View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15932_low_43 (Length: 381)

Name: NF15932_low_43
Description: NF15932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15932_low_43
NF15932_low_43
[»] chr4 (11 HSPs)
chr4 (5-237)||(18731314-18731546)
chr4 (5-237)||(18723895-18724127)
chr4 (5-237)||(18699210-18699442)
chr4 (5-237)||(18679377-18679609)
chr4 (5-234)||(18655290-18655519)
chr4 (274-381)||(18723751-18723858)
chr4 (274-381)||(18731170-18731277)
chr4 (274-381)||(18655143-18655250)
chr4 (274-380)||(18699067-18699173)
chr4 (274-364)||(18679250-18679340)
chr4 (281-381)||(18074170-18074271)
[»] chr1 (6 HSPs)
chr1 (5-237)||(268167-268399)
chr1 (5-217)||(28127509-28127721)
chr1 (5-217)||(28164193-28164404)
chr1 (274-381)||(268022-268130)
chr1 (315-377)||(28164038-28164100)
chr1 (315-363)||(28127352-28127400)
[»] chr6 (61 HSPs)
chr6 (1-231)||(26646607-26646837)
chr6 (1-231)||(26752575-26752805)
chr6 (1-237)||(26656117-26656353)
chr6 (1-237)||(26762088-26762324)
chr6 (32-211)||(26056085-26056264)
chr6 (32-211)||(26076055-26076234)
chr6 (5-231)||(25579851-25580080)
chr6 (5-232)||(27337893-27338120)
chr6 (5-232)||(27398633-27398860)
chr6 (5-231)||(26142997-26143226)
chr6 (5-237)||(25538672-25538907)
chr6 (7-217)||(26823974-26824184)
chr6 (1-233)||(28786406-28786638)
chr6 (1-217)||(28792527-28792743)
chr6 (1-217)||(28781267-28781483)
chr6 (112-233)||(28781378-28781499)
chr6 (5-90)||(26623108-26623193)
chr6 (5-90)||(26729086-26729171)
chr6 (83-211)||(25481952-25482080)
chr6 (313-381)||(27604376-27604444)
chr6 (281-381)||(27427284-27427385)
chr6 (277-381)||(26802850-26802955)
chr6 (5-211)||(27718228-27718434)
chr6 (286-374)||(28781516-28781606)
chr6 (286-374)||(28786655-28786743)
chr6 (286-374)||(28792776-28792864)
chr6 (122-211)||(27214669-27214758)
chr6 (122-211)||(27234470-27234559)
chr6 (1-58)||(27593022-27593079)
chr6 (5-108)||(26048977-26049080)
chr6 (5-108)||(26070146-26070249)
chr6 (286-381)||(26646892-26646989)
chr6 (286-381)||(26752860-26752957)
chr6 (16-217)||(26861756-26861957)
chr6 (5-94)||(27724811-27724900)
chr6 (119-171)||(26617868-26617920)
chr6 (119-171)||(26723796-26723848)
chr6 (277-374)||(27592698-27592799)
chr6 (277-374)||(27679354-27679455)
chr6 (181-231)||(26884473-26884523)
chr6 (5-59)||(27611003-27611057)
chr6 (119-217)||(28297556-28297654)
chr6 (119-217)||(28514419-28514517)
chr6 (119-171)||(26811755-26811807)
chr6 (29-77)||(28139697-28139745)
chr6 (5-92)||(26937226-26937313)
chr6 (114-217)||(26949902-26950005)
chr6 (313-371)||(27706084-27706145)
chr6 (1-59)||(26802570-26802628)
chr6 (305-359)||(26824240-26824294)
chr6 (1-59)||(27531198-27531256)
chr6 (5-59)||(27679078-27679132)
chr6 (17-91)||(29826171-29826245)
chr6 (83-192)||(25506852-25506961)
chr6 (1-54)||(27604711-27604764)
chr6 (337-374)||(27677294-27677331)
chr6 (336-381)||(27698256-27698301)
chr6 (139-216)||(28325743-28325820)
chr6 (325-381)||(25483513-25483569)
chr6 (122-226)||(26959415-26959519)
chr6 (313-381)||(31284714-31284781)
[»] chr8 (1 HSPs)
chr8 (5-234)||(29273596-29273825)
[»] scaffold0277 (4 HSPs)
scaffold0277 (5-233)||(4498-4726)
scaffold0277 (1-233)||(13459-13691)
scaffold0277 (286-374)||(4391-4481)
scaffold0277 (286-374)||(13352-13442)
[»] scaffold0419 (3 HSPs)
scaffold0419 (112-233)||(7764-7885)
scaffold0419 (286-374)||(7902-7992)
scaffold0419 (1-59)||(7653-7711)
[»] scaffold0003 (1 HSPs)
scaffold0003 (281-381)||(59978-60079)
[»] scaffold0349 (2 HSPs)
scaffold0349 (5-94)||(14322-14411)
scaffold0349 (134-211)||(3269-3346)
[»] scaffold0038 (1 HSPs)
scaffold0038 (139-216)||(117058-117135)
[»] chr2 (1 HSPs)
chr2 (137-217)||(3279967-3280047)


Alignment Details
Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 5 - 237
Target Start/End: Complemental strand, 18731546 - 18731314
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcacta 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18731546 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcacta 18731447  T
Q  105 agcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattt 204  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  18731446 agcacaaaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttggctctgaccgaagctgctaacttgtccggctaccattt 18731347  T
Q  205 tagtcctgggtactcctctttacttaattcttg 237  Q
    ||||| |||||||||||||||||||||||||||    
T  18731346 tagtcatgggtactcctctttacttaattcttg 18731314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 5 - 237
Target Start/End: Complemental strand, 18724127 - 18723895
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcacta 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18724127 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacaccaaagtgggagttatggtgaacatctcacta 18724028  T
Q  105 agcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattt 204  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  18724027 agcacaaaatgagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttggctctgaccgaagctgctaacttgtccggctaccattt 18723928  T
Q  205 tagtcctgggtactcctctttacttaattcttg 237  Q
    |||||||||||||||||||||||||||||||||    
T  18723927 tagtcctgggtactcctctttacttaattcttg 18723895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 5 - 237
Target Start/End: Complemental strand, 18699442 - 18699210
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcacta 104  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18699442 tgctacaagacaaaaggtcgtctcgttttgcctgttttctatggcgtagatcctactcacatacgacatcaaagtgggagttatggtgaacatctcacta 18699343  T
Q  105 agcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattt 204  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18699342 agcacggaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccgaagctgctaacttgtccggctaccattt 18699243  T
Q  205 tagtcctgggtactcctctttacttaattcttg 237  Q
    |||| ||||||||||||||||||||||||||||    
T  18699242 tagttctgggtactcctctttacttaattcttg 18699210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 5 - 237
Target Start/End: Complemental strand, 18679609 - 18679377
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcacta 104  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  18679609 tgctacaagacaaagggtcgtcttgttttgcctgttttctatgtcgtggatcctactcacatatgacatcaaagtggtagttatggtgaacatctcacta 18679510  T
Q  105 agcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattt 204  Q
    | ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18679509 atcactgaaagagtttccaaaataacaataaaaacatggagcggttgcatcaatggaagttagctctgaccgaagctgctaacttgtccggctaccattt 18679410  T
Q  205 tagtcctgggtactcctctttacttaattcttg 237  Q
    |||||||||||||||||||||||||||||||||    
T  18679409 tagtcctgggtactcctctttacttaattcttg 18679377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 5 - 234
Target Start/End: Complemental strand, 18655519 - 18655290
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcacta 104  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||    
T  18655519 tgctacaagacaaagggtcgtctcgtttttcctgttttctatggcgtggatcctactcacatacgacatcaaactggaagttatggtgaacatctcacta 18655420  T
Q  105 agcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattt 204  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||     
T  18655419 agcacagaaagaatttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttggctctgaccgaagctgctaacttgtccggctaccattc 18655320  T
Q  205 tagtcctgggtactcctctttacttaattc 234  Q
    |||||||||||||||||||| |||||||||    
T  18655319 tagtcctgggtactcctcttcacttaattc 18655290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 274 - 381
Target Start/End: Complemental strand, 18723858 - 18723751
Alignment:
Q  274 cctcaataataccatcttaaagcctaaattggaaacacctttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgta 373  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18723858 cctcagtaataccatcttaaagcctaaattggaaacacctttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgta 18723759  T
Q  374 tgatatat 381  Q
    ||||||||    
T  18723758 tgatatat 18723751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 274 - 381
Target Start/End: Complemental strand, 18731277 - 18731170
Alignment:
Q  274 cctcaataataccatcttaaagcctaaattggaaacacctttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgta 373  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18731277 cctcaataataccatcttaaagcctaaattggaaacacctttttttttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgta 18731178  T
Q  374 tgatatat 381  Q
    ||||||||    
T  18731177 tgatatat 18731170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 274 - 381
Target Start/End: Complemental strand, 18655250 - 18655143
Alignment:
Q  274 cctcaataataccatcttaaagcctaaattggaaacacctttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgta 373  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18655250 cctcaatgataccatcttaaagcctaaattcgaaacacctttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgta 18655151  T
Q  374 tgatatat 381  Q
    ||||||||    
T  18655150 tgatatat 18655143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 274 - 380
Target Start/End: Complemental strand, 18699173 - 18699067
Alignment:
Q  274 cctcaataataccatcttaaagcctaaattggaaacacctttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgta 373  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18699173 cctcaatgataccatcttaaagcctaaattggaaacacctttttaattacgtttttaaacaagtattagttatttataagtcaaaatagttagaaatgta 18699074  T
Q  374 tgatata 380  Q
    |||||||    
T  18699073 tgatata 18699067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 364
Target Start/End: Complemental strand, 18679340 - 18679250
Alignment:
Q  274 cctcaataataccatcttaaagcctaaattggaaacacctttttatttacatttttaaacaagtattagttatttataagtcaaaatagtt 364  Q
    |||||||||||||| |  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18679340 cctcaataataccaaccgaaagcctaaattggaaacacctttttatttacgtttttaaacaagtattagttatttataagtcaaaatagtt 18679250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 281 - 381
Target Start/End: Original strand, 18074170 - 18074271
Alignment:
Q  281 aataccatcttaaagcctaaattggaaacaccttttt-atttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatgatat 379  Q
    ||||||||||||||||||||||  | ||||||||||| |||||  ||||||||||| | ||||||||||||| ||||||||||||| |||||||| ||||    
T  18074170 aataccatcttaaagcctaaatgtgtaacaccttttttatttatgtttttaaacaattgttagttatttatatgtcaaaatagttaaaaatgtataatat 18074269  T
Q  380 at 381  Q
    ||    
T  18074270 at 18074271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 161; Significance: 9e-86; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 5 - 237
Target Start/End: Complemental strand, 268399 - 268167
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcacta 104  Q
    |||||||||| ||||||||||||  ||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  268399 tgctacaagaaaaagggtcgtctcattttgcccgtcttctatggcgtggatcctactcacatacgacatcaaagtgggagttatggtgaacatctcacta 268300  T
Q  105 agcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattt 204  Q
    |||||  | ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||| ||||||||||     
T  268299 agcacgaagagagtttccaaaatagcaagaaaaacatggagcggttgcatcaatggaagttggctctgacccaagcttctaacttgtctggctaccattc 268200  T
Q  205 tagtcctgggtactcctctttacttaattcttg 237  Q
    ||||| |||||||| ||||||||||||||||||    
T  268199 tagtcgtgggtactgctctttacttaattcttg 268167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 5 - 217
Target Start/End: Complemental strand, 28127721 - 28127509
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcacta 104  Q
    |||||||||||||||||||| || |||||||||||||||| |||||||||||||| | |  | ||| |||| |  ||||||||||||||| | ||  |||    
T  28127721 tgctacaagacaaagggtcgcctagttttgcctgttttctttggcgtggatcctactgatgtgcgatatcatacagggagttatggtgaagagcttgcta 28127622  T
Q  105 agcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattt 204  Q
    ||||  || |||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||  |||||||||||||||||||||||||||     
T  28127621 agcatggagagaggttccaaaataacaagaaaaacatggagcgattgcaccaatggaagatagctctaacccaagctgctaacttgtccggctaccatta 28127522  T
Q  205 tagtcctgggtac 217  Q
    |||||| ||||||    
T  28127521 tagtccagggtac 28127509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 5 - 217
Target Start/End: Complemental strand, 28164404 - 28164193
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcacta 104  Q
    |||||||||||||||||||| || |||||||||||||||| |||||||||||||| | |  | |||||||| |  |||||||||||  || |||| ||||    
T  28164404 tgctacaagacaaagggtcgcctagttttgcctgttttct-tggcgtggatcctactgatgtgcgacatcatacagggagttatggcaaagatcttacta 28164306  T
Q  105 agcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattt 204  Q
    ||||  |  |||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||  |||||||||||||||||||||||||||     
T  28164305 agcatggtgagaggttccaaaataacaagaaaaacatggagcgattgcaccaatggaagatagctctaacccaagctgctaacttgtccggctaccatta 28164206  T
Q  205 tagtcctgggtac 217  Q
    |||||| ||||||    
T  28164205 tagtccagggtac 28164193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 274 - 381
Target Start/End: Complemental strand, 268130 - 268022
Alignment:
Q  274 cctcaataataccatcttaaagcctaaattggaaacaccttttt-atttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgt 372  Q
    |||| |||||||||||||||| | ||||| |  || |||||||| |||||| ||| |||| ||||||||||| |||||| | | ||||||||||||| ||    
T  268130 cctcgataataccatcttaaaccataaatggctaaaaccttttttatttacgtttctaaataagtattagttgtttatatgacgaaatagttagaaacgt 268031  T
Q  373 atgatatat 381  Q
    || ||||||    
T  268030 ataatatat 268022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 377
Target Start/End: Complemental strand, 28164100 - 28164038
Alignment:
Q  315 tttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatgat 377  Q
    ||||||||  ||||||||||||||| || |||||||| |||||||||||||||  ||||||||    
T  28164100 tttatttatgtttttaaacaagtataagatatttatatgtcaaaatagttagagttgtatgat 28164038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 363
Target Start/End: Complemental strand, 28127400 - 28127352
Alignment:
Q  315 tttatttacatttttaaacaagtattagttatttataagtcaaaatagt 363  Q
    ||||||||  ||||||||||||||| || |||||||| |||||||||||    
T  28127400 tttatttatgtttttaaacaagtataaggtatttatatgtcaaaatagt 28127352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 159; Significance: 1e-84; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 26646607 - 26646837
Alignment:
Q  1 tcattgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctc 100  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||    
T  26646607 tcattgctacaagacaaagggtcgtctcgttttgcccgttttctatggcgtggatcctactcagatacggcatcaaagtgggagttatggtgaacatctc 26646706  T
Q  101 actaagcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctacc 200  Q
    |||||||||  | ||||||||||||||||||||||||||| ||| || ||||||||||||||||| ||||||||  ||||||||||||||||||| ||||    
T  26646707 actaagcacgaagagagtttccaaaataacaagaaaaacaaggaacgattgcatcaatggaagttggctctgacccaagctgctaacttgtccggatacc 26646806  T
Q  201 attttagtcctgggtactcctctttacttaa 231  Q
    ||| ||||||||||||| || ||||||||||    
T  26646807 attatagtcctgggtaccccactttacttaa 26646837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 26752575 - 26752805
Alignment:
Q  1 tcattgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctc 100  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||    
T  26752575 tcattgctacaagacaaagggtcgtctcgttttgcccgttttctatggcgtggatcctactcagatacggcatcaaagtgggagttatggtgaacatctc 26752674  T
Q  101 actaagcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctacc 200  Q
    |||||||||  | ||||||||||||||||||||||||||| ||| || ||||||||||||||||| ||||||||  ||||||||||||||||||| ||||    
T  26752675 actaagcacgaagagagtttccaaaataacaagaaaaacaaggaacgattgcatcaatggaagttggctctgacccaagctgctaacttgtccggatacc 26752774  T
Q  201 attttagtcctgggtactcctctttacttaa 231  Q
    ||| ||||||||||||| || ||||||||||    
T  26752775 attatagtcctgggtaccccactttacttaa 26752805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 26656117 - 26656353
Alignment:
Q  1 tcattgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctc 100  Q
    ||||||||| |||||||||||| ||   |||||||||||||||||||| |||||||||| ||||||||||||||| | ||| ||||| ||||| |||||     
T  26656117 tcattgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcacatacgacatcagactggaagttacggtgagcatctt 26656216  T
Q  101 actaagcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctacc 200  Q
    ||||||||   |||||  ||||||||||||||| |||||||| || ||||| | ||||||||| | ||||||||  ||||||| |||||||| |||||||    
T  26656217 actaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctctgaccaaagctgccaacttgtctggctacc 26656316  T
Q  201 attttagtcctgggtactcctctttacttaattcttg 237  Q
    ||| |||||  |||||| || |||||||||| |||||    
T  26656317 attgtagtcaagggtaccccactttacttaaatcttg 26656353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 26762088 - 26762324
Alignment:
Q  1 tcattgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctc 100  Q
    ||||||||| |||||||||||| ||   |||||||||||||||||||| |||||||||| ||||||||||||||| | ||| ||||| ||||| |||||     
T  26762088 tcattgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcacatacgacatcagactggaagttacggtgagcatctt 26762187  T
Q  101 actaagcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctacc 200  Q
    ||||||||   |||||  ||||||||||||||| |||||||| || ||||| | ||||||||| | ||||||||  ||||||| |||||||| |||||||    
T  26762188 actaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctctgaccaaagctgccaacttgtctggctacc 26762287  T
Q  201 attttagtcctgggtactcctctttacttaattcttg 237  Q
    ||| |||||  |||||| || |||||||||| |||||    
T  26762288 attgtagtcaagggtaccccactttacttaaatcttg 26762324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 211
Target Start/End: Original strand, 26056085 - 26056264
Alignment:
Q  32 ttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacagaaagagtttccaaaataaca 131  Q
    ||||| ||||||||||  ||||| |||| ||||||||||||||| ||||||||||||||||| ||||| |||||||| | | || | ||||||||||||     
T  26056085 ttgcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcatcttactaagcataaagaggggttccaaaataacg 26056184  T
Q  132 agaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcct 211  Q
    |||||||||||||||| |||| |||||||||| | ||||| ||| |||||||||||||||||||||| |||| |||||||    
T  26056185 agaaaaacatggagcgattgcgtcaatggaagatggctcttactcaagctgctaacttgtccggctatcattatagtcct 26056264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 211
Target Start/End: Original strand, 26076055 - 26076234
Alignment:
Q  32 ttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacagaaagagtttccaaaataaca 131  Q
    ||||| ||||||||||  ||||| |||| ||||||||||||||| ||||||||||||||||| ||||| |||||||| | | || | ||||||||||||     
T  26076055 ttgcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcatcttactaagcataaagaggggttccaaaataacg 26076154  T
Q  132 agaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcct 211  Q
    |||||||||||||||| |||| |||||||||| | ||||| ||| |||||||||||||||||||||| |||| |||||||    
T  26076155 agaaaaacatggagcgattgcgtcaatggaagatggctcttactcaagctgctaacttgtccggctatcattatagtcct 26076234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 231
Target Start/End: Original strand, 25579851 - 25580080
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcacta 104  Q
    ||||||||||||||| || |  | || ||||| ||||||||||  ||||| |||| ||||||||||||||| |||||||||||||||||  |||| ||||    
T  25579851 tgctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagtatcttacta 25579950  T
Q  105 agcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattt 204  Q
    ||||   | |||| || ||||||||| |||||||||||||||| |||| |||||||||| ||||||| ||  |||||||||||||||||||||| ||||     
T  25579951 agcatgaagagaggtttcaaaataacgagaaaaacatggagcgattgcgtcaatggaagatagctcttacccaagctgctaacttgtccggctatcatta 25580050  T
Q  205 tagtcc---tgggtactcctctttacttaa 231  Q
    ||||||   ||||||| || ||||||||||    
T  25580051 tagtcctcatgggtaccccactttacttaa 25580080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 5 - 232
Target Start/End: Complemental strand, 27338120 - 27337893
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcacta 104  Q
    ||||||||||||| |||| ||   |||||||||||||||||||| | |||||||| |||| |||||||||| | ||||||||||||||| ||||| ||||    
T  27338120 tgctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactcacgtacgacatcagactgggagttatggtgagcatcttacta 27338021  T
Q  105 agcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattt 204  Q
    ||||   | | |  ||||||||||||||| ||||||||||| ||||| |  |||||||| | ||||| ||  ||||||||||||| |||||| |||||||    
T  27338020 agcatgaagataagttccaaaataacaaggaaaacatggagaggttgaagaaatggaagatggctcttacccaagctgctaacttctccggccaccattt 27337921  T
Q  205 tagtcctgggtactcctctttacttaat 232  Q
    |||||  |||||| || |||||||||||    
T  27337920 tagtcaagggtaccccactttacttaat 27337893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 5 - 232
Target Start/End: Complemental strand, 27398860 - 27398633
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcacta 104  Q
    ||||||||||||| |||| ||   |||||||||||||||||||| | |||||||| |||| |||||||||| | ||||||||||||||| ||||| ||||    
T  27398860 tgctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactcacgtacgacatcagactgggagttatggtgagcatcttacta 27398761  T
Q  105 agcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattt 204  Q
    ||||   | | |  ||||||||||||||| ||||||||||| ||||| |  |||||||| | ||||| ||  ||||||||||||| |||||| |||||||    
T  27398760 agcatgaagataagttccaaaataacaaggaaaacatggagaggttgaagaaatggaagatggctcttacccaagctgctaacttctccggccaccattt 27398661  T
Q  205 tagtcctgggtactcctctttacttaat 232  Q
    |||||  |||||| || |||||||||||    
T  27398660 tagtcaagggtaccccactttacttaat 27398633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 5 - 231
Target Start/End: Original strand, 26142997 - 26143226
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcacta 104  Q
    ||||||||||||||| || |  | || || || ||||||||||  ||||| |||| |||||||||| |||| ||||||| ||||||||| ||||| ||||    
T  26142997 tgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcagagtgggatttatggtgagcatcttacta 26143096  T
Q  105 agcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattt 204  Q
    ||||   | |||| || ||||||||| |||||||||||||||| |||| |||||||||| ||||||| |   |||||||||||||||||||||| ||||     
T  26143097 agcatgaagagaggtttcaaaataacgagaaaaacatggagcgattgcgtcaatggaagatagctcttatccaagctgctaacttgtccggctatcatta 26143196  T
Q  205 tagtcc---tgggtactcctctttacttaa 231  Q
    ||||||   ||||||| || ||||||||||    
T  26143197 tagtcctcatgggtaccccactttacttaa 26143226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 5 - 237
Target Start/End: Original strand, 25538672 - 25538907
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcacta 104  Q
    ||||||||||||||| || |  | || ||||| ||||||||||  ||||| |||| |||  |||||||||| ||||||||||||||||| ||| | ||||    
T  25538672 tgctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcagttacgacatcagagtgggagttatggtgagcattttacta 25538771  T
Q  105 agcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattt 204  Q
    ||||   | |||| || ||||||||  |||||||||||||||| |||| |||||||||| ||||||| |   |||||||||||||||||||||| ||||     
T  25538772 agcatgaagagaggtttcaaaataatgagaaaaacatggagcgattgcgtcaatggaagatagctcttatccaagctgctaacttgtccggctatcatta 25538871  T
Q  205 tagtcc---tgggtactcctctttacttaattcttg 237  Q
    ||||||   ||||||| || |||||||||| |||||    
T  25538872 tagtcctcatgggtaccccactttacttaaatcttg 25538907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 7 - 217
Target Start/End: Original strand, 26823974 - 26824184
Alignment:
Q  7 ctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaag 106  Q
    |||||||  |||||| || || |||||||||||||||||||| ||||||||| || |||||||||||||  |||||||||||| |  |||||||||||||    
T  26823974 ctacaaggaaaaggggcgcctcgttttgcctgttttctatggtgtggatcctggtgacatacgacatcagcgtgggagttatgctatacatctcactaag 26824073  T
Q  107 cacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccatttta 206  Q
    ||   |||||| |||  |||||||||| |||||||||||   |||| ||||||||||   |||||||   |||||||| ||||||| ||||  |||||||    
T  26824074 catgaaaagaggttcggaaataacaaggaaaacatggagaaattgcttcaatggaagaaggctctgaaacaagctgctgacttgtctggctttcatttta 26824173  T
Q  207 gtcctgggtac 217  Q
    ||| |||||||    
T  26824174 gtcttgggtac 26824184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 28786406 - 28786638
Alignment:
Q  1 tcattgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catct 99  Q
    |||||||||||||||||| ||||| || |||||||||||||||| ||| || ||||||| | |  | |||||||| |  ||  ||||||||||| ||| |    
T  28786406 tcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtcgatcctactaatgtgcgacatcatacaggtcgttatggtgaagcat-t 28786504  T
Q  100 cactaagcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctac 199  Q
      ||  |||   |||||| || |||||| | ||| | ||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  28786505 ggctgggcatgaaaagaggtttcaaaatgataaggataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctac 28786604  T
Q  200 cattttagtcctgggtactcctctttacttaatt 233  Q
    |||| |||||||||||||  || |||||||||||    
T  28786605 cattctagtcctgggtacgactatttacttaatt 28786638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 28792527 - 28792743
Alignment:
Q  1 tcattgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catct 99  Q
    |||||||||||||||||| ||||| || |||||||||||||||| ||| || ||||||| | |  | |||||||| |  ||  ||||||||||| ||| |    
T  28792527 tcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtcgatcctactaatgtgcgacatcatacaggtcgttatggtgaagcat-t 28792625  T
Q  100 cactaagcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctac 199  Q
      ||  |||   |||||| || |||||| | ||| | ||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  28792626 ggctgggcatgaaaagaggtttcaaaatgataaggataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctac 28792725  T
Q  200 cattttagtcctgggtac 217  Q
    |||| |||||||||||||    
T  28792726 cattctagtcctgggtac 28792743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 28781267 - 28781483
Alignment:
Q  1 tcattgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catct 99  Q
    |||||||||||||||||| ||||| || |||||||||||||||| ||| |||||||||| | |  | |||||||| |  ||   |||||||||| ||| |    
T  28781267 tcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtggatcctactaatgtgcgacatcatacaggtccttatggtgaagcat-t 28781365  T
Q  100 cactaagcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctac 199  Q
      ||   ||   |||||| || |||||| | ||| | ||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  28781366 ggctggacatgaaaagaggtttcaaaatgataaggataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctac 28781465  T
Q  200 cattttagtcctgggtac 217  Q
    |||| |||||||||||||    
T  28781466 cattctagtcctgggtac 28781483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 28781378 - 28781499
Alignment:
Q  112 aaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcct 211  Q
    |||||| || |||||| | ||| | ||||||||| ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||| |||||||    
T  28781378 aaagaggtttcaaaatgataaggataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccattctagtcct 28781477  T
Q  212 gggtactcctctttacttaatt 233  Q
    ||||||  |  |||||||||||    
T  28781478 gggtacgacaatttacttaatt 28781499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 26623108 - 26623193
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatgg 90  Q
    |||||||| |||||||||||||| |||||||| || ||||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  26623108 tgctacaaaacaaagggtcgtctcgttttgcccgtcttctatggcgtggatcctactcacatacggcatcaaactgggagttatgg 26623193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 26729086 - 26729171
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatgg 90  Q
    |||||||| |||||||||||||| |||||||| || ||||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  26729086 tgctacaaaacaaagggtcgtctcgttttgcccgtcttctatggcgtggatcctactcacatacggcatcaaactgggagttatgg 26729171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 83 - 211
Target Start/End: Original strand, 25481952 - 25482080
Alignment:
Q  83 agttatggtgaacatctcactaagcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctg 182  Q
    |||||||||||| |||| ||||||||   | || | |||||||||||| |||||||||||||||| |||| |||||||||| | ||||| ||| ||||||    
T  25481952 agttatggtgaatatctgactaagcatgaagaggggttccaaaataacgagaaaaacatggagcgattgcgtcaatggaagatggctcttactcaagctg 25482051  T
Q  183 ctaacttgtccggctaccattttagtcct 211  Q
    |||| ||||||||||| |||| |||||||    
T  25482052 ctaatttgtccggctatcattatagtcct 25482080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 381
Target Start/End: Complemental strand, 27604444 - 27604376
Alignment:
Q  313 tttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatgatatat 381  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  27604444 tttttatttacgtttttaaacaagtattagttatttatatgtcaaaatagttagaaatgtataatatat 27604376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 281 - 381
Target Start/End: Complemental strand, 27427385 - 27427284
Alignment:
Q  281 aataccatcttaaagcctaaattggaaacaccttttt-atttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatgatat 379  Q
    ||||||||||||||||||||||  | ||||||||||| |||||  ||||||||||| | ||||||||||||| ||||||||||||| |||||||| ||||    
T  27427385 aataccatcttaaagcctaaatgtgtaacaccttttttatttatgtttttaaacaattgttagttatttatatgtcaaaatagttaaaaatgtataatat 27427286  T
Q  380 at 381  Q
    ||    
T  27427285 at 27427284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 381
Target Start/End: Original strand, 26802850 - 26802955
Alignment:
Q  277 caataataccatcttaaagcctaaattggaaacaccttt-ttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatg 375  Q
    |||||||  ||||||||||  ||||| ||||| |||||| |||| ||| ||||||||||||||||||||||||||| ||  ||||||||||||||||||     
T  26802850 caataatctcatcttaaaggttaaatgggaaatacctttcttatatacgtttttaaacaagtattagttatttatatgttgaaatagttagaaatgtata 26802949  T
Q  376 atatat 381  Q
    ||||||    
T  26802950 atatat 26802955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 211
Target Start/End: Complemental strand, 27718434 - 27718228
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcact 103  Q
    |||||||||||||||||||| || ||||||||||||||||  |||||||| |||| | || | |||||||| |  || |||||||||||| ||| |  ||    
T  27718434 tgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaacgtgcgacatcagaaaggtagttatggtgaagcat-tggct 27718336  T
Q  104 aagcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccatt 203  Q
     ||||   |||||| || |||||| | ||||| ||||||||| ||||||| | ||||||  | |||||||   | ||||||||||||||||||||||||     
T  27718335 gagcatgaaaagaggtttcaaaatgataagaataacatggagaggttgcagcgatggaaagtggctctgagccaggctgctaacttgtccggctaccatg 27718236  T
Q  204 ttagtcct 211  Q
     |||||||    
T  27718235 atagtcct 27718228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 28781516 - 28781606
Alignment:
Q  286 catcttaaagcctaaattggaaacacctttt-tatttacatttttaaacaagtatt-agttatttataagtcaaaatagttagaaatgtat 374  Q
    ||||||||||||||||| |||||||| |||| ||||||| ||||||||||| |||| | |||||| || ||||||||||||||||||||||    
T  28781516 catcttaaagcctaaatgggaaacactttttctatttacgtttttaaacaattatttaattatttttatgtcaaaatagttagaaatgtat 28781606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 28786655 - 28786743
Alignment:
Q  286 catcttaaagcctaaattggaaacacctttt-tatttacatttttaaacaagtatt-agttatttataagtcaaaatagttagaaatgtat 374  Q
    |||||||||||||||   ||||||||||||| ||||||| |||||||||||||||| | |||||| || ||||||||||||||||||||||    
T  28786655 catcttaaagcctaag--ggaaacaccttttctatttacgtttttaaacaagtatttaattatttttatgtcaaaatagttagaaatgtat 28786743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 28792776 - 28792864
Alignment:
Q  286 catcttaaagcctaaattggaaacacctttt-tatttacatttttaaacaagtatt-agttatttataagtcaaaatagttagaaatgtat 374  Q
    |||||||||||||||   ||||||||||||| ||||||| |||||||||||||||| | |||||| || ||||||||||||||||||||||    
T  28792776 catcttaaagcctaag--ggaaacaccttttctatttacgtttttaaacaagtatttaattatttttatgtcaaaatagttagaaatgtat 28792864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 27214669 - 27214758
Alignment:
Q  122 caaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcct 211  Q
    |||||||||||| |||||||||||||||||||  |||||||| ||||||| |   ||||||||||||| || ||||| |||| |||||||    
T  27214669 caaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagctgctaacttatctggctatcattatagtcct 27214758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 27234559 - 27234470
Alignment:
Q  122 caaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcct 211  Q
    |||||||||||| |||||||||||||||||||  |||||||| ||||||| |   ||||||||||||| || ||||| |||| |||||||    
T  27234559 caaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagctgctaacttatctggctatcattatagtcct 27234470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27593079 - 27593022
Alignment:
Q  1 tcattgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcct 58  Q
    |||||||||||||||||||||||| | ||||||||||||||||| ||| |||||||||    
T  27593079 tcattgctacaagacaaagggtcgccctgttttgcctgttttctttggtgtggatcct 27593022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 26048977 - 26049080
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcacta 104  Q
    ||||||||||||||| || |  | || ||||| ||||| ||||  ||||| |||| ||||||||||||||| ||||| ||||||||||| ||||| ||||    
T  26048977 tgctacaagacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacatacgacatcatagtggaagttatggtgagcatcttacta 26049076  T
Q  105 agca 108  Q
    ||||    
T  26049077 agca 26049080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 26070146 - 26070249
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcacta 104  Q
    ||||||||||||||| || |  | || ||||| ||||| ||||  ||||| |||| ||||||||||||||| ||||| ||||||||||| ||||| ||||    
T  26070146 tgctacaagacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacatacgacatcatagtggaagttatggtgagcatcttacta 26070245  T
Q  105 agca 108  Q
    ||||    
T  26070246 agca 26070249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 381
Target Start/End: Original strand, 26646892 - 26646989
Alignment:
Q  286 catcttaaagcctaaattggaaacacct--ttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatgatatat 381  Q
    ||||||||||| ||||| |||||||| |  ||||||| |  ||||||||||||||| | ||||||||| ||||||| |||||||| ||||| ||||||    
T  26646892 catcttaaagcttaaataggaaacacatatttttattaatgtttttaaacaagtataaattatttatatgtcaaaagagttagaactgtataatatat 26646989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 381
Target Start/End: Original strand, 26752860 - 26752957
Alignment:
Q  286 catcttaaagcctaaattggaaacacct--ttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatgatatat 381  Q
    ||||||||||| ||||| |||||||| |  ||||||| |  ||||||||||||||| | ||||||||| ||||||| |||||||| ||||| ||||||    
T  26752860 catcttaaagcttaaataggaaacacatatttttattaatgtttttaaacaagtataaattatttatatgtcaaaagagttagaactgtataatatat 26752957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 217
Target Start/End: Original strand, 26861756 - 26861957
Alignment:
Q  16 aaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcactaagcacagaaa 114  Q
    |||||||||  | ||||||||||||||||||||| ||||||||| | |  | |||||||| || || | |||||||||| ||| |  |||||||   |||    
T  26861756 aaagggtcgcgtcgttttgcctgttttctatggcatggatcctactaatgtgcgacatcatagaggtatttatggtgaagcat-tggctaagcatgaaaa 26861854  T
Q  115 gagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctggg 214  Q
     || || |||||| | | | | ||||||||| |||||||   ||||||  | |||||||   |||||||||||||||| |||||||||||||||||||||    
T  26861855 aaggtttcaaaatgatatggataacatggagaggttgcagagatggaaagttgctctgaaccaagctgctaacttgtcaggctaccattttagtcctggg 26861954  T
Q  215 tac 217  Q
    |||    
T  26861955 tac 26861957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 27724900 - 27724811
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa 94  Q
    |||||||||||||||||||| || ||||||||||||||||  |||||||| |||| | || | |||||||| |  || ||||||||||||    
T  27724900 tgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaacgtgcgacatcagaaaggtagttatggtgaa 27724811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 26617868 - 26617920
Alignment:
Q  119 ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctct 171  Q
    ||||||||||||||| |||||||||||||||||||  |||||||| |||||||    
T  26617868 ttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctct 26617920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 26723796 - 26723848
Alignment:
Q  119 ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctct 171  Q
    ||||||||||||||| |||||||||||||||||||  |||||||| |||||||    
T  26723796 ttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctct 26723848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 374
Target Start/End: Complemental strand, 27592799 - 27592698
Alignment:
Q  277 caataataccatcttaaagcctaaattggaaacaccttttt-atttacatttttaaacaagta---ttagttatttataagtcaaaatagttagaaatgt 372  Q
    |||||||  ||||||||||  ||||  ||||| |||||||| || |||| |||||||||||||   ||||||||||||| ||| ||||||||||||||||    
T  27592799 caataatctcatcttaaaggttaaaagggaaataccttttttatatacagttttaaacaagtactattagttatttatatgtcgaaatagttagaaatgt 27592700  T
Q  373 at 374  Q
    ||    
T  27592699 at 27592698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 374
Target Start/End: Original strand, 27679354 - 27679455
Alignment:
Q  277 caataataccatcttaaagcctaaattggaaacaccttttt-atttacatttttaaacaagta---ttagttatttataagtcaaaatagttagaaatgt 372  Q
    |||||||  ||||||||||  ||||  ||||| |||||||| || |||| |||||||||||||   ||||||||||||| ||| ||||||||||||||||    
T  27679354 caataatctcatcttaaaggttaaaagggaaataccttttttatatacagttttaaacaagtactattagttatttatatgtcgaaatagttagaaatgt 27679453  T
Q  373 at 374  Q
    ||    
T  27679454 at 27679455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 26884473 - 26884523
Alignment:
Q  181 tgctaacttgtccggctaccattttagtcctgggtactcctctttacttaa 231  Q
    ||||||||||||||||||||||||||||| ||||||  || ||||||||||    
T  26884473 tgctaacttgtccggctaccattttagtcttgggtatcccactttacttaa 26884523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 27611057 - 27611003
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatccta 59  Q
    |||||||||||||||||||| || ||||||||||||||||  |||||||| ||||    
T  27611057 tgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaaccta 27611003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 217
Target Start/End: Complemental strand, 28297654 - 28297556
Alignment:
Q  119 ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtac 217  Q
    ||||||||||||||||| ||||||||| |||||||  ||||||||   ||||| ||| || |||||||||| || ||| ||||||| | |||| |||||    
T  28297654 ttccaaaataacaagaataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtac 28297556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 28514419 - 28514517
Alignment:
Q  119 ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtac 217  Q
    ||||||||||||||||| ||||||||| |||||||  ||||||||   ||||| ||| || |||||||||| || ||| ||||||| | |||| |||||    
T  28514419 ttccaaaataacaagaataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtac 28514517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 26811755 - 26811807
Alignment:
Q  119 ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctct 171  Q
    ||||||||||||||| |||||||||| ||||||||  |||||||| |||||||    
T  26811755 ttccaaaataacaaggaaaacatggatcggttgcagaaatggaagatagctct 26811807  T

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Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 28139697 - 28139745
Alignment:
Q  29 gttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaa 77  Q
    |||||||||||||||||||| |||||||||  |||||| ||||||||||    
T  28139697 gttttgcctgttttctatggtgtggatccttctcacattcgacatcaaa 28139745  T

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Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 26937226 - 26937313
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtg 92  Q
    |||| ||||||||| |||| |||  |||||||| |||||||||  |||||||||  |||| | ||||| |||| ||||||||||||||    
T  26937226 tgcttcaagacaaaaggtcatctaattttgcctattttctatgaagtggatccttctcacgttcgacaccaaactgggagttatggtg 26937313  T

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Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 26949902 - 26950005
Alignment:
Q  114 agagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgg 213  Q
    |||| |||||||| | ||| |||||||||||||||||||   |||||||| |||||||||   ||| |||| |||| || ||||||||||| | || |||    
T  26949902 agaggttccaaaagagcaaaaaaaacatggagcggttgctgaaatggaagatagctctgaacaaagttgctgacttatctggctaccatttcaatcttgg 26950001  T
Q  214 gtac 217  Q
    ||||    
T  26950002 gtac 26950005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 371
Target Start/End: Complemental strand, 27706145 - 27706084
Alignment:
Q  313 tttttatttacatttttaaacaagta---ttagttatttataagtcaaaatagttagaaatg 371  Q
    ||||||| |||| |||||||||||||   ||||||||||||| ||| |||||||||||||||    
T  27706145 tttttatatacagttttaaacaagtactattagttatttatatgtcgaaatagttagaaatg 27706084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26802570 - 26802628
Alignment:
Q  1 tcattgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatccta 59  Q
    ||||||||| |||||||||||||| || || |||||| |||||| ||| ||||||||||    
T  26802570 tcattgctataagacaaagggtcgcctcgtcttgcctattttctttggtgtggatccta 26802628  T

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Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 26824240 - 26824294
Alignment:
Q  305 gaaacacctttttatttacatttttaaacaagtattagttatttataagtcaaaa 359  Q
    ||||||| ||||| |||| ||| ||||||||||||||||||||||| ||| ||||    
T  26824240 gaaacacatttttttttatattcttaaacaagtattagttatttattagtaaaaa 26824294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 27531256 - 27531198
Alignment:
Q  1 tcattgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatccta 59  Q
    |||||||||| | ||||||||| |||||||||||||||||||   ||| ||||||||||    
T  27531256 tcattgctacgatacaaagggttgtcttgttttgcctgtttttattggtgtggatccta 27531198  T

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Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 27679078 - 27679132
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatccta 59  Q
    |||||||||||||||||||| || ||| |||||||||||| ||| ||||| ||||    
T  27679078 tgctacaagacaaagggtcgcctcgttctgcctgttttctttggtgtggaaccta 27679132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 29826171 - 29826245
Alignment:
Q  17 aagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggt 91  Q
    ||||||||||| ||||||||| |||||||||  |||||||||  |||  | |||||||| | |||||||||||||    
T  29826171 aagggtcgtctcgttttgcctattttctatgatgtggatccttctcatgtgcgacatcagactgggagttatggt 29826245  T

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Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 192
Target Start/End: Complemental strand, 25506961 - 25506852
Alignment:
Q  83 agttatggtgaacatctcactaagcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctg 182  Q
    |||||||||||| |||| ||||||||   | |||  || |||||||| ||||||||||||||| | | ||||||||||||  ||||||| ||  || |||    
T  25506961 agttatggtgaagatctgactaagcatgaagagaagtttcaaaataataagaaaaacatggagagatcgcatcaatggaaaatagctctaacacaatctg 25506862  T
Q  183 ctaacttgtc 192  Q
    ||||| ||||    
T  25506861 ctaacctgtc 25506852  T

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Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 27604764 - 27604711
Alignment:
Q  1 tcattgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtgga 54  Q
    ||||||||||| ||||||||||||  | |||||||||||||||| ||| |||||    
T  27604764 tcattgctacacgacaaagggtcgcgtcgttttgcctgttttctttggtgtgga 27604711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 374
Target Start/End: Complemental strand, 27677331 - 27677294
Alignment:
Q  337 tattagttatttataagtcaaaatagttagaaatgtat 374  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  27677331 tattagttatttatatgtcgaaatagttagaaatgtat 27677294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Complemental strand, 27698301 - 27698256
Alignment:
Q  336 gtattagttatttataagtcaaaatagttagaaatgtatgatatat 381  Q
    |||||||||||||||| ||| |||||||||||||| ||| ||||||    
T  27698301 gtattagttatttatatgtcgaaatagttagaaatttataatatat 27698256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 28325743 - 28325820
Alignment:
Q  139 catggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggta 216  Q
    ||||||| |||||||  |||||||| | ||||| ||| || |||||||||| || ||| ||||||| |||||||||||    
T  28325743 catggagaggttgcagaaatggaagatggctcttactcaaactgctaacttctcaggccaccatttcagtcctgggta 28325820  T

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Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 381
Target Start/End: Original strand, 25483513 - 25483569
Alignment:
Q  325 tttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatgatatat 381  Q
    |||| |||||||| | ||||||||||| ||||||| |||||||| || |||||||||    
T  25483513 ttttaaaacaagtgtaagttatttatatgtcaaaaaagttagaattgcatgatatat 25483569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 26959415 - 26959519
Alignment:
Q  122 caaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcct 221  Q
    ||||||| |||| ||||||||||||||||||   ||||||||  |||||| |   ||||||||||||| || ||| ||||||| | || ||||||| | |    
T  26959415 caaaatagcaaggaaaacatggagcggttgctgaaatggaagaaagctcttaaccaagctgctaacttatctggccaccatttcaatcttgggtaccctt 26959514  T
Q  222 cttta 226  Q
    |||||    
T  26959515 cttta 26959519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 31284714 - 31284781
Alignment:
Q  313 tttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatgatatat 381  Q
    |||||||||| || ||||||||| ||||||||| || || ||||||| | |||||| ||||||||||||    
T  31284714 tttttatttatatatttaaacaaatattagtta-ttgtatgtcaaaacaattagaattgtatgatatat 31284781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 158; Significance: 5e-84; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 5 - 234
Target Start/End: Complemental strand, 29273825 - 29273596
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcacta 104  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29273825 tgctacaagacaaagggtcgtctcattttgcctgtcttctatggcgtggatcctactcacatacgacatcaaagtgggagttatggtgaacatctcacta 29273726  T
Q  105 agcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattt 204  Q
    || ||  | ||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||  ||||| |||||||||| ||||||||||     
T  29273725 agtacgaagagagtttccaaaatagcaagaaaaacatggatcggttgcatcaatggaagttggctctgacccaagcttctaacttgtctggctaccattc 29273626  T
Q  205 tagtcctgggtactcctctttacttaattc 234  Q
    ||||| |||||||| |||||||||||||||    
T  29273625 tagtcatgggtactgctctttacttaattc 29273596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 82; Significance: 1e-38; HSPs: 4)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 233
Target Start/End: Complemental strand, 4726 - 4498
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcact 103  Q
    |||||||||||||||||||| || ||||||||||||||||  |||||||| |||| | || | |||||||  |  || |||||||||||| ||| |  ||    
T  4726 tgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaacgtgcgacatctgaaaggtagttatggtgaagcat-tggct 4628  T
Q  104 aagcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccatt 203  Q
     ||||   |||||| || |||||| | ||||| ||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  4627 gagcatgaaaagaggtttcaaaatgataagaataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccatt 4528  T
Q  204 ttagtcctgggtactcctctttacttaatt 233  Q
     ||||| ||||||| ||| |||||||||||    
T  4527 ctagtcatgggtacgcctatttacttaatt 4498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 13691 - 13459
Alignment:
Q  1 tcattgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catct 99  Q
    |||||||||||||||||| ||||| || |||||||||||||||| ||| |||||||||| | |  | |||||||| |  ||  ||||||||||| ||| |    
T  13691 tcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtggatcctactaatgtgcgacatcatacaggtcgttatggtgaagcat-t 13593  T
Q  100 cactaagcacagaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctac 199  Q
      ||   ||   |||||| || |||||| | ||||| ||||||||||| ||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  13592 ggctggacatgaaaagaggtttcaaaatgataagaataacatggagcgattgcatcaatggaagttggctctgacccaagctgctaacttgtccggctac 13493  T
Q  200 cattttagtcctgggtactcctctttacttaatt 233  Q
    |||| ||||| |||||||  || |||||||||||    
T  13492 cattctagtcatgggtacgactatttacttaatt 13459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 374
Target Start/End: Complemental strand, 4481 - 4391
Alignment:
Q  286 catcttaaagcctaaattggaaacacctttt-tatttacatttttaaacaagta-ttagttatttataagtcaaaatagttagaaatgtat 374  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||| ||| ||| || || |||| |||||||||||||||||    
T  4481 catcttaaagcctaaatgggaaacaccttttatatttacgtttttaaacaagtatttaattacttttatgtcacaatagttagaaatgtat 4391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 374
Target Start/End: Complemental strand, 13442 - 13352
Alignment:
Q  286 catcttaaagcctaaattggaaacacctttt-tatttacatttttaaacaagta-ttagttatttataagtcaaaatagttagaaatgtat 374  Q
    ||||||||||||||||| |||||||| |||| ||||||| |||||||||||||| ||| ||| || || ||||||||||||||||||||||    
T  13442 catcttaaagcctaaatgggaaacactttttctatttacgtttttaaacaagtatttaattacttttatgtcaaaatagttagaaatgtat 13352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 66; Significance: 4e-29; HSPs: 3)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 7764 - 7885
Alignment:
Q  112 aaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcct 211  Q
    |||||| || |||||| | ||||| ||||||||||| ||||||||||||||||| ||||||||  ||||||||||||||||||||||||||| ||||| |    
T  7764 aaagaggtttcaaaatgataagaataacatggagcgattgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccattctagtcat 7863  T
Q  212 gggtactcctctttacttaatt 233  Q
    ||||||  || |||||||||||    
T  7864 gggtacgactatttacttaatt 7885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 7902 - 7992
Alignment:
Q  286 catcttaaagcctaaattggaaacacctttt-tatttacatttttaaacaagta-ttagttatttataagtcaaaatagttagaaatgtat 374  Q
    ||||||||||||||||| |||||||| |||| ||||||| |||||||||||||| ||| ||| || || ||||||||||||||||||||||    
T  7902 catcttaaagcctaaatgggaaacactttttctatttacgtttttaaacaagtatttaattacttttatgtcaaaatagttagaaatgtat 7992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7653 - 7711
Alignment:
Q  1 tcattgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatccta 59  Q
    |||||||||||||||| | ||||| || |||||||||||||||| ||| ||||||||||    
T  7653 tcattgctacaagacagaaggtcgcctcgttttgcctgttttctttggtgtggatccta 7711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 281 - 381
Target Start/End: Original strand, 59978 - 60079
Alignment:
Q  281 aataccatcttaaagcctaaattggaaacaccttttt-atttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatgatat 379  Q
    ||||||||||||||||||||||  | ||||||||||| |||||  ||||||||||| | ||||||||||||| ||||||||||||| |||||||| ||||    
T  59978 aataccatcttaaagcctaaatgtgtaacaccttttttatttatgtttttaaacaattgttagttatttatatgtcaaaatagttaaaaatgtataatat 60077  T
Q  380 at 381  Q
    ||    
T  60078 at 60079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 14411 - 14322
Alignment:
Q  5 tgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa 94  Q
    |||||||||||||||||||| || ||||||||||||||||  |||||||| |||| | || | |||||||| |  || ||||||||||||    
T  14411 tgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaacgtgcgacatcagaaaggtagttatggtgaa 14322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 3346 - 3269
Alignment:
Q  134 aaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcct 211  Q
    |||||||||||| ||||||| | ||||||  | |||||||   | ||||||||||||||||||||||||  |||||||    
T  3346 aaaaacatggagaggttgcagcgatggaaagtggctctgagccaggctgctaacttgtccggctaccatgatagtcct 3269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 117058 - 117135
Alignment:
Q  139 catggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggta 216  Q
    ||||||| |||||||  |||||||| | ||||| ||| || |||||||||| || ||| ||||||| |||||||||||    
T  117058 catggagaggttgcagaaatggaagatggctcttactcaaactgctaacttctcaggccaccatttcagtcctgggta 117135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 3279967 - 3280047
Alignment:
Q  137 aacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtac 217  Q
    |||||| || |||||||| |||||||| | ||||| |   |||| ||||||||||||||| ||||||||| |||| |||||    
T  3279967 aacatgaagaggttgcataaatggaagatggctcttaaccaagcagctaacttgtccggccaccattttaatcctaggtac 3280047  T

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