View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15932_low_92 (Length: 253)

Name: NF15932_low_92
Description: NF15932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15932_low_92
NF15932_low_92
[»] chr8 (1 HSPs)
chr8 (206-252)||(44703704-44703750)


Alignment Details
Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 44703750 - 44703704
Alignment:
206 ttgtgcagtagatcatcaaattacagtgacatgtgtagaagaagaag 252  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
44703750 ttgtgtagtagatcatcaaattacagtgacatgtgtagaagaagaag 44703704  T

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