View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15935_high_6 (Length: 250)
Name: NF15935_high_6
Description: NF15935
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15935_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 10 - 234
Target Start/End: Original strand, 51963936 - 51964160
Alignment:
| Q |
10 |
attattcttcttcataaaaaacatatgtgacattagcattaaatatattttgtagacaggccaactgatatctattctagccgggttgtaaatgcataaa |
109 |
Q |
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| T |
51963936 |
attattcttcttcataaaaaacatatgtgacattagcattaaatatattttgtagacaggccaactgatatctattctagccgggttgtaaatgcataaa |
51964035 |
T |
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| Q |
110 |
tattgatcaattatttagtttaattgaaatgtgaaacgtgggcacaaattccccataggaaaaaggaagaattgagaaggcaatgataagcaatctctat |
209 |
Q |
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| T |
51964036 |
tattgatcaattatttagtttaattgaaaggtgaaacgtgggcacaaattccccataggaaaaaggaagaattgagaaggcaatgataagcaatctctat |
51964135 |
T |
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| Q |
210 |
cgggtgttgtacagacagagttaac |
234 |
Q |
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| T |
51964136 |
cgggtgttgtacagacagagttaac |
51964160 |
T |
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