View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15932_low_68 (Length: 299)
Name: NF15932_low_68
Description: NF15932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15932_low_68 |
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Alignment Details
Target: chr4 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 12849176 - 12848902
Alignment:
| Q |
1 |
agcaaaagcaagtagggttaattaaataagaagataaaacaaaaccctataatgatagttttctttgttttctcgcaaaaacaatctctactatttgaac |
100 |
Q |
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| T |
12849176 |
agcacaagcatgtagggttaattaaataagaagataaaacaaaaccctataatgatagttttctttgttttctcgcaaaaacaatctcttctatttgaac |
12849077 |
T |
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| Q |
101 |
atcacctaggttactgttggttgagctgaattggtggaaaagctttatgagagaaaggtgctgaaaatatggcagagatgatggaaagggaaatggttag |
200 |
Q |
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| T |
12849076 |
atcacctaggttactgttggttgagctgaattggtggaaaagctttatgagagaaaggtgctgaaaatatggcagagatgatggaaagggaaatggttag |
12848977 |
T |
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| Q |
201 |
ttctctattgctacctctacctgcaactgattgagactccaatgaacaacaacaaagtgaagaagaaaatcaagg |
275 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12848976 |
ttctctattgctacctctacctgcaactgattgagactccaatgaacaacaacaaagtgaagaagaaaatcaagg |
12848902 |
T |
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