View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15934_low_20 (Length: 267)
Name: NF15934_low_20
Description: NF15934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15934_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 30936500 - 30936644
Alignment:
| Q |
18 |
aaaaagaagcatataattttcatagcacataaatgctctttctttatatacaaatagaattacatgtgtaaactttattcttgaggccatgcgcaaataa |
117 |
Q |
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| T |
30936500 |
aaaaagaagcatataattttcatagcgcataaatgctctttctttatatacaaatagaattacatgtgtaaactttatccttgaggccatgcgcaaataa |
30936599 |
T |
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| Q |
118 |
cgaaacatgtaactatactcattctaacaaatcataatcttgatc |
162 |
Q |
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| T |
30936600 |
cgaaacatgtaactatactcattctaacaaatcataatcttgatc |
30936644 |
T |
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