||||||||||||||||||| ||||| |  || || | ||||||||| |||||||||||| ||||||||||||||||| |||| |||||||| |     
T  27302755 ttttcgttgcatttgaagacaaatatgatgatagatagagaagttgtcaatggtttgaggaacattttgtattgttttcactcgagtcattgtaattcaa 27302854  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaaga 226  Q
    || ||  ||||||||||||||| ||  |||||||| ||| |||| |||| || |||||||||||||  |||||| ||||||||||||| | |||||| ||    
T  27302855 ttatatactagatcatgcaacttcat-ggtgtttttagtatttt-gtagtgatgaatcatgtaaatcgacaaattaagacatcacgtgcaagatcaagga 27302952  T
Q  227 tcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaag 326  Q
    |    ||||||| || |||||||||||||||||  ||||||||| || |||||||||||||||||||| ||||||||||||| ||| |||| |||||| |    
T  27302953 tatgaaattgaacattaagggttcttagaaggtttttgaagacattataaagtgaagaaaattcattttaagttcctaggagttttcagacggaagaacg 27303052  T
Q  327 atcgaaaactggatgaaaatgtaagaaatcgcacgtgcggggctgcctcagg 378  Q
    ||||||||| ||| |||||   |||||||| ||| || || |||||||||||    
T  27303053 atcgaaaacgggacgaaaacacaagaaatcacacctgaggagctgcctcagg 27303104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 28 - 304
Target Start/End: Complemental strand, 25315369 - 25315093
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||| |||||||||| |||||||||||||  || |||| ||||||||| |||||||||||||||||||||||||||||  ||||||||||||| ||    
T  25315369 ttttctttacatttgaagataaataagatgagagatagaggagttgtcaatgctttgaggaacatattgtattgttttcacttgagtcgttgtaattaag 25315270  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaaga 226  Q
    ||||| ||||||||||||||||||| | | ||||| |||   ||||||| ||||||||||||||||  ||||||||||||||| | ||||||||||| ||    
T  25315269 ttttatcctagatcatgcaactccatatgggttttgagt-aatttgtagtgaggaatcatgtaaatcgacaaatcaagacatcgcatgaaggatcaagga 25315171  T
Q  227 tcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttccta 304  Q
    |    |||| ||||| || |||||||| || || ||||||||||||||||  | ||| ||||||||||||||||||||    
T  25315170 tatgaaattaaagataaatggttcttaaaatgttgttgaagacaatacaagataaagtaaattcatttcaagttccta 25315093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 28 - 335
Target Start/End: Complemental strand, 34864429 - 34864126
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||| ||||||||||||||||||| | | ||| |||| ||||||||| |||||||||| |||  ||||||||||||||  ||| |||||||| |     
T  34864429 ttttctttgtatttgaagacaaataagataaaagttagaggagttgtcaatggtttgaggaacgtatcatattgttttcactc--gtcattgtaattcac 34864332  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaaga 226  Q
    ||||| |||| || ||| |||||||   ||||||| |||||||| |||| ||| ||||||||||||  ||||||||||||||||||||||||||||||||    
T  34864331 ttttatcctaaattatgaaactccat--gtgttttgagtgtttt-gtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaaga 34864235  T
Q  227 tcaaga-attgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaa 325  Q
    |   || ||||||| |||| ||||||||||||||  ||| |||||||||||| |||||||||||||||| |||||||||| || ||| |||  ||| ||     
T  34864234 tatggagattgaag-tcaatggttcttagaaggtttttgtagacaatacaaaatgaagaaaattcatttaaagttcctagaagttttcagatggaaaaat 34864136  T
Q  326 gatcgaaaac 335  Q
    ||||||||||    
T  34864135 gatcgaaaac 34864126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 87 - 308
Target Start/End: Complemental strand, 10320297 - 10320078
Alignment:
Q  87 aacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcat 186  Q
    ||||||||||||| ||||||||| ||||||||||||| | ||||| |||||| |||||||||||| ||||||||||||  ||||||||| ||| |||||     
T  10320297 aacatattgtattcttttcactcgagtcgttgtaattcacttttatcctagaccatgcaactccataggtgttttaag-ctttttgtagtgagaaatcag 10320199  T
Q  187 gtaaattaacaaatcaagacatcacgtgaaggatcaaagat-caagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaa 285  Q
    ||||||| ||||||| |||||| || ||||||||||| |||   | |||||||| | || |||| |||||||||| | ||| ||||||||||||||||||    
T  10320198 gtaaattgacaaatc-agacataacatgaaggatcaaggatgtgaaaattgaag-ttaatggttgttagaaggtcttcgaaaacaatacaaagtgaagaa 10320101  T
Q  286 aattcatttcaagttcctaggag 308  Q
    |||| ||||||||||||||||||    
T  10320100 aatttatttcaagttcctaggag 10320078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 28 - 335
Target Start/End: Original strand, 18897968 - 18898266
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||||||||||||||||||||| |||||  || | || ||||||||| ||| |||||||||||||||||||||||||| || ||||||||||       
T  18897968 ttttctttgcatttgaagacaaataagttgagagatagatgatttgtcaatggtttaaggaacatattgtattgttttcactcgagccgttgtaattcgc 18898067  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaag- 225  Q
    ||||  | ||||  |||||||| || |||||          |||||||| ||| ||||||||||||  ||||||||||||||||| ||||||||| | |     
T  18898068 ttttttcatagactatgcaacttcataggtg----------ttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacatgaaggatccaggg 18898157  T
Q  226 -atcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaa 324  Q
     ||  || ||||||| |||  |||||||| |||||  ||||| |||||||||||| |||||||||||||||||||||||||||  ||| ||||  |||||    
T  18898158 tatgcag-attgaag-tcagtggttcttaaaaggtttttgaatacaatacaaagtaaagaaaattcatttcaagttcctaggatttttcagacgtaagaa 18898255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 106 - 308
Target Start/End: Complemental strand, 17026755 - 17026554
Alignment:
Q  106 actctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaaga 205  Q
    |||| ||| ||||||||| | ||||| ||||||||||||||||||| ||||||||| |||| ||||||||  |  ||||||||||||  |||||| ||||    
T  17026755 actcgagttgttgtaattcacttttatcctagatcatgcaactccataggtgttttgagtg-ttttgtagtcataaatcatgtaaatcgacaaattaaga 17026657  T
Q  206 catcacgtgaaggatcaaagat-caagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttccta 304  Q
    |||||| |||||||||||  ||   |||||| ||| | || |||||||| || ||  |||||||||||||||||||||||||||| ||||||||||||||    
T  17026656 catcacatgaaggatcaagtatatgagaatttaag-ttaatggttcttaaaaagtttttgaagacaatacaaagtgaagaaaattaatttcaagttccta 17026558  T
Q  305 ggag 308  Q
    ||||    
T  17026557 ggag 17026554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 51884756 - 51884886
Alignment:
Q  205 acatcacgtgaaggatcaaagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttccta 304  Q
    ||||||| |||||||||||||||    |||||||||||||||| ||||||||| | |||||| |||||||||||||||||||||| ||||||||||||||    
T  51884756 acatcacatgaaggatcaaagatatgaaattgaagatcaagggctcttagaagattgttgaatacaatacaaagtgaagaaaattaatttcaagttccta 51884855  T
Q  305 ggagattttagaccgaagaaagatcgaaaac 335  Q
     ||| ||| |||| |||||| ||||||||||    
T  51884856 tgagttttcagacggaagaacgatcgaaaac 51884886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 127 - 302
Target Start/End: Complemental strand, 31859938 - 31859764
Alignment:
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaaga 226  Q
    ||||| |||| ||||||||||| || ||||||||| ||| |||||  || ||| |||||||||||| | |||| ||||||| || |||||||||| | ||    
T  31859938 ttttatcctaaatcatgcaactgcataggtgttttgagtcttttt--agtgagaaatcatgtaaatcagcaaaacaagacaccaggtgaaggatcgagga 31859841  T
Q  227 tcaagaat--tgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    | | ||||  |||||||||| ||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||    
T  31859840 t-atgaatattgaagatcaatggttcttagaaggtatttgaagacaatacaaagtgaagaaaatttatttcaagttcc 31859764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 79 - 302
Target Start/End: Original strand, 19601827 - 19602049
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcga 178  Q
    ||||||||||| | || |||| |||||| || | | ||||||||| | ||||| |||| |||||||||||||| |||| |||| || |||||  ||| ||    
T  19601827 gtttgaggaactttttctatttttttcattcaaattgttgtaattcacttttatcctaaatcatgcaactccataggtatttttagcgttttc-tagtga 19601925  T
Q  179 ggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaaga--attgaagatcaagggttcttagaaggtcgttgaagacaatacaa 276  Q
    | |||||||||||| ||||||||||||||||||||||| |||| | ||| | ||  |||||||| ||| |||||||| |||||  |||||||||||| ||    
T  19601926 gaaatcatgtaaatcaacaaatcaagacatcacgtgaaagatcgaggat-atgatgattgaaga-caatggttcttaaaaggtttttgaagacaataaaa 19602023  T
Q  277 agtgaagaaaattcatttcaagttcc 302  Q
    |||| ||||||||||||||| |||||    
T  19602024 agtggagaaaattcatttcatgttcc 19602049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 90 - 335
Target Start/End: Complemental strand, 47024831 - 47024596
Alignment:
Q  90 atattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgta 189  Q
    |||||||||||||||||||| || |||| ||||| | ||||| |||||||||||||||| ||  ||||||||          |||| ||| |||||||||    
T  47024831 atattgtattgttttcactcgagccgttctaattcacttttatcctagatcatgcaacttcaatggtgtttt----------gtagtgagaaatcatgta 47024742  T
Q  190 aattaacaaatcaagacatcacgtgaaggatcaaagatcaagaa--ttgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaa 287  Q
    |||  | ||||||||||||| | ||||||||||| || || |||  |||||| |||| ||||||||||||||  ||||| ||| ||||||||||||| ||    
T  47024741 aatcgaaaaatcaagacatcgcatgaaggatcaagga-catgaagattgaag-tcaatggttcttagaaggtttttgaaaacagtacaaagtgaagagaa 47024644  T
Q  288 ttcatttcaagttcctaggagattttagaccgaagaaagatcgaaaac 335  Q
    || |||||||||||||||||| ||| |||  |||||| ||||||||||    
T  47024643 tttatttcaagttcctaggagttttcagatggaagaacgatcgaaaac 47024596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 79 - 308
Target Start/End: Complemental strand, 1695933 - 1695704
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcga 178  Q
    |||| ||||||||||||||||| ||| | |  |||| |||||||| | ||||| ||||||||||||||||||| || | |||| || ||||  |||| ||    
T  1695933 gtttcaggaacatattgtattggttttatttgagtctttgtaattcaattttatcctagatcatgcaactccatagttattttgagggttt--gtagtga 1695836  T
Q  179 ggaa-tcatgtaaattaacaaa-tcaagacatcacgtgaaggatcaaagatc--aagaattgaagatcaagggttcttagaaggtcgttgaagacaatac 274  Q
    |||| ||||| |||| || ||| ||||||||||| ||||| |||||| |||   |||| ||||| || ||   |||||||||||| ||||||||||||||    
T  1695835 ggaaatcatgaaaatcaaaaaaatcaagacatcatgtgaatgatcaacgatatgaaga-ttgaa-ataaaacattcttagaaggttgttgaagacaatac 1695738  T
Q  275 aaagtgaagaaaattcatttcaagttcctaggag 308  Q
    |||||||| |||||||||||||||||||||||||    
T  1695737 aaagtgaataaaattcatttcaagttcctaggag 1695704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 28 - 169
Target Start/End: Complemental strand, 1676433 - 1676291
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||| |||||||||||||||||||||| |  || |||| ||||||||| |||||||||||||||||| |||||||| || |||  |||||||| |     
T  1676433 ttttctttacatttgaagacaaataagatgaaagatagaggagttgtcaatggtttgaggaacatattgtaatgttttcattcgagtttttgtaattcaa 1676334  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgttt 169  Q
    ||||| |||| |||||||||||||| || |||||| |||||||    
T  1676333 ttttatcctatatcatgcaactccatagttgttttcagtgttt 1676291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 28 - 169
Target Start/End: Complemental strand, 1682961 - 1682819
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||| |||||||||||||||||||||| |  || |||| ||||||||| |||||||||||||||||| |||||||| || |||  |||||||| |     
T  1682961 ttttctttacatttgaagacaaataagatgaaagatagaggagttgtcaatggtttgaggaacatattgtaatgttttcattcgagtttttgtaattcaa 1682862  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgttt 169  Q
    ||||| |||| |||||||||||||| || |||||| |||||||    
T  1682861 ttttatcctatatcatgcaactccatagttgttttcagtgttt 1682819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 142 - 345
Target Start/End: Original strand, 5676291 - 5676494
Alignment:
Q  142 tgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatc--aagaattgaag 239  Q
    |||||||||| ||||||||| ||| ||||| ||| || |||||||||||||| | ||||||||||||||| ||||||||||| |||   |||  |||||     
T  5676291 tgcaactccataggtgttttgagtattttt-tagtgatgaatcatgtaaattgataaatcaagacatcacatgaaggatcaaggatattaagt-ttgaat 5676388  T
Q  240 atcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaagatcgaaaactgga 339  Q
    |  || | ||||||||||||  |||||||||||||||  ||||||||||||||||| |||| ||||||| || ||||| ||||||  ||||||||| |||    
T  5676389 acaaatgattcttagaaggtttttgaagacaatacaagatgaagaaaattcatttcgagttactaggagtttctagacggaagaacaatcgaaaacggga 5676488  T
Q  340 tgaaaa 345  Q
     |||||    
T  5676489 cgaaaa 5676494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 28 - 335
Target Start/End: Complemental strand, 12111468 - 12111158
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgta-ttgttttcactctagtcgttgtaattta 125  Q
    |||| |||||||||||||||||| ||||||||| | | |||| ||||||||| |||||||||||||||||| || ||||||| | ||||||||||||| |    
T  12111468 ttttatttgcatttgaagacaaa-aagatgagaat-agaggagttgtcaatggtttgaggaacatattgtattttttttcacacgagtcgttgtaattca 12111371  T
Q  126 gttttagcctagatcatg-------caactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 218  Q
     ||||| ||||||| |||         |    | ||||||||| |||| |||||||| || ||||| |||||||  |||||||||| |||||||||||||    
T  12111370 cttttatcctagat-atgagtgttttgatattaaaggtgttttgagtg-ttttgtagtga-gaatcttgtaaatcgacaaatcaagtcatcacgtgaagg 12111274  T
Q  219 atcaa-agatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagac 317  Q
    ||||| | || ||  ||||||| |||| |||||||| |||||  || |||| ||||||||||||||||||||||||||||||| ||||||| ||| | ||    
T  12111273 atcaagatatgaa-tattgaag-tcaatggttcttataaggttttttaagataatacaaagtgaagaaaattcatttcaagtttctaggagttttcaaac 12111176  T
Q  318 cgaagaaagatcgaaaac 335  Q
     |||||| ||||||||||    
T  12111175 agaagaatgatcgaaaac 12111158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 181 - 302
Target Start/End: Original strand, 13064555 - 13064677
Alignment:
Q  181 aatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaaga--attgaagatcaagggttcttagaaggtcgttgaagacaatacaaag 278  Q
    |||||||||||||  |||||||||||||||||||||||||||| ||| ||||  ||||||| |||| |||||||||| |||  ||||||||||| |||||    
T  13064555 aatcatgtaaattggcaaatcaagacatcacgtgaaggatcaaggat-aagacgattgaagttcaatggttcttagagggtatttgaagacaattcaaag 13064653  T
Q  279 tgaagaaaattcatttcaagttcc 302  Q
    |||| ||| || ||||||||||||    
T  13064654 tgaacaaatttgatttcaagttcc 13064677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 5906858 - 5906771
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtc 114  Q
    |||| |||||||||||||||||| ||||||||| ||| ||||||||||||| |||||||||||||||| |||||||||||||| ||||    
T  5906858 ttttatttgcatttgaagacaaacaagatgagagttagaggaattgtcaatggtttgaggaacatattatattgttttcactcgagtc 5906771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 28 - 302
Target Start/End: Original strand, 21077210 - 21077484
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||||||||||||| ||||| ||| |  ||||| |||| ||||||||| |||||| ||| | ||||||| |||| | || |||||||||| || |     
T  21077210 ttttctttgcatttgaaggcaaattagaagtcatttagaggagttgtcaatggtttgagaaaccttttgtattatttttattcgagtcgttgtagttcaa 21077309  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaaga 226  Q
    ||||| |  | |||||  || |||| |||||||||  || |||||  || ||  |||||||||||||  |||| ||||||| || ||| |||||| |||     
T  21077310 ttttatcacaaatcatcaaattccataggtgtttttggtcttttt--agtgaaaaatcatgtaaattggcaaaacaagacaccaagtggaggatcgaagt 21077407  T
Q  227 tca-agaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    |   || |||||| ||||| ||||||||||||||  | |||||||||||||| |||| |||||||||||||||||||    
T  21077408 tatgaggattgaatatcaatggttcttagaaggtaatcgaagacaatacaaattgaataaaattcatttcaagttcc 21077484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 22119623 - 22119767
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||||||||||||| ||||| ||| |  |||||||||| ||||||||| ||||||||||| |||||| |||||||  || |||| ||||||||||     
T  22119623 ttttctttgcatttgaaggcaaattagaagttatttataggagttgtcaatggtttgaggaacaaattgtaatgttttcgttcgagtcattgtaatttac 22119722  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgttttt 171  Q
    ||||| || | ||||||||||| || |||| |||| ||| |||||    
T  22119723 ttttacccaaaatcatgcaactacataggtattttgagtcttttt 22119767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 60 - 307
Target Start/End: Original strand, 26159765 - 26160011
Alignment:
Q  60 atttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgt 158  Q
    ||||||| || |||||||| |||| || ||||| |||||||||||||| || ||||||||||||||||||||  |||| || || ||||| || | ||||    
T  26159765 atttataagagttgtcaatagtttaagaaacattttgtattgttttcattcgagtcgttgtaatttagttttgtcctaaattatccaacttcatatgtgt 26159864  T
Q  159 tttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--agatcaagaattgaagatcaagggttcttagaa 256  Q
    ||| ||| ||||  ||| ||  ||||||||| || | |||| |||||||||| |||||||||  |  | || ||| |||||||||||| |||||||| ||    
T  26159865 tttgagtctttt--tagtgaaaaatcatgtagatcagcaaaacaagacatcatgtgaaggattcaggatatgaag-attgaagatcaatggttcttataa 26159961  T
Q  257 ggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctagga 307  Q
    |||| |||||  ||| | ||  |||||||||||||||||||||||| ||||    
T  26159962 ggtctttgaaatcaa-ataagttgaagaaaattcatttcaagttccaagga 26160011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 28 - 276
Target Start/End: Original strand, 46647173 - 46647420
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||| ||||||||  ||||||||  | ||||| || | ||||||||| ||| | ||| || |||||||||||||| |||||||| ||||||| |     
T  46647173 ttttctttgtatttgaaggaaaataagagaaaatttagagaagttgtcaatggtttcaagaatattttgtattgttttcattctagtcggtgtaattcac 46647272  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaaga 226  Q
    ||||| |||| |||||||||||||| | |||  || ||| | ||| || |||| |||||| ||||| | |||| ||||||||||||||| ||||||||||    
T  46647273 ttttatcctaaatcatgcaactccataagtg--ttgagt-tatttttatcgagaaatcatataaatcagcaaaacaagacatcacgtgagggatcaaaga 46647369  T
Q  227 t-caagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaa 276  Q
    |   | || |||||||||| |||||||| |||||  || |||| |||||||    
T  46647370 tatgaaaaatgaagatcaatggttcttaaaaggtttttaaagataatacaa 46647420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 480 - 553
Target Start/End: Original strand, 27303128 - 27303201
Alignment:
Q  480 cttttttcttgttttccaagctggatcgacggataaagcccaattttcttctcttaatccctaagtaatctcat 553  Q
    |||||| |||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||| |||||    
T  27303128 ctttttgcttgttttccaagctggatcggtgcagaaagcccaattttcttctcttaaaccctaagtaacctcat 27303201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 33519212 - 33519281
Alignment:
Q  233 attgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    ||||||||||||  |||||||||||||| |||||||||||||||  ||||||||||||||||||| ||||    
T  33519212 attgaagatcaatcgttcttagaaggtctttgaagacaatacaagttgaagaaaattcatttcaaattcc 33519281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 4953658 - 4953741
Alignment:
Q  27 tttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactc 109  Q
    |||||||||| ||||||||| |||||||||| ||  || |||| |||| |||| ||||||||||||||||||||||||||||||    
T  4953658 tttttctttgtatttgaagagaaataagatgtgagataaaggagttgttaatggtttgaggaacatattgtattgttttcactc 4953741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 251 - 302
Target Start/End: Original strand, 23353818 - 23353869
Alignment:
Q  251 ttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  23353818 ttagaaggtcttttaagacaatacaaagtgaagaaaattcatttcaagttcc 23353869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 301
Target Start/End: Complemental strand, 7024198 - 7024083
Alignment:
Q  187 gtaaattaacaaatcaagacatcacgtgaaggatcaaagatc--aagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaaga 284  Q
    |||||||  |||| |||||||||||||||||||||||||||   |||| ||||||| ||| |||||||||||| |  ||||||| |||||||  ||||||    
T  7024198 gtaaattggcaaaacaagacatcacgtgaaggatcaaagatatgaaga-ttgaagaccaatggttcttagaagattcttgaagataatacaagatgaaga 7024100  T
Q  285 aaattcatttcaagttc 301  Q
    |||||||| | ||||||    
T  7024099 aaattcatataaagttc 7024083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 17187355 - 17187422
Alignment:
Q  233 attgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagtt 300  Q
    ||||||| |||  |||||||||||| |  |||||||||||||||||| ||||||||||||||||||||    
T  17187355 attgaagttcagtggttcttagaagttatttgaagacaatacaaagtaaagaaaattcatttcaagtt 17187422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 5125580 - 5125629
Alignment:
Q  27 tttttctttgcatttgaagacaaataagatgagatttataggaattgtca 76  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||||||||    
T  5125580 tttttttttgcatttgaagacaaataagatgagaattagaggaattgtca 5125629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 237 - 374
Target Start/End: Complemental strand, 5906691 - 5906554
Alignment:
Q  237 aagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaagatcgaaaact 336  Q
    ||||| || ||||||||||||||  ||||||| |||||||||| ||||||||||||||||| ||| ||  |  ||  |||| |||||| ||||||||||     
T  5906691 aagattaatggttcttagaaggtttttgaagataatacaaagttaagaaaattcatttcaaattcataaaaatttccagacagaagaacgatcgaaaaca 5906592  T
Q  337 ggatgaaaatgtaagaaatcgcacgtgcggggctgcct 374  Q
     || ||||||| ||||| | |||| |  ||||||||||    
T  5906591 tgacgaaaatgcaagaatttgcacataaggggctgcct 5906554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 33 - 161
Target Start/End: Original strand, 21167711 - 21167840
Alignment:
Q  33 tttgcatttgaagacaaataagatgagatttataggaattgtcaatgtttga-ggaacatattgtattgttttcactctagtcgttgtaatttagtttta 131  Q
    |||||||||||||  |||||||| |  ||||| |||| ||||| |||||| | ||||||| |||||||||||||| || ||| ||||||||||| |||||    
T  21167711 tttgcatttgaaggaaaataagacgtcatttagaggagttgtccatgttttaaggaacattttgtattgttttcattcgagttgttgtaatttactttta 21167810  T
Q  132 gcctagatcatgcaactccacaggtgtttt 161  Q
     |||| |  ||| |||| || |||||||||    
T  21167811 tcctaaaatatgtaacttcataggtgtttt 21167840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 79 - 252
Target Start/End: Original strand, 18444279 - 18444451
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcga 178  Q
    |||||||||||   ||||| |||||||| || || || ||||||| ||||||| |||| |||| ||||||||| |||| |||||||| ||||    | |     
T  18444279 gtttgaggaactctttgtaatgttttcattcgagccgctgtaattcagttttatcctaaatcacgcaactccataggtattttaagtctttt--ccgtgg 18444376  T
Q  179 ggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagat-caagaattgaagatcaagggttctt 252  Q
    | | ||||||||||   |||| ||||||||||||||||||||| | ||| |||  |||||||||||| |||||||    
T  18444377 gaagtcatgtaaatctgcaaaacaagacatcacgtgaaggatcgatgatacaaagattgaagatcaatggttctt 18444451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 269
Target Start/End: Original strand, 9288239 - 9288428
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcga 178  Q
    |||||||||||| ||||||||||||||| |  |||| || ||||| | ||||| | || |||||| | ||||| | || |||| ||| ||||  ||| ||    
T  9288239 gtttgaggaacaaattgtattgttttcatttgagtcattataattcatttttatcataaatcatgtacctccatatgtttttttagtctttt--tagtga 9288336  T
Q  179 ggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--agatcaagaattgaagatcaagggttcttagaaggtcgttgaagac 269  Q
    | ||||||||||||   |||| |||||||||| ||||||||||||  | || ||| |||||||| ||| ||||||||| |||| ||| |||||    
T  9288337 gaaatcatgtaaatcggcaaaacaagacatcaagtgaaggatcaaggatatgaag-attgaagaccaatggttcttagcaggttgttaaagac 9288428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 17339951 - 17339817
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatgt-ttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||| ||| ||||| ||| ||||||||| || ||||| |||| || || |||  ||||||||||| ||||||  |||||| ||||||| |||||||| |     
T  17339951 ttttatttacatttaaaggcaaataagaggacatttagaggagttatccatggattgaggaacattttgtatctttttcattctagtctttgtaattcaa 17339852  T
Q  127 ttttagcctagatcatgcaactccacaggtgtttt 161  Q
    ||||| |||| ||||||||| | || |||||||||    
T  17339851 ttttatcctaaatcatgcaatttcataggtgtttt 17339817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 480 - 639
Target Start/End: Complemental strand, 25314951 - 25314786
Alignment:
Q  480 cttttttcttgttttccaagctggatcgacggataaagcccaattttcttctcttaatccctaagtaatctcatt------ataaagacccttgcacact 573  Q
    |||||| ||||||||||||||||||||   ||| || |  || |||||||||||||| || ||||||| |||||       ||| ||| |||| ||||||    
T  25314951 ctttttgcttgttttccaagctggatcattggaaaatgttcagttttcttctcttaaaccttaagtaacctcatgctctaaatagagatccttccacact 25314852  T
Q  574 attttatacattcacaaaaatttgacggggaaggtaaacgtcaagcatcagagttccaaggcaaga 639  Q
    |||||||  | ||| ||| ||||||||  ||||| ||  |||||||||||||||||||||| ||||    
T  25314851 attttattgaatcagaaacatttgacgatgaaggcaagggtcaagcatcagagttccaaggtaaga 25314786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 478 - 539
Target Start/End: Complemental strand, 9782812 - 9782751
Alignment:
Q  478 cacttttttcttgttttccaagctggatcgacggataaagcccaattttcttctcttaatcc 539  Q
    |||||||| ||| |||| ||| ||||||||  |||||||||||||||||||||| |||||||    
T  9782812 cactttttgcttatttttcaaactggatcggtggataaagcccaattttcttctattaatcc 9782751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 4732954 - 4733002
Alignment:
Q  249 tcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaa 297  Q
    |||||||||||| || ||||||||||||  |||||||||||||||||||    
T  4732954 tcttagaaggtctttaaagacaatacaagttgaagaaaattcatttcaa 4733002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 492 - 633
Target Start/End: Original strand, 51885044 - 51885191
Alignment:
Q  492 tttccaagctggatcgacggataaagcccaattttcttctcttaatccctaagtaatctcatt------ataaagacccttgcacactattttatacatt 585  Q
    ||||||||||||||||  | | |||||| | |||||||||||||| |||||||||| ||||||      ||| |||||||||| || |||||||| ||||    
T  51885044 tttccaagctggatcggtgcagaaagcctagttttcttctcttaaaccctaagtaacctcattctataaatagagacccttgcgcattattttattcatt 51885143  T
Q  586 cacaaaaatttgacggggaaggtaaacgtcaagcatcagagttccaag 633  Q
       ||||| ||||||| ||  | ||  ||||||||||| |||||||||    
T  51885144 tcgaaaaaattgacggtgagagcaagggtcaagcatcaaagttccaag 51885191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 1696707 - 1696656
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg 79  Q
    |||| ||| ||||||||||||||||||||||||  ||||||| |||||||||    
T  1696707 ttttatttacatttgaagacaaataagatgagagatataggagttgtcaatg 1696656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 302
Target Start/End: Original strand, 29437674 - 29437712
Alignment:
Q  264 gaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  29437674 gaagacaatacaaagtgaagaaacttcatttgaagttcc 29437712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 22119803 - 22119871
Alignment:
Q  233 attgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    |||||||||||| |||||||||| |||  |||| ||||||| |||||| | |||||| ||||||||||||    
T  22119803 attgaagatcaatggttcttagagggtttttgaggacaata-aaagtgtacaaaattaatttcaagttcc 22119871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 24925782 - 24925903
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||| |||| ||||||||| |||||||| |  ||||| | || |||||||| ||||||| ||||| |||||||||||||| |  ||||| ||||||| |     
T  24925782 ttttatttgtatttgaagataaataagaagtcatttaaaagagttgtcaatcgtttgagtaacattttgtattgttttcatttgagtcgctgtaattcac 24925881  T
Q  127 ttttagcctagatcatgcaact 148  Q
    ||||| | || |||||| ||||    
T  24925882 ttttatcataaatcatgtaact 24925903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 20985296 - 20985264
Alignment:
Q  262 ttgaagacaatacaaagtgaagaaaattcattt 294  Q
    |||||||||||||||||||||||||| ||||||    
T  20985296 ttgaagacaatacaaagtgaagaaaactcattt 20985264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 118 - 221
Target Start/End: Original strand, 29437539 - 29437640
Alignment:
Q  118 gtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaag 217  Q
    |||||| ||||||| |||| ||||||||||| || || |||||| ||| ||||  ||  ||| ||||||||||||   |||  |||||||||||||||||    
T  29437539 gtaattcagttttatcctaaatcatgcaacttcatagctgttttgagtctttt--taatgagaaatcatgtaaatcggcaagacaagacatcacgtgaag 29437636  T
Q  218 gatc 221  Q
    ||||    
T  29437637 gatc 29437640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 149; Significance: 2e-78; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 28 - 335
Target Start/End: Original strand, 22229786 - 22230088
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||||||||||||||||||||||||||||  || |||      ||||| ||| |||||  ||||||||||||||||||  ||||||||||||| ||    
T  22229786 ttttctttgcatttgaagacaaataagatgagagatagaggc-----caatggtttaaggaatgtattgtattgttttcacttgagtcgttgtaattcag 22229880  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaaga 226  Q
    ||||| |||||| |||||||||||||| |||||||  || |||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22229881 ttttatcctagaccatgcaactccacaagtgttttgggtatttt-gtagtgaggaatcatgtaaatcaacaaatcaagacatcacgtgaaggatcaaaga 22229979  T
Q  227 tcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaag 326  Q
    |   ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||  ||| ||||||||||||||| ||| |||| |||||| |    
T  22229980 tatggaattgaagatcaagggttcttagaaggttgttgaagataataccaagtgaagaaaacacatctcaagttcctaggagttttcagacggaagaacg 22230079  T
Q  327 atcgaaaac 335  Q
    |||||||||    
T  22230080 atcgaaaac 22230088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 28 - 281
Target Start/End: Complemental strand, 12340152 - 12339899
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||||||||||||||||||||| ||||| ||| |||| ||||||||| ||||||||||||||| |||| ||||||||   ||| |||||||| ||    
T  12340152 ttttctttgcatttgaagacaaataaggtgagagttagaggagttgtcaatggtttgaggaacatattatattattttcacttgtgtcattgtaattcag 12340053  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaaga 226  Q
    |||||  ||||||||||||||| || | || ||||  ||||||| ||||  ||||||||| ||||| |||||||||||||||||||||||||||||| ||    
T  12340052 ttttatactagatcatgcaacttcatatgtattttgcgtgtttt-gtagtaaggaatcatataaatcaacaaatcaagacatcacgtgaaggatcaagga 12339954  T
Q  227 tcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtga 281  Q
    | |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12339953 tgaagaattgaaaatcaagggttcttagaaggtcgttgaagacaatacaaagtga 12339899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 30 - 308
Target Start/End: Original strand, 24841732 - 24842010
Alignment:
Q  30 ttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagtt 128  Q
    ||||||||||||||||||||||||| | |||  || |||| || |||||| |||||||||||||||||||||||||||||| ||||||||||| | | ||    
T  24841732 ttctttgcatttgaagacaaataagtttagagatagaggagttttcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaagtcactt 24841831  T
Q  129 ttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagat- 227  Q
    ||| ||||||||||| ||||||| ||||||||| |||| |||||||| ||| ||||||||||||| | ||||||||||| ||||||||||||||| |||     
T  24841832 ttatcctagatcatggaactccataggtgtttttagtg-ttttgtagtgagaaatcatgtaaattgaaaaatcaagacaacacgtgaaggatcaaggata 24841930  T
Q  228 caagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
       | ||||||| |||| |||||||||||||   |||||||||| ||||| |||||||||||||||||| |||||||||||    
T  24841931 tgtggattgaag-tcaatggttcttagaaggattttgaagacaacacaaaatgaagaaaattcatttcatgttcctaggag 24842010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 28 - 348
Target Start/End: Original strand, 17027504 - 17027824
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||||||||| ||||||| |||||||||| ||| |||  | ||||| | |||||||||||||||| ||||||||||||  ||||||||||||| |     
T  17027504 ttttctttgcatttaaagacaattaagatgagagttagaggcgtggtcaagggtttgaggaacatattgaattgttttcacttgagtcgttgtaattcac 17027603  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaag- 225  Q
    ||||| |||| |||| ||||||||| ||||||||| | || |||||    ||| ||||||||||||  | |||||||||||||||||| | ||||||||     
T  17027604 ttttatcctaaatcacgcaactccataggtgttttgactg-ttttgccatgagaaatcatgtaaatcgaaaaatcaagacatcacgtgcaagatcaaaga 17027702  T
Q  226 -atcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaa 324  Q
     || ||| ||||||| | || | ||||||||||||  |||||||||||||||||||||||||||| ||||||| |||||||||| ||  | ||  |||||    
T  17027703 tatgaag-attgaag-ttaatgcttcttagaaggttcttgaagacaatacaaagtgaagaaaattaatttcaatttcctaggagtttccatacgaaagaa 17027800  T
Q  325 agatcgaaaactggatgaaaatgt 348  Q
     |||||||||  ||||||||||||    
T  17027801 cgatcgaaaaaaggatgaaaatgt 17027824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 28 - 329
Target Start/End: Complemental strand, 26330206 - 26329906
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatgtt-tgaggaacatattgtattgttttcactctagtc-gttgtaattta 125  Q
    |||||||||||||  |||||||||||| |||||  |  || | ||||||||| | | ||||| |||||||||||||||||||  || | |||||||||      
T  26330206 ttttctttgcattgtaagacaaataagttgagagatggagtagttgtcaatggtctaaggaatatattgtattgttttcacttgagccagttgtaattcc 26330107  T
Q  126 gttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa-- 223  Q
     ||||| |||||||||||||||| || ||||||||| |||||||| |||| ||  ||||||||||||| | ||||||||||||||| |||||||||||      
T  26330106 cttttatcctagatcatgcaacttcataggtgttttgagtgtttt-gtagtga--aatcatgtaaattgaaaaatcaagacatcacatgaaggatcaagg 26330010  T
Q  224 agatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaaga 323  Q
    | || ||| ||||||| |||| ||| ||||||||||  || |||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||    
T  26330009 atatgaag-attgaag-tcaatggtccttagaaggttttttaagacaatacaaagtgaagaaaattcatttcaagttcctaggagttttcagacggaaga 26329912  T
Q  324 aagatc 329  Q
    | ||||    
T  26329911 acgatc 26329906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 28 - 308
Target Start/End: Complemental strand, 11274469 - 11274187
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgag-gaacatattgtattgttttcactctagtcgttgtaattta 125  Q
    |||||||||||||| ||||| |||||||| |||  || |  | |||||||| |||||||  ||||||||||||||||||||||  || ||||| || ||     
T  11274469 ttttctttgcatttaaagaccaataagataagagatagatcagttgtcaatggtttgagaaaacatattgtattgttttcacttgagccgttgcaacttg 11274370  T
Q  126 gttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa-- 223  Q
     ||||| |||| |||||||||||||| ||||||||| |||| ||||||||  || ||||||||| ||  ||||||||||||||||| |||||||||||      
T  11274369 cttttatcctaaatcatgcaactccataggtgttttgagtg-ttttgtagtaagaaatcatgtatatcgacaaatcaagacatcacatgaaggatcaagg 11274271  T
Q  224 agatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
    | || ||| |||||||| ||| ||||||||||||||| |||||||||||||||  ||| |||| |||||||||||||||||||||    
T  11274270 atatgaag-attgaagaccaatggttcttagaaggtctttgaagacaatacaagatgatgaaatttcatttcaagttcctaggag 11274187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 20 - 300
Target Start/End: Original strand, 16634015 - 16634296
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    |||||||||||| ||| | ||| |||| ||||||||||||| ||  | || ||||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  16634015 ttagtactttttttttacgtttaaagaaaaataagatgagagttggatgagttgtcaatggtttgagaaacatattgtattgttttcactcgagtcgttg 16634114  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 218  Q
    ||||| | |||||  ||| |||||||||||| | ||||||||| | || ||||| || ||| |||||| |||||  ||||||||||||||||||||||||    
T  16634115 taattcacttttattctaaatcatgcaactctataggtgttttgaatg-ttttgcagtgagaaatcatataaatcgacaaatcaagacatcacgtgaagg 16634213  T
Q  219 atca--aagatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagtt 300  Q
    | ||  || || |||  ||||||| ||| ||||||||||||||  ||||||| |||||||  |||| |||||||||||||||||    
T  16634214 aacaataatatgaag-tttgaagaccaatggttcttagaaggtttttgaagaaaatacaagatgaaaaaaattcatttcaagtt 16634296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 28 - 308
Target Start/End: Complemental strand, 25594830 - 25594550
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||| |||||||||||||||||||||||||||| ||| |||| || |||||| |||||||||||||||||||||||||||||  ||| |||||| || |     
T  25594830 ttttatttgcatttgaagacaaataagatgagagttagaggatttctcaatggtttgaggaacatattgtattgttttcactggagttgttgtatttcat 25594731  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--a 224  Q
    ||||| |||| || |||||||| || | ||||||| |||| |||| ||| ||| ||||||||||||  | |||| |||||||||| |||| ||||||  |    
T  25594730 ttttatcctaaatgatgcaacttcatatgtgttttgagtg-ttttatagtgagaaatcatgtaaatcgaaaaattaagacatcacatgaacgatcaagga 25594632  T
Q  225 gatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
     || ||| |||||| ||||| || | |||||||||  ||| ||| ||| |||||||||||||||||| ||||||||||||||||    
T  25594631 tatgaag-attgaatatcaatggatattagaaggtttttgtagataatgcaaagtgaagaaaattca-ttcaagttcctaggag 25594550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 28 - 308
Target Start/End: Complemental strand, 16622805 - 16622534
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||| ||| |||||||||||||||| ||  ||| ||| |||| ||||||||| |||||||||||| ||||||||| ||||||||| | ||||||||  |     
T  16622805 ttttttttacatttgaagacaaatacgaaaagagttaaaggagttgtcaatggtttgaggaacatgttgtattgtattcactctatttgttgtaatacac 16622706  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--a 224  Q
    ||||| |||||||||||||||| || |||||          ||||| || ||| ||||||||||||| ||||||||||||||||| |||||||| ||  |    
T  16622705 ttttatcctagatcatgcaacttcataggtg----------ttttgcagtgagaaatcatgtaaattgacaaatcaagacatcacatgaaggattaagga 16622616  T
Q  225 gatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
     || ||| |||||||| ||  ||||||||||||||  |||||||||||||||| ||||||||||||||||||||||| ||||||    
T  16622615 tatgaag-attgaagaccagtggttcttagaaggt-tttgaagacaatacaaattgaagaaaattcatttcaagttcgtaggag 16622534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 15205614 - 15205801
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    |||||| ||||| ||||||||| || ||||||||||||||  ||| |||| |||||| || |||||||||||||||||||||||||||||| ||||||||    
T  15205614 ttagtattttttatttgcatttaaatacaaataagatgag--ttaaaggagttgtcagtggtttgaggaacatattgtattgttttcactcgagtcgttg 15205711  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatc 209  Q
    ||||| ||||||  |||||||||||||| |||| ||||||||| |||| ||||| || ||||||| |||||||| | |||||||| |||||    
T  15205712 taattcagttttctcctagatcatgcaattccataggtgttttgagtg-ttttgcagtgaggaataatgtaaatcatcaaatcaaaacatc 15205801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 32 - 308
Target Start/End: Original strand, 24517335 - 24517603
Alignment:
Q  32 ctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagtttt 130  Q
    ||||||||||||||||||||||||||||| ||| |||| ||||||||| |||||||||||||||||||||||||||| | ||||||||||||| |  |||    
T  24517335 ctttgcatttgaagacaaataagatgagaattagaggagttgtcaatggtttgaggaacatattgtattgttttcacccgagtcgttgtaattcacattt 24517434  T
Q  131 agcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagat-ca 229  Q
    | |||  |||||| ||||||| |||||          |||||||   || ||||||||||||    ||||||| ||||||||||||||||||| ||| ||    
T  24517435 atccttaatcatgtaactccataggtg----------ttttgtaataagaaatcatgtaaatcggtaaatcaatacatcacgtgaaggatcaaggataca 24517524  T
Q  230 agaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
    |  |||| ||| ||| |||| | | |||||  || |||| |||| |||| |||||||||||||||||||||||||||||    
T  24517525 aagattgcagaccaatggttatcataaggttttttaagataatagaaagcgaagaaaattcatttcaagttcctaggag 24517603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 20 - 305
Target Start/End: Complemental strand, 17382180 - 17381901
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttg 118  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| |||| ||||||||| |||||||||||||||||||||||||||||| | ||||||    
T  17382180 ttagtacttttt-tttgcatttgaagacaaataagatgagagttagaggagttgtcaatggtttgaggaacatattgtattgttttcactcaaatcgttg 17382082  T
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 218  Q
    || || | ||||| |||| |||||||||||         || | |||| |||||||| ||| ||||||||||||   ||||||||||||| | |||||||    
T  17382081 tatttcacttttatcctaaatcatgcaact---------ttatgagtg-ttttgtagtgagaaatcatgtaaatcgtcaaatcaagacataatgtgaagg 17381992  T
Q  219 atcaaagatcaagaa--ttgaagatcaagggttcttagaaggtcgttgaagac---aatacaaagtgaagaaaattcatttcaagttcctag 305  Q
    ||||| ||| | |||  ||||||| ||| ||||||||||  ||  ||  ||||   |||||||  |||||||| ||||||||||||||||||    
T  17381991 atcaaggat-atgaagtttgaagaccaatggttcttagattgtttttcgagacattaatacaagatgaagaaagttcatttcaagttcctag 17381901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 38 - 223
Target Start/End: Original strand, 18222480 - 18222665
Alignment:
Q  38 atttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagccta 136  Q
    ||||||||||||||||||||||| ||| | || ||||||||| |||||| |||||||||||||||||| |||| |||| |||||||| | ||||| ||||    
T  18222480 atttgaagacaaataagatgagagttagatgagttgtcaatggtttgagaaacatattgtattgttttaactcgagtcattgtaattcacttttatccta 18222579  T
Q  137 gatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa 223  Q
     ||||||||| |||| ||||||||| |||| |||| |||  || ||| |||||||| ||||||||||| || |||||||| ||||||    
T  18222580 aatcatgcaaatccataggtgttttgagtg-ttttatagtaagtaattatgtaaatcaacaaatcaaggcaacacgtgaaagatcaa 18222665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 41 - 345
Target Start/End: Original strand, 25680586 - 25680881
Alignment:
Q  41 tgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagat 139  Q
    |||||||||| ||||||||| |||| ||| || |||||| |||||||||||||||||||||||||||||| ||||||||||||| | |||||  ||| ||    
T  25680586 tgaagacaaaaaagatgagagttattggatttttcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaattcaattttattctaaat 25680685  T
Q  140 catgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaagaattgaag 239  Q
    ||||||||| || |||||          ||||||||  || | ||||||||||  ||||| ||||| |||| |||||||||||| ||| |  |||| |||    
T  25680686 catgcaacttcataggtg----------ttttgtagtaagaattcatgtaaatcgacaaaccaagaaatcatgtgaaggatcaaggataagaaatttaag 25680775  T
Q  240 atcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaagatcgaaaactgga 339  Q
      |||  |||||||||||||  | ||| |||||||||||| |||||||||||||||| ||| ||||||| ||  |||| ||| ||  ||||||||| |||    
T  25680776 gccaatagttcttagaaggttttagaaaacaatacaaagtaaagaaaattcatttcaggtttctaggagtttccagacggaaaaacaatcgaaaacggga 25680875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 119 - 270
Target Start/End: Original strand, 22754963 - 22755114
Alignment:
Q  119 taatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaagg 218  Q
    ||||| ||||||| ||||||| |||||||| || ||||||||| |||||||| | || ||| |||||||||||| | ||||||||||||| ||||  |||    
T  22754963 taattcagttttatcctagattatgcaacttcataggtgttttgagtgtttt-gaagtgagaaatcatgtaaatcatcaaatcaagacataacgtacagg 22755061  T
Q  219 atcaaagatcaa-gaattgaagatcaagggttcttagaaggtcgttgaagaca 270  Q
    ||||||||| || ||||||||||||||||||||||| ||||| ||||||||||    
T  22755062 atcaaagattaatgaattgaagatcaagggttcttataaggttgttgaagaca 22755114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 28 - 302
Target Start/End: Original strand, 26070451 - 26070725
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||||||||| ||| ||||||||| |  ||||| |||| ||||||||  ||||||||| || | |||||||||||| || |||   ||||||| ||    
T  26070451 ttttctttgcattttaaggcaaataagaggtcatttagaggagttgtcaatcatttgaggaaaatttagtattgttttcattcgagttaatgtaattcag 26070550  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--a 224  Q
    ||||| | || |||||||||||||| | ||||||| ||| ||||  ||| ||| |||||||||||||  |||| ||||||||||| |||||||||||  |    
T  26070551 ttttatcataaatcatgcaactccataagtgttttgagtctttt--tagtgagaaatcatgtaaattggcaaaacaagacatcacatgaaggatcaagga 26070648  T
Q  225 gatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
     || ||| |||||||||| | ||||| || |||||  ||||||||||| |||  |  |||||||||| ||||||||||    
T  26070649 tatgaag-attgaagatctatggttcgtataaggtttttgaagacaatgcaagttagagaaaattcagttcaagttcc 26070725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 25075329 - 25075201
Alignment:
Q  148 tccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaagaattgaagatcaaggg 247  Q
    |||| ||||||||| |||||||| ||||  || |||||||||||| | ||||||||||||||| |||||||||||| ||| |||||||||||||||||||    
T  25075329 tccataggtgttttgagtgtttt-gtagtaagaaatcatgtaaatcatcaaatcaagacatcatgtgaaggatcaaggatgaagaattgaagatcaaggg 25075231  T
Q  248 ttcttagaaggtcgttgaagacaatacaaa 277  Q
    |||||| || || ||| ||||||| |||||    
T  25075230 ttcttaaaatgttgttaaagacaacacaaa 25075201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 25133298 - 25133170
Alignment:
Q  148 tccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaagaattgaagatcaaggg 247  Q
    |||| ||||||||| |||||||| ||||  || |||||||||||| | ||||||||||||||| |||||||||||| ||| |||||||||||||||||||    
T  25133298 tccataggtgttttgagtgtttt-gtagtaagaaatcatgtaaatcatcaaatcaagacatcatgtgaaggatcaaggatgaagaattgaagatcaaggg 25133200  T
Q  248 ttcttagaaggtcgttgaagacaatacaaa 277  Q
    |||||| || || ||| ||||||| |||||    
T  25133199 ttcttaaaatgttgttaaagacaacacaaa 25133170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 38 - 300
Target Start/End: Complemental strand, 7742997 - 7742735
Alignment:
Q  38 atttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagccta 136  Q
    |||||||| || |||||| |  ||||| | || ||||||||| ||||| |||||| |||||||||||||  || |||| |||||||| | ||||| ||||    
T  7742997 atttgaaggcagataagaagtcatttagacgagttgtcaatggtttgaagaacattttgtattgttttcgttcgagtctttgtaattcacttttatccta 7742898  T
Q  137 gatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatc--aagaat 234  Q
     |||||| ||   || | ||||||| ||| |||||  |  ||| |||||||||||| |  ||| ||| ||||||||||||| ||| |||||   |||| |    
T  7742897 aatcatgtaaaatcatatgtgttttgagttttttt--aatgagaaatcatgtaaatcagtaaaacaaaacatcacgtgaagaatcgaagatatgaagact 7742800  T
Q  235 tgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagtt 300  Q
     ||||||||| ||||||||||||||| |||||||||||||||||||||||||| || |||||||||    
T  7742799 -gaagatcaatggttcttagaaggtctttgaagacaatacaaagtgaagaaaaatcgtttcaagtt 7742735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 19763818 - 19763749
Alignment:
Q  233 attgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||    
T  19763818 attgaagatcaagggttcttagaaggtttttgaagataatacaaagtgaagaaaattcatttcaagttcc 19763749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 195 - 300
Target Start/End: Complemental strand, 18452783 - 18452677
Alignment:
Q  195 acaaatcaagacatcacgtgaaggatcaaagatca-agaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatt 293  Q
    ||||||||||||||||| ||| |||||||||||   | ||||||||||||| |||||||| |||||  || || ||||||||||||||||||||||||||    
T  18452783 acaaatcaagacatcacatgagggatcaaagatatgaaaattgaagatcaatggttcttataaggttttttaaaacaatacaaagtgaagaaaattcatt 18452684  T
Q  294 tcaagtt 300  Q
    |||||||    
T  18452683 tcaagtt 18452677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 195 - 301
Target Start/End: Original strand, 30072259 - 30072366
Alignment:
Q  195 acaaatcaagacatcacgtgaaggatcaaagatc--aagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcat 292  Q
    ||||||||||||||||| |||||||||||||||   |||| |||||||| || |||||||| |||||  || |||||||||||||||||||||| |||||    
T  30072259 acaaatcaagacatcacatgaaggatcaaagatatgaaga-ttgaagattaatggttcttaaaaggtttttaaagacaatacaaagtgaagaaatttcat 30072357  T
Q  293 ttcaagttc 301  Q
    |||||||||    
T  30072358 ttcaagttc 30072366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 150
Target Start/End: Original strand, 24268584 - 24268655
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactcc 150  Q
    ||||||||||||| ||||||||||||||||| |||| || ||||| | ||||| ||||||||||||||||||    
T  24268584 gtttgaggaacatcttgtattgttttcactcgagtcattataattcacttttatcctagatcatgcaactcc 24268655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 150
Target Start/End: Original strand, 24345213 - 24345284
Alignment:
Q  79 gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactcc 150  Q
    ||||||||||||| ||||||||||||||||| |||| || ||||| | ||||| ||||||||||||||||||    
T  24345213 gtttgaggaacatcttgtattgttttcactcgagtcattataattcacttttatcctagatcatgcaactcc 24345284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 24411029 - 24410836
Alignment:
Q  66 aggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaag 164  Q
    |||| ||||||||| ||||||||| || |||||||||||||| |  ||||||||||||| ||||||| |||| ||| |||||||    ||||||||| ||    
T  24411029 aggagttgtcaatggtttgaggaaaattttgtattgttttcatttgagtcgttgtaattcagttttatcctaaatcgtgcaacttgcgaggtgttttgag 24410930  T
Q  165 tgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatc--aagaattgaagatcaagggttcttagaaggt 259  Q
    | ||||  ||| ||| |||||||| ||||  ||||  |||||||||| ||||||||| | ||||  ||| ||| |||||||| |||||||| |||||    
T  24410929 tatttt--tagtgagaaatcatgtcaattggcaaaataagacatcacatgaaggatcgaggatctgaag-attcaagatcaatggttcttataaggt 24410836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 482 - 547
Target Start/End: Complemental strand, 23125611 - 23125546
Alignment:
Q  482 tttttcttgttttccaagctggatcgacggataaagcccaattttcttctcttaatccctaagtaa 547  Q
    |||| |||||||| |||| ||||||| |||||||||||||| |||| |||||||||||||||||||    
T  23125611 ttttgcttgtttttcaagttggatcggcggataaagcccaactttcctctcttaatccctaagtaa 23125546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 216
Target Start/End: Original strand, 20083480 - 20083631
Alignment:
Q  66 aggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaag 164  Q
    |||| |||||||| ||||||||||||| || ||||||||| | || |||  |||||||| |||| || |||| ||||||||| |||| ||||||||| ||    
T  20083480 aggagttgtcaatagtttgaggaacattttttattgtttttattcgagtatttgtaattcagttctatcctaaatcatgcaattccataggtgttttgag 20083579  T
Q  165 tgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaa 216  Q
    | ||||| ||| ||  ||| ||||||||   |||| ||| ||||||||||||    
T  20083580 tctttttttagtgaaaaattatgtaaatcggcaaaacaaaacatcacgtgaa 20083631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 274
Target Start/End: Original strand, 20694649 - 20694863
Alignment:
Q  60 atttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgt 158  Q
    ||||| |||| ||||||||| |||||||||| | |||||||||||||| || |||| |||||||| ||||||| || | || || ||||| || | ||||    
T  20694649 atttagaggatttgtcaatggtttgaggaactttttgtattgttttcattcgagtcattgtaattcagttttatcccaaattattcaactgcatatgtgt 20694748  T
Q  159 tttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggat--caaagatcaagaattgaagatcaagggttcttagaa 256  Q
    ||| ||| ||||  |||  || ||||||||||||   |||| ||||||||||  ||||||||  |  | || ||| ||||||||| || |||||||||||    
T  20694749 tttgagtctttt--tagtaagaaatcatgtaaatcggcaaaacaagacatcatatgaaggataacggacattaag-attgaagataaatggttcttagaa 20694845  T
Q  257 ggtcgttgaagacaatac 274  Q
    |||  |||||||||||||    
T  20694846 ggtatttgaagacaatac 20694863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 30072155 - 30072218
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaaca 90  Q
    ||||||||| ||||||||||||||||||||||| ||| |||| |||||||| ||||||||||||    
T  30072155 ttttctttggatttgaagacaaataagatgagaattagaggagttgtcaatggtttgaggaaca 30072218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 151
Target Start/End: Original strand, 19331526 - 19331612
Alignment:
Q  66 aggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactcca 151  Q
    |||| |||||||| ||||||| ||| | ||||||||| |||| || ||||||||||||||||||||| |||| ||||||||| ||||    
T  19331526 aggagttgtcaattgtttgagaaactttttgtattgtgttcattcgagtcgttgtaatttagttttatcctaaatcatgcaattcca 19331612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 165
Target Start/End: Complemental strand, 23157926 - 23157788
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||||||||||||  |||| ||| |  | ||| |||| ||||||||| |||||||||| | | |||||||||||| |  ||||||||||||| |     
T  23157926 ttttctttgcatttgaaggaaaattagaagtcaattagaggagttgtcaatggtttgaggaacttttggtattgttttcatttgagtcgttgtaattcac 23157827  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagt 165  Q
    ||||| | || ||||||||| | || |||||||||||||    
T  23157826 ttttatcataaatcatgcaaatgcataggtgttttaagt 23157788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 161
Target Start/End: Original strand, 24846239 - 24846372
Alignment:
Q  29 tttctttgcatttgaagacaaataagatgagatttataggaattgtcaat-gtttgaggaacatattgtattgttttcactctagtcgttgtaatttagt 127  Q
    ||||||||||||||||||||||||||| |  ||||| |||| || || || |||||||||| || || |||| |||||| || |||  | ||||||||||    
T  24846239 tttctttgcatttgaagacaaataagaggtcatttagaggatttttccatggtttgaggaatattttatatttttttcattcgagttatcgtaatttagt 24846338  T
Q  128 tttagcctagatcatgcaactccacaggtgtttt 161  Q
    ||   ||| | ||||||||||| |||||||||||    
T  24846339 ttcttccttgttcatgcaactctacaggtgtttt 24846372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 22967980 - 22967884
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatt 123  Q
    |||||||||||| | |||||||||||||||   |||| |||| |||| |||| |||||||||||||||||| |||||||| || ||||  |||||||    
T  22967980 ttttctttgcatgttaagacaaataagatggattttagaggagttgtgaatggtttgaggaacatattgtactgttttcattcaagtcaatgtaatt 22967884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 251 - 302
Target Start/End: Complemental strand, 18872966 - 18872915
Alignment:
Q  251 ttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||| |||||||    
T  18872966 ttagacggtagttgaagacaatacaaattgaagaaaattcatttgaagttcc 18872915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 482 - 587
Target Start/End: Original strand, 22755368 - 22755479
Alignment:
Q  482 tttttcttgttttccaagctggatcgacggataaagcccaattttcttctcttaatccctaagtaatctca--ttataa----agacccttgcacactat 575  Q
    |||| ||||||||||||||||||||   ||||||||||||||| | ||||||||| || ||||||| || |  ||||||    |||| ||||||||||||    
T  22755368 ttttgcttgttttccaagctggatcagtggataaagcccaattcttttctcttaacccataagtaacctaatgttataaatagagactcttgcacactat 22755467  T
Q  576 tttatacattca 587  Q
    ||||| ||||||    
T  22755468 tttattcattca 22755479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 16603682 - 16603608
Alignment:
Q  96 tattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttt 170  Q
    ||||||||| | || ||||||||||||| | |||||||||| ||||||||| | || ||||||||| ||||||||    
T  16603682 tattgttttgattcgagtcgttgtaattaaattttagcctaaatcatgcaatttcataggtgttttgagtgtttt 16603608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 22643824 - 22643773
Alignment:
Q  246 ggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaa 297  Q
    |||||||| |||||  ||||| |||||||||| |||||||||||||||||||    
T  22643824 ggttcttaaaaggtatttgaatacaatacaaactgaagaaaattcatttcaa 22643773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 23157736 - 23157667
Alignment:
Q  233 attgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    ||||||| |||| |||||||| |||||  || ||||||| | |||||||||||| ||||||| |||||||    
T  23157736 attgaagttcaatggttcttataaggtatttaaagacaacagaaagtgaagaaagttcatttaaagttcc 23157667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 100; Significance: 4e-49; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 28 - 308
Target Start/End: Original strand, 6173 - 6452
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||||||| ||||| || ||||||||||||||| ||||| || || |||||| ||||||||||||| |||||| ||||||||| |||| ||||||||||     
T  6173 ttttctttccatttaaacacaaataagatgagagttatatgagttttcaatggtttgaggaacataatgtattattttcactcaagtcattgtaatttac 6272  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgag-gaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaag 225  Q
    ||||| |||||| | |||| |||   ||||||| |||||| |||||||  |||  ||||||||||||  ||||||||||||||||||||||||||||| |    
T  6273 ttttatcctagagcttgcacctc--aaggtgttataagtg-ttttgtattgagaaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaagg 6369  T
Q  226 atcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
    ||    ||||||||| ||| ||||| |||||| |  ||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  6370 atatgaaattgaagaccaatggttcctagaagatttttgaagaaaatacaaagtgaagaaaaatcaattcaagttcctaggag 6452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 27 - 317
Target Start/End: Original strand, 21373 - 21664
Alignment:
Q  27 tttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaattta 125  Q
    |||||||||||||||||||| |||||||||   | ||||| ||  | | || | |||||||||| ||||||||||||||||||| ||||||||||||| |    
T  21373 tttttctttgcatttgaagaaaaataagatttaagttatatgagatctaaagggtttgaggaacttattgtattgttttcactcgagtcgttgtaattca 21472  T
Q  126 gttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa-- 223  Q
     ||||| |||| ||||||||||| || |  ||||||  ||| ||||| || ||||||||||||||||  ||||| |||||||| || |||||||||||      
T  21473 cttttatcctaaatcatgcaacttcataattgttttgggtg-ttttgcagtgaggaatcatgtaaatcgacaaaccaagacattacatgaaggatcaatg 21571  T
Q  224 agatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagac 317  Q
    | || ||| |||||||||||| ||||||||||||||  || ||||||||||||||| ||||| ||||||||||||||  |||||| || |||||    
T  21572 atatgaag-attgaagatcaatggttcttagaaggtttttaaagacaatacaaagttaagaatattcatttcaagtttataggagtttctagac 21664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 91; Significance: 9e-44; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 28 - 308
Target Start/End: Complemental strand, 27092 - 26812
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatgt-ttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    ||||||||||||||||||| |||||||||   | ||| | || ||||| |||  ||||||| || ||||||| |||||| ||| |||| ||||||||||     
T  27092 ttttctttgcatttgaagataaataagatagaagttacaagagttgtctatggattgaggagcaaattgtat-gttttcgctcaagtcattgtaatttac 26994  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaaga 226  Q
    ||||| |||| ||||| ||||| || ||||||||| |||||||  |||| ||| ||||||||||||  |||||| ||||||||||||||| |||||| ||    
T  26993 ttttatcctaaatcatacaactacataggtgttttgagtgttta-gtagtgagaaatcatgtaaatcgacaaattaagacatcacgtgaaagatcaagga 26895  T
Q  227 tca-agaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggag 308  Q
    |   | |||||||| |||| ||||||||||| ||  ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  26894 tatgaaaattgaagttcaatggttcttagaaagttcttgaagacaatacaaagtgaagaaaattcgtttcaagttcataggag 26812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 43 - 223
Target Start/End: Complemental strand, 13194 - 13014
Alignment:
Q  43 aagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatca 141  Q
    |||||||||||||||||| ||| |||| || |||||| |||| |||  |||||||||| ||| ||| | ||| |||| |||| | ||||| |||| || |    
T  13194 aagacaaataagatgagagttagaggatttttcaatggtttgtggattatattgtattctttccacacgagttgttggaattcacttttatcctaaatta 13095  T
Q  142 tgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa 223  Q
    |||||||||||||||||||| |||||||| |||| ||||||||||||||||  ||||||||||||||||| |||||||||||    
T  13094 tgcaactccacaggtgttttgagtgtttt-gtagtgaggaatcatgtaaatcgacaaatcaagacatcacatgaaggatcaa 13014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 28 - 345
Target Start/End: Complemental strand, 8847 - 8529
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatgttt-gaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||| ||| ||||| |||| ||||||||||||  ||| |||| ||||||||| || |||||   ||||||||||||||||||| | | || |||||| |     
T  8847 ttttattttcattttaagaaaaataagatgagggttagaggatttgtcaatggttagaggattgtattgtattgttttcactcgacttgtagtaattcac 8748  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--a 224  Q
    ||||| |||| ||  |||||||||| |  |||||| | |||||| |||| ||||||||||||||||  |||||||||||||| |  |||||||||||  |    
T  8747 ttttatcctaaattgtgcaactccatatatgttttgaatgtttt-gtagtgaggaatcatgtaaatcgacaaatcaagacataaaatgaaggatcaagga 8649  T
Q  225 gatcaagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaa 324  Q
     || |||  || ||||  ||   | |||| |||||  |||||||||||||||  ||||| ||||||||||| |||||||||||  ||| | || ||||||    
T  8648 aataaag-tttaaagacaaatattccttaaaaggtttttgaagacaatacaagatgaaggaaattcatttcgagttcctaggaattttcaaacggaagaa 8550  T
Q  325 agatcgaaaactggatgaaaa 345  Q
     |||||||||| ||| |||||    
T  8549 cgatcgaaaacgggacgaaaa 8529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 233 - 345
Target Start/End: Original strand, 7801 - 7913
Alignment:
Q  233 attgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaagatcgaa 332  Q
    |||||||  ||| |||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||| ||| |||| |||||| |||||||    
T  7801 attgaaggccaatggttcttagaaggttgttgaagacagtacaaagtcaagaaaattcatttcaagttcctaggagttttcagacggaagaatgatcgaa 7900  T
Q  333 aactggatgaaaa 345  Q
    ||||||| |||||    
T  7901 aactggacgaaaa 7913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 136 - 294
Target Start/End: Original strand, 447062 - 447219
Alignment:
Q  136 agatcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaagaatt 235  Q
    ||||||||| |||||| ||| ||||| |||||||| | || |||||||||||||||| |  |||||||||||||| |||||||||||| ||| || ||||    
T  447062 agatcatgccactccataggcgttttgagtgtttt-gaagtgaggaatcatgtaaatcattaaatcaagacatcatgtgaaggatcaaggatgaaaaatt 447160  T
Q  236 gaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcattt 294  Q
    |||||||||  |||||||  ||||   ||||||||||||||||||||||||||| ||||    
T  447161 gaagatcaaaagttcttaacaggttactgaagacaatacaaagtgaagaaaattgattt 447219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 446974 - 447058
Alignment:
Q  20 ttagtactttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttt 103  Q
    ||||||||||| |||| |||||||||||||||||||||||| |   |||||||||  ||| ||| ||||||||||||||||||||    
T  446974 ttagtacttttcctttacatttgaagacaaataagatgagagtctgaggaattgttgatgattttaggaacatattgtattgttt 447058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 80 - 302
Target Start/End: Complemental strand, 228269 - 228050
Alignment:
Q  80 tttgaggaacatattgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaactccacaggtgttttaagtgtttttgtagcgag 179  Q
    |||| ||||||| ||  |||||||||| || ||||||||||||| | ||||| | || |||||||||| | | | ||||| || ||   ||| ||| |||    
T  228269 tttgtggaacattttaaattgttttcattcgagtcgttgtaattcatttttatcataaatcatgcaaccctaaaagtgttgtatgt---tttatagtgag 228173  T
Q  180 gaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatcaagaat--tgaagatcaagggttcttagaaggtcgttgaagacaatacaaa 277  Q
     ||||||||||||  ||||||||||||||||||||||||||| |   | | ||||  |||||| ||| ||||||||||||||  ||||||||||||||||    
T  228172 aaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcgagtgt-atgaatattgaaga-caatggttcttagaaggtatttgaagacaatacaaa 228075  T
Q  278 gtgaagaaaattcatttcaagttcc 302  Q
    |||||||||||||||||||||||||    
T  228074 gtgaagaaaattcatttcaagttcc 228050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 170 - 335
Target Start/End: Complemental strand, 5765 - 5600
Alignment:
Q  170 ttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaagatc--aagaattgaagatcaagggttcttagaaggtcgttgaag 267  Q
    |||||| ||| ||||||||||||| |||||| |||||||||| ||||||||| | |||   |||| |||||  |||| ||||||||||||||| || |||    
T  5765 ttgtagtgagaaatcatgtaaattgacaaataaagacatcacatgaaggatcgaggatatgaaga-ttgaat-tcaatggttcttagaaggtctttaaag 5668  T
Q  268 acaatacaaagtgaagaaaattcatttcaagttcctaggagattttagaccgaagaaagatcgaaaac 335  Q
    | |||||||||||||||||||||| ||||||||  |||||| ||| |||| |||||| ||||||||||    
T  5667 aaaatacaaagtgaagaaaattcaattcaagtttgtaggagttttcagacggaagaacgatcgaaaac 5600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 138 - 302
Target Start/End: Original strand, 1896 - 2059
Alignment:
Q  138 atcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--agatcaagaatt 235  Q
    |||||||||||||| ||||||||| || ||||| |||| ||| |||| ||||||| |||||||||||||||||||||||||||  |  | || ||| |||    
T  1896 atcatgcaactccataggtgttttgagagtttt-gtagtgagaaatcctgtaaatcaacaaatcaagacatcacgtgaaggattgacgatatgaag-att 1993  T
Q  236 gaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    ||||| ||| |||| ||||||| |   |||||| |||||||||||||||||||| ||||||||||||    
T  1994 gaaga-caatggttgttagaagttttatgaagaaaatacaaagtgaagaaaatttatttcaagttcc 2059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 138 - 302
Target Start/End: Original strand, 12332 - 12495
Alignment:
Q  138 atcatgcaactccacaggtgttttaagtgtttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaa--agatcaagaatt 235  Q
    |||||||||||||| ||||||||| |||||||| |||| ||| ||||||||||||  ||||||||||||||||||||||||||  |  | || ||| ||     
T  12332 atcatgcaactccataggtgttttgagtgtttt-gtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggattgacgatatgaag-atc 12429  T
Q  236 gaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    ||||| ||| |||| ||||||| |   |||||| |||||||||||||||||||| ||||||||||||    
T  12430 gaaga-caatggttgttagaagttttatgaagaaaatacaaagtgaagaaaatttatttcaagttcc 12495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 197 - 307
Target Start/End: Complemental strand, 22582 - 22472
Alignment:
Q  197 aaatcaagacatcacgtgaaggatcaaagatc--aagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcattt 294  Q
    ||||||||||||||||||||| ||||| |||   |||||| |||| |||| ||||| ||||||||  || |||||||||||| |||||||||||||||||    
T  22582 aaatcaagacatcacgtgaagaatcaaggatatgaagaat-gaag-tcaatggttcatagaaggttttttaagacaatacaaggtgaagaaaattcattt 22485  T
Q  295 caagttcctagga 307  Q
    |||||||||||||    
T  22484 caagttcctagga 22472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 22632 - 22596
Alignment:
Q  78 tgtttgaggaacatattgtattgttttcactctagtc 114  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  22632 tgtttgagtaacatattgtattgttttcactcgagtc 22596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 28 - 299
Target Start/End: Complemental strand, 11835 - 11564
Alignment:
Q  28 ttttctttgcatttgaagacaaataagatgagatttataggaattgtcaatg-tttgaggaacatattgtattgttttcactctagtcgttgtaatttag 126  Q
    |||| ||||||||||||| ||||  ||| |  ||||| |||| ||||||||| ||||| |||| | |||||| ||||||| |  | ||||||||||| ||    
T  11835 ttttatttgcatttgaaggcaaaatagaagtcatttagaggagttgtcaatgatttgatgaactttttgtatagttttcatttgaatcgttgtaattcag 11736  T
Q  127 ttttagcctagatcatgcaactccacaggtgttttaagtgttttt-gtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaaag 225  Q
    ||||  |||| ||||||||||| ||  |||||||| ||| ||||  ||| |||  ||||||||||||  ||||| |||||||||| || ||||||  |      
T  11735 ttttgtcctaaatcatgcaactacatgggtgttttgagtcttttccgta-cga--aatcatgtaaatcgacaaaacaagacatcaagttaaggattgaga 11639  T
Q  226 atc--aagaattgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagt 299  Q
    ||   |||| ||||| ||||| | |||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  11638 atttgaaga-ttgaatatcaatgattcttataaggtatttgaagacaatacaaagtgaagaaaattcatttcaagt 11564  T

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Target: scaffold0103 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 487 - 636
Target Start/End: Complemental strand, 37278 - 37123
Alignment:
Q  487 cttgttttccaagctggatcgacggataaagcccaattttcttctcttaatccctaagtaatctcat--tataaa----gacccttgcacactattttat 580  Q
    |||||||| |||||||||||| ||||||||| | | |||||||||||||| ||| ||| ||  ||||  ||||||    ||||||||||| |||||||||    
T  37278 cttgttttgcaagctggatcggcggataaagactagttttcttctcttaaaccccaagcaacatcatgctataaatagagacccttgcacgctattttat 37179  T
Q  581 acattcacaaaaatttgacggggaaggtaaacgtcaagcatcagagttccaaggca 636  Q
     |||| | |||   ||||||| ||||| ||  ||||||||||||||| ||||||||    
T  37178 tcatttagaaatgattgacggtgaaggcaagggtcaagcatcagagtaccaaggca 37123  T

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Target: scaffold1149 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 1998 - 2038
Alignment:
Q  262 ttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  1998 ttgaagacaatacaaagtaaagaaaattcatttcaagttcc 2038  T

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Target: scaffold1026 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 1905 - 1850
Alignment:
Q  93 ttgtattgttttcactctagtcgttgtaatttagttttagcctagatcatgcaact 148  Q
    |||||||||||||| ||||||| ||||||| |||||||| |||| || ||||||||    
T  1905 ttgtattgttttcattctagtcattgtaatctagttttatcctaaattatgcaact 1850  T

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Target: scaffold1026; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 1733 - 1701
Alignment:
Q  262 ttgaagacaatacaaagtgaagaaaattcattt 294  Q
    |||| ||||||||||||||||||||||||||||    
T  1733 ttgatgacaatacaaagtgaagaaaattcattt 1701  T

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Target: scaffold0185 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 2684 - 2751
Alignment:
Q  235 tgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 302  Q
    |||||||||| |||||||| |||    |||||||||||||| ||||||||||| |||||||| |||||    
T  2684 tgaagatcaatggttcttataagacatttgaagacaatacagagtgaagaaaactcatttcatgttcc 2751  T

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Target: scaffold0836 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 2819 - 2851
Alignment:
Q  262 ttgaagacaatacaaagtgaagaaaattcattt 294  Q
    |||| ||||||||||||||||||||||||||||    
T  2819 ttgatgacaatacaaagtgaagaaaattcattt 2851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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