View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15935_low_11 (Length: 202)

Name: NF15935_low_11
Description: NF15935
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15935_low_11
NF15935_low_11
[»] scaffold0110 (2 HSPs)
scaffold0110 (12-147)||(45534-45670)
scaffold0110 (88-145)||(45804-45861)
[»] chr6 (34 HSPs)
chr6 (7-144)||(33971994-33972131)
chr6 (8-146)||(18241852-18241992)
chr6 (8-146)||(23250590-23250729)
chr6 (8-144)||(11656698-11656836)
chr6 (9-144)||(30388062-30388197)
chr6 (8-145)||(21032195-21032335)
chr6 (19-145)||(10039675-10039801)
chr6 (95-147)||(31598732-31598784)
chr6 (88-146)||(21031977-21032035)
chr6 (8-75)||(3403759-3403826)
chr6 (88-145)||(3403986-3404044)
chr6 (9-75)||(31598043-31598109)
chr6 (88-141)||(3825530-3825583)
chr6 (88-145)||(13579648-13579705)
chr6 (94-144)||(3403717-3403768)
chr6 (9-75)||(31598527-31598593)
chr6 (95-139)||(12714436-12714481)
chr6 (94-147)||(31598276-31598329)
chr6 (94-147)||(33655118-33655171)
chr6 (13-61)||(33658661-33658709)
chr6 (94-145)||(33829639-33829691)
chr6 (94-144)||(33828990-33829041)
chr6 (89-131)||(30388360-30388402)
chr6 (94-146)||(7654551-7654604)
chr6 (94-141)||(23250773-23250821)
chr6 (92-147)||(2762776-2762830)
chr6 (9-40)||(13579457-13579488)
chr6 (88-139)||(2762611-2762664)
chr6 (88-139)||(10039840-10039893)
chr6 (88-145)||(23250889-23250946)
chr6 (89-139)||(11656608-11656660)
chr6 (94-146)||(29074375-29074427)
chr6 (94-146)||(29079139-29079191)
chr6 (94-146)||(29106948-29107000)
[»] chr5 (50 HSPs)
chr5 (8-146)||(18433233-18433372)
chr5 (12-145)||(25175071-25175206)
chr5 (9-144)||(34577082-34577217)
chr5 (12-145)||(25115979-25116116)
chr5 (16-145)||(22428933-22429061)
chr5 (8-142)||(5779567-5779699)
chr5 (8-62)||(26020667-26020721)
chr5 (12-144)||(9665748-9665879)
chr5 (94-145)||(22429199-22429250)
chr5 (94-141)||(31569910-31569957)
chr5 (94-147)||(26020447-26020501)
chr5 (94-146)||(41383170-41383222)
chr5 (94-144)||(18433015-18433066)
chr5 (93-144)||(22729008-22729059)
chr5 (94-141)||(23011385-23011432)
chr5 (94-141)||(41382896-41382943)
chr5 (94-145)||(43464195-43464246)
chr5 (12-62)||(12441096-12441146)
chr5 (94-144)||(23011079-23011129)
chr5 (89-145)||(5187828-5187885)
chr5 (95-145)||(16466746-16466797)
chr5 (94-144)||(18817614-18817665)
chr5 (98-141)||(34576870-34576913)
chr5 (94-144)||(12441042-12441092)
chr5 (88-145)||(33324835-33324893)
chr5 (99-144)||(12441320-12441364)
chr5 (94-146)||(19514966-19515019)
chr5 (94-143)||(22729443-22729492)
chr5 (89-145)||(25115756-25115813)
chr5 (89-145)||(25174848-25174905)
chr5 (94-146)||(34147513-34147566)
chr5 (94-145)||(18816951-18817003)
chr5 (94-146)||(37610200-37610252)
chr5 (94-146)||(37780318-37780370)
chr5 (94-141)||(9665560-9665606)
chr5 (8-55)||(9869649-9869696)
chr5 (94-141)||(10098944-10098991)
chr5 (88-141)||(12441187-12441242)
chr5 (112-146)||(22629466-22629500)
chr5 (94-144)||(37610621-37610671)
chr5 (94-138)||(16726084-16726129)
chr5 (95-143)||(25941018-25941067)
chr5 (98-142)||(2817582-2817626)
chr5 (94-141)||(11351430-11351478)
chr5 (94-145)||(12498566-12498618)
chr5 (94-145)||(12498931-12498983)
chr5 (13-53)||(23011173-23011213)
chr5 (94-145)||(26570728-26570780)
chr5 (94-145)||(26571167-26571219)
chr5 (94-146)||(43463754-43463806)
[»] chr3 (51 HSPs)
chr3 (8-144)||(10293825-10293963)
chr3 (12-146)||(20968716-20968852)
chr3 (8-144)||(9026950-9027086)
chr3 (14-144)||(17372298-17372429)
chr3 (13-137)||(26540790-26540915)
chr3 (94-146)||(47871125-47871177)
chr3 (12-144)||(18875111-18875245)
chr3 (9-144)||(42627463-42627599)
chr3 (13-144)||(45060596-45060728)
chr3 (13-75)||(13657517-13657579)
chr3 (12-145)||(47870822-47870954)
chr3 (92-147)||(17441064-17441120)
chr3 (94-145)||(8315085-8315136)
chr3 (94-144)||(3353128-3353178)
chr3 (12-62)||(3644616-3644666)
chr3 (94-144)||(42673299-42673349)
chr3 (94-145)||(18874881-18874933)
chr3 (98-145)||(45060878-45060926)
chr3 (94-144)||(3644786-3644837)
chr3 (94-140)||(4947263-4947310)
chr3 (94-144)||(8314013-8314064)
chr3 (94-141)||(9026739-9026786)
chr3 (94-141)||(14015967-14016014)
chr3 (94-144)||(20969022-20969073)
chr3 (88-141)||(1101087-1101141)
chr3 (94-144)||(21896514-21896564)
chr3 (94-144)||(42672978-42673028)
chr3 (94-147)||(53687885-53687939)
chr3 (88-144)||(10293608-10293665)
chr3 (88-141)||(26540694-26540747)
chr3 (91-144)||(28702278-28702331)
chr3 (97-145)||(36180996-36181045)
chr3 (98-147)||(40848518-40848567)
chr3 (94-146)||(26007180-26007232)
chr3 (98-145)||(10771503-10771550)
chr3 (13-79)||(14015761-14015827)
chr3 (12-62)||(1100995-1101045)
chr3 (94-144)||(24485463-24485513)
chr3 (96-145)||(42455789-42455839)
chr3 (92-139)||(9026860-9026909)
chr3 (88-141)||(14015867-14015923)
chr3 (94-143)||(17372597-17372645)
chr3 (91-144)||(53688303-53688356)
chr3 (98-145)||(1101188-1101236)
chr3 (27-63)||(4947494-4947530)
chr3 (10-78)||(17440982-17441049)
chr3 (94-142)||(22429599-22429647)
chr3 (94-141)||(23630038-23630086)
chr3 (94-145)||(40848964-40849016)
chr3 (94-145)||(47665910-47665962)
chr3 (94-145)||(48159896-48159948)
[»] chr4 (48 HSPs)
chr4 (8-144)||(11241389-11241526)
chr4 (8-144)||(3930179-3930316)
chr4 (12-146)||(13198826-13198962)
chr4 (8-143)||(8488399-8488534)
chr4 (12-146)||(35393697-35393831)
chr4 (12-145)||(16555514-16555649)
chr4 (13-140)||(49178736-49178866)
chr4 (8-145)||(22681797-22681934)
chr4 (88-145)||(3930477-3930534)
chr4 (12-144)||(27304718-27304850)
chr4 (8-125)||(39415244-39415362)
chr4 (88-143)||(22681576-22681631)
chr4 (94-146)||(24775786-24775839)
chr4 (88-147)||(18077199-18077259)
chr4 (20-75)||(3844411-3844466)
chr4 (12-75)||(5206030-5206093)
chr4 (94-144)||(16555820-16555871)
chr4 (91-144)||(7603419-7603472)
chr4 (94-145)||(5205987-5206039)
chr4 (14-147)||(8182092-8182230)
chr4 (94-145)||(50678778-50678830)
chr4 (94-145)||(56505692-56505744)
chr4 (94-144)||(5206233-5206283)
chr4 (88-143)||(7603146-7603200)
chr4 (94-145)||(11241664-11241715)
chr4 (94-146)||(293220-293273)
chr4 (88-139)||(5206132-5206185)
chr4 (94-146)||(9023683-9023736)
chr4 (94-147)||(26207358-26207411)
chr4 (94-146)||(36095815-36095868)
chr4 (13-61)||(7603199-7603247)
chr4 (94-141)||(36096478-36096526)
chr4 (94-145)||(39744468-39744520)
chr4 (98-145)||(45830203-45830251)
chr4 (91-145)||(9380741-9380796)
chr4 (94-144)||(23540255-23540306)
chr4 (94-144)||(50679427-50679478)
chr4 (98-147)||(39912051-39912101)
chr4 (94-147)||(43051255-43051309)
chr4 (88-143)||(8181992-8182049)
chr4 (94-146)||(8488186-8488239)
chr4 (88-139)||(27304890-27304943)
chr4 (94-146)||(28196776-28196829)
chr4 (94-147)||(48405959-48406012)
chr4 (94-131)||(54509118-54509155)
chr4 (94-145)||(9023243-9023295)
chr4 (94-145)||(28196345-28196397)
chr4 (94-141)||(47219204-47219252)
[»] chr2 (48 HSPs)
chr2 (8-144)||(6171156-6171293)
chr2 (8-144)||(11883842-11883980)
chr2 (12-144)||(30191145-30191279)
chr2 (8-145)||(20347162-20347300)
chr2 (8-144)||(32672842-32672980)
chr2 (8-144)||(40469427-40469565)
chr2 (18-146)||(26737480-26737607)
chr2 (12-145)||(17345955-17346089)
chr2 (33-141)||(15920781-15920890)
chr2 (88-146)||(11883621-11883680)
chr2 (94-147)||(24832328-24832382)
chr2 (94-146)||(6495724-6495777)
chr2 (14-146)||(43495307-43495439)
chr2 (88-146)||(20347461-20347520)
chr2 (88-146)||(40469726-40469785)
chr2 (88-142)||(18055050-18055103)
chr2 (88-145)||(30190922-30190980)
chr2 (94-144)||(40221313-40221363)
chr2 (88-141)||(43495481-43495535)
chr2 (94-146)||(18296696-18296749)
chr2 (89-146)||(32673141-32673198)
chr2 (94-145)||(2639485-2639537)
chr2 (94-145)||(26841586-26841638)
chr2 (95-142)||(15321394-15321440)
chr2 (94-144)||(26737784-26737835)
chr2 (94-147)||(6171459-6171513)
chr2 (94-143)||(6495468-6495517)
chr2 (13-75)||(15321610-15321672)
chr2 (8-62)||(40221395-40221449)
chr2 (94-146)||(2638818-2638871)
chr2 (94-146)||(8851585-8851638)
chr2 (94-143)||(18750129-18750178)
chr2 (95-144)||(43495609-43495658)
chr2 (94-146)||(7980006-7980058)
chr2 (94-145)||(29230281-29230333)
chr2 (94-144)||(7664676-7664727)
chr2 (13-75)||(18055265-18055328)
chr2 (94-144)||(26842241-26842292)
chr2 (94-141)||(41790494-41790541)
chr2 (94-143)||(18296077-18296127)
chr2 (94-147)||(37720201-37720255)
chr2 (96-145)||(41790917-41790967)
chr2 (88-141)||(17345736-17345788)
chr2 (94-145)||(5378660-5378712)
chr2 (94-141)||(7591204-7591252)
chr2 (94-145)||(7664247-7664299)
chr2 (94-141)||(18055319-18055367)
chr2 (94-141)||(29343584-29343632)
[»] chr8 (54 HSPs)
chr8 (8-144)||(34313765-34313900)
chr8 (8-145)||(15155882-15156021)
chr8 (8-144)||(37752333-37752470)
chr8 (12-144)||(12281346-12281480)
chr8 (12-144)||(16929163-16929296)
chr8 (8-144)||(43162234-43162373)
chr8 (8-147)||(18020005-18020143)
chr8 (8-146)||(43246091-43246232)
chr8 (7-75)||(765950-766018)
chr8 (8-125)||(9465790-9465908)
chr8 (12-145)||(33747983-33748117)
chr8 (8-141)||(37669958-37670091)
chr8 (8-147)||(41662104-41662239)
chr8 (13-142)||(74688-74816)
chr8 (8-144)||(23123338-23123478)
chr8 (12-137)||(7127660-7127783)
chr8 (88-144)||(15156182-15156239)
chr8 (88-144)||(43245871-43245928)
chr8 (105-145)||(767720-767760)
chr8 (89-137)||(9930837-9930885)
chr8 (94-146)||(13936721-13936773)
chr8 (88-140)||(43162536-43162588)
chr8 (95-146)||(6092775-6092825)
chr8 (94-144)||(22851390-22851441)
chr8 (88-145)||(16928941-16928999)
chr8 (94-146)||(9823364-9823417)
chr8 (94-146)||(12281122-12281175)
chr8 (13-62)||(22787033-22787082)
chr8 (88-144)||(41662400-41662457)
chr8 (98-146)||(9465605-9465653)
chr8 (94-145)||(13026634-13026686)
chr8 (88-142)||(765736-765791)
chr8 (94-145)||(3463641-3463691)
chr8 (94-144)||(9822748-9822799)
chr8 (94-144)||(37752084-37752135)
chr8 (94-144)||(39724051-39724102)
chr8 (95-144)||(3307338-3307388)
chr8 (16-62)||(3463723-3463769)
chr8 (88-142)||(23123514-23123567)
chr8 (88-142)||(37670253-37670306)
chr8 (94-147)||(25439129-25439182)
chr8 (94-141)||(13027284-13027332)
chr8 (94-145)||(13937392-13937444)
chr8 (94-144)||(3463948-3463999)
chr8 (94-147)||(7127925-7127979)
chr8 (94-144)||(11007563-11007613)
chr8 (14-59)||(11007750-11007796)
chr8 (98-146)||(17431285-17431334)
chr8 (94-146)||(41662519-41662572)
chr8 (8-59)||(9930754-9930806)
chr8 (94-141)||(22786843-22786891)
chr8 (94-141)||(34498125-34498173)
chr8 (94-145)||(34498558-34498610)
chr8 (94-126)||(43598758-43598790)
[»] chr1 (46 HSPs)
chr1 (12-141)||(8108724-8108854)
chr1 (12-145)||(17518302-17518436)
chr1 (8-145)||(41083126-41083265)
chr1 (12-145)||(47955528-47955663)
chr1 (8-146)||(22149401-22149538)
chr1 (19-145)||(31848121-31848247)
chr1 (88-146)||(13589656-13589714)
chr1 (88-142)||(17518599-17518653)
chr1 (94-147)||(20480165-20480218)
chr1 (8-141)||(46057110-46057243)
chr1 (88-147)||(47955303-47955363)
chr1 (94-144)||(50615624-50615674)
chr1 (94-144)||(50623452-50623502)
chr1 (95-144)||(1176717-1176766)
chr1 (94-146)||(8108996-8109049)
chr1 (94-146)||(22149702-22149755)
chr1 (94-146)||(39692003-39692056)
chr1 (94-146)||(49284407-49284460)
chr1 (95-147)||(999109-999161)
chr1 (94-144)||(6002237-6002288)
chr1 (94-144)||(48190771-48190822)
chr1 (88-141)||(1176839-1176893)
chr1 (94-144)||(20371356-20371406)
chr1 (94-144)||(20480615-20480665)
chr1 (94-144)||(27172116-27172166)
chr1 (94-143)||(46056904-46056952)
chr1 (94-143)||(47498498-47498547)
chr1 (14-62)||(1176934-1176982)
chr1 (94-145)||(48191358-48191410)
chr1 (96-147)||(50615237-50615289)
chr1 (96-147)||(50623065-50623117)
chr1 (94-144)||(26814694-26814745)
chr1 (95-145)||(999529-999579)
chr1 (96-146)||(19007733-19007783)
chr1 (95-144)||(41082909-41082959)
chr1 (89-141)||(1177016-1177069)
chr1 (94-147)||(20371037-20371089)
chr1 (95-144)||(49317752-49317801)
chr1 (95-144)||(49318170-49318219)
chr1 (95-144)||(49318447-49318496)
chr1 (94-145)||(26815122-26815174)
chr1 (94-141)||(28634160-28634208)
chr1 (95-146)||(31847893-31847945)
chr1 (94-145)||(32163046-32163098)
chr1 (94-141)||(42611617-42611665)
chr1 (94-145)||(44911024-44911076)
[»] chr7 (56 HSPs)
chr7 (12-146)||(9412021-9412157)
chr7 (12-144)||(3687353-3687489)
chr7 (12-145)||(6908212-6908346)
chr7 (14-141)||(27096264-27096392)
chr7 (14-141)||(27181911-27182039)
chr7 (19-145)||(23686646-23686772)
chr7 (88-143)||(8953886-8953941)
chr7 (13-142)||(29291808-29291939)
chr7 (8-77)||(13772681-13772750)
chr7 (19-119)||(5349489-5349587)
chr7 (94-146)||(13744236-13744288)
chr7 (94-144)||(5349736-5349784)
chr7 (88-145)||(9412322-9412380)
chr7 (94-144)||(23686421-23686471)
chr7 (94-144)||(35079960-35080010)
chr7 (94-147)||(44600138-44600192)
chr7 (94-144)||(48359320-48359370)
chr7 (88-144)||(3687653-3687710)
chr7 (91-143)||(5735253-5735306)
chr7 (88-144)||(13772898-13772955)
chr7 (94-145)||(13772640-13772692)
chr7 (8-75)||(33628604-33628672)
chr7 (14-62)||(34235762-34235810)
chr7 (94-141)||(6908487-6908534)
chr7 (8-75)||(15567060-15567127)
chr7 (94-141)||(22740594-22740641)
chr7 (97-144)||(27096047-27096094)
chr7 (97-144)||(27182209-27182256)
chr7 (19-144)||(38191488-38191619)
chr7 (94-144)||(44599489-44599540)
chr7 (94-147)||(3205096-3205150)
chr7 (94-147)||(17156964-17157018)
chr7 (9-59)||(18925143-18925193)
chr7 (94-147)||(22740153-22740207)
chr7 (8-57)||(5735463-5735512)
chr7 (97-141)||(5735553-5735598)
chr7 (99-147)||(13863964-13864013)
chr7 (94-146)||(20419327-20419380)
chr7 (94-131)||(35080226-35080263)
chr7 (94-145)||(13863312-13863364)
chr7 (95-147)||(33628392-33628444)
chr7 (94-146)||(36527382-36527434)
chr7 (94-145)||(18864405-18864456)
chr7 (94-144)||(18925062-18925113)
chr7 (98-141)||(40017452-40017495)
chr7 (8-62)||(35080034-35080087)
chr7 (94-147)||(37972399-37972453)
chr7 (94-143)||(39983700-39983750)
chr7 (94-143)||(18925325-18925373)
chr7 (94-146)||(38826916-38826969)
chr7 (94-145)||(8643769-8643821)
chr7 (94-145)||(10533033-10533085)
chr7 (94-141)||(18863970-18864018)
chr7 (95-146)||(29292920-29292972)
chr7 (94-145)||(33628663-33628715)
chr7 (94-145)||(37889262-37889314)
[»] scaffold0802 (2 HSPs)
scaffold0802 (19-144)||(1118-1245)
scaffold0802 (88-144)||(1417-1474)
[»] scaffold1221 (2 HSPs)
scaffold1221 (8-141)||(1699-1834)
scaffold1221 (94-144)||(1511-1561)
[»] scaffold0015 (2 HSPs)
scaffold0015 (8-144)||(17071-17209)
scaffold0015 (88-144)||(16853-16908)
[»] scaffold0319 (2 HSPs)
scaffold0319 (9-147)||(6391-6532)
scaffold0319 (88-144)||(6694-6750)
[»] scaffold0001 (4 HSPs)
scaffold0001 (8-145)||(439117-439254)
scaffold0001 (14-141)||(183367-183495)
scaffold0001 (88-144)||(438930-438987)
scaffold0001 (99-146)||(183670-183718)
[»] scaffold0598 (2 HSPs)
scaffold0598 (8-142)||(6609-6742)
scaffold0598 (94-143)||(6879-6927)
[»] scaffold0009 (1 HSPs)
scaffold0009 (8-146)||(205685-205822)
[»] scaffold0192 (2 HSPs)
scaffold0192 (8-75)||(25138-25205)
scaffold0192 (88-146)||(25366-25425)
[»] scaffold0002 (1 HSPs)
scaffold0002 (88-144)||(411923-411979)
[»] scaffold0376 (3 HSPs)
scaffold0376 (94-146)||(7453-7505)
scaffold0376 (88-144)||(7597-7653)
scaffold0376 (19-75)||(7496-7552)
[»] scaffold0433 (1 HSPs)
scaffold0433 (20-75)||(10694-10749)
[»] scaffold0069 (2 HSPs)
scaffold0069 (94-144)||(50510-50560)
scaffold0069 (94-147)||(50072-50124)
[»] scaffold0460 (2 HSPs)
scaffold0460 (95-147)||(327-380)
scaffold0460 (94-144)||(766-816)
[»] scaffold0535 (1 HSPs)
scaffold0535 (95-146)||(10010-10062)
[»] scaffold0328 (2 HSPs)
scaffold0328 (98-144)||(6152-6199)
scaffold0328 (94-144)||(6798-6849)
[»] scaffold0176 (2 HSPs)
scaffold0176 (96-145)||(20048-20098)
scaffold0176 (94-146)||(19619-19671)
[»] scaffold0041 (1 HSPs)
scaffold0041 (94-146)||(38698-38751)


Alignment Details
Target: scaffold0110 (Bit Score: 89; Significance: 4e-43; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 12 - 147
Target Start/End: Complemental strand, 45670 - 45534
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnn-gagggagtgcaaaatcgcacaat 110  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||         |||||||||||||||||||||||    
T  45670 ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggagtgcaaaatcgcacaat 45571  T
Q  111 taacaaaagatagggggaaaagtgcaattaagcctta 147  Q
    |||||||||||||||||||||||||||||||||||||    
T  45570 taacaaaagatagggggaaaagtgcaattaagcctta 45534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 45804 - 45861
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcct 145  Q
    ||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  45804 gagggggtgcaaaatcgcacaattggcaaaagatagggggaaaagtgcaattaagcct 45861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 6e-39; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 7 - 144
Target Start/End: Complemental strand, 33972131 - 33971994
Alignment:
Q  7 tccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgca 106  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||| |||        ||||| ||||||||||| |    
T  33972131 tccccttttcctctcttttaatgatgattttgaacaaaacacaattggcaaaagatagggtgcaaaatcgctcaaaaataagagggggtgcaaaatcgta 33972032  T
Q  107 caattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  33972031 caattaacaaaagataggggaaaaactgcaattaagcc 33971994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 18241992 - 18241852
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgca 106  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||         ||||| |||||||||||||    
T  18241992 ccccttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgcaaaatcgca 18241893  T
Q  107 caattaacaaaagata-gggggaaaagtgcaattaagcctt 146  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  18241892 caattaacaaaagataggggggaaaagtgcaattaagcctt 18241852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 23250729 - 23250590
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaac-aaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgca 106  Q
    |||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| |||        ||||| |||||| ||| ||    
T  23250729 ccccctttcccctcttttaatgatgattttgaacaaaaacacaattggcaaaagatagggcgcaaaatcgctcaaaaaaaagagggggtgcaagatctca 23250630  T
Q  107 caattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  23250629 caattgacaaaagataggggaaaaagtgcaattaagcctt 23250590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 11656698 - 11656836
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgca 106  Q
    ||||||| ||||||||||| |||||||||||||||||||||| |||||||||||| | | |||||||| |||         ||||| |||||||||||||    
T  11656698 cccctttacctctcttttattgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgctcaaaaataaagagggggtgcaaaatcgca 11656797  T
Q  107 caattaacaaaagatagg-gggaaaagtgcaattaagcc 144  Q
    |||||| ||||||||||| | ||||||||||||||||||    
T  11656798 caattagcaaaagataggagagaaaagtgcaattaagcc 11656836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 30388197 - 30388062
Alignment:
Q  9 cccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcaca 108  Q
    ||||||| |||||||||| |||||||||||||||||||| | ||| |||||||| | | |||||||| |||        ||| |  ||||||||||||||    
T  30388197 ccctttttctctcttttattgatgattttgaacaaaacataattgacaaaagatggggtgcaaaatcgctcaaaaaaaagagaggctgcaaaatcgcaca 30388098  T
Q  109 attaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||| |||||||||||||| ||||||||||||||||    
T  30388097 attagcaaaagataggggggaaagtgcaattaagcc 30388062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 21032195 - 21032335
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnn--gagggagtgcaaaatcgc 105  Q
    |||| ||||| ||||||||||||||||||||||||||||||| |||| ||||||| | | |||||||| |||          ||||  | ||||||||||    
T  21032195 ccccctttcccctcttttaatgatgattttgaacaaaacacaattggtaaaagatggggtgcaaaatcgctcaaagaaaaaagaggaggcgcaaaatcgc 21032294  T
Q  106 acaattaacaaaagata-gggggaaaagtgcaattaagcct 145  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  21032295 acaattaacaaaagataggggggaaaagtgcaattaagcct 21032335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 10039801 - 10039675
Alignment:
Q  19 ctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnn-gagggagtgcaaaatcgcacaattaacaaa 117  Q
    |||||||||||||||||||||||||||||||  || |||||||| | | | |||||| |||         ||||| ||||||||||||||||||| ||||    
T  10039801 ctcttttaatgatgattttgaacaaaacacaactgacaaaagatggggtgtaaaatcgctcataaaaaaagaggg-gtgcaaaatcgcacaattagcaaa 10039703  T
Q  118 agatagggggaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||||||||||||    
T  10039702 agatagggggaaaagtgcaattaagcct 10039675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 31598732 - 31598784
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctta 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31598732 tgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaaacctta 31598784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 21032035 - 21031977
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    ||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  21032035 gagggggtgcaaaatcgcacaattagcaaaagttagggggaaaagtgcaattaagcctt 21031977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 3403826 - 3403759
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatc 75  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| | | ||||||||    
T  3403826 ccccttttcctctattttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatc 3403759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 3403986 - 3404044
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcct 145  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  3403986 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 3404044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 31598109 - 31598043
Alignment:
Q  9 cccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatc 75  Q
    |||||| || ||||||||||||||||||||||||||||||| |||||||||||| | | ||||||||    
T  31598109 ccctttccccctcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatc 31598043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 88 - 141
Target Start/End: Complemental strand, 3825583 - 3825530
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 141  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  3825583 gagggggtgcaaaatcgcacaattagcaaaatatagggggaaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 13579648 - 13579705
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcct 145  Q
    ||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||    
T  13579648 gagggggtgcaaaatcgcacaattagcaaacgatagggagaaaagtgcaattaagcct 13579705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 3403768 - 3403717
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  3403768 gtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 3403717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 31598593 - 31598527
Alignment:
Q  9 cccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatc 75  Q
    |||||| || ||||||||||||||||||||||||||||||| ||| |||||||| | | ||||||||    
T  31598593 ccctttccccctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatc 31598527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 139
Target Start/End: Complemental strand, 12714481 - 12714436
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaatt 139  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  12714481 tgcaaaatcgcacaattaacaaaagatagggggcaaaagtgcaatt 12714436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 31598276 - 31598329
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctta 147  Q
    ||||||||||||||||||| |||||||||| ||||||| | |||||||||||||    
T  31598276 gtgcaaaatcgcacaattagcaaaagatagagggaaaaatacaattaagcctta 31598329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 33655118 - 33655171
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctta 147  Q
    ||||||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  33655118 gtgcaaaattgcacaattagcaaaagataaggggacaagtgcaattaagcctta 33655171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 33658661 - 33658709
Alignment:
Q  13 tttcctctcttttaatgatgattttgaacaaaacacagttggcaaaaga 61  Q
    ||||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  33658661 tttcccctcttttaatgatgattttgaacaaaacacaattgacaaaaga 33658709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 33829639 - 33829691
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  33829639 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 33829691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 33829041 - 33828990
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  33829041 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 33828990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 30388360 - 30388402
Alignment:
Q  89 agggagtgcaaaatcgcacaattaacaaaagatagggggaaaa 131  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  30388360 agggggtgcaaaatcgcacaattagcaaaagatagggggaaaa 30388402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 7654551 - 7654604
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcctt 146  Q
    |||||||||||||||||| |||||  ||||||| ||||||||||||||||||||    
T  7654551 gtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 7654604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 23250773 - 23250821
Alignment:
Q  94 gtgcaaaatcgcacaattaa-caaaagatagggggaaaagtgcaattaa 141  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  23250773 gtgcaaaatcgcacaattaaccaaaatataggggtaaaagtgcaattaa 23250821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 2762776 - 2762830
Alignment:
Q  92 gagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctta 147  Q
    ||||| |||||| |||||||||||||||||| |  |||||||||||||||||||||    
T  2762776 gagtgtaaaatcacacaattaacaaaagata-gaagaaaagtgcaattaagcctta 2762830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 40
Target Start/End: Complemental strand, 13579488 - 13579457
Alignment:
Q  9 cccttttcctctcttttaatgatgattttgaa 40  Q
    ||||||||||||||||||||||||||||||||    
T  13579488 cccttttcctctcttttaatgatgattttgaa 13579457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 139
Target Start/End: Complemental strand, 2762664 - 2762611
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaac-aaaagataggggg-aaaagtgcaatt 139  Q
    ||||| ||||||||||||||||||| | ||||||||||||| ||||||||||||    
T  2762664 gagggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 2762611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 10039840 - 10039893
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaac-aaaagataggggg-aaaagtgcaatt 139  Q
    ||||| ||||||||||||||||||| | ||||||||||||| ||||||||||||    
T  10039840 gagggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 10039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 23250889 - 23250946
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcct 145  Q
    ||||| || |||| ||||||||||| ||||||||||||  ||||||||||| ||||||    
T  23250889 gagggggtacaaattcgcacaattagcaaaagatagggcaaaaagtgcaatcaagcct 23250946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 11656660 - 11656608
Alignment:
Q  89 agggagtgcaaaatcgcacaattaacaaaa-gataggggg-aaaagtgcaatt 139  Q
    |||| ||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  11656660 agggggtgcaaaatcgcacaattatcaaaacgatagggggcaaaagtgcaatt 11656608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 29074375 - 29074427
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||  ||||  |||||||| |||| |||||||||||||    
T  29074375 gtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcctt 29074427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 29079139 - 29079191
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||  ||||  |||||||| |||| |||||||||||||    
T  29079139 gtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcctt 29079191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 29106948 - 29107000
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||  ||||  |||||||| |||| |||||||||||||    
T  29106948 gtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcctt 29107000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 18433233 - 18433372
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcac 107  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | | |||||||| |||        ||||| ||||||||||||||    
T  18433233 ccccttttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctcaaaaaaaagagggggtgcaaaatcgcac 18433332  T
Q  108 aattaacaaaagata-gggggaaaagtgcaattaagcctt 146  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  18433333 aattaacaaaagataggggggaaaagtgcaattaagcctt 18433372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 25175071 - 25175206
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgcacaat 110  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||         ||||| |||||||||||||||||    
T  25175071 ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaat 25175170  T
Q  111 taacaaaagata-gggggaaaagtgcaattaagcct 145  Q
    |||||||||||| |||||||||||||||||||||||    
T  25175171 taacaaaagataggggggaaaagtgcaattaagcct 25175206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 34577082 - 34577217
Alignment:
Q  9 cccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcaca 108  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | | |||||||| |||        || || |||||||||| ||||    
T  34577082 cccttttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctcaaaaaaaagatggggtgcaaaatcacaca 34577181  T
Q  109 attaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||| ||||||||||||| |||||||||||||||||    
T  34577182 attagcaaaagataggggaaaaagtgcaattaagcc 34577217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 25115979 - 25116116
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnnga--gggagtgcaaaatcgcaca 108  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||         ||  ||| |||||||||||||||    
T  25115979 ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagaaggggggtgcaaaatcgcaca 25116078  T
Q  109 attaacaaaagata-gggggaaaagtgcaattaagcct 145  Q
    |||||||||||||| |||||||||||||||||||||||    
T  25116079 attaacaaaagataggggggaaaagtgcaattaagcct 25116116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 22429061 - 22428933
Alignment:
Q  16 cctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcacaattaaca 115  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| | | |||||||  |||        || || ||||||||||||||||||| ||    
T  22429061 cctctcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaattgctcaaaaaaa-gatggggtgcaaaatcgcacaattagca 22428963  T
Q  116 aaagatagggggaaaagtgcaattaagcct 145  Q
    |||||||||||| |||||||||||||||||    
T  22428962 aaagataggggggaaagtgcaattaagcct 22428933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 5779699 - 5779567
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcac 107  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||   | ||||||||||||        ||||  |||||||||| |||    
T  5779699 ccccttttcccctcttttaatgatgattttgaacaaaacacaattgtcaaaagatgaggtgcaaaatcactcaaaaaatagagg--gtgcaaaatcacac 5779602  T
Q  108 aattaacaaaagatagggggaaaagtgcaattaag 142  Q
    |||||||||||   || || |||||||||||||||    
T  5779601 aattaacaaaaataagaggcaaaagtgcaattaag 5779567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 26020667 - 26020721
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagat 62  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  26020667 ccccttttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagat 26020721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 9665748 - 9665879
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcacaatt 111  Q
    |||||| ||||||||||  ||||||||||||||||||| || ||||||||| | | |||||||| |||         || | ||||||||| ||||||||    
T  9665748 ttttcccctcttttaatattgattttgaacaaaacacaatttgcaaaagatggggtgcaaaatcgctcaaaaaaaatagtgggtgcaaaat-gcacaatt 9665846  T
Q  112 aacaaaagatagggggaaaagtgcaattaagcc 144  Q
    | ||||||||||||||||||||| |||||||||    
T  9665847 agcaaaagatagggggaaaagtggaattaagcc 9665879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 22429199 - 22429250
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  22429199 gtgcaaaatcgcacaattagcaaaagatagggggaaaaatgcaattaagcct 22429250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 31569957 - 31569910
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 141  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  31569957 gtgcaaaatcgcacaattgacaaaagatagggggaaaagtgcaattaa 31569910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 26020501 - 26020447
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggg-ggaaaagtgcaattaagcctta 147  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  26020501 gtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaattaagcctta 26020447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 41383170 - 41383222
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  41383170 gtgcaaaatcgcacaattagcaaaaaatagggggaaaagttcaattaagcctt 41383222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 18433066 - 18433015
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  18433066 gtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 18433015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 22729059 - 22729008
Alignment:
Q  93 agtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||| |||||  |||||||||||||||||||||||||    
T  22729059 agtgcaaaatcgcacaatttacaaactatagggggaaaagtgcaattaagcc 22729008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 23011385 - 23011432
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 141  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  23011385 gtgcaaaatcgcacaattaacaaaagataagggaaaaagtgcaattaa 23011432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 41382943 - 41382896
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 141  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||    
T  41382943 gtgcaaaatcgcacaattaacaaaagataggggggaaaatgcaattaa 41382896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 43464195 - 43464246
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcct 145  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  43464195 gtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcct 43464246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 12441146 - 12441096
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagat 62  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||||||||    
T  12441146 ttttcccctcttttaatgatgattttgaacaaaacacaattgacaaaagat 12441096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 23011129 - 23011079
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||||||    
T  23011129 gtgcaaaatcgcacaattagcaaaagataaggggaaaaatgcaattaagcc 23011079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 5187828 - 5187885
Alignment:
Q  89 agggagtgcaaaatcgcacaattaacaaaagat-agggggaaaagtgcaattaagcct 145  Q
    |||| ||||||||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  5187828 agggggtgcaaaattgcacaattaacaaaagataaggggcaaaagtgcaattaagcct 5187885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 16466746 - 16466797
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcct 145  Q
    |||||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  16466746 tgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagcct 16466797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 18817614 - 18817665
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  18817614 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 18817665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 34576913 - 34576870
Alignment:
Q  98 aaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 141  Q
    ||||||||||||||| |||||||||||||| |||||||||||||    
T  34576913 aaaatcgcacaattagcaaaagataggggggaaagtgcaattaa 34576870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 12441092 - 12441042
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||||||| |||||||||| |||||||||||  |||||||||||||||||    
T  12441092 gtgcaaaattgcacaattaataaaagatagggaaaaaagtgcaattaagcc 12441042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 33324835 - 33324893
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    ||||| |||||||||| ||||||| ||||||||||||||  ||||||||||||||||||    
T  33324835 gagggggtgcaaaatcacacaattgacaaaagataggggaaaaaagtgcaattaagcct 33324893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 12441320 - 12441364
Alignment:
Q  99 aaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||    
T  12441320 aaatcgcacaattagcaaaagata-ggggaaaagtgcaattaagcc 12441364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 19514966 - 19515019
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcctt 146  Q
    |||||||||||||||||| |||||  ||||||| ||||||||||||||||||||    
T  19514966 gtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 19515019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 22729443 - 22729492
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagc 143  Q
    ||||||||||||||||||  ||||  ||||||||||||||||||||||||    
T  22729443 gtgcaaaatcgcacaattggcaaattatagggggaaaagtgcaattaagc 22729492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 25115813 - 25115756
Alignment:
Q  89 agggagtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcct 145  Q
    |||| |||||||||| |||||||  |||||||||||||| ||||||||||||||||||    
T  25115813 agggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagcct 25115756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 25174905 - 25174848
Alignment:
Q  89 agggagtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcct 145  Q
    |||| |||||||||| |||||||  |||||||||||||| ||||||||||||||||||    
T  25174905 agggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagcct 25174848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 34147513 - 34147566
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcctt 146  Q
    |||||||||||||||||| |||||  |||||||| |||||||||||||||||||    
T  34147513 gtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcctt 34147566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 18817003 - 18816951
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||||||||||| ||||| |||||||||||||    
T  18817003 gtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 18816951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 37610252 - 37610200
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    |||||||||| |||||||  ||||  |||||||||||||||||||||||||||    
T  37610252 gtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaagcctt 37610200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 37780370 - 37780318
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    |||||||||| |||||||  ||||  |||||||||||||||||||||||||||    
T  37780370 gtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaagcctt 37780318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 9665606 - 9665560
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 141  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  9665606 gtgcaaaattgcacaattagcaaaagata-ggggaaaagtgcaattaa 9665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 9869696 - 9869649
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggc 55  Q
    |||| ||||| ||||||||| ||||||||||||||||||||| |||||    
T  9869696 ccccctttcccctcttttaacgatgattttgaacaaaacacaattggc 9869649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 10098944 - 10098991
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 141  Q
    |||||||||||||||||| |||||  ||||| ||||||||||||||||    
T  10098944 gtgcaaaatcgcacaattgacaaactataggaggaaaagtgcaattaa 10098991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 12441187 - 12441242
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaac-aaaagataggggg-aaaagtgcaattaa 141  Q
    |||||||| ||||||||||||||| || ||||||||||||| ||||||||||||||    
T  12441187 gagggagtacaaaatcgcacaattgacaaaaagatagggggcaaaagtgcaattaa 12441242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 146
Target Start/End: Complemental strand, 22629500 - 22629466
Alignment:
Q  112 aacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    |||||||||||||||||||||||||| ||||||||    
T  22629500 aacaaaagatagggggaaaagtgcaactaagcctt 22629466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 37610621 - 37610671
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||| ||||  |||||||| ||||| ||||||||||    
T  37610621 gtgcaaaatcgcacaattagcaaactataggggggaaagtacaattaagcc 37610671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 16726129 - 16726084
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaat 138  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||    
T  16726129 gtgcaaaatcgcacaattggcaaaagatagggggcaaaagtgcaat 16726084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 25941018 - 25941067
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagatagg-gggaaaagtgcaattaagc 143  Q
    |||||||||||| ||||||||||  ||||| |||||||||||||||||||    
T  25941018 tgcaaaatcgcataattaacaaactataggagggaaaagtgcaattaagc 25941067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 2817582 - 2817626
Alignment:
Q  98 aaaatcgcacaattaacaaaagatagggggaaaagtgcaattaag 142  Q
    ||||||||||||||  ||||  |||||||||||||||||||||||    
T  2817582 aaaatcgcacaattcgcaaactatagggggaaaagtgcaattaag 2817626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 11351430 - 11351478
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagg-gggaaaagtgcaattaa 141  Q
    ||||||||||||||||||  ||||||||||| | |||||||||||||||    
T  11351430 gtgcaaaatcgcacaattggcaaaagataggagtgaaaagtgcaattaa 11351478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 12498618 - 12498566
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||  |||||||| ||||||||||||||||||    
T  12498618 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 12498566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 12498931 - 12498983
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||  ||||||| |||||||||||||||||||    
T  12498931 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 12498983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 23011213 - 23011173
Alignment:
Q  13 tttcctctcttttaatgatgattttgaacaaaacacagttg 53  Q
    ||||| ||||||||||||||||||||| ||||||||| |||    
T  23011213 tttcccctcttttaatgatgattttgagcaaaacacatttg 23011173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 26570780 - 26570728
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcct 145  Q
    |||||||||||||||||| |||||  ||| |||||||||||| ||||||||||    
T  26570780 gtgcaaaatcgcacaattgacaaactataggggggaaaagtgtaattaagcct 26570728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 26571167 - 26571219
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||  ||||||| |||||||||||||||||||    
T  26571167 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 26571219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 43463806 - 43463754
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||  ||||  ||| |||||||||||||||||| ||||    
T  43463806 gtgcaaaatcgcacaattggcaaactataaggggaaaagtgcaattaaacctt 43463754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 4e-37; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 10293825 - 10293963
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgca 106  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||         ||||| |||||||||||||    
T  10293825 ccccttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgcaaaatcgca 10293924  T
Q  107 caattaacaaaagata-gggggaaaagtgcaattaagcc 144  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  10293925 caattaacaaaagataggggggaaaagtgcaattaagcc 10293963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 20968852 - 20968716
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgcacaat 110  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||         ||||| |||||||||||||||||    
T  20968852 ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaat 20968753  T
Q  111 taacaaaagata-gggggaaaagtgcaattaagcctt 146  Q
    |||||||||||| |||||||| |||||||||||||||    
T  20968752 taacaaaagataggggggaaaggtgcaattaagcctt 20968716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 9026950 - 9027086
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcac 107  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | | ||||||||||||         | || ||| ||||| ||||    
T  9026950 ccccttttcctctcttttaatgatgatttttaacaaaacacaattggcaaaagatggggtgcaaaatcactcaaaaaaaacaaggggtgtaaaattgcac 9027049  T
Q  108 aattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  9027050 aattagcaaaagatagggggaaaagtgaaattaagcc 9027086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 17372429 - 17372298
Alignment:
Q  14 ttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcacaattaa 113  Q
    |||| ||||||||||||||||||||||||||| ||| |||||||||||| | | |||||||| |||         |||| |||||||||||||||||||     
T  17372429 ttcccctcttttaatgatgattttgaacaaaatacaattggcaaaagatggggtgcaaaatcgctcaaaaaaaacagggggtgcaaaatcgcacaattag 17372330  T
Q  114 caaaagatagggggaaaa-gtgcaattaagcc 144  Q
    ||||| |||||||||||| |||||||||||||    
T  17372329 caaaaaatagggggaaaaggtgcaattaagcc 17372298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 26540790 - 26540915
Alignment:
Q  13 tttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgcacaatt 111  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| | | |||||||| |||          ||| |||| ||||||||||||||    
T  26540790 tttcccctcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgctcaaaaaaaaaaaggaagtgtaaaatcgcacaatt 26540889  T
Q  112 aacaaaagatagggggaaaagtgcaa 137  Q
    | ||||||||||||||||| ||||||    
T  26540890 agcaaaagatagggggaaaggtgcaa 26540915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 47871125 - 47871177
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47871125 gtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcctt 47871177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 18875111 - 18875245
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnn-gagggagtgcaaaatcgcacaat 110  Q
    ||||| ||| ||||||||||||||||||| |||||||| ||| |||||||| | | |||||||| |||         ||||| ||||||||||| |||||    
T  18875111 ttttcttctattttaatgatgattttgaataaaacacaattgccaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgtacaat 18875210  T
Q  111 taacaaaagataggggg-aaaagtgcaattaagcc 144  Q
    || |||||||||||||| |||||||||||||||||    
T  18875211 tagcaaaagatagggggcaaaagtgcaattaagcc 18875245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 42627463 - 42627599
Alignment:
Q  9 cccttttcctctcttttaatgatgattttgaacaaaaca-cagttggcaaaagatagagcgcaaaatcactcnnnnnnnn-gagggagtgcaaaatcgca 106  Q
    ||||||||| ||||||||||||||||||||||||||| | || ||||||||| || | | |||||||| |||         |||||| ||||||||| ||    
T  42627463 cccttttcccctcttttaatgatgattttgaacaaaaaaacaattggcaaaaaatggggtgcaaaatcgctcataaaaaaagaggga-tgcaaaatcaca 42627561  T
Q  107 caattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  42627562 caattagcaaaagatagagggaaaagtgcaattaagcc 42627599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 45060728 - 45060596
Alignment:
Q  13 tttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcacaatta 112  Q
    ||||| || |||||||||||||||||||||||||||| ||| ||||| |||| | |||||||| |||         |  |||| |||||||||| |||||    
T  45060728 tttcccctattttaatgatgattttgaacaaaacacaattgacaaaaaatagggtgcaaaatcgctcaaaaaaaaaaaagagtacaaaatcgcataatta 45060629  T
Q  113 acaaaagatag-ggggaaaagtgcaattaagcc 144  Q
     |||||||||| |||||||||||||||||||||    
T  45060628 gcaaaagatagtggggaaaagtgcaattaagcc 45060596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 13657579 - 13657517
Alignment:
Q  13 tttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatc 75  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| | | ||||||||    
T  13657579 tttcccctcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatc 13657517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 47870954 - 47870822
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaa-tcgcacaat 110  Q
    |||||| | |||||||||||||||| |||||||||||| |||||||||||| | | |||||||| |||         | || |||||||| ||||| |||    
T  47870954 ttttccccacttttaatgatgatttcgaacaaaacacaattggcaaaagatggggtgcaaaatcgctcaaaaaaa--aaggggtgcaaaattcgcataat 47870857  T
Q  111 taacaaaagatagggggaaaagtgcaattaagcct 145  Q
    || ||||||||||||| ||||||||||||||||||    
T  47870856 tagcaaaagataggggaaaaagtgcaattaagcct 47870822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 17441064 - 17441120
Alignment:
Q  92 gagtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaagcctta 147  Q
    |||||||||||||||||||||||||||||||| | |||||| |||||||||||||||    
T  17441064 gagtgcaaaatcgcacaattaacaaaagatagagaggaaaaatgcaattaagcctta 17441120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 8315085 - 8315136
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcct 145  Q
    |||||||||||||||||| |||||| |||||||| |||||||||||||||||    
T  8315085 gtgcaaaatcgcacaattgacaaaatataggggggaaagtgcaattaagcct 8315136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 3353178 - 3353128
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||||||||||||| |||||  |||||||||||||||||||||||||    
T  3353178 gtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 3353128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 3644666 - 3644616
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagat 62  Q
    |||||| |||||||||||||||||| |||||||||||| ||||||||||||    
T  3644666 ttttcccctcttttaatgatgatttcgaacaaaacacaattggcaaaagat 3644616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 42673299 - 42673349
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||||||||||||| |||||  |||||||||||||||||||||||||    
T  42673299 gtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 42673349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 18874933 - 18874881
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcct 145  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  18874933 gtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattgagcct 18874881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 45060878 - 45060926
Alignment:
Q  98 aaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  45060878 aaaatcgcacaattagcaaaagataggggtgaaaagtgcaattaagcct 45060926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 3644786 - 3644837
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagat-agggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||||||||| || |||||||||| ||||||||||||    
T  3644786 gtgcaaaatcgcacaattaacaaaaaataagggggaaaaatgcaattaagcc 3644837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 4947310 - 4947263
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaatta 140  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  4947310 gtgcaaaatcgcacaattaacaaaaaataggggtgaaaagtgcaatta 4947263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 8314064 - 8314013
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcc 144  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  8314064 gtgcaaaatcgcacaattgacaaaatataggggagaaaagtgcaattaagcc 8314013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 9026786 - 9026739
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 141  Q
    ||||||||| ||||||||||||||||||||| |||||| |||||||||    
T  9026786 gtgcaaaattgcacaattaacaaaagataggaggaaaaatgcaattaa 9026739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 14015967 - 14016014
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 141  Q
    ||||||||||||||||||| |||||||||||  |||||||||||||||    
T  14015967 gtgcaaaatcgcacaattagcaaaagataggatgaaaagtgcaattaa 14016014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 20969022 - 20969073
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  20969022 gtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 20969073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 1101087 - 1101141
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaac-aaaagatagggggaaaagtgcaattaa 141  Q
    ||||| |||||||||||||||||| || |||||||||||| ||||||||||||||    
T  1101087 gagggggtgcaaaatcgcacaattgacaaaaagataggggcaaaagtgcaattaa 1101141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 21896514 - 21896564
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||||||||||||| |||||| ||||||| |||| ||||||||||||    
T  21896514 gtgcaaaatcgcacaattgacaaaatataggggaaaaaatgcaattaagcc 21896564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 42673028 - 42672978
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||  ||||  |||||||||||||||||||||||||    
T  42673028 gtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 42672978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 53687939 - 53687885
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcctta 147  Q
    |||||||||||||||||| |||||  |||||||| ||||||||||||||||||||    
T  53687939 gtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctta 53687885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 10293665 - 10293608
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcc 144  Q
    ||||| |||||||||||||||||| ||||||||||||||  |||| ||||||||||||    
T  10293665 gagggggtgcaaaatcgcacaattgacaaaagataggggaaaaaaatgcaattaagcc 10293608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 141
Target Start/End: Complemental strand, 26540747 - 26540694
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 141  Q
    ||||| ||||||||| |||||||| |||||| ||||||| ||||||||||||||    
T  26540747 gagggggtgcaaaattgcacaattgacaaaaaataggggcaaaagtgcaattaa 26540694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 28702331 - 28702278
Alignment:
Q  91 ggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||||||||||| |||| ||||||||||| || ||||||| |||||||||    
T  28702331 ggagtgcaaaatcgcataattgacaaaagatagaggaaaaagtgaaattaagcc 28702278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 36180996 - 36181045
Alignment:
Q  97 caaaatcgcacaattaacaaaagataggg-ggaaaagtgcaattaagcct 145  Q
    |||||||||||||||||||||  |||||| ||||||||||||||||||||    
T  36180996 caaaatcgcacaattaacaaactatagggaggaaaagtgcaattaagcct 36181045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 40848567 - 40848518
Alignment:
Q  98 aaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctta 147  Q
    ||||||||||||||  ||||  ||||||||||||||||||||||||||||    
T  40848567 aaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcctta 40848518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 26007232 - 26007180
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    |||||||||||||||||| |||||  |||||||| ||| ||||||||||||||    
T  26007232 gtgcaaaatcgcacaattgacaaactataggggggaaaatgcaattaagcctt 26007180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 10771550 - 10771503
Alignment:
Q  98 aaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcct 145  Q
    |||||||||||||| |||||||||||||  |||| |||||||||||||    
T  10771550 aaaatcgcacaattgacaaaagatagggaaaaaaatgcaattaagcct 10771503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 14015827 - 14015761
Alignment:
Q  13 tttcctctcttttaatgatgattttgaac-aaaacacagttggcaaaagatagagcgcaaaatcactc 79  Q
    ||||| ||||||||||||||||||||||| |||||||| || ||||||||| | | ||||||||||||    
T  14015827 tttcccctcttttaatgatgattttgaacaaaaacacaatttgcaaaagat-gggtgcaaaatcactc 14015761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 1101045 - 1100995
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagat 62  Q
    |||||| ||||||||||||| ||||||||||||| ||| ||| ||||||||    
T  1101045 ttttcccctcttttaatgataattttgaacaaaatacaattgacaaaagat 1100995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 24485463 - 24485513
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||  ||||  |||||| ||||||||||||||||||    
T  24485463 gtgcaaaatcgcacaattggcaaactatagggagaaaagtgcaattaagcc 24485513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 42455839 - 42455789
Alignment:
Q  96 gcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcct 145  Q
    |||||||||||||||| |||||  |||||||| ||||||||||||||||||    
T  42455839 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 42455789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 9026909 - 9026860
Alignment:
Q  92 gagtgcaaaatcgcacaattaac-aaaagataggggg-aaaagtgcaatt 139  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||||||||    
T  9026909 gagtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 9026860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 14015867 - 14015923
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaac-aaaagataggggg--aaaagtgcaattaa 141  Q
    ||||||||||||||||||||||||  | |||||||||||||  ||||||||||||||    
T  14015867 gagggagtgcaaaatcgcacaattggcaaaaagataggggggcaaaagtgcaattaa 14015923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 17372597 - 17372645
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagc 143  Q
    |||||||||||||||||||  |||| ||| ||||||||||||||||||||    
T  17372597 gtgcaaaatcgcacaattagtaaaatata-ggggaaaagtgcaattaagc 17372645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 53688303 - 53688356
Alignment:
Q  91 ggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||||||||||||||||  ||||  |||||||  ||||||||||||||||    
T  53688303 ggagtgcaaaatcgcacaattggcaaactataggggagaaagtgcaattaagcc 53688356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 1101188 - 1101236
Alignment:
Q  98 aaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcct 145  Q
    ||||||||||||  | ||||||||| |||||||||||||||||||||||    
T  1101188 aaaatcgcacaaaaagcaaaagataagggggaaaagtgcaattaagcct 1101236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 4947494 - 4947530
Alignment:
Q  27 atgatgattttgaacaaaacacagttggcaaaagata 63  Q
    |||| |||||||||||||||||| |||||||||||||    
T  4947494 atgacgattttgaacaaaacacaattggcaaaagata 4947530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 17440982 - 17441049
Alignment:
Q  10 ccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcact 78  Q
    |||||||| |||||||||||||||||||||||| |||||| ||| ||| | || | | |||||||||||    
T  17440982 ccttttcc-ctcttttaatgatgattttgaacataacacaattgacaacatatggggtgcaaaatcact 17441049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 22429599 - 22429647
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaag 142  Q
    |||||||||||||||||| |||||  ||||| || ||||||||||||||    
T  22429599 gtgcaaaatcgcacaattgacaaactataggagggaaagtgcaattaag 22429647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 23630038 - 23630086
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagg-gggaaaagtgcaattaa 141  Q
    ||||||||||||||||||| ||||| ||||| || ||||||||||||||    
T  23630038 gtgcaaaatcgcacaattaccaaaaaataggaggaaaaagtgcaattaa 23630086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 40848964 - 40849016
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||  |||| ||||||||||||||||||||||    
T  40848964 gtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaagcct 40849016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 47665962 - 47665910
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagat-agggggaaaagtgcaattaagcct 145  Q
    |||||||||||||||||| |||||  || ||||| ||||||||||||||||||    
T  47665962 gtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaagcct 47665910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 48159948 - 48159896
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||  |||||||| ||||||||||||||||||    
T  48159948 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 48159896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 11241526 - 11241389
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcac 107  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||        |||||  |||||||||||||    
T  11241526 ccccttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaagaggggatgcaaaatcgcac 11241427  T
Q  108 aattaacaaaagat-agggggaaaagtgcaattaagcc 144  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  11241426 aattaacaaaagataaggaggaaaagtgcaattaagcc 11241389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 3930316 - 3930179
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgca 106  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||         ||||| |||||||||||||    
T  3930316 ccccttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgca 3930217  T
Q  107 caattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
     |||||| |||||||||||| |||||||||||||||||    
T  3930216 taattaataaaagataggggaaaaagtgcaattaagcc 3930179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 13198826 - 13198962
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnn-gagggagtgcaaaatcgcacaat 110  Q
    |||||| ||||||||||||||| |||||||||||||| ||||||||||||||| | |||||||| |||         ||||| |||||||||||||||||    
T  13198826 ttttcccctcttttaatgatgactttgaacaaaacacggttggcaaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgcaaaatcgcacaat 13198925  T
Q  111 taacaaaagata-gggggaaaagtgcaattaagcctt 146  Q
    |||||||||||| ||||||||||||||||||||||||    
T  13198926 taacaaaagataggggggaaaagtgcaattaagcctt 13198962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 8488399 - 8488534
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcac 107  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||| |||||||| | | |||||||| |||        ||||| ||||||||||||||    
T  8488399 ccccttttcctctcttttaatgatgattttgaacaaaatacaattgacaaaagatggggtgcaaaatcgctcaaaaaaaagagggggtgcaaaatcgcac 8488498  T
Q  108 aattaacaaaagatagggggaaaagtgcaattaagc 143  Q
    |||||  |||||||| || |||||||||||||||||    
T  8488499 aattagaaaaagataaggcgaaaagtgcaattaagc 8488534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 35393697 - 35393831
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcacaatt 111  Q
    |||||| ||||||||||||||||||||| ||||||||| ||| |||||||| | | |||||||| |||        ||||| ||||||| ||||||||||    
T  35393697 ttttcccctcttttaatgatgattttgagcaaaacacaattgacaaaagatggggtgcaaaatcgctcataaaaaagagggggtgcaaattcgcacaatt 35393796  T
Q  112 aacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    | |||||||||||| ||||||||||||||||||||    
T  35393797 agcaaaagatagggtgaaaagtgcaattaagcctt 35393831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 16555649 - 16555514
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnn--gagggagtgcaaaatcgcacaa 109  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||| | | |||||||| |||          ||||| ||||||||||||||||    
T  16555649 ttttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatgg-gtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaa 16555551  T
Q  110 ttaacaaaagat-agggggaaaagtgcaattaagcct 145  Q
    |||||||||||| ||||||||||||||||||||||||    
T  16555550 ttaacaaaagataagggggaaaagtgcaattaagcct 16555514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 49178736 - 49178866
Alignment:
Q  13 tttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc--nnnnnnnngagggagtgcaaaatcgcacaat 110  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| | | |||||||| |||          ||||| |||||||||||||||||    
T  49178736 tttcccctcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgctccaaaaaaaaagagggggtgcaaaatcgcacaat 49178835  T
Q  111 taacaaaagatagggg-gaaaagtgcaatta 140  Q
    |  ||||||||||||| ||||||||||||||    
T  49178836 tggcaaaagataggggagaaaagtgcaatta 49178866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 22681797 - 22681934
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcac 107  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||  | |||||||  |||         |  | ||||||||| ||||    
T  22681797 ccccttttcccctcttttaatgatgattttgaacaaaacatagttgacaaaagatatggtgcaaaattgctcaaaaaaataaatg-gtgcaaaattgcac 22681895  T
Q  108 aattaacaaaagatagg-gggaaaagtgcaattaagcct 145  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  22681896 aattaacaaaagataggagggaaaagtgcaattaagcct 22681934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 3930477 - 3930534
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcct 145  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3930477 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcct 3930534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 27304850 - 27304718
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgcacaat 110  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| || |   |||||||| |||         ||||| |||||||||||||||||    
T  27304850 ttttcctctcttttaatgatgattttgaacaaaacacaattggcaaaatatgggttgcaaaatcgctcaaaagaaaagagggggtgcaaaatcgcacaat 27304751  T
Q  111 taacaaaagatagggggaaaagtgcaattaagcc 144  Q
    || || |||||| ||||||||| |||||||||||    
T  27304750 tagcagaagata-ggggaaaagggcaattaagcc 27304718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 39415362 - 39415244
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgca 106  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||| |||||||| | | |||||||| |||         ||| | |||||||||||||    
T  39415362 ccccttttcccctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctcaaataaaaagagagggtgcaaaatcgca 39415263  T
Q  107 caattaacaaaagataggg 125  Q
    |||||| ||||||||||||    
T  39415262 caattagcaaaagataggg 39415244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 22681631 - 22681576
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagc 143  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  22681631 gagggggtgcaaaatcgcacaattgacaaaagataggggggaaagtgcaattaagc 22681576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 24775786 - 24775839
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagg-gggaaaagtgcaattaagcctt 146  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  24775786 gtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcctt 24775839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 18077199 - 18077259
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcctta 147  Q
    ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  18077199 gagggggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaagcctta 18077259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 3844411 - 3844466
Alignment:
Q  20 tcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatc 75  Q
    |||||||||||||||||||||||||||||| |||||||||||| | | ||||||||    
T  3844411 tcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatc 3844466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 5206093 - 5206030
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatc 75  Q
    |||||||||||||||||||||||||||||||||| | | |||||||||||| | | ||||||||    
T  5206093 ttttcctctcttttaatgatgattttgaacaaaataaaattggcaaaagatggggtgcaaaatc 5206030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 16555820 - 16555871
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagat-agggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  16555820 gtgcaaaatcgcacaattagcaaaagataagggggaaaagtgcaattaagcc 16555871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 7603419 - 7603472
Alignment:
Q  91 ggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||||||||||||||||   |||||||||||| |||||||||||||||||    
T  7603419 ggagtgcaaaatcgcacaattgtaaaaagataggggaaaaagtgcaattaagcc 7603472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 5206039 - 5205987
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggg-ggaaaagtgcaattaagcct 145  Q
    ||||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  5206039 gtgcaaaatcgccaaattaacaaaagatagggaggaaaagtgcaattaagcct 5205987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 147
Target Start/End: Original strand, 8182092 - 8182230
Alignment:
Q  14 ttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngag---ggagtgcaaaatcgcacaat 110  Q
    |||| ||||||||||||||||||||||||||||||| |||| ||||||| |   |||||||| |||         ||   || |||||||||||||||||    
T  8182092 ttcccctcttttaatgatgattttgaacaaaacacaattggtaaaagatgggatgcaaaatcgctcaacaaaaaaagaggggggtgcaaaatcgcacaat 8182191  T
Q  111 taac-aaaagatagggg-gaaaagtgcaattaagcctta 147  Q
    || | |||| ||||||| |||||||||||||||||||||    
T  8182192 tagcaaaaaaataggggtgaaaagtgcaattaagcctta 8182230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 50678830 - 50678778
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  50678830 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 50678778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 56505744 - 56505692
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  56505744 gtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 56505692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 5206233 - 5206283
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcc 144  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  5206233 gtgcaaaatcgcacaattaa-aaaagataagggggaaaagtgcaattaagcc 5206283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 7603200 - 7603146
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagc 143  Q
    ||||| ||||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  7603200 gagggggtgcaaaattgcacaattaaaaaaagata-ggggaaaagtgcaattaagc 7603146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 11241664 - 11241715
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcct 145  Q
    |||||||||| |||||||  |||||||||||||||||||| |||||||||||    
T  11241664 gtgcaaaatcccacaattggcaaaagatagggggaaaagtacaattaagcct 11241715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 293220 - 293273
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcctt 146  Q
    |||||||||||||||||| |||||  |||||||| |||||||||||||||||||    
T  293220 gtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcctt 293273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 5206132 - 5206185
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaac-aaaagatagggggaa-aagtgcaatt 139  Q
    ||||||||||||||||||||||||| | ||||||||||||||| ||||||||||    
T  5206132 gagggagtgcaaaatcgcacaattagcaaaaagatagggggaagaagtgcaatt 5206185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 9023683 - 9023736
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcctt 146  Q
    |||||||||||||||||| |||||  ||||||| ||||||||||||||||||||    
T  9023683 gtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 9023736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 26207411 - 26207358
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctta 147  Q
    ||||||||||||||||||  ||||  |||||||| |||||||||||||||||||    
T  26207411 gtgcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagcctta 26207358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 36095868 - 36095815
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||  ||||||||||||| ||||| ||||||||||||||    
T  36095868 gtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcctt 36095815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 7603247 - 7603199
Alignment:
Q  13 tttcctctcttttaatgatgattttgaacaaaacacagttggcaaaaga 61  Q
    ||||| || |||||||||||||||||||||||||||| ||| |||||||    
T  7603247 tttcccctattttaatgatgattttgaacaaaacacaattgacaaaaga 7603199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 36096478 - 36096526
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaa 141  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  36096478 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 36096526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 39744468 - 39744520
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||||||||||    
T  39744468 gtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 39744520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 45830203 - 45830251
Alignment:
Q  98 aaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    |||||||||||||| |||||||||||||| ||||||||| |||||||||    
T  45830203 aaaatcgcacaattgacaaaagataggggtgaaaagtgcgattaagcct 45830251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 9380741 - 9380796
Alignment:
Q  91 ggagtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    |||||||||||||||||||||  ||||  ||||||| |||||||||||||||||||    
T  9380741 ggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 9380796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 23540255 - 23540306
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcc 144  Q
    |||||||||||||||||| |||||  ||||||| ||||||||||||||||||    
T  23540255 gtgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaattaagcc 23540306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 50679427 - 50679478
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcc 144  Q
    ||||||||||| ||||||  ||||||||||||| ||||||||||||||||||    
T  50679427 gtgcaaaatcgtacaattggcaaaagataggggtgaaaagtgcaattaagcc 50679478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 39912101 - 39912051
Alignment:
Q  98 aaaatcgcacaattaacaaaagataggg-ggaaaagtgcaattaagcctta 147  Q
    |||||||||||||||| |||  |||||| ||||||||||||||||||||||    
T  39912101 aaaatcgcacaattaataaactatagggaggaaaagtgcaattaagcctta 39912051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 43051255 - 43051309
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcctta 147  Q
    |||||||||| |||||||  ||||||||||||| ||||| |||||||||||||||    
T  43051255 gtgcaaaatcacacaattggcaaaagataggggtgaaaaatgcaattaagcctta 43051309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 8182049 - 8181992
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaa-gataggggg-aaaagtgcaattaagc 143  Q
    ||||| ||||||||||||||||||  ||||| ||||||||| ||||||||||||||||    
T  8182049 gagggggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaattaagc 8181992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 8488239 - 8488186
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||||||||||||| ||   |||| ||||||||||||||    
T  8488239 gtgcaaaatcgcacaattaacaaaagatatggaaaaaaaatgcaattaagcctt 8488186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 27304890 - 27304943
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaac-aaaagataggggg-aaaagtgcaatt 139  Q
    ||||| ||||||||||||||||||| | ||||||||||||| ||||||||||||    
T  27304890 gagggggtgcaaaatcgcacaattagcaaaaagatagggggaaaaagtgcaatt 27304943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 28196776 - 28196829
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||  ||||  ||||||| ||||||||||||||||||||    
T  28196776 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctt 28196829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 48406012 - 48405959
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctta 147  Q
    ||||||||| ||| ||||  ||||  ||||||||||||||||||||||||||||    
T  48406012 gtgcaaaattgcataattggcaaactatagggggaaaagtgcaattaagcctta 48405959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 131
Target Start/End: Original strand, 54509118 - 54509155
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaa 131  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  54509118 gtgcaaaatcgcacaattagcaaaaaatagggggaaaa 54509155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 9023295 - 9023243
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||  ||||||| |||||||||||||||||||    
T  9023295 gtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaagcct 9023243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 28196397 - 28196345
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||  |||||||| ||||||||||||||||||    
T  28196397 gtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaagcct 28196345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 47219204 - 47219252
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaa 141  Q
    ||||||||||||||||||| |||||||||| || ||||| |||||||||    
T  47219204 gtgcaaaatcgcacaattagcaaaagatagaggtgaaaaatgcaattaa 47219252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 6171293 - 6171156
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngaggga-gtgcaaaatcgca 106  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||         |   | |||||||||||||    
T  6171293 ccccttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcactcaaaaaaaaaaaaaaggtgcaaaatcgca 6171194  T
Q  107 caattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6171193 caattaacaaaagatagggggaaaagtgcaattaagcc 6171156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 11883842 - 11883980
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgca 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||||| |||         ||||| |||||||||||||    
T  11883842 ccccttttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatggagtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgca 11883941  T
Q  107 caattaacaaaagata-gggggaaaagtgcaattaagcc 144  Q
    |||||| ||||||||| ||||||||||||||||||||||    
T  11883942 caattagcaaaagataggggggaaaagtgcaattaagcc 11883980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 30191145 - 30191279
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgcacaat 110  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||         ||||| |||||||||||||||||    
T  30191145 ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaat 30191244  T
Q  111 taacaaaagata-gggggaaaagtgcaattaagcc 144  Q
    ||| |||||||| ||||||||||||||||||||||    
T  30191245 taataaaagataggggggaaaagtgcaattaagcc 30191279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 20347300 - 20347162
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgca 106  Q
    |||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||| | |||||||| |||         ||||| |||||||||||||    
T  20347300 ccccatttcccctcttttaacgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagaggg-gtgcaaaatcgca 20347202  T
Q  107 caattaacaaaagatag-ggggaaaagtgcaattaagcct 145  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  20347201 caattaacaaaagatagaggggaaaagtgtaattaagcct 20347162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 32672980 - 32672842
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgca 106  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||         ||| | |||||||||||||    
T  32672980 ccccttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagagggtgcaaaatcgca 32672881  T
Q  107 caattaacaaaagat-agggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||| |||   |||||||||||||||||    
T  32672880 caattaacaaaagataaggaacaaaagtgcaattaagcc 32672842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 40469565 - 40469427
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgca 106  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||| | |||||||| |||         ||||| |||||||||||||    
T  40469565 ccccttttcctctattttaatgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgca 40469466  T
Q  107 caattaacaaaagatagg-gggaaaagtgcaattaagcc 144  Q
    |||||| ||||||||||| ||||||| | ||||||||||    
T  40469465 caattagcaaaagataggagggaaaaatacaattaagcc 40469427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 26737607 - 26737480
Alignment:
Q  18 tctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcacaattaacaaa 117  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| | | ||||||||  |         ||||| ||||||||||||||||||| ||||    
T  26737607 tctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgttaaaaaaaaagagggggtgcaaaatcgcacaattagcaaa 26737508  T
Q  118 agatagggggaaaagtgcaattaagcctt 146  Q
    ||||| || ||||||||||||||||||||    
T  26737507 agata-ggagaaaagtgcaattaagcctt 26737480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 17345955 - 17346089
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgcacaat 110  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| || |   |||||||| |||         ||||  |||||||||||||||||    
T  17345955 ttttcctctcttttaatgatgattttgaacaaaacacaattggcaaaatatgggatgcaaaatcgctcaaaaataaagaggaggtgcaaaatcgcacaat 17346054  T
Q  111 taacaaaagatagggggaaaagtgcaattaagcct 145  Q
    || |||||||||  || ||||||||||||||||||    
T  17346055 tagcaaaagataaaggaaaaagtgcaattaagcct 17346089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 141
Target Start/End: Complemental strand, 15920890 - 15920781
Alignment:
Q  33 attttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcacaattaacaaaagatagg-gggaaaa 131  Q
    ||||||||||||||||| |||||||||||| | | |||||||  |||        ||||| ||||||||||||||||||||||||||||||| |||||||    
T  15920890 attttgaacaaaacacaattggcaaaagatggggtgcaaaattgctcaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggagggaaaa 15920791  T
Q  132 gtgcaattaa 141  Q
    ||| ||||||    
T  15920790 gtgaaattaa 15920781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 11883680 - 11883621
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaagcctt 146  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  11883680 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcctt 11883621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 24832382 - 24832328
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaagcctta 147  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  24832382 gtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcctta 24832328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 6495724 - 6495777
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggg-ggaaaagtgcaattaagcctt 146  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  6495724 gtgcaaaatcgcacaattcacaaaagatagggaggaaaagtgcaattaagcctt 6495777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 43495439 - 43495307
Alignment:
Q  14 ttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcacaattaa 113  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||| ||   | |||||||| ||         |||||  || |||||||||||||||     
T  43495439 ttcccctcttttaatgatgattttgaacaaaacacaattggcaaaatatgaggtgcaaaatcgct-aaaaaaaagaggggatgaaaaatcgcacaattag 43495341  T
Q  114 caaaagatagg-gggaaaagtgcaattaagcctt 146  Q
    ||||| ||||| ||||||||||||||||||||||    
T  43495340 caaaatataggtgggaaaagtgcaattaagcctt 43495307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 20347461 - 20347520
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcctt 146  Q
    ||||| ||||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  20347461 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctt 20347520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 40469726 - 40469785
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcctt 146  Q
    ||||| ||||||||||||||||||| |||||||||||||| |||||||||||||| ||||    
T  40469726 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaaacctt 40469785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 18055103 - 18055050
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaag 142  Q
    ||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  18055103 gagggggtgcaaaatcgcacaattagcaaaag-tagggggaaaagtgcaattaag 18055050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 30190980 - 30190922
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaagcct 145  Q
    ||||| ||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  30190980 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 30190922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 40221363 - 40221313
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  40221363 gtgcaaaatcgaacaattagcaaaagatagggggaaaggtgcaattaagcc 40221313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 43495481 - 43495535
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaa-gatagggggaaaagtgcaattaa 141  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||||||||||||    
T  43495481 gagggggtgcaaaatcgcacaattgacaaaaagatagggggaaaagtgcaattaa 43495535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 18296696 - 18296749
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  18296696 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctt 18296749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 32673141 - 32673198
Alignment:
Q  89 agggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    |||| ||||||||||||||||||  ||||||||||||| |||||||||||||| ||||    
T  32673141 agggggtgcaaaatcgcacaattggcaaaagataggggaaaaagtgcaattaaacctt 32673198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 2639485 - 2639537
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  2639485 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 2639537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 26841638 - 26841586
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  26841638 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 26841586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 15321440 - 15321394
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaag 142  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  15321440 tgcaaaattgcacaattaacaaaagata-ggggaaaagtgcaattaag 15321394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 26737784 - 26737835
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcc 144  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||||||||    
T  26737784 gtgcaaaatcgcacagttagcaaaagataggggtgaaaagtgcaattaagcc 26737835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 6171459 - 6171513
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcctta 147  Q
    |||||||||| |||||||  ||||||||||||| |||||||||||||||||||||    
T  6171459 gtgcaaaatcccacaattggcaaaagataggggggaaaagtgcaattaagcctta 6171513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 6495517 - 6495468
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggg-ggaaaagtgcaattaagc 143  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  6495517 gtgcaaaatcgcacaattaac-aaagatagggaggaaaagtgcaattaagc 6495468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 15321610 - 15321672
Alignment:
Q  13 tttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatc 75  Q
    ||||| ||||||||||||||||||||||||||||||| |||  ||||||| | | ||||||||    
T  15321610 tttcccctcttttaatgatgattttgaacaaaacacaattgataaaagatggggtgcaaaatc 15321672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 40221449 - 40221395
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagat 62  Q
    ||||||| || ||||||||||||||||||||||| ||||||| ||| ||||||||    
T  40221449 cccctttccccctcttttaatgatgattttgaacgaaacacaattgacaaaagat 40221395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 2638871 - 2638818
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||  ||||||||||||| ||||| ||||||||||||||    
T  2638871 gtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcctt 2638818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 8851585 - 8851638
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcctt 146  Q
    |||||||||||||||||| |||||  ||||||| ||||||||||||||||||||    
T  8851585 gtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 8851638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 18750129 - 18750178
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagc 143  Q
    |||||||||||||||||| |||||  ||||||||| ||||||||||||||    
T  18750129 gtgcaaaatcgcacaattgacaaactatagggggagaagtgcaattaagc 18750178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 43495609 - 43495658
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||||||||||||| ||||| ||||| || ||||||||||||||||    
T  43495609 tgcaaaatcgcacaattagcaaaatataggtgggaaagtgcaattaagcc 43495658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 7980006 - 7980058
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||| ||||  |||| || |||||||||||||||||||    
T  7980006 gtgcaaaatcgcacaattagcaaactatagaggaaaaagtgcaattaagcctt 7980058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 29230333 - 29230281
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaagcct 145  Q
    |||||||||| ||||||| ||||||||||| | ||||||||||||||||||||    
T  29230333 gtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaagcct 29230281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 7664676 - 7664727
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggg-ggaaaagtgcaattaagcc 144  Q
    |||||||||||||||||| |||||  |||||| |||||||||||||||||||    
T  7664676 gtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagcc 7664727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 18055265 - 18055328
Alignment:
Q  13 tttcctctcttttaatgatgattttgaaca-aaacacagttggcaaaagatagagcgcaaaatc 75  Q
    ||||| |||||||||||||||||||||| | ||||||| |||||||||||| | | ||||||||    
T  18055265 tttcccctcttttaatgatgattttgaagacaaacacaattggcaaaagatggggtgcaaaatc 18055328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 26842241 - 26842292
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||  ||||||||||||| |||||||||| |||||||    
T  26842241 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcacttaagcc 26842292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 41790541 - 41790494
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 141  Q
    |||||||||||||||||| |||||  |||||||||||| |||||||||    
T  41790541 gtgcaaaatcgcacaattgacaaactatagggggaaaaatgcaattaa 41790494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 18296127 - 18296077
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagc 143  Q
    ||||||||||||||||||  ||||||||||||| ||||||| |||||||||    
T  18296127 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaagc 18296077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 37720255 - 37720201
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcctta 147  Q
    ||||||||||||||||||  ||||  |||||||| ||||||||||||||||||||    
T  37720255 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctta 37720201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 41790917 - 41790967
Alignment:
Q  96 gcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    ||||||||||||||||  ||||| ||||||| |||||||||||||||||||    
T  41790917 gcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaagcct 41790967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 141
Target Start/End: Complemental strand, 17345788 - 17345736
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 141  Q
    ||||| ||||||||| ||| ||||| ||||||||| ||||||||||||||||||    
T  17345788 gagggggtgcaaaattgcataattagcaaaagata-ggggaaaagtgcaattaa 17345736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 5378712 - 5378660
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||  |||||||| ||||||||||||||||||    
T  5378712 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 5378660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 7591252 - 7591204
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaa 141  Q
    ||||||||||||||||||  ||||||||||||| ||||||| |||||||    
T  7591252 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaa 7591204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 7664299 - 7664247
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcct 145  Q
    |||||||||||||||||| | |||  |||||||| ||||||||||||||||||    
T  7664299 gtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagcct 7664247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 18055319 - 18055367
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaa 141  Q
    |||||||||||||||||| ||||||| ||| ||| ||||||||||||||    
T  18055319 gtgcaaaatcgcacaattgacaaaaggtagagggaaaaagtgcaattaa 18055367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 29343632 - 29343584
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaa 141  Q
    |||||||||| ||||||| ||||||||||| | ||||||||||||||||    
T  29343632 gtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaa 29343584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 6e-36; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 34313900 - 34313765
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcac 107  Q
    |||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| | |||||||| |||        ||||| ||||||||||||||    
T  34313900 ccccttttcccctcttttaatgataattttgaacaaaacacagtttgcaaaagatagggtgcaaaatcgctcaaaaaaaagagggggtgcaaaatcgcac 34313801  T
Q  108 aattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34313800 aattaacaaaagata-ggggaaaagtgcaattaagcc 34313765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 15156021 - 15155882
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgca 106  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | |||||||| |||         ||||| |||||||||||||    
T  15156021 ccccttttcccctcttttagtgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgca 15155922  T
Q  107 caattaacaaaagata-gggggaaaagtgcaattaagcct 145  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  15155921 caattaacaaaagataggggggaaaagtgcaattaagcct 15155882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 37752333 - 37752470
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcac 107  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||| || | | |||||||| |||        ||||| ||||||||||||||    
T  37752333 ccccttttcctctcttttaatgatgattttgaacaaaacacaattgacaaaatatggggtgcaaaatcgctcaaaaaaaagagggggtgcaaaatcgcac 37752432  T
Q  108 aattaacaaaagata-gggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  37752433 aattaacaaaagataggggggaaaagtgcaattaagcc 37752470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 12281346 - 12281480
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnn-gagggagtgcaaaatcgcacaat 110  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||| | | |||||| |||         ||||| |||||||||||||||||    
T  12281346 ttttcccctcttttaatgatgattttgaacaaaacacagttgacaaaagatagggtggaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaat 12281445  T
Q  111 taacaaaagat-agggggaaaagtgcaattaagcc 144  Q
    ||||||||||| |||||||||||||||||||||||    
T  12281446 taacaaaagataagggggaaaagtgcaattaagcc 12281480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 16929163 - 16929296
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcacaatt 111  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||| | | ||||||||  ||        ||||| ||||||||||||||||||    
T  16929163 ttttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgttcaaaaaaaagagggggtgcaaaatcgcacaatt 16929262  T
Q  112 aacaaaagatagggg-gaaaagtgcaattaagcc 144  Q
    | ||||||||||||| ||||||||||||||||||    
T  16929263 agcaaaagataggggagaaaagtgcaattaagcc 16929296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 43162373 - 43162234
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc---nnnnnnnngagggagtgcaaaatcg 104  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||| | |||||||| |||           ||||  |||||||||||    
T  43162373 ccccttttcccctcttttaatgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcaaaaaaaaaaagaggaggtgcaaaatcg 43162274  T
Q  105 cacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  43162273 cacaattaacaaaatatagggggaaaagtgcaattaagcc 43162234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 18020005 - 18020143
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcac 107  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||| |||||||| | | |||||||| |||        ||||| ||||||||||||||    
T  18020005 ccccttttcccttcttttaatgacgattttgaacaaaacgcagttgccaaaagatggggtgcaaaatcgctcaaaaaaaagagggggtgcaaaatcgcac 18020104  T
Q  108 aattaacaaaagatagggggaaaagtgcaattaagcctta 147  Q
    ||||||||||||||| ||| ||||||||||||||||||||    
T  18020105 aattaacaaaagata-gggtaaaagtgcaattaagcctta 18020143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 43246091 - 43246232
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc--nnnnnnnngagggagtgcaaaatcgc 105  Q
    ||||||||||| | |||||||||||||||||||||||||||| ||| |||||||| | | |||||||| |||          ||||| |||||||||| |    
T  43246091 ccccttttccttttttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcac 43246190  T
Q  106 acaattaacaaaagata-gggggaaaagtgcaattaagcctt 146  Q
    ||||||| ||||||||| ||||||||||||||||||||||||    
T  43246191 acaattagcaaaagataggggggaaaagtgcaattaagcctt 43246232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 765950 - 766018
Alignment:
Q  7 tccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatc 75  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  765950 tcccattttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatc 766018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 9465790 - 9465908
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgca 106  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||| || | | |||||||  |||         ||||| |||||||||||||    
T  9465790 ccccttttcccctcttttaatgatgattttgaacaaaacacaattggcaaaaaatggggtgcaaaattgctcaaaaaaaaagagggggtgcaaaatcgca 9465889  T
Q  107 caattaacaaaagataggg 125  Q
    |||||||||||||||||||    
T  9465890 caattaacaaaagataggg 9465908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 33748117 - 33747983
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgcacaat 110  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||| | |||||||| |||         ||| |  ||||||||| ||||||    
T  33748117 ttttcctctcttttagtgatgattttgaacaaaacacaattggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagcggatgcaaaatcacacaat 33748018  T
Q  111 taacaaaagatagggggaaaagtgcaattaagcct 145  Q
    || ||||||||| ||  ||||||||||||||||||    
T  33748017 tagcaaaagatatggaaaaaagtgcaattaagcct 33747983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 37670091 - 37669958
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcac 107  Q
    |||| ||| |||||||||||| |||||||||||||||||||| |||||||||||| | | |||||||| ||         |||| || ||||||| ||||    
T  37670091 ccccattttctctcttttaataatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgct-aaaaaaaagaggtagggcaaaattgcac 37669993  T
Q  108 aattaacaaaagat-agggggaaaagtgcaattaa 141  Q
    |||||||||||||| ||| ||||||||||||||||    
T  37669992 aattaacaaaagataaggaggaaaagtgcaattaa 37669958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 41662239 - 41662104
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnn-gagggagtgcaaaatcgca 106  Q
    |||||||||| |||||||||||||||      ||||||||||||||||||||||||  | |||||||| ||          ||||| |||||||||||||    
T  41662239 ccccttttcccctcttttaatgatga------acaaaacacagttggcaaaagatatggtgcaaaatcgcttaaaaaaaaagagggggtgcaaaatcgca 41662146  T
Q  107 caattaacaaaagatagggggaaaa-gtgcaattaagcctta 147  Q
    |||||||||||||||| |||||||| ||||||||||||||||    
T  41662145 caattaacaaaagatatggggaaaatgtgcaattaagcctta 41662104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 142
Target Start/End: Complemental strand, 74816 - 74688
Alignment:
Q  13 tttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcacaatta 112  Q
    ||||| ||||||||||||||||||||||||||||||| || |||||||||   | |||||||| ||          |||| |||||||||||||||||||    
T  74816 tttcccctcttttaatgatgattttgaacaaaacacaattagcaaaagatgaggtgcaaaatcgctaaaaaaaaaaaggg-gtgcaaaatcgcacaatta 74718  T
Q  113 acaaaagatagggggaaaagtgcaattaag 142  Q
     |||||||| | ||||||||||||||||||    
T  74717 gcaaaagatggagggaaaagtgcaattaag 74688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 23123478 - 23123338
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaac-aaaacacagttggcaaaagatagagcgcaaaatcact---cnnnnnnnngagggagtgcaaaatc 103  Q
    |||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| | | |||||||||||            || || ||| ||||||    
T  23123478 ccccttttcccctcttttaatgatgattttgaacaaaaacacaattggcaaaagat-gggtgcaaaatcactaaaaaaaaaaaagatggggtgtaaaatc 23123380  T
Q  104 gcacaattaacaaaagatagg-gggaaaagtgcaattaagcc 144  Q
    |||||||| |||||||||||| ||||||||||||||||||||    
T  23123379 gcacaattgacaaaagataggagggaaaagtgcaattaagcc 23123338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 7127783 - 7127660
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcacaatt 111  Q
    |||||| ||||||||||||||||||| ||||||||||| ||| ||||||||   | |||||||| ||         | |||| |||||||||||||||||    
T  7127783 ttttcccctcttttaatgatgatttttaacaaaacacaattgacaaaagatgaggtgcaaaatcgctaagaaaaaag-ggga-tgcaaaatcgcacaatt 7127686  T
Q  112 aacaaaagatagggggaaaagtgcaa 137  Q
    | ||||||||||||||||||||||||    
T  7127685 agcaaaagatagggggaaaagtgcaa 7127660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 15156182 - 15156239
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcc 144  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  15156182 gagggggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaagcc 15156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 43245928 - 43245871
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcc 144  Q
    ||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  43245928 gagggggtgcaaaatcgcacaattatcaaaagatagggggaaaaagtgcaattaagcc 43245871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 767720 - 767760
Alignment:
Q  105 cacaattaacaaaagatagggggaaaagtgcaattaagcct 145  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  767720 cacaattaacaaaagatagggggaaaagtgcaattaagcct 767760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 9930837 - 9930885
Alignment:
Q  89 agggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaa 137  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  9930837 agggagtgcaaaatcgcacaattaacaaaagataagggggaaagtgcaa 9930885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 13936773 - 13936721
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  13936773 gtgcaaaatcgcacaattggtaaaagatagggggaaaagtgcaattaagcctt 13936721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 43162536 - 43162588
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaatta 140  Q
    ||||| |||||||||||||| ||| ||||||||||||||||||||||||||||    
T  43162536 gagggggtgcaaaatcgcacgattgacaaaagatagggggaaaagtgcaatta 43162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 95 - 146
Target Start/End: Complemental strand, 6092825 - 6092775
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  6092825 tgcaaaatcgcacaattgacaaaagatagggggaaaa-tgcaattaagcctt 6092775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 22851441 - 22851390
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcc 144  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  22851441 gtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaagcc 22851390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 16928999 - 16928941
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaagcct 145  Q
    ||||| ||||||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  16928999 gagggggtgcaaaatcgcacaattagcaaaagatagggggggaaagtgcaattaagcct 16928941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 9823364 - 9823417
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  9823364 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctt 9823417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 12281175 - 12281122
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||||||||||    
T  12281175 gtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctt 12281122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 22787033 - 22787082
Alignment:
Q  13 tttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagat 62  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |||||||    
T  22787033 tttcccctcttttaatgatgattttgaacaaaacacaattggaaaaagat 22787082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 41662400 - 41662457
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcc 144  Q
    ||||| ||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  41662400 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 41662457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 9465653 - 9465605
Alignment:
Q  98 aaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||    
T  9465653 aaaattgcacaattgacaaaagataggaggaaaagtgcaattaagcctt 9465605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 13026686 - 13026634
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  13026686 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 13026634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 765791 - 765736
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaag 142  Q
    ||||| ||||||||||||||||||  |||||||||| |||||||||||||||||||    
T  765791 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 765736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 3463691 - 3463641
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcct 145  Q
    ||||||||| |||||||||||||||||||||||||||| || ||||||||||    
T  3463691 gtgcaaaattgcacaattaacaaaagatagggggaaaa-tgtaattaagcct 3463641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 9822799 - 9822748
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcc 144  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||||||||    
T  9822799 gtgcaaaatcgcacaattgataaaagataggggtgaaaagtgcaattaagcc 9822748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 37752135 - 37752084
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||    
T  37752135 gtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaagcc 37752084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 39724051 - 39724102
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  39724051 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 39724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 3307388 - 3307338
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcc 144  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||||||||    
T  3307388 tgcaaaatcgcacaattgacaaaagataggggtgaaaaatgcaattaagcc 3307338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 3463769 - 3463723
Alignment:
Q  16 cctctcttttaatgatgattttgaacaaaacacagttggcaaaagat 62  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||    
T  3463769 cctctcttttaatgatgattttaaacaaaactcaattggcaaaagat 3463723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 23123514 - 23123567
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaag 142  Q
    ||||| ||||||||||||||||||| ||||||||| |||| ||||||||||||||    
T  23123514 gagggggtgcaaaatcgcacaattagcaaaagataagggg-aaagtgcaattaag 23123567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 37670253 - 37670306
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaag 142  Q
    ||||| ||||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  37670253 gagggggtgcaaaattgcacaattaacaaa-gatagggagaaaagtgcaattaag 37670306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 25439129 - 25439182
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctta 147  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||||| |||||    
T  25439129 gtgcaaaatcgcacaattgacaaactataggggaaaaagtgcaattaaacctta 25439182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 13027284 - 13027332
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaa 141  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  13027284 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 13027332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 13937392 - 13937444
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    ||||||| |||||||||| |||||| ||||||| |||||||||||||||||||    
T  13937392 gtgcaaattcgcacaattgacaaaaaataggggggaaaagtgcaattaagcct 13937444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 3463948 - 3463999
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcc 144  Q
    |||||| |||||||||||| ||||| ||| ||||||||||||||||||||||    
T  3463948 gtgcaagatcgcacaattagcaaaatataggggggaaaagtgcaattaagcc 3463999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 7127925 - 7127979
Alignment:
Q  94 gtgcaaaatcgcacaa-ttaacaaaagatagggggaaaagtgcaattaagcctta 147  Q
    |||||||||||||||| ||| ||||||||||||  |||||||||||||| |||||    
T  7127925 gtgcaaaatcgcacaaattagcaaaagatagggaaaaaagtgcaattaaacctta 7127979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 11007613 - 11007563
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||| ||||||||||  |||||| || |||||||||    
T  11007613 gtgcaaaatcgcacaattagcaaaagatagcaggaaaaatgtaattaagcc 11007563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 11007750 - 11007796
Alignment:
Q  14 ttcctctcttttaatgatgattttgaac-aaaacacagttggcaaaa 59  Q
    |||| ||||||||||||||||||||||| |||||||| |||||||||    
T  11007750 ttcccctcttttaatgatgattttgaacaaaaacacaattggcaaaa 11007796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 17431334 - 17431285
Alignment:
Q  98 aaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcctt 146  Q
    |||||||||||||| |||||  ||| ||||||||||||||||||||||||    
T  17431334 aaaatcgcacaattgacaaactatatgggggaaaagtgcaattaagcctt 17431285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 41662572 - 41662519
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||  ||||  ||| ||||||||||||||||||||||||    
T  41662572 gtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaagcctt 41662519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 9930754 - 9930806
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaac-aaaacacagttggcaaaa 59  Q
    |||| ||||| ||||||||||||||||||||||| |||||||| ||| |||||    
T  9930754 ccccctttcccctcttttaatgatgattttgaacaaaaacacaattgacaaaa 9930806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 22786891 - 22786843
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaa 141  Q
    |||||||||| ||||||||  ||||||||||||| ||||||||||||||    
T  22786891 gtgcaaaatcacacaattagtaaaagatagggggaaaaagtgcaattaa 22786843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 34498173 - 34498125
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaa 141  Q
    |||||||||||||||||| |||||  |||||||| ||||||||||||||    
T  34498173 gtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 34498125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 34498558 - 34498610
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||  ||||||| |||||||||||||||||||    
T  34498558 gtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaattaagcct 34498610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 43598758 - 43598790
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg 126  Q
    ||||||||||||||||||| |||||||||||||    
T  43598758 gtgcaaaatcgcacaattagcaaaagatagggg 43598790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 9e-35; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 12 - 141
Target Start/End: Complemental strand, 8108854 - 8108724
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcacaatt 111  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||         |||| ||||||||||||||||||    
T  8108854 ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaaagggggtgcaaaatcgcacaatt 8108755  T
Q  112 aacaaaagataggg-ggaaaagtgcaattaa 141  Q
    |||||||||||||| ||||||||||||||||    
T  8108754 aacaaaagatagggaggaaaagtgcaattaa 8108724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 17518436 - 17518302
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgcacaat 110  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||         ||||| |||||||||||||||||    
T  17518436 ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaat 17518337  T
Q  111 taacaaaagatagggggaaaagtgcaattaagcct 145  Q
    |||||||||||| ||||||| ||||||||||||||    
T  17518336 taacaaaagataaggggaaaggtgcaattaagcct 17518302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 41083126 - 41083265
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcact--cnnnnnnnngagggagtgcaaaatcgc 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || | | |||||||| ||           ||||| ||||||||||||    
T  41083126 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaatattgggtgcaaaatcgctaaaaaaaaaaagagggggtgcaaaatcgc 41083225  T
Q  106 acaattaacaaaagatagggggaaaagtgcaattaagcct 145  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  41083226 acaactaacaaaagatagggggaaaagtgcaattaagcct 41083265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 47955528 - 47955663
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgcacaat 110  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||         ||||| |||||||||||||||||    
T  47955528 ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaat 47955627  T
Q  111 taacaaaagata-gggggaaaagtgcaattaagcct 145  Q
    ||| |||||||| |||||||||||||||||||||||    
T  47955628 taataaaagataggggggaaaagtgcaattaagcct 47955663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 22149538 - 22149401
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcac 107  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| | | |||||||| |||        ||||| ||||||||||||||    
T  22149538 ccccttttcctctcttttaatgatgattttgaacaaagcacaattgacaaaagatggggtgcaaaatcgctcaaaaaaaagagggggtgcaaaatcgcac 22149439  T
Q  108 aattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    |||| || |||||||||||||||||||||||||||||||    
T  22149438 aatt-accaaagatagggggaaaagtgcaattaagcctt 22149401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 31848121 - 31848247
Alignment:
Q  19 ctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcacaattaacaaaa 118  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| | | |||||||| |||        ||||| ||||||||||| |||||||||||||    
T  31848121 ctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctcgaaaaaa-gagggggtgcaaaatcgtacaattaacaaaa 31848219  T
Q  119 gatagggg-gaaaagtgcaattaagcct 145  Q
    |||||||| |||||||||||||||||||    
T  31848220 gataggggagaaaagtgcaattaagcct 31848247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 13589656 - 13589714
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13589656 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcctt 13589714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 17518599 - 17518653
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaag 142  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||||||||||||    
T  17518599 gagggggtgcaaaatcgcacaattggcaaaagatagggggaaaagtgcaattaag 17518653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 20480218 - 20480165
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctta 147  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  20480218 gtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcctta 20480165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 46057110 - 46057243
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaac-aaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgca 106  Q
    |||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| || | | |||| | |||        |||||||| |||||| |||    
T  46057110 ccccctttcccctcttttaatgatgattttgaactaaaacacaattggcaaaagaaagggtgtaaaaccgctc-aaaaaaagagggagttcaaaattgca 46057208  T
Q  107 caattaacaaaagatagggggaaaagtgcaattaa 141  Q
     ||||| ||||||||||||| ||||||||||||||    
T  46057209 taattagcaaaagataggggaaaaagtgcaattaa 46057243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 47955363 - 47955303
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaagcctta 147  Q
    ||||| ||||||||||||||||||  |||||||||| ||||||||||||||||||||||||    
T  47955363 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctta 47955303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 50615624 - 50615674
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||||||||||||| |||||  |||||||||||||||||||||||||    
T  50615624 gtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 50615674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 50623452 - 50623502
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||||||||||||| |||||  |||||||||||||||||||||||||    
T  50623452 gtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 50623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 1176766 - 1176717
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  1176766 tgcaaaatcgcacaattagcaaaatataggggggaaagtgcaattaagcc 1176717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 8108996 - 8109049
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  8108996 gtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctt 8109049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 22149702 - 22149755
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  22149702 gtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaaacctt 22149755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 39692003 - 39692056
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcctt 146  Q
    |||||||||||||||||| |||||| ||| ||||||||||||||||||||||||    
T  39692003 gtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaagcctt 39692056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 49284460 - 49284407
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  49284460 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctt 49284407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 999161 - 999109
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctta 147  Q
    ||||||||||||||||| |||||  |||||||||||||||||||||| |||||    
T  999161 tgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaaacctta 999109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 6002288 - 6002237
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcc 144  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  6002288 gtgcaaaatcacacaattgacaaaagataggggtgaaaagtgcaattaagcc 6002237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 48190822 - 48190771
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  48190822 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 48190771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 88 - 141
Target Start/End: Complemental strand, 1176893 - 1176839
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaa 141  Q
    ||||| ||||||||| |||||||| ||||||||||||||| ||||||||||||||    
T  1176893 gagggggtgcaaaattgcacaattgacaaaagatagggggtaaaagtgcaattaa 1176839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 20371356 - 20371406
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||  ||||  |||||||||||||||||||||||||    
T  20371356 gtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 20371406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 20480615 - 20480665
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||  ||||  |||||||||||||||||||||||||    
T  20480615 gtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 20480665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 27172166 - 27172116
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||  ||||  |||||||||||||||||||||||||    
T  27172166 gtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 27172116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 46056952 - 46056904
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagc 143  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  46056952 gtgcaaaatcgcaaaattagcaaaagataggggg-aaagtgcaattaagc 46056904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 47498498 - 47498547
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagc 143  Q
    |||||||| ||||||||| |||||  ||||||||||||||||||||||||    
T  47498498 gtgcaaaaccgcacaattgacaaactatagggggaaaagtgcaattaagc 47498547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 1176934 - 1176982
Alignment:
Q  14 ttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagat 62  Q
    |||| |||||||||| |||||||||||||||||||| ||| ||||||||    
T  1176934 ttcccctcttttaataatgattttgaacaaaacacaattgacaaaagat 1176982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 48191358 - 48191410
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    |||||||||||||| |||  ||||||||||||| |||||||||||||||||||    
T  48191358 gtgcaaaatcgcaccattggcaaaagataggggtgaaaagtgcaattaagcct 48191410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 50615289 - 50615237
Alignment:
Q  96 gcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcctta 147  Q
    |||||||||||||||| |||||  |||||||| ||||||||||||||||||||    
T  50615289 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctta 50615237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 50623117 - 50623065
Alignment:
Q  96 gcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcctta 147  Q
    |||||||||||||||| |||||  |||||||| ||||||||||||||||||||    
T  50623117 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctta 50623065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 26814745 - 26814694
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggg-ggaaaagtgcaattaagcc 144  Q
    |||||||||||||||||| |||||  |||||| |||||||||||||||||||    
T  26814745 gtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagcc 26814694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 999529 - 999579
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcct 145  Q
    |||||||||||||||||  |||   ||||||||||||||||||||||||||    
T  999529 tgcaaaatcgcacaattggcaatctatagggggaaaagtgcaattaagcct 999579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 19007783 - 19007733
Alignment:
Q  96 gcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||  ||||  |||||||| ||||||||||||||||||    
T  19007783 gcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagcctt 19007733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 41082959 - 41082909
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcc 144  Q
    |||||||||||||||||  |||||||||||||| |||||| ||||||||||    
T  41082959 tgcaaaatcgcacaattggcaaaagatagggggaaaaagtacaattaagcc 41082909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 1177016 - 1177069
Alignment:
Q  89 agggagtgcaaaatcgcacaattaacaaaagataggg-ggaaaagtgcaattaa 141  Q
    |||| ||||||||| ||||||||| | |||||||||| ||||||||||||||||    
T  1177016 agggggtgcaaaattgcacaattagcgaaagatagggaggaaaagtgcaattaa 1177069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 20371089 - 20371037
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctta 147  Q
    ||||||||| |||||||| |||||  |||||||| |||||||||||||||||||    
T  20371089 gtgcaaaattgcacaattgacaaactataggggg-aaagtgcaattaagcctta 20371037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 49317801 - 49317752
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||| ||||||||  ||||  |||||||||||||||||||||||||    
T  49317801 tgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 49317752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 49318170 - 49318219
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||||||||||||  ||||  |||||||| ||||||||||||||||    
T  49318170 tgcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagcc 49318219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 49318447 - 49318496
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||||| | |||  |||||||||||| ||||||||||||    
T  49318447 tgcaaaatcgcacaattgataaactatagggggaaaaatgcaattaagcc 49318496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 26815122 - 26815174
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    |||||||||||||||||| | |||  ||||||| |||||||||||||||||||    
T  26815122 gtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagcct 26815174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 28634160 - 28634208
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaa 141  Q
    |||||||||||||||||| |||||  ||| |||||||||||||||||||    
T  28634160 gtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 28634208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 146
Target Start/End: Complemental strand, 31847945 - 31847893
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcctt 146  Q
    |||||||| ||||||||| ||||||||| ||||| ||||||||||||| ||||    
T  31847945 tgcaaaattgcacaattagcaaaagataagggggtaaagtgcaattaaacctt 31847893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 32163046 - 32163098
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||  ||||||| |||||||||||||||||||    
T  32163046 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 32163098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 42611617 - 42611665
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaa 141  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||||||    
T  42611617 gtgcaaaatcgcacaattgacaaactataggggagaaaagtgcaattaa 42611665  T

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Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 44911076 - 44911024
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||| ||| ||||| |||||||||||||||||    
T  44911076 gtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaattaagcct 44911024  T

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Target: chr7 (Bit Score: 73; Significance: 1e-33; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 9412157 - 9412021
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgcacaat 110  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| | | |||||| |||         ||||| |||||||||||||||||    
T  9412157 ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtggaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaat 9412058  T
Q  111 taacaaaagat-agggggaaaagtgcaattaagcctt 146  Q
    ||||||||||| |||||||||||||||||||||||||    
T  9412057 taacaaaagataagggggaaaagtgcaattaagcctt 9412021  T

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Target: chr7; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 3687489 - 3687353
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc--nnnnnnnngagggagtgcaaaatcgcacaa 109  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||          ||||| ||||||||||||||||    
T  3687489 ttttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaa 3687390  T
Q  110 ttaacaaaagata--gggggaaaagtgcaattaagcc 144  Q
    |||||||||||||  ||||||||||||||||||||||    
T  3687389 ttaacaaaagatagggggggaaaagtgcaattaagcc 3687353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 6908346 - 6908212
Alignment:
Q  12 ttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcact-cnnnnnnnngagggagtgcaaaatcgcacaat 110  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||           |  | |||||||||||||||||    
T  6908346 ttttcctctcttttaatgatgattttgaacaaaacacaattggcaaaagatagagtgcaaaatcgctaaaaaaaaaaaaaagggtgcaaaatcgcacaat 6908247  T
Q  111 taacaaaagatagggggaaaagtgcaattaagcct 145  Q
    |||||| ||||||||||||||||||||||||||||    
T  6908246 taacaatagatagggggaaaagtgcaattaagcct 6908212  T

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Target: chr7; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 27096264 - 27096392
Alignment:
Q  14 ttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnn-gagggagtgcaaaatcgcacaatta 112  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||| || | | |||||||| |||         |||||  ||||||||| |||||||     
T  27096264 ttcccctcttttaatgatgattttgaacaaaacacaattggcaaaatatggggtgcaaaatcgctcaaaaaagaagaggggatgcaaaatcacacaattg 27096363  T
Q  113 acaaaagatagggggaaaagtgcaattaa 141  Q
    |||||||||||||||||||||||||||||    
T  27096364 acaaaagatagggggaaaagtgcaattaa 27096392  T

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Target: chr7; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 27182039 - 27181911
Alignment:
Q  14 ttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnn-gagggagtgcaaaatcgcacaatta 112  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||| || | | |||||||| |||         |||||  ||||||||| |||||||     
T  27182039 ttcccctcttttaatgatgattttgaacaaaacacaattggcaaaatatggggtgcaaaatcgctcaaaaaagaagaggggatgcaaaatcacacaattg 27181940  T
Q  113 acaaaagatagggggaaaagtgcaattaa 141  Q
    |||||||||||||||||||||||||||||    
T  27181939 acaaaagatagggggaaaagtgcaattaa 27181911  T

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Target: chr7; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 23686646 - 23686772
Alignment:
Q  19 ctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcact-cnnnnnnnngagggagtgcaaaatcgcacaattaacaaa 117  Q
    ||||||||||||||||||||||||||||||| |||||||||||| | | |||||||| || |        ||||| || |||||||||||||||| ||||    
T  23686646 ctcttttaatgatgattttgaacaaaacacatttggcaaaagatggggtgcaaaatcgctccaaaaaaaagaggg-gt-caaaatcgcacaattagcaaa 23686743  T
Q  118 agataggggg-aaaagtgcaattaagcct 145  Q
    |||||||||| ||||||||||||||||||    
T  23686744 agatagggggaaaaagtgcaattaagcct 23686772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 8953886 - 8953941
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagc 143  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8953886 gagggggtgcaaaattgcacaattaacaaaagatagggggaaaagtgcaattaagc 8953941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 142
Target Start/End: Complemental strand, 29291939 - 29291808
Alignment:
Q  13 tttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc-nnnnnnnngagggagtgcaaaatcgcacaatt 111  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||| | | | |||||| |||         ||||| ||||||||||||| ||||    
T  29291939 tttcccctcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgtaaaatcgctctaaaaaaaagagggggtgcaaaatcgcataatt 29291840  T
Q  112 aacaaaagataggg-ggaaaagtgcaattaag 142  Q
    | |||||||||||| | |||||||||||||||    
T  29291839 atcaaaagatagggagaaaaagtgcaattaag 29291808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 13772750 - 13772681
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcac 77  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| | | ||||||||||    
T  13772750 ccccttttcctctattttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcac 13772681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 5349587 - 5349489
Alignment:
Q  19 ctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcacaattaacaaaa 118  Q
    |||||||||||||||||||||||||||||| |||| |||||||| | | |||||||| |||         |||| |||||||||||||||||||||||||    
T  5349587 ctcttttaatgatgattttgaacaaaacacggttgacaaaagatggggtgcaaaatcgctcaaaaaaa--agggggtgcaaaatcgcacaattaacaaaa 5349490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 13744236 - 13744288
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    |||||||||||||||||| |||||  |||||||||||||||||||||||||||    
T  13744236 gtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcctt 13744288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 5349736 - 5349784
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  5349736 gtgcaaaatcgcacaattaacaaaagatagggg--aaagtgcaattaagcc 5349784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 9412322 - 9412380
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcct 145  Q
    ||||| ||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  9412322 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 9412380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 23686471 - 23686421
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||||||| | ||||||| |||||||||||||||||||||||||||||||    
T  23686471 gtgcaaaattgtacaattagcaaaagatagggggaaaagtgcaattaagcc 23686421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 35080010 - 35079960
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||| | |||||||| |||||||||||||||||||||||||||||||    
T  35080010 gtgcaaaaccccacaattagcaaaagatagggggaaaagtgcaattaagcc 35079960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 44600138 - 44600192
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcctta 147  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  44600138 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctta 44600192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 48359370 - 48359320
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||||||||||||| |||||  |||||||||||||||||||||||||    
T  48359370 gtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 48359320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 3687653 - 3687710
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcc 144  Q
    ||||| ||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  3687653 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 3687710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 5735306 - 5735253
Alignment:
Q  91 ggagtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagc 143  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  5735306 ggagtgcaaaatcgcacaattagccaaagataggggagaaaagtgcaattaagc 5735253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 13772898 - 13772955
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcc 144  Q
    ||||| ||||||||||||||||||| |||| |||| ||||||||||||||||||||||    
T  13772898 gagggggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgcaattaagcc 13772955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 13772692 - 13772640
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggg-ggaaaagtgcaattaagcct 145  Q
    |||||||||| |||||||| |||||||||||| ||||||||||||||||||||    
T  13772692 gtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaagcct 13772640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 33628604 - 33628672
Alignment:
Q  8 ccccttttcctctcttttaatgatga-ttttgaacaaaacacagttggcaaaagatagagcgcaaaatc 75  Q
    |||||||||||||||||||||||||| |||| ||||||| ||| |||||||||||| | | ||||||||    
T  33628604 ccccttttcctctcttttaatgatgattttttaacaaaaaacaattggcaaaagatggggtgcaaaatc 33628672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 34235810 - 34235762
Alignment:
Q  14 ttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagat 62  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  34235810 ttcccctcttttaaagatgattttgaacaaaacacaattggcaaaagat 34235762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 6908487 - 6908534
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 141  Q
    ||||||||||||||||||| ||||| |||||||| |||||||||||||    
T  6908487 gtgcaaaatcgcacaattagcaaaaaataggggggaaagtgcaattaa 6908534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 15567127 - 15567060
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatc 75  Q
    |||||||| | ||||||||||| ||||||||||||||||||| ||| |||||||| | | ||||||||    
T  15567127 cccctttttccctcttttaatgctgattttgaacaaaacacaattgacaaaagatggggtgcaaaatc 15567060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 22740594 - 22740641
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 141  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||||    
T  22740594 gtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 22740641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 27096094 - 27096047
Alignment:
Q  97 caaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  27096094 caaaatcgcacaattagcaaaatataggggggaaagtgcaattaagcc 27096047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 27182209 - 27182256
Alignment:
Q  97 caaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  27182209 caaaatcgcacaattagcaaaatataggggggaaagtgcaattaagcc 27182256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 38191488 - 38191619
Alignment:
Q  19 ctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagg-----gagtgcaaaatcgcacaattaa 113  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||||   |||||||| |||        ||||     | ||||||||||||| ||||||    
T  38191488 ctcttttaatgatgattttgaacaaaacacaattgacaaaaaataggatgcaaaatcgctcaaaaaaaagaggagggtgggtgcaaaatcgcataattaa 38191587  T
Q  114 caaaagatagggg-gaaaagtgcaattaagcc 144  Q
    |||||||||||||  |||| ||||||||||||    
T  38191588 caaaagataggggtaaaaaatgcaattaagcc 38191619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 44599540 - 44599489
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  44599540 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 44599489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 3205096 - 3205150
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcctta 147  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||||||||||||    
T  3205096 gtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctta 3205150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 17157018 - 17156964
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcctta 147  Q
    |||||||||||||||||| |||||  |||||||| ||||||||||||||||||||    
T  17157018 gtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctta 17156964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 18925193 - 18925143
Alignment:
Q  9 cccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaa 59  Q
    ||||||| | ||||||||||||||||||||||||||||||| ||| |||||    
T  18925193 ccctttttccctcttttaatgatgattttgaacaaaacacaattgacaaaa 18925143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 22740207 - 22740153
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcctta 147  Q
    |||||||||||||||||| |||||  |||||||| ||||||||||||||||||||    
T  22740207 gtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctta 22740153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 5735463 - 5735512
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaa 57  Q
    ||||||| || ||||||||||||||||||||||||||| ||| |||||||    
T  5735463 cccctttccccctcttttaatgatgattttgaacaaaatacaattggcaa 5735512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 5735553 - 5735598
Alignment:
Q  97 caaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaa 141  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  5735553 caaaatcgcacaattaataaaagatagggggaaaaagtgcaattaa 5735598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 13863964 - 13864013
Alignment:
Q  99 aaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcctta 147  Q
    |||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  13863964 aaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctta 13864013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 20419327 - 20419380
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcctt 146  Q
    |||||||||||||||||| |||||  ||||||| ||||||||||||||||||||    
T  20419327 gtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 20419380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 131
Target Start/End: Original strand, 35080226 - 35080263
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaa 131  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  35080226 gtgcaaaatcgcacaattaacaaaagataaggggaaaa 35080263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 13863364 - 13863312
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||||||||||| ||||| |||||||||||||    
T  13863364 gtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 13863312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 33628444 - 33628392
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctta 147  Q
    |||||||| ||||||||| ||||||||| || |||||||||||||||| ||||    
T  33628444 tgcaaaattgcacaattagcaaaagataaggagaaaagtgcaattaagtctta 33628392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 36527434 - 36527382
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||||| ||||    
T  36527434 gtgcaaaatcgcacaattgacaaactataggggaaaaagtgcaattaaacctt 36527382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 18864405 - 18864456
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||  |||||||||||||| |||||||||||    
T  18864405 gtgcaaaatcgcacaattggcaaactatagggggaaaagtacaattaagcct 18864456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 18925113 - 18925062
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggg-ggaaaagtgcaattaagcc 144  Q
    ||||||||| ||||||||| ||||||||||||  ||||||||||||||||||    
T  18925113 gtgcaaaattgcacaattagcaaaagatagggaagaaaagtgcaattaagcc 18925062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 40017452 - 40017495
Alignment:
Q  98 aaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 141  Q
    |||||| ||||||||| ||||||||||||||||||| |||||||    
T  40017452 aaaatcacacaattaataaaagatagggggaaaagtacaattaa 40017495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 35080087 - 35080034
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagat 62  Q
    |||||||||  ||||||||||||||||||||||| ||||||| ||| ||||||||    
T  35080087 ccccttttcacctcttttaatgatgattttgaac-aaacacaattgtcaaaagat 35080034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 37972399 - 37972453
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcctta 147  Q
    ||||||||||||||||||  ||||  ||||||| |||||||||||||||||||||    
T  37972399 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctta 37972453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 39983750 - 39983700
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagc 143  Q
    |||| |||||||| |||||| |||||||| |||||||||||||||||||||    
T  39983750 gtgcgaaatcgcataattaataaaagataagggggaaaagtgcaattaagc 39983700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 18925325 - 18925373
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagc 143  Q
    ||||||||||||||||||| ||||| ||| | ||||||||||||||||||    
T  18925325 gtgcaaaatcgcacaattagcaaaatata-gaggaaaagtgcaattaagc 18925373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 38826916 - 38826969
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcctt 146  Q
    |||||||||||||||||| |||||  ||| ||||||||| ||||||||||||||    
T  38826916 gtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcctt 38826969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 8643769 - 8643821
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggg-ggaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||   |||||||||||  |||||||||||||||||||    
T  8643769 gtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaagcct 8643821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 10533085 - 10533033
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||  |||||||| ||||||||||||||||||    
T  10533085 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 10533033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 18864018 - 18863970
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaa 141  Q
    |||||||||||||||||| |||||  ||| |||||||||||||||||||    
T  18864018 gtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 18863970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 146
Target Start/End: Complemental strand, 29292972 - 29292920
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcctt 146  Q
    |||||||||||||||||  ||||  |||||||| |||||||||||||||||||    
T  29292972 tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctt 29292920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 33628663 - 33628715
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaagcct 145  Q
    |||||||||||||||||||  ||||||||| ||| |||||||||||| |||||    
T  33628663 gtgcaaaatcgcacaattagtaaaagatagagggaaaaagtgcaatttagcct 33628715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 37889262 - 37889314
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcct 145  Q
    ||||||||||||||||||  ||||  ||||||| |||||||||||||||||||    
T  37889262 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 37889314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 68; Significance: 1e-30; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 1245 - 1118
Alignment:
Q  19 ctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnn-gagggagtgcaaaatcgcacaattaacaaa 117  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| | |||||||| |||         ||||| ||||||||||||||||||||||||    
T  1245 ctcttttaatgatgattttgaacaaaacacaattggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaa 1146  T
Q  118 agataggggg-aaaagtgcaattaagcc 144  Q
    |||||||||| |||||||||||||||||    
T  1145 agatagggggaaaaagtgcaattaagcc 1118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 1417 - 1474
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcc 144  Q
    ||||| ||||||||||||||||||  |||||||||||||| |||||||||||||||||    
T  1417 gagggggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 1474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 1699 - 1834
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc--nnnnnnnngagggagtgcaaaatcgc 105  Q
    |||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||| | |||||||| |||          ||||  ||||||||||||    
T  1699 ccccatttcccctcttttaatgatgattttaaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaagaaaagaggaggtgcaaaatcgc 1798  T
Q  106 acaattaacaaaagatagggggaaaagtgcaattaa 141  Q
    ||||| ||||||||||||||||||||||||||||||    
T  1799 acaataaacaaaagatagggggaaaagtgcaattaa 1834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 1561 - 1511
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    |||||||||| |||||||  |||||||||| || |||||||||||||||||    
T  1561 gtgcaaaatcacacaattggcaaaagatagaggaaaaagtgcaattaagcc 1511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 64; Significance: 3e-28; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 17071 - 17209
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactc--nnnnnnnngagggagtgcaaaatcgc 105  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| | | |||||||| |||          ||||  ||||||||| ||    
T  17071 ccccttttcctctcttttaaggatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgctcaaaaaaaaaagaggcggtgcaaaattgc 17170  T
Q  106 acaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  17171 acaattagcaaaagatagggggaaaagtgcaattaagcc 17209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 16908 - 16853
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||| ||||| ||||||||||||| ||||||||||||| ||||| |||||||||||    
T  16908 gagggggtgcataatcgcacaattagcaaaagataggggaaaaag-gcaattaagcc 16853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 6532 - 6391
Alignment:
Q  9 cccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcact--cnnnnnnnngagggagtgcaaaatcgca 106  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | | |||||||| ||           ||||| |||||||||||||    
T  6532 cccttttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctaaaaaaaaaaagagggggtgcaaaatcgca 6433  T
Q  107 caattaacaaaagata-gggggaaaagtgcaattaagcctta 147  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  6432 caattagcaaaagataggggggaaaagtgcaattaagcctta 6391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 6694 - 6750
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6694 gagggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcc 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 58; Significance: 1e-24; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 439117 - 439254
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcac 107  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||| |||||||| | | |||||||| |||        |||||  |||||||||||||    
T  439117 ccccttttcctctcttttaatgatgattttgaagaaaacacaattgacaaaagatggggtgcaaaatcgctc-aaaaaaagaggggatgcaaaatcgcac 439215  T
Q  108 aattaacaaaagat-agggggaaaagtgcaattaagcct 145  Q
    ||||| |||||||| ||||| ||||||||||||||||||    
T  439216 aattagcaaaagataaggggaaaaagtgcaattaagcct 439254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 183495 - 183367
Alignment:
Q  14 ttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnn-gagggagtgcaaaatcgcacaatta 112  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||| ||   | |||||||| |||         ||| | ||||||||||| ||||||     
T  183495 ttcccctcttttaatgatgattttgaacaaaacacaattggcaaaatatgaggtgcaaaatcgctcaaaaaagaagagagggtgcaaaatcgtacaattg 183396  T
Q  113 acaaaagatagggggaaaagtgcaattaa 141  Q
    |||||||||||||||||||||||||||||    
T  183395 acaaaagatagggggaaaagtgcaattaa 183367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 438987 - 438930
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaagcc 144  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  438987 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 438930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 183670 - 183718
Alignment:
Q  99 aaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcctt 146  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||    
T  183670 aaatcgcacaattagcaaaatataggggggaaaagtgcaattaagcctt 183718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 6742 - 6609
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcac 107  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||         ||| | |||||||||| |||    
T  6742 cccctttccccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgct-aaaaaaaagagag-gtgcaaaatcacac 6645  T
Q  108 aattaacaaaagata-gggggaaaagtgcaattaag 142  Q
    ||||||||||||||| ||||||| ||||||||||||    
T  6644 aattaacaaaagataggggggaacagtgcaattaag 6609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 6879 - 6927
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagc 143  Q
    ||||||||| ||||||||  |||||||||||||| |||||||||||||||    
T  6879 gtgcaaaat-gcacaattggcaaaagataggggggaaagtgcaattaagc 6927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 205822 - 205685
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatcactcnnnnnnnngagggagtgcaaaatcgcac 107  Q
    |||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||   | ||||||||  ||        ||||| ||||||||||||||    
T  205822 ccccatttcccctcttttgattatgattttgaacaaaacacaattggcaaaagatgaggtgcaaaatcgttcaaaaaaa-gagggggtgcaaaatcgcac 205724  T
Q  108 aattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    ||||| |||||||||||| ||||| ||||||||||||||    
T  205723 aattagcaaaagatagggagaaaaatgcaattaagcctt 205685  T

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Target: scaffold0192 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 25205 - 25138
Alignment:
Q  8 ccccttttcctctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatc 75  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | | ||||||||    
T  25205 ccccttttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatc 25138  T

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Target: scaffold0192; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 25366 - 25425
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcctt 146  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  25366 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcctt 25425  T

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Target: scaffold0002 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 411979 - 411923
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  411979 gagggggtgcaaaatcgcacaattgacaaaagatagggggtaaagtgcaattaagcc 411923  T

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Target: scaffold0376 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 7505 - 7453
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    ||||||||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  7505 gtgcaaaatcgcataattagcaaaagataggggaaaaagtgcaattaagcctt 7453  T

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Target: scaffold0376; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 7597 - 7653
Alignment:
Q  88 gagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||| || |||||||||||||||| ||||||||||||| |||||||||||||||||    
T  7597 gagggggtacaaaatcgcacaattagcaaaagataggggaaaaagtgcaattaagcc 7653  T

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Target: scaffold0376; HSP #3
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 7552 - 7496
Alignment:
Q  19 ctcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatc 75  Q
    ||||||||||||||||||||||||||||||| |||||||| ||| | | ||||||||    
T  7552 ctcttttaatgatgattttgaacaaaacacaattggcaaacgatggggtgcaaaatc 7496  T

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Target: scaffold0433 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 10749 - 10694
Alignment:
Q  20 tcttttaatgatgattttgaacaaaacacagttggcaaaagatagagcgcaaaatc 75  Q
    |||||||||||||||||||||||||||||| |||||||||||| | | ||||||||    
T  10749 tcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatc 10694  T

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Target: scaffold0069 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 50510 - 50560
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||  ||||  |||||||||||||||||||||||||    
T  50510 gtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 50560  T

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Target: scaffold0069; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 50124 - 50072
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctta 147  Q
    ||||||||| |||||||| |||||  |||||||| |||||||||||||||||||    
T  50124 gtgcaaaattgcacaattgacaaactataggggg-aaagtgcaattaagcctta 50072  T

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Target: scaffold0460 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 380 - 327
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcctta 147  Q
    ||||||||||||||||| |||||  |||||||| ||||||||||||||||||||    
T  380 tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctta 327  T

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Target: scaffold0460; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 766 - 816
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||  ||||  ||||||| |||||||||||||||||    
T  766 gtgcaaaatcgcacaattggcaaactataggggaaaaagtgcaattaagcc 816  T

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Target: scaffold0535 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 146
Target Start/End: Complemental strand, 10062 - 10010
Alignment:
Q  95 tgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcctt 146  Q
    |||||||||| ||||||  |||||||||||||| |||||||||||||||||||    
T  10062 tgcaaaatcgtacaattggcaaaagatagggggcaaaagtgcaattaagcctt 10010  T

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Target: scaffold0328 (Bit Score: 32; Significance: 0.000000004; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 6199 - 6152
Alignment:
Q  98 aaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaagcc 144  Q
    ||||||||||||||| |||||||||| || ||||||||||||||||||    
T  6199 aaaatcgcacaattagcaaaagatagaggtgaaaagtgcaattaagcc 6152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 6798 - 6849
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaagcc 144  Q
    ||||||||||||||||||  ||||||||||||| ||||| ||||||||||||    
T  6798 gtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 6849  T

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Target: scaffold0176 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 20048 - 20098
Alignment:
Q  96 gcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaagcct 145  Q
    |||||||||||||||| |||||  ||| |||||||||||||||||||||||    
T  20048 gcaaaatcgcacaattgacaaactataagggggaaaagtgcaattaagcct 20098  T

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Target: scaffold0176; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 19671 - 19619
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||  ||||  ||| |||||||| ||||||||||||||    
T  19671 gtgcaaaatcgcacaattggcaaactatatggggaaaattgcaattaagcctt 19619  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 38698 - 38751
Alignment:
Q  94 gtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcctt 146  Q
    ||||||||||||||||||  ||||  |||||||| |||||||||||||||||||    
T  38698 gtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcctt 38751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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