View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15932_low_58 (Length: 333)

Name: NF15932_low_58
Description: NF15932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15932_low_58
NF15932_low_58
[»] chr6 (17 HSPs)
chr6 (145-319)||(15576170-15576344)
chr6 (85-235)||(16527772-16527913)
chr6 (85-213)||(1755666-1755794)
chr6 (146-235)||(30355260-30355349)
chr6 (15-62)||(15576375-15576422)
chr6 (85-202)||(12972509-12972626)
chr6 (129-228)||(15574842-15574941)
chr6 (236-318)||(6091920-6092002)
chr6 (144-192)||(12974270-12974318)
chr6 (235-286)||(13194291-13194342)
chr6 (105-150)||(7837121-7837166)
chr6 (262-319)||(15320065-15320121)
chr6 (262-319)||(15387143-15387199)
chr6 (110-150)||(17695705-17695745)
chr6 (236-319)||(17858937-17859020)
chr6 (262-319)||(15370706-15370762)
chr6 (110-150)||(11126599-11126639)
[»] chr1 (30 HSPs)
chr1 (85-235)||(23223284-23223434)
chr1 (85-221)||(21451921-21452057)
chr1 (89-235)||(30675360-30675507)
chr1 (85-184)||(15299012-15299111)
chr1 (236-319)||(50048227-50048310)
chr1 (144-235)||(50047113-50047204)
chr1 (144-221)||(12424020-12424097)
chr1 (85-213)||(31313425-31313553)
chr1 (227-319)||(23224605-23224697)
chr1 (235-319)||(34522101-34522185)
chr1 (156-235)||(26657420-26657499)
chr1 (236-319)||(27682910-27682993)
chr1 (143-228)||(11770093-11770178)
chr1 (144-228)||(25730670-25730754)
chr1 (145-226)||(25777932-25778013)
chr1 (144-235)||(12810256-12810345)
chr1 (160-212)||(34935297-34935349)
chr1 (167-209)||(25266462-25266504)
chr1 (144-228)||(8247756-8247840)
chr1 (105-150)||(22624837-22624882)
chr1 (156-213)||(25965488-25965545)
chr1 (238-319)||(30676649-30676729)
chr1 (235-319)||(9329225-9329309)
chr1 (110-150)||(21914855-21914895)
chr1 (142-202)||(26101987-26102047)
chr1 (245-319)||(11768892-11768965)
chr1 (238-300)||(17836791-17836853)
chr1 (262-319)||(23420501-23420556)
chr1 (110-150)||(21912072-21912112)
chr1 (21-65)||(30675273-30675317)
[»] chr5 (29 HSPs)
chr5 (85-228)||(17027400-17027543)
chr5 (85-213)||(24841626-24841754)
chr5 (110-213)||(11274445-11274547)
chr5 (85-170)||(12029493-12029578)
chr5 (144-228)||(25594791-25594875)
chr5 (152-235)||(17382127-17382210)
chr5 (144-235)||(30072111-30072201)
chr5 (86-222)||(22754829-22754958)
chr5 (235-319)||(17768629-17768713)
chr5 (143-218)||(22967951-22968026)
chr5 (235-319)||(11273683-11273767)
chr5 (168-235)||(24517310-24517377)
chr5 (152-235)||(12340106-12340187)
chr5 (236-319)||(19571029-19571112)
chr5 (144-221)||(22229741-22229818)
chr5 (85-202)||(22643989-22644105)
chr5 (235-319)||(20715816-20715900)
chr5 (110-150)||(20860430-20860470)
chr5 (110-150)||(34133866-34133906)
chr5 (90-137)||(11274548-11274595)
chr5 (236-319)||(18451061-18451144)
chr5 (240-319)||(25682128-25682207)
chr5 (236-286)||(24518964-24519014)
chr5 (143-213)||(24846192-24846262)
chr5 (144-220)||(15205577-15205653)
chr5 (238-319)||(24842934-24843015)
chr5 (262-319)||(29196495-29196552)
chr5 (110-150)||(22938049-22938089)
chr5 (141-213)||(26070404-26070475)
[»] chr2 (23 HSPs)
chr2 (85-228)||(28278522-28278664)
chr2 (143-235)||(21505231-21505323)
chr2 (89-213)||(39730324-39730448)
chr2 (85-210)||(31449830-31449955)
chr2 (88-202)||(32276638-32276752)
chr2 (235-319)||(31000585-31000669)
chr2 (156-213)||(32619586-32619643)
chr2 (144-235)||(35707735-35707826)
chr2 (144-235)||(25473969-25474060)
chr2 (236-319)||(41256208-41256292)
chr2 (144-211)||(18236418-18236485)
chr2 (153-235)||(1733042-1733123)
chr2 (237-319)||(28455128-28455210)
chr2 (133-183)||(29769610-29769660)
chr2 (85-182)||(27918127-27918224)
chr2 (262-319)||(30477725-30477782)
chr2 (85-149)||(22388934-22388997)
chr2 (110-150)||(1504312-1504352)
chr2 (110-150)||(20379377-20379417)
chr2 (110-150)||(25873169-25873209)
chr2 (110-150)||(25886157-25886197)
chr2 (161-213)||(31914047-31914099)
chr2 (110-150)||(45456266-45456306)
[»] chr4 (26 HSPs)
chr4 (85-219)||(1676403-1676537)
chr4 (85-219)||(1682931-1683065)
chr4 (85-221)||(1696675-1696809)
chr4 (146-221)||(15192137-15192212)
chr4 (236-319)||(47023552-47023635)
chr4 (85-172)||(34850752-34850839)
chr4 (160-235)||(34864383-34864458)
chr4 (262-319)||(24579990-24580047)
chr4 (147-211)||(12111446-12111510)
chr4 (142-213)||(18897921-18897992)
chr4 (143-228)||(5906819-5906905)
chr4 (130-196)||(10576371-10576437)
chr4 (262-319)||(12805794-12805851)
chr4 (262-319)||(27303934-27303991)
chr4 (263-319)||(51885864-51885920)
chr4 (235-298)||(20717941-20718004)
chr4 (236-319)||(22219926-22220009)
chr4 (144-206)||(9288142-9288204)
chr4 (235-299)||(12840697-12840761)
chr4 (144-235)||(25315323-25315414)
chr4 (165-228)||(25050164-25050227)
chr4 (246-297)||(30797703-30797754)
chr4 (152-196)||(10320350-10320394)
chr4 (239-319)||(10450301-10450381)
chr4 (145-213)||(17339927-17339995)
chr4 (110-150)||(19826667-19826707)
[»] chr3 (25 HSPs)
chr3 (86-234)||(21017750-21017899)
chr3 (85-210)||(13911138-13911263)
chr3 (144-227)||(25919564-25919647)
chr3 (85-184)||(8402693-8402792)
chr3 (144-235)||(17637035-17637126)
chr3 (85-149)||(5632668-5632732)
chr3 (111-162)||(11521039-11521090)
chr3 (241-319)||(10342986-10343064)
chr3 (175-235)||(33914654-33914714)
chr3 (153-227)||(12573231-12573305)
chr3 (153-227)||(13549695-13549769)
chr3 (148-213)||(16970177-16970241)
chr3 (144-221)||(19219317-19219394)
chr3 (110-150)||(10883984-10884024)
chr3 (144-211)||(18065761-18065828)
chr3 (144-233)||(1475374-1475463)
chr3 (147-213)||(31477705-31477771)
chr3 (239-317)||(33913400-33913478)
chr3 (262-319)||(2728473-2728530)
chr3 (267-316)||(18066882-18066931)
chr3 (262-319)||(25918112-25918168)
chr3 (110-150)||(16223572-16223612)
chr3 (110-150)||(18541774-18541814)
chr3 (110-150)||(31283869-31283909)
chr3 (110-150)||(47053927-47053967)
[»] chr7 (42 HSPs)
chr7 (85-221)||(7494584-7494720)
chr7 (89-235)||(20470902-20471049)
chr7 (89-228)||(21471674-21471813)
chr7 (144-235)||(29544451-29544542)
chr7 (85-196)||(9761537-9761646)
chr7 (89-186)||(3269123-3269220)
chr7 (144-240)||(2632523-2632619)
chr7 (144-213)||(7142030-7142099)
chr7 (235-319)||(21544679-21544763)
chr7 (236-319)||(18494555-18494638)
chr7 (235-319)||(7776350-7776434)
chr7 (236-311)||(7494480-7494555)
chr7 (235-321)||(7143553-7143639)
chr7 (134-196)||(9801996-9802057)
chr7 (262-319)||(7152100-7152157)
chr7 (146-210)||(2353357-2353421)
chr7 (262-318)||(9121052-9121108)
chr7 (144-235)||(20446171-20446262)
chr7 (231-319)||(21473006-21473094)
chr7 (144-236)||(23124833-23124924)
chr7 (236-319)||(14074465-14074547)
chr7 (236-319)||(14384493-14384575)
chr7 (89-212)||(16536689-16536811)
chr7 (85-212)||(16577387-16577513)
chr7 (85-212)||(16588149-16588275)
chr7 (89-212)||(16628851-16628973)
chr7 (85-167)||(1074341-1074422)
chr7 (85-146)||(7956058-7956119)
chr7 (145-202)||(18496498-18496555)
chr7 (144-196)||(21545929-21545984)
chr7 (110-150)||(13287676-13287716)
chr7 (110-150)||(26137034-26137074)
chr7 (241-300)||(9071392-9071451)
chr7 (156-221)||(7815267-7815332)
chr7 (140-186)||(22532784-22532830)
chr7 (110-150)||(2506786-2506826)
chr7 (235-319)||(4091345-4091429)
chr7 (110-150)||(4596918-4596958)
chr7 (110-150)||(15170730-15170770)
chr7 (110-150)||(19154909-19154949)
chr7 (110-150)||(20754308-20754348)
chr7 (110-150)||(39270239-39270279)
[»] chr8 (29 HSPs)
chr8 (88-235)||(24120107-24120254)
chr8 (85-235)||(16052369-16052519)
chr8 (93-213)||(22894648-22894768)
chr8 (137-227)||(28252481-28252571)
chr8 (85-235)||(28901432-28901582)
chr8 (85-235)||(10866861-10867011)
chr8 (127-235)||(13082029-13082137)
chr8 (89-170)||(5570305-5570386)
chr8 (154-235)||(12956431-12956512)
chr8 (154-235)||(14977199-14977280)
chr8 (89-172)||(28973490-28973573)
chr8 (237-319)||(13305639-13305721)
chr8 (152-213)||(11310318-11310379)
chr8 (143-235)||(16054225-16054317)
chr8 (262-319)||(26853589-26853646)
chr8 (111-196)||(29291670-29291755)
chr8 (144-235)||(32239219-32239310)
chr8 (143-241)||(6358629-6358727)
chr8 (235-297)||(12957559-12957621)
chr8 (237-319)||(28900132-28900210)
chr8 (235-300)||(32240446-32240511)
chr8 (144-235)||(29047408-29047499)
chr8 (235-286)||(13803096-13803147)
chr8 (142-196)||(30851230-30851284)
chr8 (105-150)||(26829427-26829472)
chr8 (110-150)||(25180687-25180727)
chr8 (110-150)||(29765357-29765397)
chr8 (160-212)||(30543711-30543763)
chr8 (110-150)||(33878232-33878272)
[»] scaffold0282 (1 HSPs)
scaffold0282 (89-211)||(22661-22783)
[»] scaffold1026 (1 HSPs)
scaffold1026 (87-206)||(1952-2071)
[»] scaffold0171 (3 HSPs)
scaffold0171 (236-319)||(7338-7421)
scaffold0171 (144-221)||(6128-6205)
scaffold0171 (151-213)||(21336-21398)
[»] scaffold0386 (2 HSPs)
scaffold0386 (144-220)||(8816-8892)
scaffold0386 (159-228)||(13170-13239)
[»] scaffold0002 (1 HSPs)
scaffold0002 (144-221)||(446937-447014)
[»] scaffold0103 (1 HSPs)
scaffold0103 (238-319)||(36494-36575)
[»] scaffold0188 (1 HSPs)
scaffold0188 (153-213)||(27068-27128)
[»] scaffold0048 (2 HSPs)
scaffold0048 (110-150)||(24001-24041)
scaffold0048 (110-150)||(28239-28279)
[»] scaffold0210 (1 HSPs)
scaffold0210 (85-147)||(25216-25278)
[»] scaffold0084 (1 HSPs)
scaffold0084 (110-151)||(28544-28585)
[»] scaffold0321 (1 HSPs)
scaffold0321 (110-150)||(3841-3881)
[»] scaffold0270 (1 HSPs)
scaffold0270 (110-150)||(1054-1094)
[»] scaffold0198 (1 HSPs)
scaffold0198 (105-149)||(3979-4023)
[»] scaffold0072 (1 HSPs)
scaffold0072 (110-150)||(38382-38422)


Alignment Details
Target: chr6 (Bit Score: 139; Significance: 1e-72; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 145 - 319
Target Start/End: Complemental strand, 15576344 - 15576170
Alignment:
Q  145 gatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgttgatggacg 244  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15576344 gatgatggagcatcatatgatatttttggctatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagaggagttgttgatggacg 15576245  T
Q  245 aaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||| |||||| ||| |||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||    
T  15576244 aaattggcaagtgcatcaaatcgtaacaagtaataaagtagtcagtttatcgttctccgcagggattgtcgttca 15576170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 16527772 - 16527913
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    |||||||| |||||||||   ||| |||||||||||||| |||||||||||||||||||||||| | ||||||||||| |||||||||| ||||||||||    
T  16527772 attctaacgtcttgctat---gttgcttgaggacaagaaccggtttaagtttggggttgtgatggcagagcatcatataatatttttggctatgttttta 16527868  T
Q  185 gtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    |||||||||||||      |||||||||| ||||||| |||||| ||||||    
T  16527869 gtacttttctttg------aagacaaataagatgagagttagaggagttgt 16527913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 1755794 - 1755666
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    |||||||||||| || ||| |||| || ||||||| | ||  ||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||    
T  1755794 attctaacttctcgcaattttgttgctagaggacaggtaatagtttaagtttggggttgtgatgacggagcatcatatgatatatcaggttatgttttta 1755695  T
Q  185 gtacttttctttgaatttaaagacaaata 213  Q
    ||  |||||||||||||| ||||||||||    
T  1755694 gttattttctttgaatttgaagacaaata 1755666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 235
Target Start/End: Original strand, 30355260 - 30355349
Alignment:
Q  146 atgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  ||| |||| |||  ||||| ||||||| |||||| ||||||    
T  30355260 atgacggagcatcatatgatatttttggctatgtttttagtacttttacttgcatttgaaggtaaataagatgagagttagagaagttgt 30355349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 15576422 - 15576375
Alignment:
Q  15 gtaatatagttacgtctgatggtgggatgagtgacaatctgagcaaaa 62  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15576422 gtaatatagttacgtctgacggtgggatgagtgacaatctgagcaaaa 15576375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 12972626 - 12972509
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    |||||||||| |||||||| || | ||| || | ||| |||  |||||||||||||| |||||||  || |||||| |||||||||||| ||||||||||    
T  12972626 attctaacttgttgctattttggtgctttagaagaagcaacaatttaagtttggggtagtgatgatagaacatcatttgatatttttggctatgttttta 12972527  T
Q  185 gtacttttctttgaattt 202  Q
    ||  ||||||||| ||||    
T  12972526 gttattttctttgcattt 12972509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 228
Target Start/End: Original strand, 15574842 - 15574941
Alignment:
Q  129 ttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattaga 227  Q
    |||||||||||||| ||||||| || |||||||||| | |||||| ||| || ||||||| ||||||||| |||| |||||||||| ||||||| |||||    
T  15574842 ttaagtttggggttatgatgacagaacatcatatgaca-ttttggctatcttgttagtactttttctttgcatttgaagacaaataagatgagatttaga 15574940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 318
Target Start/End: Original strand, 6091920 - 6092002
Alignment:
Q  236 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttc 318  Q
    ||||||||||||||  ||||| ||| ||||||||| || |||||||||||  || |||||||||| |||| ||||||||||||    
T  6091920 tgatggacgaaattgacaagtgcattaaatcgtaaaaaataataaagtagaaagtttatcgttctccacaaggattgtcgttc 6092002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 12974270 - 12974318
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtactttt 192  Q
    |||||||||||||||||||||||||||| | |||| |||||||||||||    
T  12974270 tgatgacggagcatcatatgatattttttgctatggttttagtactttt 12974318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 13194342 - 13194291
Alignment:
Q  235 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagt 286  Q
    ||||||||||||||| |||||| ||  |||||||||||||||||||||||||    
T  13194342 ttgatggacgaaattggcaagtgcaccaaatcgtaacaagtaataaagtagt 13194291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 7837121 - 7837166
Alignment:
Q  105 tgtttcttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||||||    
T  7837121 tgtttcttgaggacaagtaacagtttaagtttgaggttgtgatgac 7837166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 15320121 - 15320065
Alignment:
Q  262 aaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||||||| ||||||||||| || ||||| ||||||||| |||||||||||||    
T  15320121 aaatcgtaacaagcaataaagtagtaagtttatc-ttcttcacaaggattgtcgttca 15320065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 15387199 - 15387143
Alignment:
Q  262 aaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||||||| ||||||||||| || ||||| ||||||||| |||||||||||||    
T  15387199 aaatcgtaacaagcaataaagtagtaagtttatc-ttcttcacaaggattgtcgttca 15387143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 17695705 - 17695745
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  17695705 cttgaggacaaggaatggtttaagtttggggttgtgatgac 17695745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 319
Target Start/End: Original strand, 17858937 - 17859020
Alignment:
Q  236 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||||||||  || || ||| |||| |||||||||||| ||||||| || |||||||| |||| | |||||||| ||||    
T  17858937 tgatggacgaaattgacatgtgcatcaaatagtaacaagtaattaagtagtaagtttatcgtttttcatatggattgtctttca 17859020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 15370762 - 15370706
Alignment:
Q  262 aaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||| ||| ||||||||||| || ||||| ||||||||| |||||||||||||    
T  15370762 aaatcgtaataagcaataaagtagtaagtttatc-ttcttcacaaggattgtcgttca 15370706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 11126639 - 11126599
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    ||||||||| ||||| |||| ||||||||||||||||||||    
T  11126639 cttgaggactagaaatggttcaagtttggggttgtgatgac 11126599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 23223284 - 23223434
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    ||||||||||||| |||||||||| ||| ||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |    
T  23223284 attctaacttctttctattgtgttgcttaaggacaagaaacaatttaagtttggggttgtgatgacggagcatcatatgatgtttttggctatgttttaa 23223383  T
Q  185 gtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    ||||||||||||| ||||  |||||| || |||| || |||||| ||||||    
T  23223384 gtacttttctttgcattttgagacaattaagatgggagttagaggagttgt 23223434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 85 - 221
Target Start/End: Complemental strand, 21452057 - 21451921
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||  |||||||||||| | |||||| ||||||||||    
T  21452057 attctaacttcttgctattgtgtttcttgaggacaagtaatagtttaagtttggggttgtgatgacatagcatcatatgaca-ttttggctatgttttta 21451959  T
Q  185 gtac-ttttctttgaatttaaagacaaataggatgaga 221  Q
    |||| ||||||||| |||| |||||||||| |||||||    
T  21451958 gtacgttttctttgcatttgaagacaaataagatgaga 21451921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 30675360 - 30675507
Alignment:
Q  89 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac 188  Q
    |||||||||||||| || || |||||||||||| ||| ||||||||| || ||||||||||| ||||||||||||| |||||| | ||||||||||| ||    
T  30675360 taacttcttgctatagttttgcttgaggacaagcaactgtttaagttcggtgttgtgatgacagagcatcatatgacattttttgctatgtttttagaac 30675459  T
Q  189 ttttc-tttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    ||||| |||  ||||  ||||||||| ||||| |||||||| ||||||    
T  30675460 ttttctttttcatttgtagacaaataagatgaaaattagaggagttgt 30675507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 15299111 - 15299012
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    ||||||||||||||||||| | || |||||||| ||  |||| ||||| |||| | ||||||||| ||| |||||||||||||||| |||||||||||||    
T  15299111 attctaacttcttgctatttttttgcttgaggagaatcaacgatttaaatttgcgattgtgatgatggaacatcatatgatattttaggttatgttttta 15299012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 50048310 - 50048227
Alignment:
Q  236 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||||||||||||| |||||| ||| ||||  ||||||||||||||||||| || |||||||||| |||||||| |||||||||    
T  50048310 tgatggacgaaattggcaagtgcatcaaattataacaagtaataaagtagtaagtttatcgttctccacagggactgtcgttca 50048227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 50047113 - 50047204
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    ||||||||||  | |||||||||||||||| |||||||||  |||||||||||| |||| |||||||||| ||||| || ||||| ||||||    
T  50047113 tgatgacggaataccatatgatatttttggctatgtttttgatacttttctttgcatttgaagacaaataagatgaaaagtagaggagttgt 50047204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 12424097 - 12424020
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgaga 221  Q
    ||||||| ||||||||||||||| |||||| |||||||||||||| ||||||||| |||| |||||||||| |||||||    
T  12424097 tgatgacagagcatcatatgata-ttttggctatgtttttagtactttttctttgcatttgaagacaaataagatgaga 12424020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 31313425 - 31313553
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttt-tt 183  Q
    ||||||| ||||||||||| |||| | |||||||||| ||| |||||||||||||||||||| || ||  |||||||||||| ||| ||  |||||| ||    
T  31313425 attctaatttcttgctattttgttgcctgaggacaagcaacagtttaagtttggggttgtgacgatgg-tcatcatatgataatttaggccatgtttctt 31313523  T
Q  184 agtacttttctttgaatttaaagacaaata 213  Q
    |||  ||||||||| |||| ||| ||||||    
T  31313524 agttattttctttgcatttgaaggcaaata 31313553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 319
Target Start/End: Complemental strand, 23224697 - 23224605
Alignment:
Q  227 agtagttgttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||| ||| |||||| ||||||| |||||| | | ||||||||||||||||||| ||||| || ||||| |||| |||| |||||||||||||    
T  23224697 agtaattggtgatgggcgaaattggcaagtgcgtcaaatcgtaacaagtaataaggtagtaagtttatcattctccacatggattgtcgttca 23224605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 34522185 - 34522101
Alignment:
Q  235 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||||||| |||||| |||||| ||  |||||||||||||||||||| |||| || |||||||||| |||| ||||||| |||||    
T  34522185 ttgatggaagaaattggcaagtgcaccaaatcgtaacaagtaataaaatagtaagtttatcgttctccacaaggattgttgttca 34522101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 26657420 - 26657499
Alignment:
Q  156 atcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    |||||||||||||||||  |||||||||| |||||||||||| |||| |||||||||| | |||||  ||||| ||||||    
T  26657420 atcatatgatatttttgactatgtttttattacttttctttgcatttgaagacaaatatgttgagagatagaggagttgt 26657499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 27682993 - 27682910
Alignment:
Q  236 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||||||||  ||||| ||  ||| ||||||||||||||||||||| || |||| |||||  |||||||||||||||||    
T  27682993 tgatggacgaaattgacaagtgcaccaaaccgtaacaagtaataaagtagtaagtttattgttctctacagggattgtcgttca 27682910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 11770178 - 11770093
Alignment:
Q  143 gtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagag 228  Q
    |||||||  |||||||| ||||||||||||  |||||||||| |||| ||||||| |||| |||| ||||| ||||||| ||||||    
T  11770178 gtgatgatagagcatcacatgatatttttgtctatgtttttaatactattctttgcatttgaagataaataagatgagagttagag 11770093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 25730754 - 25730670
Alignment:
Q  144 tgatgacggagcatcatatgatatttttg-gttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagag 228  Q
    ||||||| ||||||||||||||||||||  | |||||||| |||||||||||||| |||| || ||||||| ||||||| ||||||    
T  25730754 tgatgacagagcatcatatgatatttttttgctatgtttt-agtacttttctttgcatttgaaaacaaataagatgagagttagag 25730670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 25778013 - 25777932
Alignment:
Q  145 gatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattag 226  Q
    |||||||||| |||||||||||||||| | |||||| ||||| |||||||||| |||| || | ||||| ||||||| ||||    
T  25778013 gatgacggagtatcatatgatattttttgctatgttcttagtgcttttctttgcatttgaaaataaataagatgagagttag 25777932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 12810256 - 12810345
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    |||||||| ||||||||  |||||||||   ||||||||||||||||||||||  ||||||||||||||| | |||||  ||||| ||||||    
T  12810256 tgatgacgaagcatcat--gatattttttactatgtttttagtacttttctttatatttaaagacaaataagttgagagatagaggagttgt 12810345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 34935349 - 34935297
Alignment:
Q  160 tatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaat 212  Q
    ||||||||||| || ||||||||||||  ||||||||||||||||||||||||    
T  34935349 tatgatattttaggctatgtttttagttattttctttgaatttaaagacaaat 34935297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 25266504 - 25266462
Alignment:
Q  167 tttttggttatgtttttagtacttttctttgaatttaaagaca 209  Q
    ||||||||||||||||||||||||||||||| |||| ||||||    
T  25266504 tttttggttatgtttttagtacttttctttgcatttgaagaca 25266462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 8247840 - 8247756
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagta-cttttctttgaatttaaagacaaataggatgagaattagag 228  Q
    ||||||| ||||||||||||| | |||||  |||||||||| || |||||||||| |||| |||||||||| ||||||| ||||||    
T  8247840 tgatgacagagcatcatatgaca-ttttgactatgtttttaataccttttctttgcatttgaagacaaataagatgagagttagag 8247756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 22624837 - 22624882
Alignment:
Q  105 tgtttcttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||    
T  22624837 tgttacttgaggacaagcaaccgtttaagtttggggttgtgatgac 22624882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 25965545 - 25965488
Alignment:
Q  156 atcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 213  Q
    |||||||||| |||| |||||||||||||||  ||||||||| | |||||||||||||    
T  25965545 atcatatgatgttttaggttatgtttttagttattttctttgtacttaaagacaaata 25965488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 319
Target Start/End: Complemental strand, 30676729 - 30676649
Alignment:
Q  238 atggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||| ||  ||||||||  ||||||||||||||||||||||||| |  |||||||||| || | |||||||||||||    
T  30676729 atggacgaacttgacaagttcaccaaatcgtaacaagtaataaagtagtaaatttatcgttctgcata-ggattgtcgttca 30676649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 9329309 - 9329225
Alignment:
Q  235 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||||||||| |  ||| ||  |||| |||||||||| |||||||||  | |||||||||| |||| |||||||||||||    
T  9329309 ttgatggacgaaattggagagtacactaaattgtaacaagtattaaagtagtacgtttatcgttctccacacggattgtcgttca 9329225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 21914895 - 21914855
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  21914895 cttgaggacaagtaacggttcaagtttggggttgtgatgac 21914855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 26101987 - 26102047
Alignment:
Q  142 tgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaattt 202  Q
    |||||||| |||||||||||||||||||| ||  |||||||||||  ||||||||| ||||    
T  26101987 tgtgatgatggagcatcatatgatattttaggcgatgtttttagttattttctttgcattt 26102047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 319
Target Start/End: Original strand, 11768892 - 11768965
Alignment:
Q  245 aaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||| |||||| ||| ||||||||| ||| ||||||||||| || |||||| ||| |||| |||||||||||||    
T  11768892 aaatttgcaagtgcatcaaatcgtaataaggaataaagtagtaagtttatcg-tctccacatggattgtcgttca 11768965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 17836791 - 17836853
Alignment:
Q  238 atggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 300  Q
    |||||||||||| |||||| ||  ||||| |||||||||| |||||||| || ||||||||||    
T  17836791 atggacgaaattggcaagtgcaccaaatcataacaagtaagaaagtagtaagtttatcgttct 17836853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 23420501 - 23420556
Alignment:
Q  262 aaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||||||||||||||||||| || |||||| ||| |||| |||||||||||||    
T  23420501 aaatcgtaacaagtaataaagtagtaag-ttatcg-tctccacaaggattgtcgttca 23420556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 21912112 - 21912072
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||  ||||||| ||||||||||||||||||||    
T  21912112 cttgaggacaaataacggttcaagtttggggttgtgatgac 21912072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 30675273 - 30675317
Alignment:
Q  21 tagttacgtctgatggtgggatgagtgacaatctgagcaaaatct 65  Q
    |||||| || ||||||||||| || ||||||||||||||||||||    
T  30675273 tagttaagtttgatggtgggaagaatgacaatctgagcaaaatct 30675317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 85 - 228
Target Start/End: Original strand, 17027400 - 17027543
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    |||||||||| |||||| |||||| |||||||| ||| || |  |||||||||||||||||| || |||||||||||||| |||||||| ||||||||||    
T  17027400 attctaactttttgctaatgtgttgcttgaggataagcaatgacttaagtttggggttgtgacgagggagcatcatatgacatttttggctatgttttta 17027499  T
Q  185 gtacttttctttgaatttaaagacaaataggatgagaattagag 228  Q
    ||||||||||||| |||||||||||| || ||||||| ||||||    
T  17027500 gtacttttctttgcatttaaagacaattaagatgagagttagag 17027543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 24841626 - 24841754
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    |||||||||||||| |||||||||||||||||||||| ||| || || || ||||||||||||||| ||||||||||||| |||||| | ||||||||||    
T  24841626 attctaacttcttgttattgtgtttcttgaggacaagcaacagtgtacgtatggggttgtgatgacagagcatcatatgacattttttgctatgttttta 24841725  T
Q  185 gtacttttctttgaatttaaagacaaata 213  Q
    ||||| ||||||| |||| ||||||||||    
T  24841726 gtactattctttgcatttgaagacaaata 24841754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 213
Target Start/End: Complemental strand, 11274547 - 11274445
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagaca 209  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||| | ||| ||||||||||||||||||| ||||||||||     
T  11274547 cttgaggacaagcaacggtttaagtttggggttgtgatgaaggagcatcatttgatattttttgctat-tttttagtacttttctttgcatttaaagacc 11274449  T
Q  210 aata 213  Q
    ||||    
T  11274448 aata 11274445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 12029493 - 12029578
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttt 170  Q
    ||||| ||||||| ||||| |||| ||||||||||| |||   ||||||||||||||||||||||| |||||||||||||||||||    
T  12029493 attcttacttctttctattttgttacttgaggacaaaaaatattttaagtttggggttgtgatgaccgagcatcatatgatatttt 12029578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 25594875 - 25594791
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagag 228  Q
    ||||||| |||||||||||  ||||||||| |||||||||||||||||| |||| |||| |||||||||| ||||||| ||||||    
T  25594875 tgatgacagagcatcatatattatttttggctatgtttttagtacttttatttgcatttgaagacaaataagatgagagttagag 25594791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 17382210 - 17382127
Alignment:
Q  152 gagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    |||||||||||||||||||| | ||||| |||||||||||| |||| |||| |||||||||| ||||||| |||||| ||||||    
T  17382210 gagcatcatatgatattttttgctatgtgtttagtacttttttttgcatttgaagacaaataagatgagagttagaggagttgt 17382127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 30072111 - 30072201
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    |||||||||| |||||| || |||||| || |||||||| |||||||||||||| |||| |||||||||| |||||||||||||| ||||||    
T  30072111 tgatgacggaacatcatgtgttatttt-ggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattagaggagttgt 30072201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 222
Target Start/End: Original strand, 22754829 - 22754958
Alignment:
Q  86 ttctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttag 185  Q
    ||||||||| ||||||||||||| |||| |||||||||||  |||||||||||| || | ||||  |||      |||| ||||| || |||||||||||    
T  22754829 ttctaactttttgctattgtgttgcttgtggacaagaaacattttaagtttgggtttcttatgatagag------atgacatttt-ggatatgtttttag 22754921  T
Q  186 tacttttctttgaatttaaagacaaataggatgagaa 222  Q
    ||| |||||||| ||||||||||||||| ||||||||    
T  22754922 tacgtttctttgcatttaaagacaaataagatgagaa 22754958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 17768713 - 17768629
Alignment:
Q  235 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||||||||| ||||||  |  ||||||||| ||||||||||||||| || |||| ||||| ||||||||||||||||||    
T  17768713 ttgatggacgaaattggcaagtaaaccaaatcgtaagaagtaataaagtagtaagtttattgttctccacagggattgtcgttca 17768629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 22968026 - 22967951
Alignment:
Q  143 gtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatg 218  Q
    |||||||||||| ||||||||||||||| || ||||||||||||| ||||||||| || | |||||||||| ||||    
T  22968026 gtgatgacggagtatcatatgatattttaggctatgtttttagtagttttctttgcatgttaagacaaataagatg 22967951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 11273683 - 11273767
Alignment:
Q  235 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||| ||||| |||||| ||| |||| |||||||||||||||||||| || ||||||||||  | | |||||||||||||    
T  11273683 ttgatggacaaaattggcaagtgcatcaaattgtaacaagtaataaagtagtaagtttatcgttctcgatatggattgtcgttca 11273767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 24517310 - 24517377
Alignment:
Q  168 ttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    |||| |||||||||||||| |||| ||||| |||| |||||||||| |||||||||||||| ||||||    
T  24517310 ttttagttatgtttttagttctttgctttgcatttgaagacaaataagatgagaattagaggagttgt 24517377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 12340187 - 12340106
Alignment:
Q  152 gagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    ||||||||||||| ||||| || ||||||||||||| ||||||||| |||| |||||||||| | ||||| |||||| ||||||    
T  12340187 gagcatcatatgacatttt-ggctatgtttttagta-ttttctttgcatttgaagacaaataaggtgagagttagaggagttgt 12340106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 19571112 - 19571029
Alignment:
Q  236 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||||||| ||||| |||||| ||  |||||||||||| |||||||||||| || ||||||||||  ||| |||||||| ||||    
T  19571112 tgatggactaaatttgcaagtgcaccaaatcgtaacaaataataaagtagtaagtttatcgttctctacaaggattgtcattca 19571029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 22229741 - 22229818
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttt-tagtacttttctttgaatttaaagacaaataggatgaga 221  Q
    ||||||| ||||||||||||  ||||| || |||||||| ||||||||||||||| |||| |||||||||| |||||||    
T  22229741 tgatgacagagcatcatatgtcatttt-ggctatgttttttagtacttttctttgcatttgaagacaaataagatgaga 22229818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 22644105 - 22643989
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    |||| |||||||||| ||| |||| |||||||| ||| |||||||||||||| || |||||||||  ||  | ||||| |||||||| | ||| ||||||    
T  22644105 attccaacttcttgccattttgttgcttgaggataagcaacggtttaagttt-ggtttgtgatgattgaataacatataatatttttaggtatattttta 22644007  T
Q  185 gtacttttctttgaattt 202  Q
    ||  ||||||||| ||||    
T  22644006 gttattttctttgtattt 22643989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 20715900 - 20715816
Alignment:
Q  235 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||||||||||||||  ||||| ||  |||| |||| ||||||||| ||||| || |||||||||| | |||||||||| |||||    
T  20715900 ttgatggacgaaattgacaagtgcaccaaattgtaataagtaataaggtagtaagtttatcgttctccgcagggattgttgttca 20715816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 20860470 - 20860430
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| ||| ||||||||||||||||||||||||    
T  20860470 cttgaggacaagcaacagtttaagtttggggttgtgatgac 20860430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 34133906 - 34133866
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  34133906 cttgaggacaaggaacggttcaagtttggggttgtgatgac 34133866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 11274595 - 11274548
Alignment:
Q  90 aacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttg 137  Q
    |||||||||||| |||||| |||||||||||| ||| |||||||||||    
T  11274595 aacttcttgctactgtgttgcttgaggacaagtaacagtttaagtttg 11274548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 319
Target Start/End: Original strand, 18451061 - 18451144
Alignment:
Q  236 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||||||||||||| ||||||  |  | |||||||||||||||||||| || || |||||||||| ||||  |||||| |||||    
T  18451061 tgatggacgaaattggcaagtggaccagatcgtaacaagtaataaagttgtaagtttatcgttctccacaatgattgttgttca 18451144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 319
Target Start/End: Complemental strand, 25682207 - 25682128
Alignment:
Q  240 ggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||||||||| |||||| ||  |||||||||||||||||||| |||| |  |||||||||| |||  ||||||| |||||    
T  25682207 ggacgaaattggcaagtgcactaaatcgtaacaagtaataaaatagtaattttatcgttctccacgtggattgtagttca 25682128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 286
Target Start/End: Complemental strand, 24519014 - 24518964
Alignment:
Q  236 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagt 286  Q
    |||||||||||| | ||||||  || |||||||||||||||||||||||||    
T  24519014 tgatggacgaaactggcaagtgtatcaaatcgtaacaagtaataaagtagt 24518964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 24846192 - 24846262
Alignment:
Q  143 gtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 213  Q
    ||||||||||||||| ||||||| |||| || ||| ||||||||   |||||||| |||| ||||||||||    
T  24846192 gtgatgacggagcatgatatgatgttttaggctatatttttagttactttctttgcatttgaagacaaata 24846262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 15205577 - 15205653
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagta-cttttctttgaatttaaagacaaataggatgag 220  Q
    ||||||| ||||||||||||||| |||||  |||||||||||||  |||| |||| ||||||| ||||||| ||||||    
T  15205577 tgatgacagagcatcatatgata-ttttgactatgtttttagtattttttatttgcatttaaatacaaataagatgag 15205653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 319
Target Start/End: Complemental strand, 24843015 - 24842934
Alignment:
Q  238 atggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||||||||||  ||||||| |  ||||| ||||||||||||||||||| || |||| |||||  ||| ||||||| |||||    
T  24843015 atggacgaaatgggcaagtttactaaatcataacaagtaataaagtagtaagtttatagttctctacaaggattgttgttca 24842934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 29196495 - 29196552
Alignment:
Q  262 aaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||||||||||  |||||||||||| || |||||||||| || ||||||| |||||||    
T  29196495 aaatcgtaacacataataaagtagttagtttatcgttctccatagggattatcgttca 29196552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 22938089 - 22938049
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  22938089 cttgaggacaaggaatggttcaagtttggggttgtgatgac 22938049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 26070404 - 26070475
Alignment:
Q  141 ttgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 213  Q
    |||| |||| ||| ||||||||||| ||||||| ||||||||||||  ||||||||| |||| ||| ||||||    
T  26070404 ttgtaatgatggaacatcatatgat-tttttggctatgtttttagttattttctttgcattttaaggcaaata 26070475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 28278664 - 28278522
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    |||||||||||||||||||||||| |||||||||||| |||  ||||||||| ||||||||||||| |||||||||||||||||||| | |||| |||||    
T  28278664 attctaacttcttgctattgtgttgcttgaggacaagcaacactttaagttttgggttgtgatgacagagcatcatatgatattttttgctatg-tttta 28278566  T
Q  185 gtacttttctttgaatttaaagacaaataggatgagaattagag 228  Q
    ||||||||||||| |||| ||| |||||| || |||| ||||||    
T  28278565 gtacttttctttgcatttgaaggcaaataagaagagagttagag 28278522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 21505323 - 21505231
Alignment:
Q  143 gtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||| |||||||||| ||||||| |||||||||||||    
T  21505323 gtgatgacggagcatcatatgatatttttggctatgtttttagtatttttctttgcatttgaagacaaataagatgagagttagagtagttgt 21505231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 89 - 213
Target Start/End: Original strand, 39730324 - 39730448
Alignment:
Q  89 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac 188  Q
    ||||||||||||||| |||| |||||||||||  |||  ||||||||||||||||||||| ||||||||||||| ||||||| || ||||||||||||      
T  39730324 taacttcttgctattttgttgcttgaggacaaataacattttaagtttggggttgtgatggcggagcatcatataatattttaggctatgtttttagtta 39730423  T
Q  189 ttttctttgaatttaaagacaaata 213  Q
    ||||||||  | || ||||||||||    
T  39730424 ttttctttataattgaagacaaata 39730448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 85 - 210
Target Start/End: Original strand, 31449830 - 31449955
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    ||||| ||||||||||| | |||| |||||||||||| ||| ||||||||||||||||||||||| |||| ||| |||||||||||  | ||||||||||    
T  31449830 attctgacttcttgctaatttgttacttgaggacaagcaacagtttaagtttggggttgtgatgatggagtatcttatgatattttaagctatgttttta 31449929  T
Q  185 gtacttttctttgaatttaaagacaa 210  Q
    ||  |||| |||| |||| |||||||    
T  31449930 gttattttatttgcatttgaagacaa 31449955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 32276752 - 32276638
Alignment:
Q  88 ctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagta 187  Q
    |||| |||||| |||| |||| | | |||||||||||| ||||||||||||||||||||||| ||| ||||||||| || |||||| ||||||||||||     
T  32276752 ctaagttcttgttattttgttgcgtaaggacaagaaaccgtttaagtttggggttgtgatgaaggaacatcatatggtacttttggatatgtttttagtt 32276653  T
Q  188 cttttctttgaattt 202  Q
     ||||||||| ||||    
T  32276652 attttctttgcattt 32276638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 31000669 - 31000585
Alignment:
Q  235 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||||||||| |||||| ||| |||| |||||||||||||||||||| || ||||| |||| ||||||||||||||||||    
T  31000669 ttgatggacgaaatttgcaagtgcatcaaattgtaacaagtaataaagtagtaagtttatcattctccacagggattgtcgttca 31000585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 32619586 - 32619643
Alignment:
Q  156 atcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 213  Q
    |||||||||||||||||| ||| ||||||||||||||||||| |||| ||||||||||    
T  32619586 atcatatgatatttttggctatatttttagtacttttctttgcatttgaagacaaata 32619643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 35707735 - 35707826
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    ||||||| ||||||||||||| | |||||  |||||||||||||| ||||||||| |||| |||||||||| ||||||| |||||| ||||||    
T  35707735 tgatgacagagcatcatatgaca-ttttgactatgtttttagtactttttctttgtatttgaagacaaataagatgagagttagagaagttgt 35707826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 25473969 - 25474060
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    ||||||| ||||||||||||| | |||||| |||||||||||||| |||| |||  |||| |||||||||| ||||||| |||||| ||||||    
T  25473969 tgatgacagagcatcatatgaca-ttttggctatgtttttagtacattttattttcatttgaagacaaataagatgagagttagaggagttgt 25474060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 236 - 319
Target Start/End: Original strand, 41256208 - 41256292
Alignment:
Q  236 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagt-agtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||||||||  ||||| ||  |||||||||||| ||||||||| ||| || |||||||||| |||| |||||||||||||    
T  41256208 tgatggacgaaattgacaagtgcaccaaatcgtaacaaataataaagtaagtaagtttatcgttctccacatggattgtcgttca 41256292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 18236485 - 18236418
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaa 211  Q
    |||||||||||||||||||||||||||  | ||||||||||||  ||||||||| |||| ||| ||||    
T  18236485 tgatgacggagcatcatatgatattttatgctatgtttttagttattttctttgcatttgaaggcaaa 18236418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 1733042 - 1733123
Alignment:
Q  153 agcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    |||||||||||| ||||| | ||||||||||||||||||| |||  |||| |||||||||  ||||||| |||||| ||||||    
T  1733042 agcatcatatgacattttag-ttatgtttttagtactttttttttcatttgaagacaaatgagatgagagttagaggagttgt 1733123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 28455128 - 28455210
Alignment:
Q  237 gatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||||||| |||||| ||  ||||| ||||||||| ||||||||| || |||| ||||| |||| ||||||| |||||    
T  28455128 gatggacgaaattggcaagtacaccaaatcataacaagtattaaagtagtaagtttatggttctccacatggattgttgttca 28455210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 29769610 - 29769660
Alignment:
Q  133 gtttggggttgtgatgacggagcatcatatgatatttttggttatgttttt 183  Q
    |||||||||| ||||||||||||||||||| ||||||| || |||||||||    
T  29769610 gtttggggttatgatgacggagcatcatataatattttaggctatgttttt 29769660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 182
Target Start/End: Complemental strand, 27918224 - 27918127
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttt 182  Q
    ||||||||||||| ||| ||| ||  |||| |||||| |||  ||||||||||||| |||||||| |||  | |||||||||||||| | ||||||||    
T  27918224 attctaacttcttactaatgttttgtttgatgacaagcaacaatttaagtttggggatgtgatgatggaataacatatgatatttttagctatgtttt 27918127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 30477725 - 30477782
Alignment:
Q  262 aaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||| || |||||||||||| || ||||||||||||| | |||||||||||||    
T  30477725 aaatcgtaataaataataaagtagtaagtttatcgttcttcataaggattgtcgttca 30477782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 22388997 - 22388934
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatga 149  Q
    ||||||||||||||||||| | |||||||| |||||| |||| | ||||||||||||||| ||||    
T  22388997 attctaacttcttgctatttt-tttcttgatgacaagcaacgatataagtttggggttgtaatga 22388934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 1504352 - 1504312
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  1504352 cttgaggacaaggaatggttcaagtttggggttgtgatgac 1504312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 20379417 - 20379377
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| ||| || |||||||||||||||||||||    
T  20379417 cttgaggacaagcaacagtctaagtttggggttgtgatgac 20379377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 25873169 - 25873209
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  25873169 cttgaggacaaggaatggttcaagtttggggttgtgatgac 25873209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 25886157 - 25886197
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  25886157 cttgaggacaagcaacaatttaagtttggggttgtgatgac 25886197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 31914099 - 31914047
Alignment:
Q  161 atgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 213  Q
    |||| |||||| | ||||||||||||| ||||||||| |||| ||||||||||    
T  31914099 atgacattttttgctatgtttttagtatttttctttgcatttgaagacaaata 31914047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 45456266 - 45456306
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  45456266 cttgaggacaaggaatggttcaagtttggggttgtgatgac 45456306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 7e-37; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 85 - 219
Target Start/End: Complemental strand, 1676537 - 1676403
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    ||||||||||||||||| |||||| ||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||     
T  1676537 attctaacttcttgctactgtgttgcttgaagacatgcaacagtttaagtttggggttgtgatgacgaagcatcatatgacatttttggttatatttttt 1676438  T
Q  185 gtacttttctttgaatttaaagacaaataggatga 219  Q
    ||||||||||||  |||| |||||||||| |||||    
T  1676437 gtacttttctttacatttgaagacaaataagatga 1676403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 85 - 219
Target Start/End: Complemental strand, 1683065 - 1682931
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    ||||||||||||||||| |||||| ||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||     
T  1683065 attctaacttcttgctactgtgttgcttgaagacatgcaacagtttaagtttggggttgtgatgacgaagcatcatatgacatttttggttatatttttt 1682966  T
Q  185 gtacttttctttgaatttaaagacaaataggatga 219  Q
    ||||||||||||  |||| |||||||||| |||||    
T  1682965 gtacttttctttacatttgaagacaaataagatga 1682931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 85 - 221
Target Start/End: Complemental strand, 1696809 - 1696675
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    ||||||||||||||||| |||||| ||||| || ||| ||| ||||||||||| |||||||||||   |||||||||||| |||||||| ||  | ||||    
T  1696809 attctaacttcttgctactgtgttgcttgaagataagcaacagtttaagtttgaggttgtgatgataaagcatcatatgacatttttggcta--tattta 1696712  T
Q  185 gtacttttctttgaatttaaagacaaataggatgaga 221  Q
    |||||||| |||  |||| |||||||||| |||||||    
T  1696711 gtacttttatttacatttgaagacaaataagatgaga 1696675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 221
Target Start/End: Original strand, 15192137 - 15192212
Alignment:
Q  146 atgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgaga 221  Q
    ||||| ||||||||||||| |||||| ||||||||||| ||||||||||||| |||| |||||||||| |||||||    
T  15192137 atgacagagcatcatatgacattttttgttatgtttttcgtacttttctttgcatttgaagacaaataagatgaga 15192212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 319
Target Start/End: Original strand, 47023552 - 47023635
Alignment:
Q  236 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||| |||||||| |||||| ||| ||||||||||||||||||| ||||| || ||||| |||||||||| ||||||||||||    
T  47023552 tgatgaacgaaattggcaagtacatcaaatcgtaacaagtaataaggtagtaagtttatctttcttcacagagattgtcgttca 47023635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 34850752 - 34850839
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttg 172  Q
    |||||||||||||| |||||||||||||| | ||||| ||| |||||| ||||| |||| |||||| || |||||||| |||||||||    
T  34850752 attctaacttcttgttattgtgtttcttgcgaacaagcaacagtttaaatttggagttgcgatgacagaacatcatataatatttttg 34850839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 34864458 - 34864383
Alignment:
Q  160 tatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    |||||||||||| ||||||||||||||||||||||||| |||| |||||||||| ||| | | |||||| ||||||    
T  34864458 tatgatattttttgttatgtttttagtacttttctttgtatttgaagacaaataagataaaagttagaggagttgt 34864383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 24580047 - 24579990
Alignment:
Q  262 aaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||||||||||||||||||| || |||||||||| |||| |||||||||||||    
T  24580047 aaatcgtaacaagtaataaagtagttagtttatcgttctccacaaggattgtcgttca 24579990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 12111510 - 12111446
Alignment:
Q  147 tgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaa 211  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||| |||| |||| ||||||||    
T  12111510 tgacagagcatcatatgacattttttgttatgtttttagtacttttatttgcatttgaagacaaa 12111446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 18897921 - 18897992
Alignment:
Q  142 tgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 213  Q
    ||||||| |||| |||||||||| |||||||| | |||||||| |||||||||||| |||| ||||||||||    
T  18897921 tgtgatggcggatcatcatatgacatttttggctgtgtttttactacttttctttgcatttgaagacaaata 18897992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 5906905 - 5906819
Alignment:
Q  143 gtgatgacggagcatcatatgatat-ttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagag 228  Q
    ||||||||| | ||||||||||||| |||| | |||||||||||||||||| |||| |||| |||||||| | ||||||| ||||||    
T  5906905 gtgatgacgaaacatcatatgatatatttttgctatgtttttagtacttttatttgcatttgaagacaaacaagatgagagttagag 5906819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 10576371 - 10576437
Alignment:
Q  130 taagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttcttt 196  Q
    |||||||||||||||||||| |||| ||||||||||||||| |  ||||||||||||  ||||||||    
T  10576371 taagtttggggttgtgatgatggagtatcatatgatattttagactatgtttttagttattttcttt 10576437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 12805794 - 12805851
Alignment:
Q  262 aaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||||||||||||||||||| || ||||| |||| |||| |||||||||||||    
T  12805794 aaatcgtaacaagtaataaagtagtaagtttatcattctccacaaggattgtcgttca 12805851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 27303991 - 27303934
Alignment:
Q  262 aaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||| ||||||||||||||| || |||||||| |||||| |||||||||||||    
T  27303991 aaatcgtaataagtaataaagtagtaagtttatcgtttttcacaaggattgtcgttca 27303934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 319
Target Start/End: Complemental strand, 51885920 - 51885864
Alignment:
Q  263 aatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||| |||||||||||||||| || |||| ||||| ||||||||||||||||||    
T  51885920 aatcgtatcaagtaataaagtagtaagtttattgttctccacagggattgtcgttca 51885864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 298
Target Start/End: Complemental strand, 20718004 - 20717941
Alignment:
Q  235 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgtt 298  Q
    ||||| ||||||||| |||||| ||  ||||||||||||||||||||||||| || ||||||||    
T  20718004 ttgatagacgaaattggcaagtgcaccaaatcgtaacaagtaataaagtagtaagtttatcgtt 20717941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 22220009 - 22219926
Alignment:
Q  236 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||||||||  ||||| ||  ||||| ||||||||||||||||||| || |||||||||| | ||  ||||||||||||    
T  22220009 tgatggacgaaattgacaagtgcactaaatcataacaagtaataaagtagtaagtttatcgttctccgcaaagattgtcgttca 22219926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 9288142 - 9288204
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaag 206  Q
    |||||| |||||| ||||||||||||| || ||||||||||||| ||||||||| || |||||    
T  9288142 tgatgaaggagcaccatatgatattttaggatatgtttttagtagttttctttgcatataaag 9288204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 12840697 - 12840761
Alignment:
Q  235 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttc 299  Q
    ||||||||||||||| |||||| ||   |||||||||||||| ||||||||| || |||||||||    
T  12840697 ttgatggacgaaattggcaagtgcactgaatcgtaacaagtattaaagtagtaagtttatcgttc 12840761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 25315414 - 25315323
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgttttt-agtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    ||||||| ||||||||||||| ||||| | |||||||||| |||||||||||||  |||| |||| ||||| |||||||  ||||| ||||||    
T  25315414 tgatgaccgagcatcatatgacattttag-ttatgttttttagtacttttctttacatttgaagataaataagatgagagatagaggagttgt 25315323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 25050227 - 25050164
Alignment:
Q  165 tatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagag 228  Q
    ||||||||| ||||||||||||| |||| |||| |||| |||||||||| ||||| | ||||||    
T  25050227 tatttttggctatgtttttagtatttttatttgtatttgaagacaaataagatgaaagttagag 25050164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 30797754 - 30797703
Alignment:
Q  246 aattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgt 297  Q
    |||| |||||| ||| ||||||||||||||||||||||||| || |||||||    
T  30797754 aattggcaagtgcatcaaatcgtaacaagtaataaagtagtaagtttatcgt 30797703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 10320394 - 10320350
Alignment:
Q  152 gagcatcatatgatatttttggttatgtttttagtacttttcttt 196  Q
    ||||||||||||| |||||| | ||||||||||||| ||||||||    
T  10320394 gagcatcatatgacatttttcgctatgtttttagtaattttcttt 10320350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 319
Target Start/End: Original strand, 10450301 - 10450381
Alignment:
Q  239 tggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||| |||||| |||||| ||  |||||||||||| |||||||||||| || ||| ||||||  ||||| | |||||||||    
T  10450301 tggatgaaattggcaagtgcaccaaatcgtaacaaataataaagtagtaagtttagcgttctctacaggaaatgtcgttca 10450381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 213
Target Start/End: Complemental strand, 17339995 - 17339927
Alignment:
Q  145 gatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 213  Q
    ||||| |||||||||||||||||||| || |||||||||| |  |||| |||  |||||||| ||||||    
T  17339995 gatgatggagcatcatatgatattttaggctatgtttttaattattttatttacatttaaaggcaaata 17339927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 19826667 - 19826707
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  19826667 cttgaggacaaggaatggttcaagtttggggttgtgatgac 19826707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 3e-36; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 21017750 - 21017899
Alignment:
Q  86 ttctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgata-tttttggttatgttttta 184  Q
    ||||||||||||| ||||||||| ||| |||||||| |||| |||||||||| ||||||||| || ||||||||||||||| ||||| ||||||||||||    
T  21017750 ttctaacttcttgttattgtgttgcttaaggacaagcaacgatttaagtttgaggttgtgataacagagcatcatatgatatttttttgttatgttttta 21017849  T
Q  185 gtacttttctttgaatttaaagacaaataggatgagaattagagtagttg 234  Q
    ||| ||||||||| |||| |||| ||||| ||||||| |||||| |||||    
T  21017850 gtatttttctttgcatttgaagaaaaataagatgagagttagaggagttg 21017899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 85 - 210
Target Start/End: Original strand, 13911138 - 13911263
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    |||||||||| ||||||||||||| ||| |||||||| |||||||||||||| ||||||||||||||||| |||| |||||||||||   ||||||||||    
T  13911138 attctaacttattgctattgtgttactttaggacaagcaacggtttaagtttagggttgtgatgacggagaatcaaatgatatttttttctatgttttta 13911237  T
Q  185 gtacttttctttgaatttaaagacaa 210  Q
    ||| ||||||||| |||| |||||||    
T  13911238 gtaattttctttgtatttgaagacaa 13911263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 227
Target Start/End: Complemental strand, 25919647 - 25919564
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattaga 227  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||| ||||||| |||||    
T  25919647 tgatgatggagcatcatatgatatttctggttatgtttttagtacatttctttgaatttgaagacaaataagatgagagttaga 25919564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 8402792 - 8402693
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    |||||| |||| ||| ||| |||| |||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||| |  ||||||||||    
T  8402792 attctatcttcctgcaattttgttgcttgaggaaaagcaacgatttaagtttggggttgtgatgacagagcatcatatgatattttagactatgttttta 8402693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 17637035 - 17637126
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    ||||||||||||||||||||| |||||||| ||||||| || |||||||||||| | ||||||||||||| ||| ||||| |||| ||||||    
T  17637035 tgatgacggagcatcatatgacatttttggctatgtttatattacttttctttgtaattaaagacaaataagataagaataagaggagttgt 17637126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 5632732 - 5632668
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatga 149  Q
    ||||||||||||||| ||| |||| |||| ||||||| |||||||||||||||||||||||||||    
T  5632732 attctaacttcttgccattttgttgcttggggacaagcaacggtttaagtttggggttgtgatga 5632668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 11521039 - 11521090
Alignment:
Q  111 ttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatat 162  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  11521039 ttgaggacaagcaacggtttaagtttggcgttgtgatgacagagcatcatat 11521090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 319
Target Start/End: Complemental strand, 10343064 - 10342986
Alignment:
Q  241 gacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||||||||||||||| ||  |||||||||| ||||||||| |||| || |||||||||| |||| |||||| ||||||    
T  10343064 gacgaaattagcaagtgcacaaaatcgtaacgagtaataaaatagtaagtttatcgttctccacaaggattgccgttca 10342986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 33914714 - 33914654
Alignment:
Q  175 tatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||||| ||| || ||||||    
T  33914714 tatgtttttagtacttttctttgcatttcaagacaaataagatgagagttataggagttgt 33914654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 12573231 - 12573305
Alignment:
Q  153 agcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattaga 227  Q
    |||||||||||| ||||| ||||||||||||||||| ||||||||| |||  |||||||||| ||||||| |||||    
T  12573231 agcatcatatgacatttt-ggttatgtttttagtactttttctttgcattagaagacaaataagatgagagttaga 12573305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 13549695 - 13549769
Alignment:
Q  153 agcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattaga 227  Q
    |||||||||||| ||||| ||||||||||||||||| ||||||||| |||  |||||||||| ||||||| |||||    
T  13549695 agcatcatatgacatttt-ggttatgtttttagtactttttctttgcattagaagacaaataagatgagagttaga 13549769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 16970177 - 16970241
Alignment:
Q  148 gacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 213  Q
    ||||||||| |||||||||||||||  |||||||||||| |||||||||| |||| || |||||||    
T  16970177 gacggagca-catatgatatttttgactatgtttttagtgcttttctttgtatttgaacacaaata 16970241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 19219394 - 19219317
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgaga 221  Q
    |||||||| |||||||||||||| |||| | | ||||||||||| |||||||||  ||| |||| ||||| |||||||    
T  19219394 tgatgacgaagcatcatatgatacttttagctgtgtttttagtatttttctttgcttttgaagataaataagatgaga 19219317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 10883984 - 10884024
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  10883984 cttgaggacaaggaacggttcaagtttggggttgtgatgac 10884024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 18065761 - 18065828
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaa 211  Q
    ||||||||| |||| || ||| |||||||| ||||||||| ||| | ||||||| |||||||||||||    
T  18065761 tgatgacggggcattatgtgacatttttggctatgtttttggtaatattctttgcatttaaagacaaa 18065828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 1475463 - 1475374
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattagagtagtt 233  Q
    |||||||  |||||||||||| ||||| || |||||||||||||| ||||||||| |||| ||| | |||| ||||||| |||||| ||||    
T  1475463 tgatgacatagcatcatatgacatttt-ggctatgtttttagtactttttctttgcatttgaagtctaataagatgagagttagaggagtt 1475374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 31477771 - 31477705
Alignment:
Q  147 tgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 213  Q
    ||||| |||||||  |||||| || || ||||||||||||  ||||||||| |||||||||||||||    
T  31477771 tgacgaagcatcacttgatatattaggatatgtttttagttattttctttgtatttaaagacaaata 31477705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 317
Target Start/End: Original strand, 33913400 - 33913478
Alignment:
Q  239 tggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgtt 317  Q
    ||||||||||| |||||| ||  |||| |||||||||||||||||||| |  ||||||||||  | | |||||||||||    
T  33913400 tggacgaaattggcaagtgcaccaaattgtaacaagtaataaagtagtaaatttatcgttctctatatggattgtcgtt 33913478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 2728473 - 2728530
Alignment:
Q  262 aaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||||||  || |||||||| || |||||||||| |||| |||||||||||||    
T  2728473 aaatcgtaacaataaacaaagtagtaagtttatcgttctccacaaggattgtcgttca 2728530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 316
Target Start/End: Complemental strand, 18066931 - 18066882
Alignment:
Q  267 gtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgt 316  Q
    |||||||||||||||||||| |  |||||||||| || ||||||||||||    
T  18066931 gtaacaagtaataaagtagtaaatttatcgttctccatagggattgtcgt 18066882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 25918112 - 25918168
Alignment:
Q  262 aaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||| |||||||||||||| ||||| || |||||| |||||| |||||||||||||||    
T  25918112 aaattgtaacaagtaataacgtagtaagtttatcg-tcttcatagggattgtcgttca 25918168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 16223612 - 16223572
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  16223612 cttgaggacaagcaacaatttaagtttggggttgtgatgac 16223572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 18541774 - 18541814
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  18541774 cttgaggacaaggaatggttcaagtttggggttgtgatgac 18541814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 31283869 - 31283909
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| ||  ||||||||||||||||||||||||    
T  31283869 cttgaggacaagcaatagtttaagtttggggttgtgatgac 31283909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 47053927 - 47053967
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  47053927 cttgaggacaaggaatggttcaagtttggggttgtgatgac 47053967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 85 - 221
Target Start/End: Original strand, 7494584 - 7494720
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    ||||| |||||||||||||||||| |||||||||||| ||| ||||||||||| |||||||||||  |||||||| ||||||||||||| |||  |||||    
T  7494584 attctgacttcttgctattgtgttgcttgaggacaagcaacagtttaagtttgtggttgtgatgaatgagcatcacatgatatttttggctattctttta 7494683  T
Q  185 gtacttttctttgaatttaaagacaaataggatgaga 221  Q
    ||||||||||||| | || |||||||| ||| |||||    
T  7494684 gtacttttctttgcacttgaagacaaacaggttgaga 7494720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 20471049 - 20470902
Alignment:
Q  89 taacttcttgctattgtgtttcttgaggacaag-aaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagta 187  Q
    |||||||||||||| ||||| |||||||||||  ||||  |||||||||||||||||||||||| ||||||||||||  ||||||| | |||||||||||    
T  20471049 taacttcttgctatcgtgttgcttgaggacaaacaaacaatttaagtttggggttgtgatgacgaagcatcatatgaattttttggctttgtttttagta 20470950  T
Q  188 cttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    ||||| |||  || | |||||||||| ||||| |||||||| ||||||    
T  20470949 cttttatttatatgtgaagacaaataagatgataattagaggagttgt 20470902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 228
Target Start/End: Original strand, 21471674 - 21471813
Alignment:
Q  89 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac 188  Q
    |||||||| |||||||| || |||||||||||  ||| |||||||||||||||||||||||| ||||||||||||  | |||||||||||||||||||||    
T  21471674 taacttctagctattgtattgcttgaggacaatcaacagtttaagtttggggttgtgatgacagagcatcatatgcca-ttttggttatgtttttagtac 21471772  T
Q  189 -ttttctttgaatttaaagacaaataggatgagaattagag 228  Q
     ||||| ||| |||| |||||||||| ||||| | ||||||    
T  21471773 tttttccttgcatttgaagacaaataagatgatatttagag 21471813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 29544451 - 29544542
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    |||||| ||||||||||||||||||||||| |||||||||| || ||||||||| |||| |||||||||| ||||||| |||||| ||||||    
T  29544451 tgatgaaggagcatcatatgatatttttggctatgtttttattaattttctttgcatttgaagacaaataagatgagagttagaggagttgt 29544542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 9761646 - 9761537
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    ||||||||||| ||||||||| |  |||||||||||| |||  ||||| ||||||||||||||||| ||||||||||||| | |||||| || |||||||    
T  9761646 attctaacttcatgctattgtctagcttgaggacaagcaacaatttaa-tttggggttgtgatgacagagcatcatatgaca-ttttggctacgttttta 9761549  T
Q  185 gtacttttcttt 196  Q
    ||||||||||||    
T  9761548 gtacttttcttt 9761537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 3269220 - 3269123
Alignment:
Q  89 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagt 186  Q
    |||||||||| |||| |||| |  |||||||| |||||||||||||||| |||||||||||| |||| |||||||||| ||| || ||||||||||||    
T  3269220 taacttcttgttattttgttgcgagaggacaataaacggtttaagtttgaggttgtgatgaccgagcttcatatgatactttaggctatgtttttagt 3269123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 240
Target Start/End: Complemental strand, 2632619 - 2632523
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtactttt-ctttgaatttaaagacaaataggatgagaattagagtagttgttgatg 240  Q
    ||||||| ||| ||| ||||||||||||| |||||||| |||||||||| ||||| |||||||||| ||||| |||||| |||||| |||||||||||    
T  2632619 tgatgacagagtatcgtatgatatttttg-ttatgtttatagtactttttctttgcatttaaagactaatagtatgagagttagaggagttgttgatg 2632523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 7142030 - 7142099
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 213  Q
    ||||||| ||||||||||||| |||||||| |||||||||| || ||||||||| |||||||||||||||    
T  7142030 tgatgacagagcatcatatgacatttttggctatgtttttaatagttttctttgcatttaaagacaaata 7142099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 21544679 - 21544763
Alignment:
Q  235 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||||||||| |||||| ||  ||||||||||||||||||||||||| || ||| |||||| |||| |||||||| ||||    
T  21544679 ttgatggacgaaattggcaagtgcaccaaatcgtaacaagtaataaagtagtaagtttaccgttctccacatggattgtcattca 21544763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 236 - 319
Target Start/End: Original strand, 18494555 - 18494638
Alignment:
Q  236 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||| ||||||||| |||||| ||  ||||||||||||||||||| ||||| || |||| ||||| ||||||||||||||||||    
T  18494555 tgatagacgaaattggcaagtgcaccaaatcgtaacaagtaataaggtagtaagtttattgttctccacagggattgtcgttca 18494638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 7776350 - 7776434
Alignment:
Q  235 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||||| || |||||||||||| ||  ||||| |||||||||| |||||||| || |||||||||| |||||||| |||||||||    
T  7776350 ttgatgaacaaaattagcaagtgcaccaaatcttaacaagtaacaaagtagtaagtttatcgttctccacagggactgtcgttca 7776434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 311
Target Start/End: Complemental strand, 7494555 - 7494480
Alignment:
Q  236 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggatt 311  Q
    |||||||||||||| |||||| ||  |||||||||||||||||||| |||| || ||||| |||| ||||||||||    
T  7494555 tgatggacgaaattggcaagtgcaccaaatcgtaacaagtaataaattagtaagtttatcattctccacagggatt 7494480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 321
Target Start/End: Complemental strand, 7143639 - 7143553
Alignment:
Q  235 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttcact 321  Q
    |||||||| ||||||  ||||| ||  ||||||||||||||||||||||||  || ||||||||||||| ||| |||||| ||||||    
T  7143639 ttgatggatgaaattgacaagtgcaccaaatcgtaacaagtaataaagtagcaagtttatcgttcttcagaggaattgtcattcact 7143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 196
Target Start/End: Complemental strand, 9802057 - 9801996
Alignment:
Q  134 tttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttcttt 196  Q
    ||||||||||||||||| ||||||||||||| | |||||| || |||||||||||||||||||    
T  9802057 tttggggttgtgatgacagagcatcatatgaca-ttttggctacgtttttagtacttttcttt 9801996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 7152157 - 7152100
Alignment:
Q  262 aaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||||||||||||||||||| || |||||||| |||| |||||||||| ||||    
T  7152157 aaatcgtaacaagtaataaagtagtaagtttatcgtttttcagagggattgtcattca 7152100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 2353421 - 2353357
Alignment:
Q  146 atgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaa 210  Q
    ||||||||||||| ||||||||||| || ||||||||||||  ||||||||| |||| |||||||    
T  2353421 atgacggagcatcgtatgatattttaggctatgtttttagttgttttctttgcatttgaagacaa 2353357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 9121052 - 9121108
Alignment:
Q  262 aaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttc 318  Q
    ||||||||||||||||||| ||||| || |||||||||| |||| ||||||||||||    
T  9121052 aaatcgtaacaagtaataaggtagtaagtttatcgttctccacatggattgtcgttc 9121108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 20446171 - 20446262
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtactttt-ctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    ||||||| ||||| ||||||||||||| | | ||||||||| ||||||| ||||| |||| ||||||| || |||||||||||||| ||||||    
T  20446171 tgatgacagagcaacatatgatattttagct-atgtttttaatactttttctttgcatttgaagacaattaagatgagaattagaggagttgt 20446262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 319
Target Start/End: Complemental strand, 21473094 - 21473006
Alignment:
Q  231 gttgttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||||||||||||||||||| ||||| ||  ||||| |||||||| |||||||||| || || || |||| ||||  ||||||||||||    
T  21473094 gttgttgatggacgaaattatcaagtgcaccaaatcataacaagttataaagtagtaagtttctcattctccacaaagattgtcgttca 21473006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 23124833 - 23124924
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgtt 236  Q
    |||||| |||||||||| ||| ||||||   |||||||||||||| |||||||  |||| |||||||||| ||||||| |||||| |||||||    
T  23124833 tgatgatggagcatcatctgacattttttactatgtttttagtac-tttctttacatttgaagacaaataagatgagatttagaggagttgtt 23124924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 14074547 - 14074465
Alignment:
Q  236 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||||||||||| | | |||| ||  ||||||||||||||||||||||||| || |||||| |||||||| |||||||| ||||    
T  14074547 tgatggacgaaactggaaagtgcacaaaatcgtaacaagtaataaagtagtaagtttatcg-tcttcacatggattgtcattca 14074465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 14384575 - 14384493
Alignment:
Q  236 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||||||||||| | | |||| ||  ||||||||||||||||||||||||| || |||||| |||||||| |||||||| ||||    
T  14384575 tgatggacgaaactggaaagtgcacaaaatcgtaacaagtaataaagtagtaagtttatcg-tcttcacatggattgtcattca 14384493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 16536811 - 16536689
Alignment:
Q  89 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac 188  Q
    |||||||||  |||| |||| |||||||||||  |||  |||||||||  ||||||||||| ||| |||||| |||||||||  |||||| |||| ||      
T  16536811 taacttctttttattttgttgcttgaggacaaacaacaatttaagtttaaggttgtgatgatggaacatcatctgatattttaagttatg-ttttggtta 16536713  T
Q  189 ttttctttgaatttaaagacaaat 212  Q
    ||||||||| |||| |||||||||    
T  16536712 ttttctttgcatttgaagacaaat 16536689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 212
Target Start/End: Complemental strand, 16577513 - 16577387
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    |||||||||||||  |||| | || |||||||||||  |||  |||||||||  ||||||||||| ||| ||||||||||||||||  | ||||||||      
T  16577513 attctaacttctttttatttttttgcttgaggacaaacaacaatttaagtttaaggttgtgatgatggaacatcatatgatattttaaggtatgttttgg 16577414  T
Q  185 gtacttttctttgaatttaaagacaaat 212  Q
     || ||||||||| |||| |||||||||    
T  16577413 cta-ttttctttgcatttgaagacaaat 16577387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 212
Target Start/End: Original strand, 16588149 - 16588275
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    |||||||||||||  |||| | || |||||||||||  |||  |||||||||  ||||||||||| ||| ||||||||||||||||  | ||||||||      
T  16588149 attctaacttctttttatttttttgcttgaggacaaacaacaatttaagtttaaggttgtgatgatggaacatcatatgatattttaaggtatgttttgg 16588248  T
Q  185 gtacttttctttgaatttaaagacaaat 212  Q
     || ||||||||| |||| |||||||||    
T  16588249 cta-ttttctttgcatttgaagacaaat 16588275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 16628851 - 16628973
Alignment:
Q  89 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac 188  Q
    |||||||||  |||| |||| |||||||||||  |||  |||||||||  ||||||||||| ||| |||||| |||||||||  |||||| |||| ||      
T  16628851 taacttctttttattttgttgcttgaggacaaacaacaatttaagtttaaggttgtgatgatggaacatcatctgatattttaagttatg-ttttggtta 16628949  T
Q  189 ttttctttgaatttaaagacaaat 212  Q
    ||||||||| |||| |||||||||    
T  16628950 ttttctttgcatttgaagacaaat 16628973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 1074341 - 1074422
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatat 167  Q
    |||||| |||||||||||| ||||  ||| ||||||| |||| ||||||||| |||||||||||| | ||||| |||||||||    
T  1074341 attctaccttcttgctattttgttgtttggggacaagcaacgatttaagtttagggttgtgatgatgtagcat-atatgatat 1074422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 7956058 - 7956119
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtga 146  Q
    |||||| | ||||| |||| |||| ||| ||||||||||||| |||||||||||||||||||    
T  7956058 attctaccgtcttgatattttgttgcttcaggacaagaaacgatttaagtttggggttgtga 7956119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 18496498 - 18496555
Alignment:
Q  145 gatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaattt 202  Q
    ||||| |||||| ||||||||||||| || ||||||||||||| ||||||||| ||||    
T  18496498 gatgatggagcaccatatgatattttaggctatgtttttagtagttttctttgcattt 18496555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 21545984 - 21545929
Alignment:
Q  144 tgatgacggagcat---catatgatatttttggttatgtttttagtacttttcttt 196  Q
    ||||||||||||||   |||||||||||||||  ||||||||||||||||||||||    
T  21545984 tgatgacggagcatgatcatatgatatttttgactatgtttttagtacttttcttt 21545929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 13287676 - 13287716
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  13287676 cttgaggacaagaaacagtctaagtttggggttgtgatgac 13287716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 26137074 - 26137034
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  26137074 cttgaggacaaggaacggttcaagtttggggttgtgatgac 26137034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 9071451 - 9071392
Alignment:
Q  241 gacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 300  Q
    |||||||||||||| | ||| |||||||||||||||| |||||||| || || |||||||    
T  9071451 gacgaaattagcaactgcatcaaatcgtaacaagtaaaaaagtagtaagtttttcgttct 9071392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 7815267 - 7815332
Alignment:
Q  156 atcatatgatatttttggttatgtttttagtacttttct-ttgaatttaaagacaaataggatgaga 221  Q
    ||||||||||||||| ||||||||||||||||||||| | ||| |||| |||| ||||| |||||||    
T  7815267 atcatatgatatttt-ggttatgtttttagtacttttttgttgcatttgaagataaataagatgaga 7815332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 22532830 - 22532784
Alignment:
Q  140 gttgtgatgacggagcatcatatgatatttttggttatgtttttagt 186  Q
    ||||| |||| |||||||||||||||||||| || ||||||||||||    
T  22532830 gttgtaatgatggagcatcatatgatattttaggctatgtttttagt 22532784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 2506786 - 2506826
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  2506786 cttgaggacaagcaactatttaagtttggggttgtgatgac 2506826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 4091345 - 4091429
Alignment:
Q  235 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||||| |||||||| ||||||  |  ||||||||||||||||||||||||| || || || || || ||| |||||||| ||||    
T  4091345 ttgatgaacgaaattggcaagtgtaccaaatcgtaacaagtaataaagtagtaagtttttcatttttaacatggattgtcattca 4091429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 4596958 - 4596918
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  4596958 cttgaggacaaggaatggttcaagtttggggttgtgatgac 4596918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 15170730 - 15170770
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| ||| ||||| ||||||||||||||||||    
T  15170730 cttgaggacaagcaacagtttatgtttggggttgtgatgac 15170770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 19154949 - 19154909
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| ||| | ||||||||||||||||||||||    
T  19154949 cttgaggacaagcaacagattaagtttggggttgtgatgac 19154909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 20754348 - 20754308
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| ||| | ||||||||||||||||||||||    
T  20754348 cttgaggacaagcaacagattaagtttggggttgtgatgac 20754308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 39270239 - 39270279
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  39270239 cttgaggacaagcaacaatttaagtttggggttgtgatgac 39270279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 24120107 - 24120254
Alignment:
Q  88 ctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagta 187  Q
    ||||||| |||||||||||||  ||||||||||| |||  ||||  || ||||||||||||||| | ||||||||||||||||| | |||||||||||||    
T  24120107 ctaacttattgctattgtgttgattgaggacaagcaacattttattttgggggttgtgatgacgaatcatcatatgatattttttgctatgtttttagta 24120206  T
Q  188 cttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    |||||||||| |||| |||| ||||| ||||||| |||||| ||||||    
T  24120207 cttttctttgcatttgaagagaaataagatgagagttagaggagttgt 24120254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 16052519 - 16052369
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    |||||||||||||||||||||| | |   |||||||   |  |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  16052519 attctaacttcttgctattgtgctgcaaaaggacaaacgagagtttaagtttagggttgtgatgacggagcatcatatgatatttttggctatgttttta 16052420  T
Q  185 gtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    |||||||| |||| |||| | ||||||||  |||||| |||||| ||||||    
T  16052419 gtacttttatttgcatttgaggacaaataaaatgagagttagaggagttgt 16052369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 22894768 - 22894648
Alignment:
Q  93 ttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtactttt 192  Q
    |||||||||||||||||||||||||||||  || ||||||||||| | |||||||||| ||||||||||||| |||||| | ||||||||||||||||||    
T  22894768 ttcttgctattgtgtttcttgaggacaagggacagtttaagtttgagattgtgatgacagagcatcatatgacatttttaggtatgtttttagtactttt 22894669  T
Q  193 ctttgaatttaaagacaaata 213  Q
    ||| | |||| ||| ||||||    
T  22894668 cttcgcatttgaagccaaata 22894648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 28252571 - 28252481
Alignment:
Q  137 ggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattaga 227  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||| || | ||||||||||||||| ||||||| |||||    
T  28252571 ggggttgtgatgaaggagcatcatatgatattttttgttatgtttttaatacttttattcgtatttaaagacaaataagatgagagttaga 28252481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 28901582 - 28901432
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    ||||||||||||||||| |||||| |||||| ||||| |||| |||||||||   ||||||||   |||||||||||||| |||||||| |||| |||||    
T  28901582 attctaacttcttgctactgtgttgcttgagaacaagcaacgatttaagtttctagttgtgatattggagcatcatatgaaatttttggctatgctttta 28901483  T
Q  185 gtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
     |||||||||||| |||| || ||||||| | |||||  ||||| ||||||    
T  28901482 atacttttctttgcatttgaatacaaataagttgagagatagaggagttgt 28901432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 10866861 - 10867011
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgttttta 184  Q
    |||||| ||| |||||||| |||  |||||||||||  || ||||||| |||||||||||||||| ||| ||||||||||||||||| | |||| |||||    
T  10866861 attctatctttttgctattttgtagcttgaggacaaacaaaggtttaattttggggttgtgatgatggaacatcatatgatattttttggtatgatttta 10866960  T
Q  185 gtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    ||  |||||||||||||  ||| |||||| || |  | |||||||||||||    
T  10866961 gttattttctttgaattcgaaggcaaataagaggtcatttagagtagttgt 10867011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 13082137 - 13082029
Alignment:
Q  127 gtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaatta 225  Q
    ||||||||||||||||||||||||  | |||||||||| | ||||| ||||||||||||||| ||||||||| |||| |||||||||| ||||||| |||    
T  13082137 gtttaagtttggggttgtgatgacaaaacatcatatgaca-ttttgattatgtttttagtactttttctttgcatttgaagacaaataagatgagagtta 13082039  T
Q  226 gagtagttgt 235  Q
    ||| ||||||    
T  13082038 gaggagttgt 13082029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 5570386 - 5570305
Alignment:
Q  89 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttt 170  Q
    |||||||||  |||||||||  ||||| ||||| |||  |||||||||||||||||||| ||||||||||||||||||||||    
T  5570386 taacttcttattattgtgttgtttgagtacaagcaacaatttaagtttggggttgtgataacggagcatcatatgatatttt 5570305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 235
Target Start/End: Original strand, 12956431 - 12956512
Alignment:
Q  154 gcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    ||||||| |||||||||||  ||||||||||||||||||||||| |||| |||| ||||| ||||||| |||||| ||||||    
T  12956431 gcatcatgtgatatttttgtctatgtttttagtacttttctttgcatttgaagataaataagatgagagttagaggagttgt 12956512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 235
Target Start/End: Complemental strand, 14977280 - 14977199
Alignment:
Q  154 gcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    ||||||||||||||||||   ||||||||||| ||||||||||| |||| |||||||||| ||||||| |||||| ||||||    
T  14977280 gcatcatatgatatttttaactatgtttttagcacttttctttgcattttaagacaaataagatgagagttagaggagttgt 14977199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 172
Target Start/End: Complemental strand, 28973573 - 28973490
Alignment:
Q  89 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttg 172  Q
    |||||||||| |||||||||||||   |||||| ||| |||||||||||||||||  |||||  | ||||||||||||||||||    
T  28973573 taacttcttgttattgtgtttcttaccgacaagcaactgtttaagtttggggttgcaatgacaaaacatcatatgatatttttg 28973490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 237 - 319
Target Start/End: Complemental strand, 13305721 - 13305639
Alignment:
Q  237 gatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||||||| |||||| |   |||| |||||||||||||||||||| || ||||||||||  ||| |||||||||||||    
T  13305721 gatggacgaaattggcaagtgcgcaaaattgtaacaagtaataaagtagttagtttatcgttctctacatggattgtcgttca 13305639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 11310379 - 11310318
Alignment:
Q  152 gagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 213  Q
    |||||||||||||||||||| | |||||||||||||||| |||||| |||| |||| |||||    
T  11310379 gagcatcatatgatattttttgctatgtttttagtacttatctttgcatttgaagaaaaata 11310318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 16054225 - 16054317
Alignment:
Q  143 gtgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    |||||||| ||||||||||||| | |||||| ||||| |||||||| ||||||||| |||| |||||||||| ||| ||| |||||| ||||||    
T  16054225 gtgatgacagagcatcatatgaca-ttttggctatgtctttagtactttttctttgcatttgaagacaaataagataagagttagaggagttgt 16054317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 26853646 - 26853589
Alignment:
Q  262 aaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||||||||||||||||||| || | |||||||| ||||||||| ||||||||    
T  26853646 aaatcgtaacaagtaataaagtagtaagttcatcgttctccacagggatagtcgttca 26853589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 196
Target Start/End: Original strand, 29291670 - 29291755
Alignment:
Q  111 ttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttcttt 196  Q
    ||||||| ||| |||| |||||||||| |||| |||| ||||| |||||||||||||||| || ||||||||| ||  ||||||||    
T  29291670 ttgaggataagcaacgatttaagtttgaggttatgattacggaacatcatatgatattttaggctatgttttttgttattttcttt 29291755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 32239219 - 32239310
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    |||||| || ||||| |||||||||||||| ||||||||||| ||||||||||  |||| |||| | ||| ||| | |||||||| ||||||    
T  32239219 tgatgatggtgcatcgtatgatatttttggctatgtttttagcacttttctttacatttgaagatagataagataataattagaggagttgt 32239310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 6358629 - 6358727
Alignment:
Q  143 gtgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagagtagttgttgatgg 241  Q
    |||||||| |||||  |||||| ||||| || |||||||||||||||||| |||| |||| |||||| ||| | |||||  ||||| ||||||| ||||    
T  6358629 gtgatgacagagcactatatgacattttgggctatgtttttagtacttttatttgcatttgaagacatataagttgagagatagaggagttgttaatgg 6358727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 12957621 - 12957559
Alignment:
Q  235 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgt 297  Q
    |||||||||||||||  ||||| ||  ||||||||||||||||||||||||| || |||||||    
T  12957621 ttgatggacgaaattgacaagtgcactaaatcgtaacaagtaataaagtagtaagcttatcgt 12957559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 28900132 - 28900210
Alignment:
Q  237 gatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||| ||||||||  ||||| ||  |||| ||||||||||||||||||||    |||||||||||||||| ||||||||||||    
T  28900132 gatgaacgaaattgacaagtacaccaaattgtaacaagtaataaagtagt----ttatcgttcttcacagagattgtcgttca 28900210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 32240511 - 32240446
Alignment:
Q  235 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttct 300  Q
    ||||||||| ||||| |||||| ||  |||| |||||||||||||||||||| || ||||||||||    
T  32240511 ttgatggacaaaattggcaagtgcaccaaattgtaacaagtaataaagtagtaagtttatcgttct 32240446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 29047499 - 29047408
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtac-ttttctttgaatttaaagacaaataggatgagaattagagtagttgt 235  Q
    ||||||| |||||||||||||||  ||||| ||| || ||||||| ||||||||| |||| || ||||||| ||||||| |||||| ||||||    
T  29047499 tgatgacagagcatcatatgata-atttggctatattattagtactttttctttgcatttgaaaacaaataagatgagagttagaggagttgt 29047408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 286
Target Start/End: Original strand, 13803096 - 13803147
Alignment:
Q  235 ttgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagt 286  Q
    |||||||||||||||  ||||| ||| |||||||||||||||||||| ||||    
T  13803096 ttgatggacgaaattgacaagtgcatcaaatcgtaacaagtaataaaatagt 13803147  T

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Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 30851284 - 30851230
Alignment:
Q  142 tgtgatgacggagcatcatatgatatttttggttatgtttttagtacttttcttt 196  Q
    |||||||| ||| | ||||||||||||||||| ||||||||||||  ||||||||    
T  30851284 tgtgatgatggaacgtcatatgatatttttggctatgtttttagttattttcttt 30851230  T

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Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 26829427 - 26829472
Alignment:
Q  105 tgtttcttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||| |||||||||||||||| || ||||||||||||||| |||||    
T  26829427 tgttacttgaggacaagaaacagtctaagtttggggttgtaatgac 26829472  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 25180687 - 25180727
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||| |||||||  |||||||||||||||||||||||    
T  25180687 cttgaggataagaaactatttaagtttggggttgtgatgac 25180727  T

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Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 29765357 - 29765397
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  29765357 cttgaggacaagcaacaatttaagtttggggttgtgatgac 29765397  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 30543711 - 30543763
Alignment:
Q  160 tatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaat 212  Q
    |||||||||||| | ||||||||||||| |||| |||| |||| |||||||||    
T  30543711 tatgatatttttagctatgtttttagtatttttttttgcatttgaagacaaat 30543763  T

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Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 33878272 - 33878232
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  33878272 cttgaggacaaggaatggttcaagtttggggttgtgatgac 33878232  T

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Target: scaffold0282 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 22783 - 22661
Alignment:
Q  89 taacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagtac 188  Q
    |||||||||||||||||||| ||||||| |||| |||  ||||||||||||||||||||||  || ||||||||   |||||||| ||||||||| ||||    
T  22783 taacttcttgctattgtgttgcttgagggcaagcaacactttaagtttggggttgtgatgatagaccatcatataccatttttggctatgttttttgtac 22684  T
Q  189 ttttctttgaatttaaagacaaa 211  Q
    |||| |||| |||| ||||||||    
T  22683 ttttatttgcatttgaagacaaa 22661  T

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Target: scaffold1026 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 2071 - 1952
Alignment:
Q  87 tctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgatgacggagcatcatatgatatttttggttatgtttttagt 186  Q
    ||||||||||||||||| | || ||||| |||||| |||| |||||||||||||||| ||||| |||  || ||||||| |||||   ||||||||||||    
T  2071 tctaacttcttgctatttttttgcttgatgacaagtaacgttttaagtttggggttgcgatgatggaatataatatgatgtttttaactatgtttttagt 1972  T
Q  187 acttttctttgaatttaaag 206  Q
      ||||||||| ||||||||    
T  1971 tattttctttgcatttaaag 1952  T

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Target: scaffold0171 (Bit Score: 44; Significance: 5e-16; HSPs: 3)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 7421 - 7338
Alignment:
Q  236 tgatggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    ||||||||||||||  ||||| ||  ||||||||||||||||||||||||| || |||||||||| |||||| ||| |||||||    
T  7421 tgatggacgaaattgacaagtgcaccaaatcgtaacaagtaataaagtagtaagtttatcgttctccacaggtattatcgttca 7338  T

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Target: scaffold0171; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 6128 - 6205
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgaga 221  Q
    |||||||  |||||||||||  |||||||| ||||||||||||||||||||||  ||||||| ||||||| |||||||    
T  6128 tgatgacatagcatcatatggcatttttggctatgtttttagtacttttctttccatttaaacacaaataagatgaga 6205  T

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Target: scaffold0171; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 21336 - 21398
Alignment:
Q  151 ggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 213  Q
    |||||||||||||||||||||  |||||||||||||  ||||||||| |||| |||| |||||    
T  21336 ggagcatcatatgatattttttattatgtttttagtgtttttctttgcatttgaagaaaaata 21398  T

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Target: scaffold0386 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 8892 - 8816
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgag 220  Q
    |||||| ||| ||||||||||||||||||||||| |||||||||||||| |||  |||| |||| ||||| ||||||    
T  8892 tgatgatggaacatcatatgatatttttggttatttttttagtacttttattttcattttaagaaaaataagatgag 8816  T

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Target: scaffold0386; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 13239 - 13170
Alignment:
Q  159 atatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagag 228  Q
    ||||||||||||| |||||||||||||||||||| |||  || | |||||||||| ||||||| ||||||    
T  13239 atatgatatttttagttatgtttttagtacttttattttcatattaagacaaataagatgagagttagag 13170  T

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Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 446937 - 447014
Alignment:
Q  144 tgatgacggagcatcatatgatatttttggttatgtttttagtactttt-ctttgaatttaaagacaaataggatgaga 221  Q
    ||||||| |||||||||||||||||||| | |||||||||||||||||| ||||  |||| |||||||||| |||||||    
T  446937 tgatgacagagcatcatatgatattttt-gctatgtttttagtacttttcctttacatttgaagacaaataagatgaga 447014  T

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Target: scaffold0103 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 319
Target Start/End: Original strand, 36494 - 36575
Alignment:
Q  238 atggacgaaattagcaagttcatgaaatcgtaacaagtaataaagtagtcagattatcgttcttcacagggattgtcgttca 319  Q
    |||||||||||| |||||| ||  |||||  |||||||||||||||||| || |||| ||||| |||| |||||||||||||    
T  36494 atggacgaaattggcaagtgcaccaaatcacaacaagtaataaagtagtaagtttattgttctccacaaggattgtcgttca 36575  T

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Target: scaffold0188 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 27128 - 27068
Alignment:
Q  153 agcatcatatgatatttttggttatgtttttagtacttttctttgaatttaaagacaaata 213  Q
    ||||||| |||||||||| || ||||||||||||||||||||||| |||| |||| |||||    
T  27128 agcatcacatgatattttcggctatgtttttagtacttttctttgcatttgaagataaata 27068  T

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Target: scaffold0048 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 24001 - 24041
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  24001 cttgaggacaaggaatggtttaagtttggggttgtgatgac 24041  T

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Target: scaffold0048; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 28239 - 28279
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  28239 cttgaggacaaggaacggttcaagtttggggttgtgatgac 28279  T

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Target: scaffold0210 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 25278 - 25216
Alignment:
Q  85 attctaacttcttgctattgtgtttcttgaggacaagaaacggtttaagtttggggttgtgat 147  Q
    |||||||||| || ||||| |||| |||||||||||| |||   |||||||||||||||||||    
T  25278 attctaacttttttctattttgttacttgaggacaagcaacatattaagtttggggttgtgat 25216  T

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Target: scaffold0084 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 28544 - 28585
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgacg 151  Q
    |||||||||||| || |||| |||||||||||||||||||||    
T  28544 cttgaggacaaggaatggttcaagtttggggttgtgatgacg 28585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 3881 - 3841
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  3881 cttgaggacaaggaatggttcaagtttggggttgtgatgac 3841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 1094 - 1054
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  1094 cttgaggacaaggaatggttcaagtttggggttgtgatgac 1054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 3979 - 4023
Alignment:
Q  105 tgtttcttgaggacaagaaacggtttaagtttggggttgtgatga 149  Q
    |||| ||||||||| ||||| |||| |||||||||||||||||||    
T  3979 tgttccttgaggactagaaagggttcaagtttggggttgtgatga 4023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 38422 - 38382
Alignment:
Q  110 cttgaggacaagaaacggtttaagtttggggttgtgatgac 150  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  38422 cttgaggacaagcaacaatttaagtttggggttgtgatgac 38382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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