View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15934_low_6 (Length: 546)

Name: NF15934_low_6
Description: NF15934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15934_low_6
NF15934_low_6
[»] chr7 (6 HSPs)
chr7 (13-526)||(29465531-29466046)
chr7 (399-497)||(35120159-35120255)
chr7 (410-466)||(40915230-40915286)
chr7 (405-453)||(23351794-23351842)
chr7 (399-451)||(48267934-48267987)
chr7 (410-462)||(2257269-2257321)
[»] chr8 (10 HSPs)
chr8 (396-472)||(6291917-6291992)
chr8 (404-454)||(30698098-30698148)
chr8 (399-453)||(41909879-41909933)
chr8 (391-435)||(9712190-9712234)
chr8 (399-433)||(5108602-5108636)
chr8 (391-428)||(6277812-6277849)
chr8 (401-454)||(11540020-11540072)
chr8 (384-449)||(40605200-40605265)
chr8 (441-473)||(6277847-6277879)
chr8 (404-452)||(24810539-24810587)
[»] chr5 (9 HSPs)
chr5 (393-473)||(11443846-11443926)
chr5 (399-452)||(513924-513977)
chr5 (378-436)||(39986635-39986693)
chr5 (399-471)||(14123979-14124051)
chr5 (399-433)||(5926340-5926374)
chr5 (399-474)||(3325351-3325427)
chr5 (404-460)||(41306215-41306271)
chr5 (410-460)||(36952931-36952981)
chr5 (399-452)||(799841-799894)
[»] chr3 (5 HSPs)
chr3 (390-473)||(34430436-34430519)
chr3 (416-466)||(20196386-20196436)
chr3 (399-453)||(40841843-40841896)
chr3 (399-454)||(32278084-32278139)
chr3 (416-466)||(31301282-31301332)
[»] chr1 (15 HSPs)
chr1 (399-453)||(4692950-4693004)
chr1 (399-454)||(37492664-37492719)
chr1 (394-464)||(39489669-39489738)
chr1 (399-472)||(41816653-41816726)
chr1 (399-453)||(4626729-4626783)
chr1 (399-453)||(7182995-7183049)
chr1 (387-472)||(46073223-46073306)
chr1 (400-435)||(2132332-2132367)
chr1 (410-452)||(43149938-43149980)
chr1 (408-472)||(9623552-9623615)
chr1 (410-474)||(49839895-49839959)
chr1 (359-425)||(46026864-46026930)
chr1 (366-436)||(47962934-47963004)
chr1 (399-436)||(516882-516919)
chr1 (388-436)||(32128724-32128772)
[»] chr6 (4 HSPs)
chr6 (394-496)||(8416246-8416346)
chr6 (399-458)||(737039-737098)
chr6 (397-472)||(17113367-17113441)
chr6 (401-463)||(15915048-15915110)
[»] chr4 (12 HSPs)
chr4 (399-469)||(54541970-54542040)
chr4 (399-458)||(11697381-11697440)
chr4 (400-473)||(8998598-8998671)
chr4 (387-433)||(5537304-5537350)
chr4 (394-436)||(37937132-37937174)
chr4 (392-473)||(23759429-23759510)
chr4 (401-454)||(51205660-51205713)
chr4 (414-470)||(36936367-36936423)
chr4 (399-454)||(31361351-31361406)
chr4 (399-466)||(54537858-54537925)
chr4 (391-453)||(53741208-53741270)
chr4 (399-471)||(52810184-52810256)
[»] chr2 (8 HSPs)
chr2 (399-465)||(40899446-40899512)
chr2 (378-502)||(11102788-11102910)
chr2 (399-454)||(33556370-33556425)
chr2 (417-472)||(45314704-45314759)
chr2 (390-436)||(34400252-34400298)
chr2 (424-466)||(37723903-37723945)
chr2 (416-452)||(598391-598427)
chr2 (406-454)||(42641294-42641342)
[»] scaffold0041 (1 HSPs)
scaffold0041 (410-466)||(57809-57865)


Alignment Details
Target: chr7 (Bit Score: 403; Significance: 0; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 13 - 526
Target Start/End: Original strand, 29465531 - 29466046
Alignment:
Q  13 ttattctatacgattgtttgtttgttttgatataaagttatttttctggcaggtaaagtctgattaattgtttcatacatgaatcaaacttaagttcttt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  29465531 ttattctatacgattgtttgtttgttttgatataaagttatttttttggtaggtaaagtctgattaattgtttcatacatgaatcaaacttaagttcttc 29465630  T
Q  113 taaacaacttgttcttggtatagctcgttaactacttgagcctaattgatttatttgggcttcaannnnnnnnaaataactaaatagtctctcaatttta 212  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||        |||||||||||||||||||||||||||    
T  29465631 taaacaacttgttctcggtatagctcgttaactactcgagcctaattgatttatttgggcttcaattttttttaaataactaaatagtctctcaatttta 29465730  T
Q  213 aaaatagtttcataagtaaatgtcgatttctctctnnnnnnnnnnn-gtaaatatggatcgttataaaatttctaaatttgttttaaattcctctatact 311  Q
    ||||||||||||||||||||||||||||||||||             |||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  29465731 aaaatagtttcataagtaaatgtcgatttctctcaaaaaaaaaaaaagtaaatgtcgatcgttataaaatttctaaatttgttttaaattcctctatact 29465830  T
Q  312 ttattttatcaagttttgatcttttaaaattaggtagattcttaggaaccttggagttttgtcggataccaatatcctctaggcaatatttgtttaacat 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29465831 ttattttatcaagttttgatcttttaaaattaggtagattcttaggaaccttggagttttgtcggataccaatatcctctaggcaatatttgtttaacat 29465930  T
Q  412 ttaaatttattttaaaat-aaattaacatgaaaatatgacatgatattgattgattagatgaatatggtatatactcaactaaactacaagagtattatt 510  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29465931 ttaaatttattttaaaataaaattaatatgaaaatatgacatgatattgattgattagatgaatatggtatatactcaactaaactacaagagtattatt 29466030  T
Q  511 cacctgaaaatatttc 526  Q
    ||||| ||||||||||    
T  29466031 caccttaaaatatttc 29466046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 399 - 497
Target Start/End: Original strand, 35120159 - 35120255
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgattagatgaatatggtatatactcaactaaacta 497  Q
    |||| ||||||||||||||||||||||||||||||||| || ||||||||| |||| || || ||||| || ||| |  |||||||| |||||||||||    
T  35120159 atttatttaacatttaaatttattttaaaataaattaatataaaaatatgatatgacatggaatgattggacgaaca--gtatatacccaactaaacta 35120255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 466
Target Start/End: Complemental strand, 40915286 - 40915230
Alignment:
Q  410 atttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgatt 466  Q
    ||||||||||||||||||||||||| | || |||||||||||| ||||||| |||||    
T  40915286 atttaaatttattttaaaataaattgatataaaaatatgacataatattgaatgatt 40915230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 23351794 - 23351842
Alignment:
Q  405 ttaacatttaaatttattttaaaataaattaacatgaaaatatgacatg 453  Q
    |||| |||| |||| ||||||||||||||||| ||||||||||||||||    
T  23351794 ttaatatttgaattaattttaaaataaattaaaatgaaaatatgacatg 23351842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 451
Target Start/End: Original strand, 48267934 - 48267987
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaa-atatgaca 451  Q
    ||||||| ||| |||||||||||||||| ||||||||| |||||| ||||||||    
T  48267934 atttgttgaacttttaaatttattttaatataaattaatatgaaatatatgaca 48267987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 410 - 462
Target Start/End: Complemental strand, 2257321 - 2257269
Alignment:
Q  410 atttaaatttattttaaaataaattaacatgaaaatatgacatgatattgatt 462  Q
    |||| |||||||||||||||||||||  || || || ||||||||||||||||    
T  2257321 attttaatttattttaaaataaattattataaagatttgacatgatattgatt 2257269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 9e-19; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 396 - 472
Target Start/End: Original strand, 6291917 - 6291992
Alignment:
Q  396 aatatttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgattagatga 472  Q
    ||||||||||||||||||||||| ||||||||||||||||| || ||||||| |||||| ||||||||||| |||||    
T  6291917 aatatttgtttaacatttaaatt-attttaaaataaattaatataaaaatattacatgacattgattgattggatga 6291992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 454
Target Start/End: Complemental strand, 30698148 - 30698098
Alignment:
Q  404 tttaacatttaaatttattttaaaataaattaacatgaaaatatgacatga 454  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  30698148 tttaacatttaaatttattttaaaataaattaaaattaaaatatgacatga 30698098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 399 - 453
Target Start/End: Complemental strand, 41909933 - 41909879
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatg 453  Q
    |||||||||||| ||| ||||||||||||||||||||| || |||||||||||||    
T  41909933 atttgtttaacaattatatttattttaaaataaattaatataaaaatatgacatg 41909879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 435
Target Start/End: Original strand, 9712190 - 9712234
Alignment:
Q  391 taggcaatatttgtttaacatttaaatttattttaaaataaatta 435  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||    
T  9712190 taggcaaaatttgtttaacattttaatttattttaaaataaatta 9712234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 5108636 - 5108602
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaat 433  Q
    |||||||||||||||| ||||||||||||||||||    
T  5108636 atttgtttaacatttatatttattttaaaataaat 5108602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 6277812 - 6277849
Alignment:
Q  391 taggcaatatttgtttaacatttaaatttattttaaaa 428  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  6277812 taggcaaaatttgtttaacatttatatttattttaaaa 6277849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 11540072 - 11540020
Alignment:
Q  401 ttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatga 454  Q
    |||||||||||| || |||||||||| ||||||||| || ||||||||||||||    
T  11540072 ttgtttaacattgaa-tttattttaatataaattaatataaaaatatgacatga 11540020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 449
Target Start/End: Complemental strand, 40605265 - 40605200
Alignment:
Q  384 tatcctctaggcaatatttgtttaacatttaaatttattttaaaataaattaacatgaaaatatga 449  Q
    |||||| || |||| |||| ||||| | |||| |||||||||||||||||||| || |||||||||    
T  40605265 tatcctttaagcaaaatttatttaataattaagtttattttaaaataaattaatataaaaatatga 40605200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 473
Target Start/End: Original strand, 6277847 - 6277879
Alignment:
Q  441 aaaatatgacatgatattgattgattagatgaa 473  Q
    |||||||||||||||||||||||||| ||||||    
T  6277847 aaaatatgacatgatattgattgattggatgaa 6277879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 452
Target Start/End: Complemental strand, 24810587 - 24810539
Alignment:
Q  404 tttaacatttaaatttattttaaaataaattaacatgaaaatatgacat 452  Q
    |||||||||| | ||||||||||||||| |||| || ||||||||||||    
T  24810587 tttaacatttgactttattttaaaataagttaaaataaaaatatgacat 24810539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 9e-19; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 393 - 473
Target Start/End: Original strand, 11443846 - 11443926
Alignment:
Q  393 ggcaatatttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgattagatgaa 473  Q
    ||||| |||||||||||||||||||||||||||||||||||||| || ||||||||| ||||  |||| ||||| ||||||    
T  11443846 ggcaaaatttgtttaacatttaaatttattttaaaataaattaatataaaaatatgatatgacgttgaatgattggatgaa 11443926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 452
Target Start/End: Complemental strand, 513977 - 513924
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacat 452  Q
    |||||| ||||||||||||||||||||||||||||||| || ||||||||||||    
T  513977 atttgtgtaacatttaaatttattttaaaataaattaatataaaaatatgacat 513924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 378 - 436
Target Start/End: Complemental strand, 39986693 - 39986635
Alignment:
Q  378 taccaatatcctctaggcaatatttgtttaacatttaaatttattttaaaataaattaa 436  Q
    |||||||||||| |||| || ||||||||||||||| |||||| |||||||||||||||    
T  39986693 taccaatatcctttaggaaaaatttgtttaacatttgaatttactttaaaataaattaa 39986635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 471
Target Start/End: Original strand, 14123979 - 14124051
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgattagatg 471  Q
    ||||||| |||||||||||||||||||||| ||||||| || ||||| |||| ||| ||| ||||||| ||||    
T  14123979 atttgttcaacatttaaatttattttaaaacaaattaatataaaaatttgacttgacattcattgattggatg 14124051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 5926340 - 5926374
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaat 433  Q
    |||||||||||||||||||||||||||||||||||    
T  5926340 atttgtttaacatttaaatttattttaaaataaat 5926374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 474
Target Start/End: Original strand, 3325351 - 3325427
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaat-aaattaacatgaaaatatgacatgatattgattgattagatgaat 474  Q
    |||||||| |||||| ||||||||||||||  ||||||  | |||||||||||||   |||||||||||||||||||    
T  3325351 atttgttttacatttgaatttattttaaaaacaaattactaagaaaatatgacatatcattgattgattagatgaat 3325427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 41306271 - 41306215
Alignment:
Q  404 tttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatattga 460  Q
    ||||| |||||||||||||||||||||| |||| || |||| ||||||| |||||||    
T  41306271 tttaaaatttaaatttattttaaaataacttaatataaaaagatgacataatattga 41306215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 410 - 460
Target Start/End: Original strand, 36952931 - 36952981
Alignment:
Q  410 atttaaatttattttaaaataaattaacatgaaaatatgacatgatattga 460  Q
    |||| |||| ||||||||||||||||| || ||||||||| ||||||||||    
T  36952931 atttgaattcattttaaaataaattaatataaaaatatgaaatgatattga 36952981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 452
Target Start/End: Complemental strand, 799894 - 799841
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacat 452  Q
    |||||||||||| ||||||||||||||| || |||||| || |||| |||||||    
T  799894 atttgtttaacaattaaatttattttaatattaattaatataaaaaaatgacat 799841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 4e-18; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 390 - 473
Target Start/End: Complemental strand, 34430519 - 34430436
Alignment:
Q  390 ctaggcaatatttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgattagatgaa 473  Q
    |||| ||| |||||||||||||||||||||||||||| ||||||||| || |||||||||||||| |||||  |||| ||||||    
T  34430519 ctagacaaaatttgtttaacatttaaatttattttaatataaattaatataaaaatatgacatgacattgaacgattggatgaa 34430436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 466
Target Start/End: Complemental strand, 20196436 - 20196386
Alignment:
Q  416 atttattttaaaataaattaacatgaaaatatgacatgatattgattgatt 466  Q
    ||||||||||||||||| ||| || |||||||||||||||||| |||||||    
T  20196436 atttattttaaaataaaataatatcaaaatatgacatgatattaattgatt 20196386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 453
Target Start/End: Complemental strand, 40841896 - 40841843
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatg 453  Q
    ||||||||||| || ||||||||||||||||||||||| || |||||||||||||    
T  40841896 atttgtttaacctt-aaatttattttaaaataaattaatataaaaatatgacatg 40841843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 454
Target Start/End: Complemental strand, 32278139 - 32278084
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatga 454  Q
    |||||||||| |||| ||||||||||||||||||| || || ||||||| ||||||    
T  32278139 atttgtttaatatttgaatttattttaaaataaatcaatataaaaatataacatga 32278084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 466
Target Start/End: Original strand, 31301282 - 31301332
Alignment:
Q  416 atttattttaaaataaattaacatgaaaatatgacatgatattgattgatt 466  Q
    ||||||||||||||||||| | || ||||||| | ||||||||||||||||    
T  31301282 atttattttaaaataaatttatatcaaaatataaaatgatattgattgatt 31301332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 399 - 453
Target Start/End: Original strand, 4692950 - 4693004
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatg 453  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  4692950 atttgtttaacatttaaatttattttaaaataaattaagatgcaaatatgacatg 4693004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 399 - 454
Target Start/End: Complemental strand, 37492719 - 37492664
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatga 454  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||||||||||||    
T  37492719 atttgtttaacatttaaatttattttaaaataaattaatgtaaaaatatgacatga 37492664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 394 - 464
Target Start/End: Original strand, 39489669 - 39489738
Alignment:
Q  394 gcaatatttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattga 464  Q
    |||| |||| ||||| |||| |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  39489669 gcaaaatttatttaatatttgaatttattttaaaataaattaatat-aaaatatgacatgatattgattga 39489738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 472
Target Start/End: Complemental strand, 41816726 - 41816653
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgattagatga 472  Q
    |||||||||| ||||||||||||||||||||||||||| || ||||| ||| || | ||||||||||| |||||    
T  41816726 atttgtttaatatttaaatttattttaaaataaattaatataaaaatgtgatataacattgattgattggatga 41816653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 399 - 453
Target Start/End: Complemental strand, 4626783 - 4626729
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatg 453  Q
    |||||||||||||||||| |||||||||||||||||||  | |||||||||||||    
T  4626783 atttgtttaacatttaaacttattttaaaataaattaatgtaaaaatatgacatg 4626729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 399 - 453
Target Start/End: Complemental strand, 7183049 - 7182995
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatg 453  Q
    ||||||||||||||||||||||||||||||| |||| | || |||||||||||||    
T  7183049 atttgtttaacatttaaatttattttaaaatgaattcaaataaaaatatgacatg 7182995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 46073223 - 46073306
Alignment:
Q  387 cctctaggcaatatttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgattagatga 472  Q
    ||||||||||| ||||||  |||||||  ||||||||||||||||||||| ||||||||| || |||  ||||||||||| |||||    
T  46073223 cctctaggcaaaatttgt--aacatttttatttattttaaaataaattaatatgaaaataggatatggcattgattgattggatga 46073306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 435
Target Start/End: Original strand, 2132332 - 2132367
Alignment:
Q  400 tttgtttaacatttaaatttattttaaaataaatta 435  Q
    ||||||||||||||||||||||||||||||||||||    
T  2132332 tttgtttaacatttaaatttattttaaaataaatta 2132367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 452
Target Start/End: Original strand, 43149938 - 43149980
Alignment:
Q  410 atttaaatttattttaaaataaattaacatgaaaatatgacat 452  Q
    |||||||||||||||||||||||||| | ||||||||||||||    
T  43149938 atttaaatttattttaaaataaattagcgtgaaaatatgacat 43149980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 472
Target Start/End: Complemental strand, 9623615 - 9623552
Alignment:
Q  408 acatttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgattagatga 472  Q
    |||||| |||||||||||| ||||||||| || |||||||||| ||| ||||||| |||||||||    
T  9623615 acatttgaatttattttaatataaattaatatcaaaatatgacgtgacattgatt-attagatga 9623552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 474
Target Start/End: Original strand, 49839895 - 49839959
Alignment:
Q  410 atttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgattagatgaat 474  Q
    ||||||||||||||||||||| |||||  ||||||||||| |||| ||||| | ||| |||||||    
T  49839895 atttaaatttattttaaaatacattaatttgaaaatatgatatgacattgaataattggatgaat 49839959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 425
Target Start/End: Complemental strand, 46026930 - 46026864
Alignment:
Q  359 accttggagttttgtcggataccaatatcctctaggcaatatttgtttaacatttaaatttatttta 425  Q
    |||||||||||| || || ||||  || ||| ||||||| ||||||||||||||| |||||||||||    
T  46026930 accttggagtttggttgggtaccggtaccctataggcaaaatttgtttaacatttgaatttatttta 46026864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 436
Target Start/End: Complemental strand, 47963004 - 47962934
Alignment:
Q  366 agttttgtcggataccaatatcctctaggcaatatttgtttaacatttaaatttattttaaaataaattaa 436  Q
    |||||| |||||||| |||||||| || |||| |||  ||||| ||||  |||||||||||||||||||||    
T  47963004 agttttctcggatacaaatatcctataagcaaaattcatttaaaatttgcatttattttaaaataaattaa 47962934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 516919 - 516882
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaa 436  Q
    |||||||||||||||  |||||||||||||||||||||    
T  516919 atttgtttaacatttgtatttattttaaaataaattaa 516882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 436
Target Start/End: Complemental strand, 32128772 - 32128724
Alignment:
Q  388 ctctaggcaatatttgtttaacatttaaatttattttaaaataaattaa 436  Q
    ||||||||||   |||||||| ||| |||||||||||||||||||||||    
T  32128772 ctctaggcaaatcttgtttaatattcaaatttattttaaaataaattaa 32128724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 9e-16; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 394 - 496
Target Start/End: Complemental strand, 8416346 - 8416246
Alignment:
Q  394 gcaatatttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgattagatgaatatggtatatactcaactaa 493  Q
    |||| ||||||||||||||| |||||||||||  ||||||||| || |||||||||||| | |||||| |||| |||||  |||||| ||||||||| ||    
T  8416346 gcaaaatttgtttaacatttgaatttattttattataaattaatataaaaatatgacattacattgatggattggatga--atggtacatactcaaccaa 8416249  T
Q  494 act 496  Q
    |||    
T  8416248 act 8416246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 458
Target Start/End: Complemental strand, 737098 - 737039
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatatt 458  Q
    |||||||||| |||||  |||||||||||||||||||| || ||||||||||||||||||    
T  737098 atttgtttaatatttatgtttattttaaaataaattaatataaaaatatgacatgatatt 737039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 472
Target Start/End: Complemental strand, 17113441 - 17113367
Alignment:
Q  397 atatttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgattagatga 472  Q
    ||||||||| ||||||| ||||||||| |||||||||||| || |||||||| |||||  ||||||||||||||||    
T  17113441 atatttgttgaacattttaatttatttaaaaataaattaatat-aaaatatgtcatgaccttgattgattagatga 17113367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 15915110 - 15915048
Alignment:
Q  401 ttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattg 463  Q
    |||||||| |||||| || |||||||  |||||||| |||||||||| |||||||||||||||    
T  15915110 ttgtttaatatttaatttaattttaacttaaattaatatgaaaatataacatgatattgattg 15915048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 399 - 469
Target Start/End: Original strand, 54541970 - 54542040
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgattaga 469  Q
    |||||||||| |||| |||||||||||||||||||||| ||||||| ||||||||| ||||| | ||||||    
T  54541970 atttgtttaatatttgaatttattttaaaataaattaaaatgaaaaaatgacatgacattgaataattaga 54542040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 458
Target Start/End: Complemental strand, 11697440 - 11697381
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatatt 458  Q
    ||||||||||||||| |||||||||||||||||||||| || |||||||  |||||||||    
T  11697440 atttgtttaacatttgaatttattttaaaataaattaatataaaaatatagcatgatatt 11697381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 473
Target Start/End: Original strand, 8998598 - 8998671
Alignment:
Q  400 tttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgattagatgaa 473  Q
    |||||||||||||| |||||| ||||||||||||||| || ||||||||| |||   |||||||||| ||||||    
T  8998598 tttgtttaacatttgaatttaatttaaaataaattaatataaaaatatgatatgtatttgattgatttgatgaa 8998671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 433
Target Start/End: Complemental strand, 5537350 - 5537304
Alignment:
Q  387 cctctaggcaatatttgtttaacatttaaatttattttaaaataaat 433  Q
    ||||||| ||| |||||||||||||||| ||||||||||||||||||    
T  5537350 cctctagacaaaatttgtttaacatttatatttattttaaaataaat 5537304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 436
Target Start/End: Original strand, 37937132 - 37937174
Alignment:
Q  394 gcaatatttgtttaacatttaaatttattttaaaataaattaa 436  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  37937132 gcaatatttgttttacatttgaatttattttaaaataaattaa 37937174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 392 - 473
Target Start/End: Complemental strand, 23759510 - 23759429
Alignment:
Q  392 aggcaatatttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgattagatgaa 473  Q
    |||||| | ||||||| ||||||||||||||||| |||||||||  ||||| |||| ||||   ||||||||||| ||||||    
T  23759510 aggcaaaacttgtttaccatttaaatttattttagaataaattagtatgaagatataacatagcattgattgattggatgaa 23759429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 51205713 - 51205660
Alignment:
Q  401 ttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatga 454  Q
    |||||||| |||| |||||||||||||||||||||| || ||||||| ||||||    
T  51205713 ttgtttaatatttgaatttattttaaaataaattaatataaaaatataacatga 51205660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 470
Target Start/End: Original strand, 36936367 - 36936423
Alignment:
Q  414 aaatttattttaaaataaattaacatgaaaatatgacatgatattgattgattagat 470  Q
    ||||| ||||||||||||||||| || |||||||||||| ||||| | |||||||||    
T  36936367 aaattcattttaaaataaattaatataaaaatatgacataatattaaatgattagat 36936423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 454
Target Start/End: Original strand, 31361351 - 31361406
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatga 454  Q
    ||||||||||  |||||||||||||||| ||||||||| || ||||| ||||||||    
T  31361351 atttgtttaatttttaaatttattttaatataaattaatattaaaatgtgacatga 31361406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 466
Target Start/End: Complemental strand, 54537925 - 54537858
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgatt 466  Q
    |||||||| |||||| |||| ||||| || |||||||| || ||||||| |||||||||||| |||||    
T  54537925 atttgttttacattttaattcatttttaagtaaattaatataaaaatataacatgatattgaatgatt 54537858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 453
Target Start/End: Original strand, 53741208 - 53741270
Alignment:
Q  391 taggcaatatttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatg 453  Q
    ||||||| ||||| ||||| | | |||||||||||| ||||||||| || |||||||||||||    
T  53741208 taggcaaaatttggttaacttctgaatttattttaatataaattaatataaaaatatgacatg 53741270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 471
Target Start/End: Original strand, 52810184 - 52810256
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgattagatg 471  Q
    |||| ||||| ||||||||||||||||| ||||||||| || ||||  | | |||||||||| ||||| ||||    
T  52810184 atttatttaaaatttaaatttattttaatataaattaatataaaaaagtaaaatgatattgaatgattggatg 52810256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 399 - 465
Target Start/End: Original strand, 40899446 - 40899512
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgat 465  Q
    |||| ||| ||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  40899446 atttatttgacatttttatttattttaaaataaattaatatgaaaatatgacatgttattgattgat 40899512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 378 - 502
Target Start/End: Original strand, 11102788 - 11102910
Alignment:
Q  378 taccaatatcctctaggcaatatttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgattagatgaatatg 477  Q
    |||| ||||||| || |||| ||| |||||| ||||||||||||||||||||||||||| |  |||| |||| |||| ||| | |||||||||||  | |    
T  11102788 taccgatatcctataagcaaaattcgtttaaaatttaaatttattttaaaataaattaatacaaaaaaatgatatgacattaaatgattagatga--aag 11102885  T
Q  478 gtatatactcaactaaactacaaga 502  Q
     || ||| |||||||||||||||||    
T  11102886 atacatattcaactaaactacaaga 11102910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 399 - 454
Target Start/End: Original strand, 33556370 - 33556425
Alignment:
Q  399 atttgtttaacatttaaatttattttaaaataaattaacatgaaaatatgacatga 454  Q
    |||||||||||| |||||||||||||||||||||| || || ||||||| ||||||    
T  33556370 atttgtttaacagttaaatttattttaaaataaatcaatataaaaatataacatga 33556425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 472
Target Start/End: Original strand, 45314704 - 45314759
Alignment:
Q  417 tttattttaaaataaattaacatgaaaatatgacatgatattgattgattagatga 472  Q
    ||||||||||||||||||||  ||||||||||| |||||||| | |||||||||||    
T  45314704 tttattttaaaataaattaatgtgaaaatatgatatgatattaaatgattagatga 45314759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 436
Target Start/End: Original strand, 34400252 - 34400298
Alignment:
Q  390 ctaggcaatatttgtttaacatttaaatttattttaaaataaattaa 436  Q
    ||||| || ||||||||||| ||||||||||||||||||||||||||    
T  34400252 ctaggtaaaatttgtttaacttttaaatttattttaaaataaattaa 34400298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 37723903 - 37723945
Alignment:
Q  424 taaaataaattaacatgaaaatatgacatgatattgattgatt 466  Q
    ||||||||||||| ||||||||||||||||| |||||||||||    
T  37723903 taaaataaattaatatgaaaatatgacatgagattgattgatt 37723945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 452
Target Start/End: Original strand, 598391 - 598427
Alignment:
Q  416 atttattttaaaataaattaacatgaaaatatgacat 452  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  598391 atttattttaaaatagattaacataaaaatatgacat 598427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 454
Target Start/End: Original strand, 42641294 - 42641342
Alignment:
Q  406 taacatttaaatttattttaaaataaattaacatgaaaatatgacatga 454  Q
    ||||||||||||||||||||||||||| | | || ||||| ||||||||    
T  42641294 taacatttaaatttattttaaaataaaattatataaaaatgtgacatga 42641342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 466
Target Start/End: Original strand, 57809 - 57865
Alignment:
Q  410 atttaaatttattttaaaataaattaacatgaaaatatgacatgatattgattgatt 466  Q
    ||||||||||||||||||||||||| | || |||||||||||| ||||||| |||||    
T  57809 atttaaatttattttaaaataaattgatataaaaatatgacataatattgaatgatt 57865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University