View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15932_low_95 (Length: 250)
Name: NF15932_low_95
Description: NF15932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15932_low_95 |
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Alignment Details
Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 7646709 - 7646491
Alignment:
| Q |
16 |
atctgactctagctataagtttgcaacatcttaacatnnnnnnngatgcttcatacaataaagactgttttaacctctccacaagcttcatttccacgtt |
115 |
Q |
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| T |
7646709 |
atctgactctagctataagtttgcaacatcttaacatagaaaaagatgcttcatacaataaagactgttttaacctctccacaaacttcatttccacgtt |
7646610 |
T |
|
| Q |
116 |
cactctcttcaaacctttgtcgggaaacttccaccgttagattttgctccaaagctgattcttcacataagatggacaaggctcaacaaaagtctagtag |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
7646609 |
cactctcttcaaacctttgtcgggaaacttccaccgttagattttgctccaaagctgattctgcacataagatggacaaggctcaacaaaagtctagtag |
7646510 |
T |
|
| Q |
216 |
tgagaaaaaggaaactact |
234 |
Q |
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||||||||||||||||||| |
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| T |
7646509 |
tgagaaaaaggaaactact |
7646491 |
T |
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