View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15937_low_15 (Length: 330)

Name: NF15937_low_15
Description: NF15937
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15937_low_15
NF15937_low_15
[»] chr5 (26 HSPs)
chr5 (12-312)||(5467785-5468091)
chr5 (47-119)||(7997166-7997238)
chr5 (47-113)||(24906307-24906373)
chr5 (67-117)||(25863211-25863261)
chr5 (68-113)||(6247630-6247675)
chr5 (68-113)||(21191062-21191107)
chr5 (68-113)||(21576751-21576796)
chr5 (68-113)||(28588680-28588725)
chr5 (68-117)||(31264446-31264495)
chr5 (68-112)||(39698549-39698593)
chr5 (68-111)||(6471897-6471940)
chr5 (66-113)||(13287405-13287452)
chr5 (46-117)||(18586291-18586361)
chr5 (89-123)||(9929649-9929683)
chr5 (46-116)||(26205763-26205833)
chr5 (68-113)||(3966511-3966556)
chr5 (68-113)||(7677713-7677758)
chr5 (68-113)||(14674277-14674322)
chr5 (68-113)||(23015995-23016040)
chr5 (68-113)||(30502394-30502439)
chr5 (68-113)||(30542737-30542782)
chr5 (68-113)||(31084331-31084376)
chr5 (68-113)||(41091263-41091308)
chr5 (68-113)||(42893368-42893413)
chr5 (46-111)||(43001786-43001851)
chr5 (70-106)||(10022642-10022678)
[»] scaffold0008 (1 HSPs)
scaffold0008 (46-144)||(263341-263445)
[»] chr3 (37 HSPs)
chr3 (68-144)||(34307755-34307831)
chr3 (68-113)||(17005625-17005670)
chr3 (66-119)||(24205041-24205094)
chr3 (68-111)||(25948895-25948938)
chr3 (68-119)||(35994738-35994788)
chr3 (68-113)||(7928458-7928503)
chr3 (68-113)||(8383265-8383310)
chr3 (68-113)||(26508118-26508163)
chr3 (68-113)||(28918009-28918054)
chr3 (47-111)||(23184080-23184144)
chr3 (68-111)||(4987299-4987342)
chr3 (68-106)||(12704015-12704053)
chr3 (66-120)||(12704656-12704710)
chr3 (66-120)||(14223852-14223906)
chr3 (47-113)||(20691306-20691372)
chr3 (66-120)||(21211294-21211348)
chr3 (38-120)||(41319309-41319391)
chr3 (70-120)||(51512182-51512232)
chr3 (66-120)||(52369781-52369835)
chr3 (68-113)||(1509547-1509592)
chr3 (68-113)||(10954960-10955005)
chr3 (68-105)||(11251986-11252023)
chr3 (68-113)||(11665952-11665997)
chr3 (68-113)||(21256992-21257037)
chr3 (66-119)||(25365468-25365521)
chr3 (68-113)||(29508452-29508497)
chr3 (68-113)||(34910325-34910370)
chr3 (68-113)||(49651792-49651837)
chr3 (68-113)||(51206359-51206404)
chr3 (68-113)||(55401083-55401128)
chr3 (68-112)||(10268493-10268537)
chr3 (68-112)||(12083911-12083955)
chr3 (68-112)||(14209121-14209165)
chr3 (68-108)||(14840302-14840342)
chr3 (69-113)||(20503474-20503518)
chr3 (68-112)||(32804547-32804591)
chr3 (68-112)||(49505161-49505205)
[»] chr6 (36 HSPs)
chr6 (68-112)||(17341671-17341715)
chr6 (46-113)||(7265599-7265666)
chr6 (68-118)||(2117084-2117134)
chr6 (46-120)||(17168462-17168536)
chr6 (66-120)||(34446571-34446625)
chr6 (68-113)||(9025500-9025545)
chr6 (68-113)||(10770680-10770725)
chr6 (68-113)||(16766705-16766750)
chr6 (68-113)||(34595142-34595187)
chr6 (68-112)||(19040360-19040404)
chr6 (68-112)||(31384928-31384972)
chr6 (68-111)||(32511674-32511717)
chr6 (68-106)||(1532248-1532286)
chr6 (69-107)||(16388245-16388283)
chr6 (68-113)||(1681766-1681811)
chr6 (68-113)||(7086803-7086848)
chr6 (66-111)||(7569176-7569221)
chr6 (68-113)||(7801162-7801207)
chr6 (68-113)||(7938124-7938169)
chr6 (68-113)||(7977836-7977881)
chr6 (68-113)||(9107376-9107421)
chr6 (68-113)||(9522899-9522944)
chr6 (68-113)||(9617442-9617487)
chr6 (72-113)||(11591876-11591917)
chr6 (68-113)||(16833316-16833361)
chr6 (68-113)||(26178687-26178732)
chr6 (72-113)||(26562701-26562742)
chr6 (68-113)||(28152107-28152151)
chr6 (68-113)||(28715303-28715348)
chr6 (68-113)||(30866150-30866195)
chr6 (68-105)||(31579239-31579276)
chr6 (68-113)||(31959167-31959212)
chr6 (64-113)||(32299279-32299328)
chr6 (68-104)||(5970123-5970159)
chr6 (69-113)||(9629392-9629436)
chr6 (68-112)||(12696332-12696376)
[»] chr8 (29 HSPs)
chr8 (45-120)||(44067501-44067576)
chr8 (68-113)||(11927092-11927137)
chr8 (66-120)||(13009492-13009546)
chr8 (44-93)||(4114229-4114278)
chr8 (68-113)||(4948660-4948705)
chr8 (68-113)||(11944673-11944718)
chr8 (68-113)||(15816135-15816180)
chr8 (68-113)||(20679401-20679446)
chr8 (68-113)||(25566849-25566894)
chr8 (68-113)||(34897093-34897138)
chr8 (68-112)||(3025559-3025603)
chr8 (69-113)||(40332200-40332244)
chr8 (68-116)||(41831943-41831991)
chr8 (66-113)||(20873075-20873122)
chr8 (39-113)||(13844602-13844676)
chr8 (68-106)||(14134707-14134745)
chr8 (46-112)||(30077394-30077460)
chr8 (68-113)||(2572062-2572107)
chr8 (67-116)||(3911117-3911166)
chr8 (68-113)||(4786344-4786389)
chr8 (68-113)||(8342980-8343025)
chr8 (66-111)||(22770968-22771013)
chr8 (68-113)||(31236583-31236628)
chr8 (68-113)||(33405390-33405435)
chr8 (68-113)||(34222955-34223000)
chr8 (55-111)||(3508047-3508103)
chr8 (68-112)||(8343324-8343368)
chr8 (46-102)||(13018267-13018323)
chr8 (68-112)||(24362209-24362253)
[»] chr1 (45 HSPs)
chr1 (46-117)||(22794080-22794151)
chr1 (12-114)||(17831536-17831638)
chr1 (68-113)||(1486715-1486760)
chr1 (44-117)||(3490392-3490465)
chr1 (68-113)||(1864886-1864931)
chr1 (68-113)||(9629906-9629951)
chr1 (68-113)||(9828052-9828097)
chr1 (66-111)||(17425101-17425146)
chr1 (12-113)||(22881622-22881723)
chr1 (68-113)||(24577192-24577237)
chr1 (68-113)||(31015051-31015096)
chr1 (68-113)||(36878469-36878514)
chr1 (68-113)||(40258939-40258984)
chr1 (68-112)||(398772-398816)
chr1 (68-112)||(7918218-7918262)
chr1 (69-113)||(18337338-18337382)
chr1 (68-111)||(113307-113350)
chr1 (68-119)||(12443460-12443511)
chr1 (80-119)||(17705586-17705625)
chr1 (70-113)||(44482240-44482283)
chr1 (46-112)||(15323149-15323215)
chr1 (70-112)||(25361896-25361938)
chr1 (68-106)||(34298444-34298482)
chr1 (47-113)||(38078667-38078733)
chr1 (68-106)||(40181879-40181917)
chr1 (67-113)||(47989504-47989550)
chr1 (68-113)||(1704998-1705043)
chr1 (80-113)||(5944303-5944336)
chr1 (46-111)||(6427336-6427401)
chr1 (68-113)||(6612177-6612222)
chr1 (68-113)||(18190114-18190159)
chr1 (68-113)||(22515893-22515938)
chr1 (46-107)||(23531790-23531851)
chr1 (70-111)||(25098563-25098604)
chr1 (72-113)||(25272494-25272535)
chr1 (68-113)||(37598840-37598884)
chr1 (67-120)||(39101181-39101234)
chr1 (68-113)||(42359455-42359500)
chr1 (68-113)||(52903257-52903302)
chr1 (66-118)||(351085-351137)
chr1 (68-112)||(10233261-10233305)
chr1 (70-106)||(19324572-19324608)
chr1 (68-104)||(27471581-27471617)
chr1 (80-112)||(35919283-35919315)
chr1 (68-120)||(49872845-49872897)
[»] chr7 (34 HSPs)
chr7 (66-120)||(43249999-43250053)
chr7 (64-119)||(12278839-12278894)
chr7 (66-120)||(5938478-5938532)
chr7 (67-113)||(15902829-15902875)
chr7 (68-113)||(11665446-11665491)
chr7 (68-113)||(19992009-19992054)
chr7 (68-113)||(24339650-24339695)
chr7 (68-113)||(26033467-26033512)
chr7 (68-111)||(25481910-25481953)
chr7 (66-116)||(4017797-4017847)
chr7 (64-106)||(16341500-16341542)
chr7 (67-113)||(23128667-23128713)
chr7 (68-109)||(1401033-1401074)
chr7 (68-105)||(2424622-2424659)
chr7 (68-113)||(3991332-3991377)
chr7 (68-113)||(5409842-5409887)
chr7 (68-113)||(7438714-7438759)
chr7 (68-113)||(9408340-9408385)
chr7 (68-113)||(20549799-20549844)
chr7 (68-113)||(21880160-21880205)
chr7 (66-119)||(23751906-23751959)
chr7 (68-113)||(26329388-26329433)
chr7 (68-113)||(27945049-27945094)
chr7 (68-105)||(29787383-29787420)
chr7 (15-112)||(42720897-42720994)
chr7 (53-113)||(7328697-7328757)
chr7 (68-112)||(10042945-10042989)
chr7 (68-112)||(17851439-17851483)
chr7 (69-113)||(19930947-19930991)
chr7 (73-113)||(22602716-22602756)
chr7 (68-112)||(22868050-22868094)
chr7 (65-113)||(23849464-23849512)
chr7 (68-112)||(32308128-32308172)
chr7 (68-112)||(35861972-35862016)
[»] chr4 (32 HSPs)
chr4 (66-120)||(24343513-24343567)
chr4 (68-117)||(14126113-14126162)
chr4 (68-113)||(54580029-54580074)
chr4 (47-101)||(12077815-12077869)
chr4 (68-113)||(8423724-8423769)
chr4 (47-120)||(8820395-8820468)
chr4 (68-117)||(22440602-22440651)
chr4 (68-113)||(29205452-29205497)
chr4 (68-112)||(28964255-28964299)
chr4 (68-111)||(11596360-11596403)
chr4 (46-120)||(20521850-20521922)
chr4 (46-109)||(30838196-30838259)
chr4 (68-111)||(36635332-36635375)
chr4 (68-106)||(903930-903968)
chr4 (67-113)||(12895280-12895326)
chr4 (66-116)||(19230312-19230362)
chr4 (66-120)||(20743277-20743331)
chr4 (68-113)||(5775364-5775409)
chr4 (68-113)||(6485617-6485662)
chr4 (68-113)||(12797344-12797388)
chr4 (68-113)||(21945511-21945556)
chr4 (68-113)||(23292992-23293037)
chr4 (68-113)||(30982884-30982929)
chr4 (67-120)||(31243547-31243600)
chr4 (66-123)||(32910557-32910614)
chr4 (68-113)||(35157991-35158036)
chr4 (68-113)||(40613458-40613503)
chr4 (68-112)||(3947773-3947817)
chr4 (46-120)||(20633471-20633542)
chr4 (69-105)||(21873385-21873421)
chr4 (69-105)||(21929246-21929282)
chr4 (68-120)||(40481645-40481696)
[»] scaffold0044 (1 HSPs)
scaffold0044 (69-113)||(53189-53233)
[»] chr2 (29 HSPs)
chr2 (46-105)||(28412336-28412395)
chr2 (66-116)||(10535762-10535812)
chr2 (68-113)||(12668429-12668474)
chr2 (68-113)||(30404856-30404901)
chr2 (68-113)||(30717536-30717581)
chr2 (68-113)||(34691811-34691856)
chr2 (68-113)||(34714223-34714268)
chr2 (49-113)||(18420440-18420504)
chr2 (68-111)||(18622614-18622657)
chr2 (68-111)||(21616770-21616813)
chr2 (70-120)||(11308003-11308053)
chr2 (66-120)||(19573984-19574038)
chr2 (47-105)||(21782832-21782890)
chr2 (68-106)||(28677917-28677955)
chr2 (68-113)||(2438725-2438770)
chr2 (68-113)||(5367200-5367245)
chr2 (67-112)||(17776594-17776639)
chr2 (68-113)||(23718034-23718079)
chr2 (68-113)||(24105706-24105751)
chr2 (67-120)||(25544488-25544541)
chr2 (47-112)||(35449500-35449565)
chr2 (68-113)||(36756350-36756395)
chr2 (68-113)||(37411250-37411295)
chr2 (68-113)||(42832282-42832327)
chr2 (68-113)||(44860328-44860373)
chr2 (68-112)||(21374706-21374750)
chr2 (68-112)||(27286299-27286343)
chr2 (68-112)||(31808085-31808129)
chr2 (68-112)||(39323272-39323316)
[»] scaffold0050 (1 HSPs)
scaffold0050 (68-113)||(70286-70331)
[»] scaffold0223 (1 HSPs)
scaffold0223 (68-112)||(20180-20224)
[»] scaffold0103 (1 HSPs)
scaffold0103 (68-111)||(51819-51862)
[»] scaffold0598 (1 HSPs)
scaffold0598 (46-120)||(8052-8126)
[»] scaffold0361 (1 HSPs)
scaffold0361 (68-110)||(14538-14580)
[»] scaffold0007 (1 HSPs)
scaffold0007 (66-116)||(225271-225321)
[»] scaffold0652 (1 HSPs)
scaffold0652 (68-113)||(468-513)
[»] scaffold0236 (1 HSPs)
scaffold0236 (68-113)||(25774-25819)
[»] scaffold0171 (2 HSPs)
scaffold0171 (80-113)||(23440-23473)
scaffold0171 (80-112)||(23531-23563)
[»] scaffold0123 (1 HSPs)
scaffold0123 (72-113)||(44531-44572)
[»] scaffold0036 (1 HSPs)
scaffold0036 (68-113)||(9753-9798)
[»] scaffold0027 (1 HSPs)
scaffold0027 (68-113)||(46690-46735)
[»] scaffold0021 (1 HSPs)
scaffold0021 (68-113)||(130490-130535)
[»] scaffold0020 (1 HSPs)
scaffold0020 (68-113)||(135318-135363)
[»] scaffold0011 (1 HSPs)
scaffold0011 (68-113)||(17755-17800)
[»] scaffold0246 (1 HSPs)
scaffold0246 (68-120)||(19584-19635)
[»] scaffold0136 (1 HSPs)
scaffold0136 (68-112)||(3856-3900)
[»] scaffold0066 (1 HSPs)
scaffold0066 (68-120)||(33363-33414)
[»] scaffold0004 (1 HSPs)
scaffold0004 (68-112)||(92815-92859)


Alignment Details
Target: chr5 (Bit Score: 256; Significance: 1e-142; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 12 - 312
Target Start/End: Complemental strand, 5468091 - 5467785
Alignment:
Q  12 atgaagcacggatatagacacatatatcagatacgaca------ctgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattat 105  Q
    ||||||||||||||||||||||||||| ||||| ||||      ||||||||||||| | |||||||||||||||||| |||||||||||||||||||||    
T  5468091 atgaagcacggatatagacacatatattagataagacatagacactgacacgtcaataccgataataatttgataaaatcacataattcagtgtaattat 5467992  T
Q  106 aagtgtcgtgtcggtatcacatacgacacgtgttcgatatcgggacaaggctactctaaaaagtgtttgtgattcatggggtgagagtgaaagcatggct 205  Q
    | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5467991 aggtgtcgtgtcggtgtcacatacgacacgtgttcgatatcgggacaaggctactctaaaaagtgtttgtgattcatggggtgagagtgaaagcatggct 5467892  T
Q  206 cacaccatgactgtggttacagagatattgaacatgcaattcaattgatagcataagcgacaaaaagataaactacatggaccaaagaactgaaagaaag 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5467891 cacaccatgactgtggttacagagatattgaacatgcaattcaattgatagcataagcgacaaaaagataaactacatggaccaaagaactgaaagaaag 5467792  T
Q  306 gcaacaa 312  Q
    |||||||    
T  5467791 gcaacaa 5467785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 7997238 - 7997166
Alignment:
Q  47 acactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcgg 119  Q
    ||||||||||| |||  | ||||||||||||| ||||  | ||||| ||||||||||||||||||||||||||    
T  7997238 acactgacacgccaacacggataataatttgagaaaatgatataatacagtgtaattataagtgtcgtgtcgg 7997166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 24906373 - 24906307
Alignment:
Q  47 acactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||  | ||||||||||||| ||||  ||||||||||||||||||| ||||||||    
T  24906373 acactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 24906307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 25863211 - 25863261
Alignment:
Q  67 ataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtc 117  Q
    |||||||||||| ||||  | ||||||||||||||||||||||||||||||    
T  25863211 ataataatttgagaaaatgatataattcagtgtaattataagtgtcgtgtc 25863261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 6247630 - 6247675
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  6247630 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 6247675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 21191107 - 21191062
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  21191107 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 21191062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 21576796 - 21576751
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  21576796 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 21576751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 28588725 - 28588680
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||||    
T  28588725 taataatttgagaaaatcacataattcagtgtaattataggtgtcg 28588680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 31264446 - 31264495
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcgtgtc 117  Q
    ||||||||||| ||||  ||||||||||||||||| ||||||||||||||    
T  31264446 taataatttgagaaaatgacataattcagtgtaatcataagtgtcgtgtc 31264495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 39698549 - 39698593
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| |||| |||||||||||||||||||| |||||||    
T  39698549 taataatttgaaaaaatcacataattcagtgtaattacaagtgtc 39698593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 6471940 - 6471897
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||    
T  6471940 taataatttgagaaaatcacataattcagtgtaattatatgtgt 6471897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 13287452 - 13287405
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||||| |||| ||||||||||||||||| || ||||||||    
T  13287452 gataataatttgaaaaaatcacataattcagtgtaactacaagtgtcg 13287405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 18586361 - 18586291
Alignment:
Q  46 gacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtc 117  Q
    |||||||||| ||| || | ||||||||||||| ||||  ||||||| ||||||||||||| ||||||||||    
T  18586361 gacactgacatgtcgatacggataataatttga-aaaatgacataatacagtgtaattataggtgtcgtgtc 18586291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 123
Target Start/End: Original strand, 9929649 - 9929683
Alignment:
Q  89 taattcagtgtaattataagtgtcgtgtcggtatc 123  Q
    |||||||||||||||||| ||||||||||||||||    
T  9929649 taattcagtgtaattatatgtgtcgtgtcggtatc 9929683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 26205833 - 26205763
Alignment:
Q  46 gacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtcgtgt 116  Q
    |||||||||||||| || | ||||| | ||||| ||||  ||||||||||||||||| ||| |||||||||    
T  26205833 gacactgacacgtcgataccgataaaattttgagaaaatgacataattcagtgtaatcataggtgtcgtgt 26205763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 3966511 - 3966556
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||| ||||||||||||||||| ||||||    
T  3966511 taataatttgagaaaatcacacaattcagtgtaattatatgtgtcg 3966556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 7677713 - 7677758
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||| ||||| ||||||||    
T  7677713 taataatttgaaaaaatcacataattcagtgcaattagaagtgtcg 7677758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 14674277 - 14674322
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||| |||||||||| ||||||||    
T  14674277 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 14674322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 23016040 - 23015995
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||| |||||| |||| |||||||||||||||||||||| ||||||    
T  23016040 taatcatttgagaaaatcacataattcagtgtaattataggtgtcg 23015995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 30502439 - 30502394
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||| |||||||||||||||||| ||||||    
T  30502439 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 30502394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 30542782 - 30542737
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||| |||||||||||||||||| ||||||    
T  30542782 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 30542737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 31084331 - 31084376
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||||| |||||||| ||||||||    
T  31084331 taataatttgaaaaaatcacataattcaatgtaattacaagtgtcg 31084376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 41091308 - 41091263
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||| |||||| |||| |||||||||||||||||||||| ||||||    
T  41091308 taatgatttgagaaaatcacataattcagtgtaattatatgtgtcg 41091263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 42893368 - 42893413
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||| ||||||||||| ||||||||    
T  42893368 taataatttgaaaaaatcacataatccagtgtaattacaagtgtcg 42893413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 43001786 - 43001851
Alignment:
Q  46 gacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    |||||||||| ||| |  ||| ||||||||||| ||||  ||||||||||||||||||| ||||||    
T  43001786 gacactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaattacaagtgt 43001851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 10022642 - 10022678
Alignment:
Q  70 ataatttgataaaaccacataattcagtgtaattata 106  Q
    |||||||||||||| || |||||||||||||||||||    
T  10022642 ataatttgataaaatcatataattcagtgtaattata 10022678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 144
Target Start/End: Complemental strand, 263445 - 263341
Alignment:
Q  46 gacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataag------tgtcgtgtcggtatcacatacgacacgtgtt 139  Q
    |||||||||| |||||  ||| ||||||||||| |||||||||||||||||||||||||||||      |||||||||||| ||| | ||||||||||||    
T  263445 gacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacgacacgtgtt 263346  T
Q  140 cgata 144  Q
    |||||    
T  263345 cgata 263341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 34307831 - 34307755
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggtatcacatacgacacgtgttcgata 144  Q
    ||||||||||| |||| |||||| ||||||||||||||||||||||||||||| ||  | ||||||||| |||||||    
T  34307831 taataatttgagaaaatcacatatttcagtgtaattataagtgtcgtgtcggtgtcggacacgacacgtcttcgata 34307755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 17005670 - 17005625
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||||||||| || ||||||||||||||||||||||||||    
T  17005670 taataatttgataaaatcatataattcagtgtaattataagtgtcg 17005625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 24205094 - 24205041
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcgg 119  Q
    ||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||    
T  24205094 gataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcgg 24205041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 25948938 - 25948895
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    ||||||||||| |||| |||||||||||||||||||||||||||    
T  25948938 taataatttgaaaaaatcacataattcagtgtaattataagtgt 25948895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 35994788 - 35994738
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcgg 119  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||||||||    
T  35994788 taataatttga-aaaatcacataattcagtgtaattacaagtgtcgtgtcgg 35994738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 7928458 - 7928503
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||||    
T  7928458 taataatttgaaaaaatcacataattcagtgtaattatatgtgtcg 7928503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 8383265 - 8383310
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| || ||||||||||||||||||||||||||    
T  8383265 taataatttgagaaaatcatataattcagtgtaattataagtgtcg 8383310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 26508118 - 26508163
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  26508118 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 26508163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 28918009 - 28918054
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  28918009 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 28918054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 23184144 - 23184080
Alignment:
Q  47 acactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    ||||||||||||||||  |||||||||||||| |||| || |||||||  |||||||||| ||||    
T  23184144 acactgacacgtcaatattgataataatttgacaaaatcatataattctatgtaattatatgtgt 23184080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 4987342 - 4987299
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||    
T  4987342 taataatttgaaaaaatcacataattcagtgtaattacaagtgt 4987299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 12704015 - 12704053
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattata 106  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  12704015 taataatttgagaaaagcacataattcagtgtaattata 12704053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 12704710 - 12704656
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    ||||||||||||| ||||  |||||||||| |||||| ||| |||||||||||||    
T  12704710 gataataatttgaaaaaatgacataattcaatgtaatcataggtgtcgtgtcggt 12704656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 14223906 - 14223852
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    ||||||||||||| ||||| | |||||| |||||| | |||||||||||||||||    
T  14223906 gataataatttgagaaaacgatataatttagtgtattcataagtgtcgtgtcggt 14223852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 20691306 - 20691372
Alignment:
Q  47 acactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||||  |  ||||||||||||||| ||||  ||||||||||||||||| ||| ||||||    
T  20691306 acactgacacgtagaaactgataataatttgagaaaatgacataattcagtgtaatcatatgtgtcg 20691372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 21211294 - 21211348
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    ||||||||||||| ||||  ||||| ||||||||||||||  |||||||||||||    
T  21211294 gataataatttgagaaaattacatagttcagtgtaattatgggtgtcgtgtcggt 21211348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 41319391 - 41319309
Alignment:
Q  38 tcagatacgacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    ||||| ||||||| |||||||| |  |  |||||||||||| ||||  |||||||||| ||||||| || |||||||||||||    
T  41319391 tcagacacgacacggacacgtcgacaccaataataatttgaaaaaatgacataattcaatgtaattgtatgtgtcgtgtcggt 41319309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 51512232 - 51512182
Alignment:
Q  70 ataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    |||||||||||||| ||||||||||| || ||| ||| |||||||||||||    
T  51512232 ataatttgataaaatcacataattcaatggaatcatatgtgtcgtgtcggt 51512182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 52369781 - 52369835
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    ||||||||||||| ||||  |||||||||| |||||| ||| |||||||||||||    
T  52369781 gataataatttgagaaaattacataattcaatgtaatcataggtgtcgtgtcggt 52369835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 1509547 - 1509592
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||| |||||||||| ||||||||    
T  1509547 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 1509592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 10954960 - 10955005
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||| | ||||||||    
T  10954960 taataatttgaaaaaatcacataattcagtgtaatcacaagtgtcg 10955005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 11251986 - 11252023
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattat 105  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  11251986 taataatttgagaaaatcacataattcagtgtaattat 11252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 11665952 - 11665997
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||||||||| |||| |||| |||||||||||| ||||||    
T  11665952 taataatttgataaaatcacacaatttagtgtaattatatgtgtcg 11665997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 21257037 - 21256992
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||||||| |||||| ||||||||    
T  21257037 taataatttgaaaaaatcacataattcagtataattacaagtgtcg 21256992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 25365468 - 25365521
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcgg 119  Q
    ||||||||||||| || |  ||||||||| ||||||| ||||||||||||||||    
T  25365468 gataataatttgagaatatgacataattcggtgtaatcataagtgtcgtgtcgg 25365521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 29508452 - 29508497
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| || ||||||||||||||||||| ||||||    
T  29508452 taataatttgaaaaaatcatataattcagtgtaattatatgtgtcg 29508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 34910325 - 34910370
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||| ||||    
T  34910325 taataatttgaaaaaatcacataattcagtgtaattacaagagtcg 34910370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 49651837 - 49651792
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||||| |||||||| ||||||||    
T  49651837 taataatttgaaaaaatcacataattcactgtaattacaagtgtcg 49651792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 51206404 - 51206359
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||||||||||| || ||||||||    
T  51206404 taataatttgaaaaaatcacataattcagtgtaaatacaagtgtcg 51206359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 55401083 - 55401128
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||| |||||||||| ||||||||    
T  55401083 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 55401128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 10268537 - 10268493
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| |||| ||||||||| |||||||||| |||||||    
T  10268537 taataatttgaaaaaatcacataatttagtgtaattacaagtgtc 10268493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 12083911 - 12083955
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    |||||| |||| ||||| ||||||||||||||||||| |||||||    
T  12083911 taataaattgagaaaactacataattcagtgtaattacaagtgtc 12083955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 14209121 - 14209165
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||| | |||| |||||||||||||||||||| |||||||    
T  14209121 taataattttaaaaaatcacataattcagtgtaattacaagtgtc 14209165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 14840342 - 14840302
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataag 108  Q
    ||||||||| | |||| ||||||||||||||||||||||||    
T  14840342 taataatttcagaaaatcacataattcagtgtaattataag 14840302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 20503474 - 20503518
Alignment:
Q  69 aataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||| ||||  ||||||||||||||||||| ||||||||    
T  20503474 aataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 20503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 32804591 - 32804547
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| |||| ||||||||| |||||||||||| |||||    
T  32804591 taataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 49505205 - 49505161
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| |||| ||||||||| |||||||||||| |||||    
T  49505205 taataatttgagaaaatcacataatttagtgtaattatatgtgtc 49505161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 17341715 - 17341671
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  17341715 taataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 113
Target Start/End: Complemental strand, 7265666 - 7265599
Alignment:
Q  46 gacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||||| |||  | | ||||||||||| |||| |||||||||||||||||||||| ||||||    
T  7265666 gacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 7265599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 2117084 - 2117134
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcg 118  Q
    ||||||||||| |||| ||||||||||| || |||||||||||||||||||    
T  2117084 taataatttgaaaaaatcacataattcaatgcaattataagtgtcgtgtcg 2117134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 17168536 - 17168462
Alignment:
Q  46 gacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    |||||||||||| |||  ||||||||||||||| ||||  | |||||| |||||||| ||| |||||||||||||    
T  17168536 gacactgacacgccaacactgataataatttgagaaaatgatataatttagtgtaataataggtgtcgtgtcggt 17168462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 34446571 - 34446625
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    ||||||||||||| ||||  ||||||||||||||||| ||| |||||||||||||    
T  34446571 gataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggt 34446625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 9025545 - 9025500
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||||    
T  9025545 taataatttgagaaaatcacataattcagtgtaattatatgtgtcg 9025500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 10770725 - 10770680
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  10770725 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 10770680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 16766705 - 16766750
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  16766705 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 16766750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 34595142 - 34595187
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  34595142 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 34595187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 19040360 - 19040404
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| |||| |||||||||||||||||||||| |||||    
T  19040360 taataatttgagaaaatcacataattcagtgtaattatatgtgtc 19040404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 31384928 - 31384972
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| |||| |||||||||||||||||||| |||||||    
T  31384928 taataatttgaaaaaatcacataattcagtgtaattacaagtgtc 31384972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 32511717 - 32511674
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    ||||||||| | |||| |||||||||||||||||||||||||||    
T  32511717 taataatttaagaaaatcacataattcagtgtaattataagtgt 32511674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 1532248 - 1532286
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattata 106  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  1532248 taataatttgataaaattacataattcagtgtaattata 1532286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 107
Target Start/End: Complemental strand, 16388283 - 16388245
Alignment:
Q  69 aataatttgataaaaccacataattcagtgtaattataa 107  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  16388283 aataatttgaaaaaatcacataattcagtgtaattataa 16388245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 1681766 - 1681811
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||| |||||||||||||||| ||||||||    
T  1681766 taataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 7086803 - 7086848
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||||    
T  7086803 taataatttgagaaaatcacataatttagtgtaattatatgtgtcg 7086848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 7569221 - 7569176
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    ||||||||||||| ||||  ||||||||||||||||||||| ||||    
T  7569221 gataataatttgagaaaattacataattcagtgtaattataggtgt 7569176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 7801207 - 7801162
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||| ||||||| ||||||||    
T  7801207 taataatttgaaaaaatcacataattcagcgtaattacaagtgtcg 7801162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 7938124 - 7938169
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| || |||||| |||||||||||||||||||    
T  7938124 taataatttgaaaaaatcatataatttagtgtaattataagtgtcg 7938169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 7977881 - 7977836
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| ||||  ||||||||||||||||||| ||||||||    
T  7977881 taataatttgaaaaaattacataattcagtgtaattacaagtgtcg 7977836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 9107421 - 9107376
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||| ||||||||||||||| ||||||||    
T  9107421 taataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcg 9107376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 9522899 - 9522944
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||| | |||| |||||||||||||||||||| ||||||||    
T  9522899 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcg 9522944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 9617442 - 9617487
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||||| |||||||||| ||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcg 9617487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 11591917 - 11591876
Alignment:
Q  72 aatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||| |||| |||||||||||||||||||||| ||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtgtcg 11591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 16833316 - 16833361
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||| ||||||||||||| ||||||||    
T  16833316 taataatttgaaaaaatcacatacttcagtgtaattacaagtgtcg 16833361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 26178732 - 26178687
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||||||||| ||||||||| |||||||| ||| ||||||    
T  26178732 taataatttgataaaatcacataatttagtgtaatcatatgtgtcg 26178687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 26562701 - 26562742
Alignment:
Q  72 aatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||| |||| |||||||||||||||||||||| ||||||    
T  26562701 aatttgagaaaatcacataattcagtgtaattatatgtgtcg 26562742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 28152107 - 28152151
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  28152107 taataatttga-aaaatcacataattcagtgtaattacaagtgtcg 28152151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 28715303 - 28715348
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| ||||  ||||||||||||||||||| ||||||||    
T  28715303 taataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 28715348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 30866195 - 30866150
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||||| |||||||||| ||||||    
T  30866195 taataatttgagaaaatcacataattcaatgtaattatatgtgtcg 30866150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 31579276 - 31579239
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattat 105  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaattat 31579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 31959167 - 31959212
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||| ||||||||||| ||||||||    
T  31959167 taataatttgaaaaaatcacataatgcagtgtaattacaagtgtcg 31959212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 32299279 - 32299328
Alignment:
Q  64 ctgataataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||||||| |||| ||||||||||| |||| ||||| ||||||    
T  32299279 ctgataataatttgagaaaatcacataattcaatgtagttatacgtgtcg 32299328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 5970159 - 5970123
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaatta 104  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  5970159 taataatttgaaaaaatcacataattcagtgtaatta 5970123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 9629392 - 9629436
Alignment:
Q  69 aataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||| |||| ||||||||||| |||||||||| ||||||    
T  9629392 aataatttgagaaaatcacataattcaatgtaattatatgtgtcg 9629436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 12696332 - 12696376
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| ||||  ||||||||||||||||||| |||||||    
T  12696332 taataatttgaaaaaattacataattcagtgtaattacaagtgtc 12696376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 44067501 - 44067576
Alignment:
Q  45 cgacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    ||||||||||||| | |  | ||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||    
T  44067501 cgacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggt 44067576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 11927137 - 11927092
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgtcg 11927092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 13009546 - 13009492
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    ||||||||||||| ||||| | |||||| |||||||| |||||||||||||||||    
T  13009546 gataataatttgagaaaacaatataatttagtgtaatcataagtgtcgtgtcggt 13009492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 4114278 - 4114229
Alignment:
Q  44 acgacactgacacgtcaatgctgataataatttgataaaaccacataatt 93  Q
    ||||||||||||||||||||| ||||||||||||| ||||  ||||||||    
T  4114278 acgacactgacacgtcaatgccgataataatttgagaaaatgacataatt 4114229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 4948660 - 4948705
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  4948660 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 4948705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 11944673 - 11944718
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||||    
T  11944673 taataatttgataaaatcacataactcagtgtaattatatgtgtcg 11944718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 15816180 - 15816135
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||| |||||||||||||||||||    
T  15816180 taataatttgaaaaaatcacataatttagtgtaattataagtgtcg 15816135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 20679446 - 20679401
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||| ||||||||||||||||||||||    
T  20679446 taataatttgagaaaatcacatagttcagtgtaattataagtgtcg 20679401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 25566849 - 25566894
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  25566849 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 25566894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 34897093 - 34897138
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||||    
T  34897093 taataatttgagaaaatcacataattcagtgtaattatatgtgtcg 34897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 3025559 - 3025603
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| |||| |||||||||||||||||||||| |||||    
T  3025559 taataatttgagaaaatcacataattcagtgtaattataggtgtc 3025603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 40332200 - 40332244
Alignment:
Q  69 aataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||| |||| |||||||||||||||||||| ||||||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaattacaagtgtcg 40332244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 41831991 - 41831943
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcgtgt 116  Q
    ||||||||||| |||| ||||||||||||||||| || |||||||||||    
T  41831991 taataatttgaaaaaatcacataattcagtgtaactacaagtgtcgtgt 41831943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 20873075 - 20873122
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||||| |||| ||||||||| |||||||||| ||||||||    
T  20873075 gataataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 20873122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 13844676 - 13844602
Alignment:
Q  39 cagatacgacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||| ||||||| |||||| | |  ||| ||||||||||| |||| ||||||||| |||||||||||| ||||||    
T  13844676 cagacacgacacggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcg 13844602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 14134707 - 14134745
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattata 106  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  14134707 taataatttgagaaaatcacataattcagtgtaattata 14134745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 30077460 - 30077394
Alignment:
Q  46 gacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||| |||||| ||| || | ||||||||||| || | |||||||||||||||||||| |||||||    
T  30077460 gacacggacacgccaacgcagctaataatttgaaaacatcacataattcagtgtaattacaagtgtc 30077394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 2572107 - 2572062
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||| |||||||||| ||||||||    
T  2572107 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 2572062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 3911117 - 3911166
Alignment:
Q  67 ataataatttgataaaaccacataattcagtgtaattataagtgtcgtgt 116  Q
    ||||| |||| |||||| |||||||||||||| ||| |||||||||||||    
T  3911117 ataatcatttaataaaatcacataattcagtgaaatcataagtgtcgtgt 3911166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 4786389 - 4786344
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||| | |||| |||||||||||||||||||||| ||||||    
T  4786389 taataatttaagaaaatcacataattcagtgtaattatatgtgtcg 4786344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 8342980 - 8343025
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||| |||||||||| ||||||||    
T  8342980 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 8343025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 22770968 - 22771013
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    ||||||||||||||||||| |||||||||| |||||| ||| ||||    
T  22770968 gataataatttgataaaacaacataattcaatgtaatcatatgtgt 22771013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 31236628 - 31236583
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||||| |||||||||| ||||||    
T  31236628 taataatttgagaaaatcacataattcaatgtaattatatgtgtcg 31236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 33405435 - 33405390
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||||    
T  33405435 taataatttgagaaaaacacataatttagtgtaattatatgtgtcg 33405390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 34222955 - 34223000
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||| |||||| ||||||||| |||||||||||| ||||||    
T  34222955 taataatttaataaaatcacataattaagtgtaattatatgtgtcg 34223000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 3508047 - 3508103
Alignment:
Q  55 acgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    ||||| |||||||||||||||||| ||||  |||||||||| |||||| ||| ||||    
T  3508047 acgtcgatgctgataataatttgagaaaataacataattcaatgtaatcatatgtgt 3508103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 8343324 - 8343368
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| |||| ||||||||| |||||||||| |||||||    
T  8343324 taataatttgaaaaaatcacataatttagtgtaattacaagtgtc 8343368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 13018267 - 13018323
Alignment:
Q  46 gacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaat 102  Q
    |||||| |||||||||| | | ||||||||||| |||| ||||||||| ||||||||    
T  13018267 gacactaacacgtcaataccgttaataatttgacaaaatcacataatttagtgtaat 13018323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 24362253 - 24362209
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| | || |||||||||||||||||||||| |||||    
T  24362253 taataatttgagagaatcacataattcagtgtaattatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 22794151 - 22794080
Alignment:
Q  46 gacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtc 117  Q
    ||||||||||||||||  | ||||||||||||| ||||  ||||||| ||||||||||||| ||||||||||    
T  22794151 gacactgacacgtcaacacggataataatttgaaaaaatgacataatacagtgtaattataggtgtcgtgtc 22794080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 17831638 - 17831536
Alignment:
Q  12 atgaagcacggatatagacacatatatcagatacgacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    |||||||||||||| ||||||| | | | ||||||||||||||||| | |  | | ||||||||||| |||| ||||| |||||||||||| ||| ||||    
T  17831638 atgaagcacggatacagacacagacaccggatacgacactgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgt 17831539  T
Q  112 cgt 114  Q
    |||    
T  17831538 cgt 17831536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 1486760 - 1486715
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||    
T  1486760 taataatttgaaaaaatcacataattcagtgtaattataagtgtcg 1486715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 3490465 - 3490392
Alignment:
Q  44 acgacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtc 117  Q
    |||||||||||||| | |  ||| ||||||||||| ||||| |||| |||||||||||||| ||||||||||||    
T  3490465 acgacactgacacgccgacactgctaataatttgagaaaactacattattcagtgtaattacaagtgtcgtgtc 3490392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 1864931 - 1864886
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgtcg 1864886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 9629951 - 9629906
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||||||||| || |||||||||||| |||||||||||||    
T  9629951 taataatttgataaaatcatataattcagtgtgattataagtgtcg 9629906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 9828052 - 9828097
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||||||||| ||||||||||||||||||| || ||||||    
T  9828052 taataatttgataaaatcacataattcagtgtaattttatgtgtcg 9828097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 17425146 - 17425101
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||    
T  17425146 gataataatttgataaaatcacataattcaatgtaattatatgtgt 17425101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 22881723 - 22881622
Alignment:
Q  12 atgaagcacggatatagacacatatatcagatacgacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    |||||||||||||||||||||  | | | || |||||||||||||| | |  |   ||||||||||| |||| ||||||||| |||||||||| ||||||    
T  22881723 atgaagcacggatatagacacggacaccggacacgacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgt 22881624  T
Q  112 cg 113  Q
    ||    
T  22881623 cg 22881622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 24577237 - 24577192
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  24577237 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 24577192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 31015051 - 31015096
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  31015051 taataatttgagaaaatcacataattcagtgtaattacaagtgtcg 31015096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 36878469 - 36878514
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||||    
T  36878469 taataatttgagaaaatcacataattcagtgtaattataggtgtcg 36878514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 40258984 - 40258939
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  40258984 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 40258939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 398816 - 398772
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| |||| |||||||||||||||||||||| |||||    
T  398816 taataatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 7918262 - 7918218
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| |||| |||||||||||||||||||||| |||||    
T  7918262 taataatttgagaaaatcacataattcagtgtaattatatgtgtc 7918218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 18337338 - 18337382
Alignment:
Q  69 aataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||| |||| |||||||||||||||||||| ||||||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 18337382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 113307 - 113350
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||    
T  113307 taataatttgaaaaaatcacataattcagtgtaattacaagtgt 113350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 12443511 - 12443460
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcgg 119  Q
    ||||||||||| |||| ||||||||||||||||||| || ||| ||||||||    
T  12443511 taataatttgagaaaatcacataattcagtgtaattgtatgtgacgtgtcgg 12443460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 119
Target Start/End: Complemental strand, 17705625 - 17705586
Alignment:
Q  80 aaaaccacataattcagtgtaattataagtgtcgtgtcgg 119  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  17705625 aaaatcacataattcagtgtaattatatgtgtcgtgtcgg 17705586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 113
Target Start/End: Original strand, 44482240 - 44482283
Alignment:
Q  70 ataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||| |||| |||||||||||||||||||||| ||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcg 44482283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 15323149 - 15323215
Alignment:
Q  46 gacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    |||||||||| ||| || | | ||||||||||| |||| ||||||||| ||||||||| ||||||||    
T  15323149 gacactgacatgtcgatacagttaataatttgaaaaaatcacataatttagtgtaattgtaagtgtc 15323215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 25361896 - 25361938
Alignment:
Q  70 ataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||| |||| |||||||||||||||||||||| |||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtc 25361938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 34298444 - 34298482
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattata 106  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  34298444 taataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 38078733 - 38078667
Alignment:
Q  47 acactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||||| |  | | ||||||||||| |||| ||||||||||| |||||||| ||||||||    
T  38078733 acactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcg 38078667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 40181879 - 40181917
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattata 106  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  40181879 taataatttgagaaaatcacataattcagtgtaattata 40181917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 47989504 - 47989550
Alignment:
Q  67 ataataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||| | |||| |||||||||||||||||||| ||||||||    
T  47989504 ataataatttaaaaaaatcacataattcagtgtaattacaagtgtcg 47989550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 1705043 - 1704998
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||| ||||||| ||||||||    
T  1705043 taataatttgaaaaaatcacataattcagggtaattacaagtgtcg 1704998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 5944303 - 5944336
Alignment:
Q  80 aaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||| |||||||||||||||||||||||||||||    
T  5944303 aaaatcacataattcagtgtaattataagtgtcg 5944336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 6427336 - 6427401
Alignment:
Q  46 gacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    |||||||||||| |||  | | ||||||||||| |||| ||||||||||| |||||||||| ||||    
T  6427336 gacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgt 6427401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 6612222 - 6612177
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| ||||  ||||||||||||||||||| ||||||||    
T  6612222 taataatttgaaaaaattacataattcagtgtaattacaagtgtcg 6612177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 18190159 - 18190114
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| ||||  ||||||||||||||||||| ||||||||    
T  18190159 taataatttgaaaaaattacataattcagtgtaattacaagtgtcg 18190114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 22515938 - 22515893
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||| |||||||||| ||||||||    
T  22515938 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 22515893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 23531851 - 23531790
Alignment:
Q  46 gacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataa 107  Q
    ||||| ||||| ||||| ||| ||||||||||| || | ||||||||||| |||||||||||    
T  23531851 gacaccgacacttcaatactgctaataatttgaaaatatcacataattcaatgtaattataa 23531790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 25098604 - 25098563
Alignment:
Q  70 ataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    ||||||||| |||| |||||||||||||||||||||| ||||    
T  25098604 ataatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 25272494 - 25272535
Alignment:
Q  72 aatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||| |||| ||||||||| |||||||||||||||||||    
T  25272494 aatttgagaaaatcacataatttagtgtaattataagtgtcg 25272535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 37598840 - 37598884
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||| ||||||||||||||||||||||||    
T  37598840 taataatttgaaaaaatcaca-aattcagtgtaattataagtgtcg 37598884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 39101234 - 39101181
Alignment:
Q  67 ataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    |||||||||||| ||||  |||||||| |||||||||||| ||||||| |||||    
T  39101234 ataataatttgagaaaataacataattaagtgtaattataggtgtcgtttcggt 39101181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 42359500 - 42359455
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||| ||||||||||||||| ||||||||    
T  42359500 taataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcg 42359455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 52903257 - 52903302
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||| |||||| || ||||||||||||||||||| ||||||    
T  52903257 taataatttaataaaatcatataattcagtgtaattatatgtgtcg 52903302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 351137 - 351085
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcg 118  Q
    |||||||||||||||||| ||||||||||| || ||| ||| || ||||||||    
T  351137 gataataatttgataaaatcacataattcaatggaatcatatgtatcgtgtcg 351085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 10233261 - 10233305
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    |||||| |||| |||| |||||||||||||||||||||| |||||    
T  10233261 taataaattgagaaaatcacataattcagtgtaattatatgtgtc 10233305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 19324572 - 19324608
Alignment:
Q  70 ataatttgataaaaccacataattcagtgtaattata 106  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  19324572 ataatttgagaaaatcacataattcagtgtaattata 19324608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 27471617 - 27471581
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaatta 104  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  27471617 taataatttgagaaaagcacataattcagtgtaatta 27471581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 35919315 - 35919283
Alignment:
Q  80 aaaaccacataattcagtgtaattataagtgtc 112  Q
    |||| ||||||||||||||||||||||||||||    
T  35919315 aaaatcacataattcagtgtaattataagtgtc 35919283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 49872845 - 49872897
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    |||| |||||| ||||| | ||||||||||||||||||| ||||||| |||||    
T  49872845 taatcatttgagaaaactatataattcagtgtaattatatgtgtcgtatcggt 49872897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 43249999 - 43250053
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    ||||||||||||| ||||  ||||||| |||||||||||||||||||||||||||    
T  43249999 gataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggt 43250053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 12278839 - 12278894
Alignment:
Q  64 ctgataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcgg 119  Q
    ||||||||||||| | ||||  ||||||||||||||||||||| ||||||||||||    
T  12278839 ctgataataatttaagaaaatgacataattcagtgtaattatatgtgtcgtgtcgg 12278894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 5938478 - 5938532
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    ||||||||||||||||||  |||||||||||| |||||||| |||| ||||||||    
T  5938478 gataataatttgataaaataacataattcagtataattataggtgttgtgtcggt 5938532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 15902829 - 15902875
Alignment:
Q  67 ataataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||||||||| ||||||||| |||||||||||| ||||||    
T  15902829 ataataatttgataaaatcacataatttagtgtaattatatgtgtcg 15902875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 11665491 - 11665446
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||    
T  11665491 taataatttgaaaaaatcacataattcagtctaattataagtgtcg 11665446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 19992009 - 19992054
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||| ||||||||||||||||||||||    
T  19992009 taataatttgagaaaatcacatatttcagtgtaattataagtgtcg 19992054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 24339650 - 24339695
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  24339650 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 24339695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 26033512 - 26033467
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  26033512 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 26033467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 25481910 - 25481953
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||    
T  25481910 taataatttgaaaaaatcacataattcagtgtaattacaagtgt 25481953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 4017847 - 4017797
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgt 116  Q
    ||||||||||||| ||||| | |||||| |||||||| |||||||||||||    
T  4017847 gataataatttgagaaaacgatataatttagtgtaatcataagtgtcgtgt 4017797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 16341500 - 16341542
Alignment:
Q  64 ctgataataatttgataaaaccacataattcagtgtaattata 106  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||    
T  16341500 ctgataataatttgagaaaatcacataattaagtgtaattata 16341542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 23128713 - 23128667
Alignment:
Q  67 ataataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||||| ||||||| ||||||||||||||| ||| ||||||    
T  23128713 ataataatttgagaaaaccatataattcagtgtaatcatatgtgtcg 23128667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 1401033 - 1401074
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagt 109  Q
    ||||||||||| |||  |||||||||||||||||||||||||    
T  1401033 taataatttgagaaactcacataattcagtgtaattataagt 1401074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 2424622 - 2424659
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattat 105  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  2424622 taataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 3991332 - 3991377
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||||||| |||||| ||||||||    
T  3991332 taataatttgaaaaaatcacataattcagtataattacaagtgtcg 3991377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 5409887 - 5409842
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||| ||||| ||||||||    
T  5409887 taataatttgaaaaaatcacataattcagtgcaattacaagtgtcg 5409842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 7438714 - 7438759
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||||| |||||||| ||||||||    
T  7438714 taataatttgaaaaaatcacataattcaatgtaattacaagtgtcg 7438759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 9408385 - 9408340
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||| |||||||||| ||||||||    
T  9408385 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 9408340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 20549799 - 20549844
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||| |||||||||||||||||| ||||||    
T  20549799 taataatttgagaaaatcacgtaattcagtgtaattatatgtgtcg 20549844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 21880160 - 21880205
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| ||||  ||||||||||||||||||| ||||||||    
T  21880160 taataatttgagaaaattacataattcagtgtaattacaagtgtcg 21880205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 23751906 - 23751959
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcgg 119  Q
    ||||||||||||||||||  | |||||| |||||||| ||| ||||||||||||    
T  23751906 gataataatttgataaaatgatataatttagtgtaatcataggtgtcgtgtcgg 23751959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 26329433 - 26329388
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||| ||||||||||||||||| ||||||    
T  26329433 taataatttgagaaaaacacacaattcagtgtaattatatgtgtcg 26329388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 27945049 - 27945094
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| ||||  ||||||||||||||||||| ||||||||    
T  27945049 taataatttgagaaaattacataattcagtgtaattacaagtgtcg 27945094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 29787420 - 29787383
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattat 105  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  29787420 taataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 42720994 - 42720897
Alignment:
Q  15 aagcacggatatagacacatatatcagatacgacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    |||||||||||  |||||| | |||||| | |||||||||||||  |  | | ||||||||||| |||| ||||||||| | |||||||||| |||||    
T  42720994 aagcacggatacggacacagacatcagacatgacactgacacgttgacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtc 42720897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 7328757 - 7328697
Alignment:
Q  53 acacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||| || ||| ||||||||||| ||||  |||||||| |||||||||||| ||||||    
T  7328757 acacgtcgatactgctaataatttgagaaaataacataatttagtgtaattatatgtgtcg 7328697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 10042945 - 10042989
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    |||||||||||||||  ||||||||| || |||||||||||||||    
T  10042945 taataatttgataaattcacataatttagcgtaattataagtgtc 10042989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 17851439 - 17851483
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||| | |||| |||||||||||||||||||||| |||||    
T  17851439 taataattttagaaaatcacataattcagtgtaattatatgtgtc 17851483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 19930991 - 19930947
Alignment:
Q  69 aataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||||||||  |||||||||| |||||||||| ||||||    
T  19930991 aataatttgataaaatgacataattcaatgtaattatatgtgtcg 19930947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 22602756 - 22602716
Alignment:
Q  73 atttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||| |||| |||||||||||||||||||||| ||||||    
T  22602756 atttgagaaaatcacataattcagtgtaattatatgtgtcg 22602716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 22868050 - 22868094
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||| ||| |||| |||||||||||||||||||||| |||||    
T  22868050 taataatatgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 23849512 - 23849464
Alignment:
Q  65 tgataataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||||| | |||| ||||||||||||| |||||||| ||||||    
T  23849512 tgataataatttaagaaaaacacataattcagtataattatatgtgtcg 23849464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 32308128 - 32308172
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| |||| ||||||||||||||||||| || |||||    
T  32308128 taataatttgagaaaatcacataattcagtgtaattgtatgtgtc 32308172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 35861972 - 35862016
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| |||| ||||||||||| ||||||| ||||||||    
T  35861972 taataatttgaaaaaatcacataattcaatgtaattgtaagtgtc 35862016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 24343513 - 24343567
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    ||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||    
T  24343513 gataataatttgagaaaattacataattcagtgtaattataggtgtcgtgtcggt 24343567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 14126162 - 14126113
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcgtgtc 117  Q
    |||||||||||||||  |||||||||||||||||||||||||||| ||||    
T  14126162 taataatttgataaagtcacataattcagtgtaattataagtgtcatgtc 14126113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 54580074 - 54580029
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||    
T  54580074 taataatttgaaaaaatcacataattcagtgtaattataagtgtcg 54580029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 12077815 - 12077869
Alignment:
Q  47 acactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaa 101  Q
    |||||||||||||||| ||| ||||||||||| |||| ||||||||||| |||||    
T  12077815 acactgacacgtcaatactgttaataatttgagaaaatcacataattcaatgtaa 12077869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 8423769 - 8423724
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||||||||||||||||| |||||    
T  8423769 taataatttgagaaaatcacataattcagtgtaattataaatgtcg 8423724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 8820395 - 8820468
Alignment:
Q  47 acactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    |||||||||||||||    |||||||||||||||||| ||||||||||| || | | ||| |||||||||||||    
T  8820395 acactgacacgtcaacatcgataataatttgataaaatcacataattcaatggagtcatatgtgtcgtgtcggt 8820468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 22440651 - 22440602
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcgtgtc 117  Q
    ||||||||||| |||| |||||||||||||||||||||| ||| ||||||    
T  22440651 taataatttgagaaaatcacataattcagtgtaattatatgtgacgtgtc 22440602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 29205452 - 29205497
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  29205452 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 29205497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 28964299 - 28964255
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| |||| |||||||||||||||||||| |||||||    
T  28964299 taataatttgaaaaaatcacataattcagtgtaattacaagtgtc 28964255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 11596403 - 11596360
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||    
T  11596403 taataatttgaaaaaatcacataattcagtgtaattacaagtgt 11596360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 20521922 - 20521850
Alignment:
Q  46 gacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    |||||||||||| | || | |||||||||||||||||| ||||||||||| || ||| ||  |||||||||||||    
T  20521922 gacactgacacgccgataccgataataatttgataaaatcacataattcaatgaaatcat--gtgtcgtgtcggt 20521850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 109
Target Start/End: Original strand, 30838196 - 30838259
Alignment:
Q  46 gacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagt 109  Q
    |||||||| ||||| || ||| ||||||||||||||||  | |||||| |||||||||||||||    
T  30838196 gacactgatacgtcgatactgctaataatttgataaaattatataatttagtgtaattataagt 30838259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 36635332 - 36635375
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||    
T  36635332 taataatttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 903930 - 903968
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattata 106  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  903930 taataatttgagaaaatcacataattcagtgtaattata 903968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 12895326 - 12895280
Alignment:
Q  67 ataataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||||| |||| |||||||||  ||||||||||||||||||    
T  12895326 ataataatttgaaaaaatcacataattttgtgtaattataagtgtcg 12895280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 19230362 - 19230312
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgt 116  Q
    ||||||||||||| ||||  |||||||||| |||||||||| |||||||||    
T  19230362 gataataatttgagaaaataacataattcaatgtaattataggtgtcgtgt 19230312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 20743331 - 20743277
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    ||||||||||||| ||||  ||||||||||||||||| ||| |||| ||||||||    
T  20743331 gataataatttgagaaaatgacataattcagtgtaatcataggtgttgtgtcggt 20743277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 5775409 - 5775364
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||||    
T  5775409 taataatttgagaaaatcacataattaagtgtaattatatgtgtcg 5775364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 6485662 - 6485617
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||| |||||||||| ||||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 6485617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 12797388 - 12797344
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  12797388 taataatttga-aaaatcacataattcagtgtaattacaagtgtcg 12797344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 21945511 - 21945556
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| ||||  ||||||||||||||||||| ||||||||    
T  21945511 taataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 21945556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 23293037 - 23292992
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||||||| |||||| ||||||||    
T  23293037 taataatttgaaaaaatcacataattcagtataattacaagtgtcg 23292992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 30982929 - 30982884
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||| |||||| |||| |||||| ||||||||||||||||||||||    
T  30982929 taatgatttgagaaaatcacatatttcagtgtaattataagtgtcg 30982884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 31243600 - 31243547
Alignment:
Q  67 ataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    |||||||||||| ||||  ||||||||||||||||| ||| ||||| |||||||    
T  31243600 ataataatttgagaaaatgacataattcagtgtaatcataggtgtcatgtcggt 31243547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 32910557 - 32910614
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggtatc 123  Q
    ||||||||||||| ||||  ||||||||||||||||||||  ||||  ||||||||||    
T  32910557 gataataatttgagaaaatgacataattcagtgtaattatgggtgttatgtcggtatc 32910614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 35158036 - 35157991
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||  |||| ||||||||| |||||||||||||||||||    
T  35158036 taataatttggaaaaatcacataatttagtgtaattataagtgtcg 35157991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 40613458 - 40613503
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||| ||||| |||| |||||||||||||||||||||| ||||||    
T  40613458 taatattttgagaaaatcacataattcagtgtaattatatgtgtcg 40613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 3947817 - 3947773
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| |||| | |||||||||||||||||| |||||||    
T  3947817 taataatttgaaaaaatcgcataattcagtgtaattacaagtgtc 3947773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 20633471 - 20633542
Alignment:
Q  46 gacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    |||||||||||||| |  | | ||||||||||| |||||   |||||||| |||||||| |||||||||||||||    
T  20633471 gacactgacacgtcgacaccgctaataatttgaaaaaac---ataattcaatgtaattacaagtgtcgtgtcggt 20633542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 105
Target Start/End: Complemental strand, 21873421 - 21873385
Alignment:
Q  69 aataatttgataaaaccacataattcagtgtaattat 105  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  21873421 aataatttgataaaatcacataattcagtgaaattat 21873385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 105
Target Start/End: Complemental strand, 21929282 - 21929246
Alignment:
Q  69 aataatttgataaaaccacataattcagtgtaattat 105  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  21929282 aataatttgataaaatcacataattcagtgaaattat 21929246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 40481645 - 40481696
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||  |||||||    
T  40481645 taataatttga-aaaatcacataattcagtgtaattacaagtgttatgtcggt 40481696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 53189 - 53233
Alignment:
Q  69 aataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||| |||| |||||||||||||||||||||||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcg 53233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 28412336 - 28412395
Alignment:
Q  46 gacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattat 105  Q
    |||||| |||||||||  | | |||||||||||||||| |||||||||||||||||||||    
T  28412336 gacactaacacgtcaacaccgttaataatttgataaaatcacataattcagtgtaattat 28412395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 10535812 - 10535762
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgt 116  Q
    ||||||||||||| ||||  ||||||||||||||||| |||||||||||||    
T  10535812 gataataatttgagaaaatgacataattcagtgtaatcataagtgtcgtgt 10535762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 12668474 - 12668429
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||    
T  12668474 taataatttgaaaaaatgacataattcagtgtaattataagtgtcg 12668429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 30404901 - 30404856
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  30404901 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 30404856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 30717581 - 30717536
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  30717581 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 30717536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 34691856 - 34691811
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||||||||| || ||||||||||||||||||| ||||||    
T  34691856 taataatttgataaaatcatataattcagtgtaattatatgtgtcg 34691811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 34714268 - 34714223
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||||||||| || ||||||||||||||||||| ||||||    
T  34714268 taataatttgataaaatcatataattcagtgtaattatatgtgtcg 34714223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 18420504 - 18420440
Alignment:
Q  49 actgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||| |||  ||| ||||||||||| |||| ||||||||||| || ||||||||||||||    
T  18420504 actgacacgccaacactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcg 18420440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 18622614 - 18622657
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||    
T  18622614 taataatttaataaaatcacataattcagtgtaattatacgtgt 18622657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 21616770 - 21616813
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||    
T  21616770 taataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 11308053 - 11308003
Alignment:
Q  70 ataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    ||||||||| ||||  ||||||||||||||||| ||| |||||||||||||    
T  11308053 ataatttgaaaaaatgacataattcagtgtaatcataggtgtcgtgtcggt 11308003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 19573984 - 19574038
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    ||||||||||| | ||||  ||||||||||||||||||||| ||| |||||||||    
T  19573984 gataataatttaagaaaataacataattcagtgtaattataggtggcgtgtcggt 19574038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 21782890 - 21782832
Alignment:
Q  47 acactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattat 105  Q
    ||||||||||| | |  ||| ||||||||||| |||| |||||||||||||||||||||    
T  21782890 acactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 28677917 - 28677955
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattata 106  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  28677917 taataatttgaaaaaatcacataattcagtgtaattata 28677955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 2438770 - 2438725
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||| | |||| |||||||||||||||||||| ||||||||    
T  2438770 taataatttcaaaaaatcacataattcagtgtaattacaagtgtcg 2438725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 5367200 - 5367245
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||||  ||| |||||||||||||||||||||| ||||||    
T  5367200 taataatttgaggaaatcacataattcagtgtaattatatgtgtcg 5367245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 17776594 - 17776639
Alignment:
Q  67 ataataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    |||||||||| | |||||||||||| |||||||||||||| |||||    
T  17776594 ataataatttaagaaaaccacataagtcagtgtaattatatgtgtc 17776639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 23718034 - 23718079
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||  |||||||||||||||||||||| ||||||    
T  23718034 taataatttgagaaagtcacataattcagtgtaattatatgtgtcg 23718079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 24105706 - 24105751
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||  |||||||||||||||||||||| ||||||    
T  24105706 taataatttgagaaagtcacataattcagtgtaattatatgtgtcg 24105751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 25544488 - 25544541
Alignment:
Q  67 ataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    |||||||||||| ||||  | ||||||||||||||| ||| |||||||||||||    
T  25544488 ataataatttgagaaaatgatataattcagtgtaatcataggtgtcgtgtcggt 25544541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 35449500 - 35449565
Alignment:
Q  47 acactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||| | |||  ||| ||||||||||| |||| |||| ||||||||||||||||| |||||    
T  35449500 acactgacaagccaacactgttaataatttgagaaaatcacagaattcagtgtaattatatgtgtc 35449565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 36756395 - 36756350
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||||||  |||  ||||||||||||||||||||||||||||    
T  36756395 taataatttgaagaaataacataattcagtgtaattataagtgtcg 36756350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 37411295 - 37411250
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||||||||| |||||| ||||||    
T  37411295 taataatttgagaaaatcacataattcagtgtgattatatgtgtcg 37411250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 42832327 - 42832282
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| ||||  ||||| ||||||||||||||||||||||    
T  42832327 taataatttgagaaaattacatatttcagtgtaattataagtgtcg 42832282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 44860328 - 44860373
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| | |||||||||||||||||||| ||||||    
T  44860328 taataatttgagaaaatcgcataattcagtgtaattatatgtgtcg 44860373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 21374750 - 21374706
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| ||||  ||||||||||||||||||| |||||||    
T  21374750 taataatttgaaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 27286343 - 27286299
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    |||||||||||||| | ||||||||| |||||||||||| |||||    
T  27286343 taataatttgataagatcacataattaagtgtaattataggtgtc 27286299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 31808085 - 31808129
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||| | |||| |||||||||||||||||||||| |||||    
T  31808085 taataatttaacaaaatcacataattcagtgtaattatatgtgtc 31808129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 39323272 - 39323316
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| ||||  ||||||||||||||||||| |||||||    
T  39323272 taataatttgacaaaattacataattcagtgtaattacaagtgtc 39323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 70286 - 70331
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||    
T  70286 taataatttgaaaaaataacataattcagtgtaattataagtgtcg 70331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 20180 - 20224
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| |||| |||||||||||||||||||| |||||||    
T  20180 taataatttgaaaaaatcacataattcagtgtaattacaagtgtc 20224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 51819 - 51862
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgt 111  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||    
T  51819 taataatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 8126 - 8052
Alignment:
Q  46 gacactgacacgtcaatgctgataataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    ||||| |||||||| || | ||||||||||||| ||||  ||||||||||||||||  ||| || ||||||||||    
T  8126 gacaccgacacgtcgatacggataataatttgagaaaatgacataattcagtgtaaacataggtatcgtgtcggt 8052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 14538 - 14580
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtg 110  Q
    ||||||||||| |||| |||||||||||||||||||| |||||    
T  14538 taataatttgaaaaaatcacataattcagtgtaattacaagtg 14580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 225321 - 225271
Alignment:
Q  66 gataataatttgataaaaccacataattcagtgtaattataagtgtcgtgt 116  Q
    ||||||||||||| ||||  ||||||| || ||||||||||||||||||||    
T  225321 gataataatttgagaaaatgacataatacaatgtaattataagtgtcgtgt 225271  T

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Target: scaffold0652 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 513 - 468
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||| ||||||||||||||| ||||||||    
T  513 taataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcg 468  T

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Target: scaffold0236 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 25819 - 25774
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||||||| || |||| ||||||||| |||||||||||||||||||    
T  25819 taataattagagaaaatcacataatttagtgtaattataagtgtcg 25774  T

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Target: scaffold0171 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 23440 - 23473
Alignment:
Q  80 aaaaccacataattcagtgtaattataagtgtcg 113  Q
    |||| |||||||||||||||||||||||||||||    
T  23440 aaaatcacataattcagtgtaattataagtgtcg 23473  T

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Target: scaffold0171; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 23531 - 23563
Alignment:
Q  80 aaaaccacataattcagtgtaattataagtgtc 112  Q
    |||| ||||||||||||||||||||||||||||    
T  23531 aaaatcacataattcagtgtaattataagtgtc 23563  T

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Target: scaffold0123 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 44572 - 44531
Alignment:
Q  72 aatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||| |||| |||||||||||||||||||||| ||||||    
T  44572 aatttgagaaaatcacataattcagtgtaattatatgtgtcg 44531  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 9798 - 9753
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||| |||||||||||||||||| ||||||    
T  9798 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 9753  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 46690 - 46735
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||||||||||||| || |||||    
T  46690 taataatttgaaaaaatcacataattcagtgtaattacaaatgtcg 46735  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 130490 - 130535
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||| ||||| |||| |||||||||||||||||||| ||||||||    
T  130490 taatagtttgaaaaaatcacataattcagtgtaattacaagtgtcg 130535  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 135363 - 135318
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| |||||||||| ||||||||||| ||||||    
T  135363 taataatttgagaaaatcacataattctgtgtaattatatgtgtcg 135318  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 17800 - 17755
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcg 113  Q
    ||||||||||| |||| ||||||||| |||||||||| ||||||||    
T  17800 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 17755  T

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Target: scaffold0246 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 19584 - 19635
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||  |||||||    
T  19584 taataatttga-aaaatcacataattcagtgtaattacaagtgttatgtcggt 19635  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 3900 - 3856
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||| | |||| |||||||||||||||||||| |||||||    
T  3900 taataatttaaaaaaatcacataattcagtgtaattacaagtgtc 3856  T

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Target: scaffold0066 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 33414 - 33363
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtcgtgtcggt 120  Q
    ||||||||||| ||||  ||||||||||||||||||| || ||||||||||||    
T  33414 taataatttgaaaaaataacataattcagtgtaattacaa-tgtcgtgtcggt 33363  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 92815 - 92859
Alignment:
Q  68 taataatttgataaaaccacataattcagtgtaattataagtgtc 112  Q
    ||||||||||| ||||  ||||||||||||||||||| |||||||    
T  92815 taataatttgagaaaattacataattcagtgtaattacaagtgtc 92859  T

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