View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15938_high_3 (Length: 611)
Name: NF15938_high_3
Description: NF15938
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15938_high_3 |
 | |
|
| [»] scaffold0019 (1 HSPs) |
| | |
|
| [»] scaffold0038 (5 HSPs) |
| | |
|
| [»] scaffold0349 (1 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 417; Significance: 0; HSPs: 43)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 417; E-Value: 0
Query Start/End: Original strand, 35 - 594
Target Start/End: Original strand, 28185883 - 28186443
Alignment:
| Q |
35 |
tgtatttatacaactattattaataaattgatgtggttgtgaatttgtgatgcatttactcaaacttatttgattgtgtaggaatggttatgaacacgag |
134 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| |||| |||||||||| |||||||||||| |
|
|
| T |
28185883 |
tgtatttatacaactattattaataaattgatgtggctgtgaatttgtgatgcacttaatcaaacttattttattgggtaggaatggctatgaacacgag |
28185982 |
T |
|
| Q |
135 |
tttattgagaagatagtcaaatatgtatctaacaagatcaatcatgttcctttatatgttgctgattaccctgttggtattgagtctagggttcttaaag |
234 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||| |
|
|
| T |
28185983 |
tttattgagaagatagtcaaatatgtatctaacaagatcaatcatgttcctttatatgttgctgatttccctgttggtatcgagtctagggttctaaaag |
28186082 |
T |
|
| Q |
235 |
taaattcacttatggattttggatctaatggcgaagttcagatgctagggatctatgggcctagaggaaagggaaagacgacacttgcaagagcagttta |
334 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
28186083 |
taaattcacttatggattttggatctaatggtgaagttcagatgctagggatctatgggcctggaggaatgggaaagacgacacttgcaagagcagttta |
28186182 |
T |
|
| Q |
335 |
taattccatagctgatcaatttgatgatttgtgttttcttcatgatgtaaggaaaagttcagctaaatatggtttggagcatctgcagggaaagctcctt |
434 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28186183 |
taattccctagctgatcaatttgatgatttgtgttttcttcacgatgtaaggggaaattcagctaaatatggtttggagcatctgcagggaaagctcctt |
28186282 |
T |
|
| Q |
435 |
tctaaattagttgaactggacattaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctag |
534 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||| |||||||||| || ||||||| | |
|
|
| T |
28186283 |
tctaaattagtcaaactggacattaagttaggagatgtctacgagggaattccaatcatagagaaaaggcttcaccaaaagaaggttttgttgattctcg |
28186382 |
T |
|
| Q |
535 |
atgatgttcacgaaatgaag-caattgcatgttttggctggaggacttgattggtttggtc |
594 |
Q |
| |
|
|||||||||||||| | ||| || ||| | ||||||||||||||| || ||||||||||| |
|
|
| T |
28186383 |
atgatgttcacgaactaaagccagttggaagttttggctggaggatttcgttggtttggtc |
28186443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 35 - 594
Target Start/End: Original strand, 28227443 - 28228001
Alignment:
| Q |
35 |
tgtatttatacaactattattaataaattgatgtggttgtgaatttgtgatgcatttactcaaacttatttgattgtgtaggaatggttatgaacacgag |
134 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||| |||| |
|
|
| T |
28227443 |
tgtatttatacaactattattaataaattgatatgattgtgaatttgtgatgcatttactcaaa-ttatttgattgggtaggaatggctatgaatgcgag |
28227541 |
T |
|
| Q |
135 |
tttattgagaagatagtcaaatatgtatctaacaagatcaatcatgttcctttatatgttgctgattaccctgttggtattgagtctagggttcttaaag |
234 |
Q |
| |
|
||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||| |||||||| || |||| |
|
|
| T |
28227542 |
tttatcgagaagatagtcaaatatatatctaacaagatcaatcatgttcctttacatgttgccgattaccctgttggtgttgaatctagggtcctaaaag |
28227641 |
T |
|
| Q |
235 |
taaattcacttatggattttggatctaatggcgaagttcagatgctagggatctatgggcctagaggaaagggaaagacgacacttgcaagagcagttta |
334 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||| |||||| |||||||||| ||| | | |||| ||||||||| ||||||||||| |||||||| |
|
|
| T |
28227642 |
taaattcacttatggatgttggatctaatggtgaagcacagatgatagggatctacgggaatcgtggaatgggaaagacaacacttgcaagggcagttta |
28227741 |
T |
|
| Q |
335 |
taattccatagctgatcaatttgatgatttgtgttttcttcatgatgtaaggaaaagttcagctaaatatggtttggagcatctgcagggaaagctcctt |
434 |
Q |
| |
|
||||| ||||| ||||||||||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||| |||||||| ||| |||| ||||| |
|
|
| T |
28227742 |
taattttatagccgatcaatttgatggtttgtgttttcttcacgatgtaagggaaaattcagctaaatatggtttagagcatctataggtaaagatcctt |
28227841 |
T |
|
| Q |
435 |
tctaaattagttgaactggacattaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctag |
534 |
Q |
| |
|
|| |||||||||||| |||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||| ||||||| | |
|
|
| T |
28227842 |
tccaaattagttgaattggaagttaagttaggagatgtcaacgagggaattccagtcttaaagcaaaggcttcaccgaaagaaagttctattgattctcg |
28227941 |
T |
|
| Q |
535 |
atgatgttcacgaaatgaagcaattgcatgttttggctggaggacttgattggtttggtc |
594 |
Q |
| |
|
||||||||||| || | |||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
28227942 |
atgatgttcacaaactaaagcaattgcgggttttggctggaggacttgattggtttggtc |
28228001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 77 - 595
Target Start/End: Complemental strand, 28297390 - 28296872
Alignment:
| Q |
77 |
atttgtgatgcatttactcaaacttatttgattgtgtaggaatggttatgaacacgagtttattgagaagatagtcaaatatgtatctaacaagatcaat |
176 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
28297390 |
atttgtgatgcatttactcaaacttatttgattggataggaatggatatgaatatgagtttattgagaagatagtcaaatacgtatccagcaagatcaat |
28297291 |
T |
|
| Q |
177 |
catgttcctttatatgttgctgattaccctgttggtattgagtctagggttcttaaagtaaattcacttatggattttggatctaatggcgaagttcaga |
276 |
Q |
| |
|
| |||||||||||||||||| |||||||| |||||| | |||||||||| || |||||||||||| || ||||| | |||||||||| |||||||||| |
|
|
| T |
28297290 |
cgtgttcctttatatgttgccgattaccccgttggtctccagtctagggtcctaaaagtaaattcatttctggatctcagatctaatggtgaagttcaga |
28297191 |
T |
|
| Q |
277 |
tgctagggatctatgggcctagaggaaagggaaagacgacacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttcttca |
376 |
Q |
| |
|
||||||||||||||||| || |||| | ||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
28297190 |
tgctagggatctatgggactggagggatgggaaagacaacacttgccagagcagtttataattccatagccgatcaatttgatggtttgtgttttcttca |
28297091 |
T |
|
| Q |
377 |
tgatgtaaggaaaagttcagctaaatatggtttggagcatctgcagggaaagctcctttctaaattagttgaactggacattaagttaggagatgtcaac |
476 |
Q |
| |
|
|||||||| ||| |||||||||||||||||| |||||||| |||| |||||||||||| |||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
28297090 |
caatgtaagggaaaattcagctaaatatggtttagagcatctacaggaaaagctcctttccaaattagttgaattggacgttaagttaggagatgtcaac |
28296991 |
T |
|
| Q |
477 |
gagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctggag |
576 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||| ||||||||||||| |||||||||||| |
|
|
| T |
28296990 |
gagggaattccaatcataaagcaaaggcttcaccgaaagaaggttttgttgattctagatgatgttcatgaactgaagcaattgcaagttttggctggac |
28296891 |
T |
|
| Q |
577 |
gacttgattggtttggtct |
595 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
28296890 |
gacttgattggtttggtct |
28296872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 77 - 595
Target Start/End: Original strand, 28514683 - 28515201
Alignment:
| Q |
77 |
atttgtgatgcatttactcaaacttatttgattgtgtaggaatggttatgaacacgagtttattgagaagatagtcaaatatgtatctaacaagatcaat |
176 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
28514683 |
atttgtgatgcatttactcaaacttatttgattggataggaatggatatgaatatgagtttattgagaagatagtcaaatacgtatccagcaagatcaat |
28514782 |
T |
|
| Q |
177 |
catgttcctttatatgttgctgattaccctgttggtattgagtctagggttcttaaagtaaattcacttatggattttggatctaatggcgaagttcaga |
276 |
Q |
| |
|
| |||||||||||||||||| |||||||| |||||| | |||||||||| || |||||||||||| || ||||| | |||||||||| |||||||||| |
|
|
| T |
28514783 |
cgtgttcctttatatgttgccgattaccccgttggtctccagtctagggtcctaaaagtaaattcatttctggatctcagatctaatggtgaagttcaga |
28514882 |
T |
|
| Q |
277 |
tgctagggatctatgggcctagaggaaagggaaagacgacacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttcttca |
376 |
Q |
| |
|
||||||||||||||||| || |||| | ||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
28514883 |
tgctagggatctatgggactggagggatgggaaagacaacacttgccagagcagtttataattccatagccgatcaatttgatggtttgtgttttcttca |
28514982 |
T |
|
| Q |
377 |
tgatgtaaggaaaagttcagctaaatatggtttggagcatctgcagggaaagctcctttctaaattagttgaactggacattaagttaggagatgtcaac |
476 |
Q |
| |
|
|||||||| ||| |||||||||||||||||| |||||||| |||| |||||||||||| |||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
28514983 |
caatgtaagggaaaattcagctaaatatggtttagagcatctacaggaaaagctcctttccaaattagttgaattggacgttaagttaggagatgtcaac |
28515082 |
T |
|
| Q |
477 |
gagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctggag |
576 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||| ||||||||||||| |||||||||||| |
|
|
| T |
28515083 |
gagggaattccaatcataaagcaaaggcttcaccgaaagaaggttttgttgattctagatgatgttcatgaactgaagcaattgcaagttttggctggac |
28515182 |
T |
|
| Q |
577 |
gacttgattggtttggtct |
595 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
28515183 |
gacttgattggtttggtct |
28515201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 74 - 594
Target Start/End: Original strand, 28235096 - 28235614
Alignment:
| Q |
74 |
tgaatttgtgatgcatttactcaaacttatttgattgtgtaggaatggttatgaacacgagtttattgagaagatagtcaaatatgtatctaacaagatc |
173 |
Q |
| |
|
||||||||||||||||| || | ||||||||| ||||||||||||| |||||| || ||| |||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
28235096 |
tgaatttgtgatgcattaaccaagacttatttg--tgtgtaggaatggatatgaatacaagtatattaagaagatagtcaaatatgtatcaaacaagatc |
28235193 |
T |
|
| Q |
174 |
aatcatgttcctttatatgttgctgattaccctgttggtattgagtctagggttcttaaagtaaattcacttatggattttggatctaatggcgaagttc |
273 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| | |||||||||| || ||||||| |||| | ||||| ||||||||||||| ||||||| |
|
|
| T |
28235194 |
aatcatgttcctttatatgttgccgattaccctgttggtctcaagtctagggtcctaaaagtaacttcatgtgtggatgttggatctaatggtgaagttc |
28235293 |
T |
|
| Q |
274 |
agatgctagggatctatgggcctagaggaaagggaaagacgacacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttct |
373 |
Q |
| |
|
|||||||||||||||||||| || | |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
28235294 |
agatgctagggatctatgggactggtggaattggaaagacaacacttgcaagagcagtttataattccatagctgatcaatttgatggtttgtgttttct |
28235393 |
T |
|
| Q |
374 |
tcatgatgtaaggaaaagttcagctaaatatggtttggagcatctgcagggaaagctcctttctaaattagttgaactggacattaagttaggagatgtc |
473 |
Q |
| |
|
||| || |||||| ||| |||| ||||||||||||| |||||||| ||||||||||||||||| |||||||||||| ||||| || |||||||||||||| |
|
|
| T |
28235394 |
tcacgacgtaagggaaaattcatctaaatatggtttagagcatctacagggaaagctcctttccaaattagttgaattggacgttgagttaggagatgtc |
28235493 |
T |
|
| Q |
474 |
aacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctg |
573 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||| |||||||| | |
|
|
| T |
28235494 |
aatgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgttgattctagatgatgttcacgaactaaagcaattgcaggttttggcgg |
28235593 |
T |
|
| Q |
574 |
gaggacttgattggtttggtc |
594 |
Q |
| |
|
||| | ||||||||||||||| |
|
|
| T |
28235594 |
gagaaattgattggtttggtc |
28235614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 40 - 594
Target Start/End: Original strand, 28181612 - 28182167
Alignment:
| Q |
40 |
ttatacaactattattaataaattgatgtggttgtgaatttgtgatgcattta-ctcaaacttatttgattgtgtaggaatggttatgaacacgagttta |
138 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| | |||| ||||| |||| |||||||||||||||||| |||||||||| |||||| | ||||||| |
|
|
| T |
28181612 |
ttatacaactattattaa-aaattgatgtggttgagcatttatgatgtattttgctcaaacttatttgattgggtaggaatggatatgaatatgagttta |
28181710 |
T |
|
| Q |
139 |
ttgagaagatagtcaaatatgtatctaacaagatcaatcatgttcctttatatgttgctgattaccctgttggtattgagtctagggttcttaaagtaaa |
238 |
Q |
| |
|
| || |||||||||||||| || || || ||||||||| |||||||||||||||||| |||||| ||||||| | ||||||||||| || |||||||| |
|
|
| T |
28181711 |
tcgaaaagatagtcaaatacgtttccaaaaagatcaattgtgttcctttatatgttgccgattactatgttggtctcgagtctagggtcctaaaagtaaa |
28181810 |
T |
|
| Q |
239 |
ttcacttatggattttggatctaatggcgaagttcagatgctagggatctatgggcctagaggaaagggaaagacgacacttgcaagagcagtttataat |
338 |
Q |
| |
|
|||| || ||||| | ||||||||||| ||||||||||||||||||||||||||| || |||||| |||||||||||| ||||||||||||||||||||| |
|
|
| T |
28181811 |
ttcatttctggatgtcggatctaatggtgaagttcagatgctagggatctatgggactggaggaatgggaaagacgacgcttgcaagagcagtttataat |
28181910 |
T |
|
| Q |
339 |
tccatagctgatcaatttgatgatttgtgttttcttcatgatgtaaggaaaagttcagctaaatatggtttggagcatctgcagggaaagctcctttcta |
438 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| | || ||||| || |||||||||||||||||| |||||||| |||| ||| |||||||| | |
|
|
| T |
28181911 |
tccatagctgatcaatttgatggtttgtgttttcttaacgacataagggcaaattcagctaaatatggtttagagcatctacaggaaaatctcctttcca |
28182010 |
T |
|
| Q |
439 |
aattagttgaactggacattaagttaggagatgtcaacgagggaattccaatcat-aaagcaaaggcttcaccgaaagaaggttctgctgattctagatg |
537 |
Q |
| |
|
|||||| |||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
28182011 |
aattagctgaattggacgttaagttaggagatgtcaacgagggaactccaatcataaaagcaaaggcttcaccgaaagaaggttctattgattctagatg |
28182110 |
T |
|
| Q |
538 |
atgttcacgaaatgaagcaattgcatgttttggctggaggacttgattggtttggtc |
594 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
28182111 |
atgttcacgaactgaagcaattgcaggttttggctggaggaattgattggtttggtc |
28182167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 35 - 594
Target Start/End: Original strand, 28325968 - 28326527
Alignment:
| Q |
35 |
tgtatttatacaactattattaataaattgatgtggttgtgaatttgtgatgcatttactcaaacttatttgattgtgtaggaatggttatgaacacgag |
134 |
Q |
| |
|
|||||| ||||||| |||| || | |||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||| ||||| |
|
|
| T |
28325968 |
tgtattcatacaacagttatcaacacattgatgttattgtgaatttgcgatgcatttactcaaacttatttgattgggtaggaatggctatgaatacgag |
28326067 |
T |
|
| Q |
135 |
tttattgagaagatagtcaaatatgtatctaacaagatcaatcatgttcctttatatgttgctgattaccctgttggtattgagtctagggttcttaaag |
234 |
Q |
| |
|
||||||||||||||||||||||| |||| | ||||||| | |||||||||||||||||| ||||||||||| ||| | ||||||||| | || ||| |
|
|
| T |
28326068 |
tttattgagaagatagtcaaatacgtattcaggaagatcagttgtgttcctttatatgttgcggattaccctgtaggtctcgagtctaggatcctagaag |
28326167 |
T |
|
| Q |
235 |
taaattcacttatggattttggatctaatggcgaagttcagatgctagggatctatgggcctagaggaaagggaaagacgacacttgcaagagcagttta |
334 |
Q |
| |
|
||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| || | |||| ||||||||| |||||||||||||||||||| |
|
|
| T |
28326168 |
taaattcacttatagatgttggatctaatggtaaagttcagatgctagggatctatgggactggtggaatgggaaagacaacacttgcaagagcagttta |
28326267 |
T |
|
| Q |
335 |
taattccatagctgatcaatttgatgatttgtgttttcttcatgatgtaaggaaaagttcagctaaatatggtttggagcatctgcagggaaagctcctt |
434 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||||||| | || |||| || |||||||||||||||||| |||||||| |||| |||||||||| |
|
|
| T |
28326268 |
taattccatagccgatcaatttgatggtttgtgttttcttaacgaaataagtgcaaattcagctaaatatggtttagagcatctacaggaaaagctcctt |
28326367 |
T |
|
| Q |
435 |
tctaaattagttgaactggacattaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctag |
534 |
Q |
| |
|
|| |||||||||||| || || ||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
28326368 |
tccaaattagttgaattgtacgttaagttaggagatgtcaatgatggagttccaatcataaagcaaaggcttcaccgaaagaaggttctgttgattctcg |
28326467 |
T |
|
| Q |
535 |
atgatgttcacgaaatgaagcaattgcatgttttggctggaggacttgattggtttggtc |
594 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
28326468 |
atgatgttcacgaactgaagcaattgcaggttttggctggaggacttgattggttcggtc |
28326527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 297; E-Value: 1e-166
Query Start/End: Original strand, 82 - 594
Target Start/End: Original strand, 28243332 - 28243844
Alignment:
| Q |
82 |
tgatgcatttactcaaacttatttgattgtgtaggaatggttatgaacacgagtttattgagaagatagtcaaatatgtatctaacaagatcaatcatgt |
181 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||| |||||| |||| | ||| ||||||| ||| |
|
|
| T |
28243332 |
tgatgcatttactcaaacttatttgattgggtaggaatggatatgaatacgagtttattgagaagatagtaaaatatttatccagcaaaatcaatcgtgt |
28243431 |
T |
|
| Q |
182 |
tcctttatatgttgctgattaccctgttggtattgagtctagggttcttaaagtaaattcacttatggattttggatctaatggcgaagttcagatgcta |
281 |
Q |
| |
|
|||| |||||||||||||||||||||||||| | ||||||||||| || ||||||||| | || | ||| | ||||||| ||| | |||||| |||||| |
|
|
| T |
28243432 |
tcctctatatgttgctgattaccctgttggtctcgagtctagggtcctaaaagtaaataaatttcttgatgtcggatctactggtgtagttcatatgcta |
28243531 |
T |
|
| Q |
282 |
gggatctatgggcctagaggaaagggaaagacgacacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttcttcatgatg |
381 |
Q |
| |
|
|||||||||||| || | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||| |
|
|
| T |
28243532 |
gggatctatgggactggtggaatgggaaagacaacacttgcaagagcagtttataattccatagctgatcaatttgattgtttatgttttcttcacgatg |
28243631 |
T |
|
| Q |
382 |
taaggaaaagttcagctaaatatggtttggagcatctgcagggaaagctcctttctaaattagttgaactggacattaagttaggagatgtcaacgaggg |
481 |
Q |
| |
|
||||| ||| |||| ||||||||||||| |||||||| |||| |||||||||||| |||||||||||| |||||||| |||| |||||| |||||||||| |
|
|
| T |
28243632 |
taagggaaaattcaactaaatatggtttagagcatctacaggaaaagctcctttccaaattagttgaattggacattgagttgggagatatcaacgaggg |
28243731 |
T |
|
| Q |
482 |
aattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctggaggactt |
581 |
Q |
| |
|
||||||||| |||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||| ||||||||||||| ||||| |||||||||||| |
|
|
| T |
28243732 |
aattccaataataaagaaaaggcttcaccgaaacaaggttctgctaattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggactt |
28243831 |
T |
|
| Q |
582 |
gattggtttggtc |
594 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
28243832 |
gattggttcggtc |
28243844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 232 - 594
Target Start/End: Original strand, 28503801 - 28504163
Alignment:
| Q |
232 |
aagtaaattcacttatggattttggatctaatggcgaagttcagatgctagggatctatgggcctagaggaaagggaaagacgacacttgcaagagcagt |
331 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| || | |||| ||||||||| ||||||||||||||||| |
|
|
| T |
28503801 |
aagtaaattcacttatagatgttggatctaatggtaaagttcagatgctagggatctatgggactggtggaatgggaaagacaacacttgcaagagcagt |
28503900 |
T |
|
| Q |
332 |
ttataattccatagctgatcaatttgatgatttgtgttttcttcatgatgtaaggaaaagttcagctaaatatggtttggagcatctgcagggaaagctc |
431 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||||||||||||| | || |||| || |||||||||||||||||| |||||||| |||| ||||||| |
|
|
| T |
28503901 |
ttataattccatagccgatcaatttgatggtttgtgttttcttaacgaaataagtgcaaattcagctaaatatggtttagagcatctacaggaaaagctc |
28504000 |
T |
|
| Q |
432 |
ctttctaaattagttgaactggacattaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattc |
531 |
Q |
| |
|
||||| |||||||||||| || || ||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
28504001 |
ctttccaaattagttgaattgtacgttaagttaggagatgtcaatgatggagttccaatcataaagcaaaggcttcaccgaaagaaggttctgttgattc |
28504100 |
T |
|
| Q |
532 |
tagatgatgttcacgaaatgaagcaattgcatgttttggctggaggacttgattggtttggtc |
594 |
Q |
| |
|
| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
28504101 |
tcgatgatgttcacgaactgaagcaattgcaggttttggctggaggacttgattggttcggtc |
28504163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 363 - 594
Target Start/End: Original strand, 29826804 - 29827035
Alignment:
| Q |
363 |
ttgtgttttcttcatgatgtaaggaaaagttcagctaaatatggtttggagcatctgcagggaaagctcctttctaaattagttgaactggacattaagt |
462 |
Q |
| |
|
||||||||||||||||| | || |||||||||||||| |||| || || ||||| || ||||| ||||| ||| ||||||| |||||| |||| |
|
|
| T |
29826804 |
ttgtgttttcttcatgacttgagagaaagttcagctaaacatggcttagaacatctccaacagaagcttctttccaaaacagttgaattggacactaagc |
29826903 |
T |
|
| Q |
463 |
taggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagcaattgca |
562 |
Q |
| |
|
|||||||||| ||||| ||||||||||| |||||||||||||| |||||||| || || ||||||| || || ||| || | |||| ||||||||| |
|
|
| T |
29826904 |
taggagatgttaacgaaggaattccaataataaagcaaaggctaggacgaaagaaagtacttttgattcttgacgacgttgacaacatgaggcaattgca |
29827003 |
T |
|
| Q |
563 |
tgttttggctggaggacttgattggtttggtc |
594 |
Q |
| |
|
||| |||| |||||||||||||||||||||| |
|
|
| T |
29827004 |
agttatggcgggaggacttgattggtttggtc |
29827035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 454 - 594
Target Start/End: Original strand, 26884979 - 26885119
Alignment:
| Q |
454 |
acattaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaa |
553 |
Q |
| |
|
||||||||||||||||||| | |||||||||||| |||||||| |||| || || |||||||| |||| ||||||| ||||||||| || ||||| | |
|
|
| T |
26884979 |
acattaagttaggagatgttagtgagggaattccactcataaaggaaagactacatagaaagaagattcttttgattcttgatgatgttgacaaaatgga |
26885078 |
T |
|
| Q |
554 |
gcaattgcatgttttggctggaggacttgattggtttggtc |
594 |
Q |
| |
|
||| | | | ||||||||||||||||||||||||||||| |
|
|
| T |
26885079 |
gcagctagaggctttggctggaggacttgattggtttggtc |
26885119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 315 - 501
Target Start/End: Complemental strand, 29843399 - 29843213
Alignment:
| Q |
315 |
acacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttcttcatgatgtaaggaaaagttcagctaaatatggtttggagc |
414 |
Q |
| |
|
|||||||| ||||| ||||||||| || |||||| ||||||| ||||||||||||||| || | || |||||||||||||| |||| || |||| |
|
|
| T |
29843399 |
acacttgctcgagcaatttataatttgattgctgataaatttgaatgtttgtgttttcttcacgacgggagagaaagttcagctaaacatggcttagagc |
29843300 |
T |
|
| Q |
415 |
atctgcagggaaagctcctttctaaattagttgaactggacattaagttaggagatgtcaacgagggaattccaatcataaagcaaa |
501 |
Q |
| |
|
|||| || | ||||| ||||| ||| |||||| ||||||||||| |||||||||| || || ||||||||||| |||||||||| |
|
|
| T |
29843299 |
atctccaagagaagcttctttccaaaacagttgatttggacattaagctaggagatgttaatgaaggaattccaataataaagcaaa |
29843213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 315 - 589
Target Start/End: Original strand, 31285329 - 31285603
Alignment:
| Q |
315 |
acacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttcttcatgatgtaaggaaaagttcagctaaatatggtttggagc |
414 |
Q |
| |
|
||||||||||||||| | ||||||| || | |||||||||||| | || ||||||||||||||||| || | | |||||||||| || ||| | | |
|
|
| T |
31285329 |
acacttgcaagagcaatctataattttattggtgatcaatttgacggattatgttttcttcatgatgtgagagagaattcagctaaaaataacttgaaac |
31285428 |
T |
|
| Q |
415 |
atctgcagggaaagctcctttctaaattagttgaactggacattaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaa |
514 |
Q |
| |
|
|||| || | |||||||||| ||| | ||| | |||| |||||||||| |||| | ||||||||||||||||| ||| ||||||| |||| |
|
|
| T |
31285429 |
atctccaagagaagctccttttgaaaacaattggattggaaattaagttagaccatgttagtgagggaattccaatcattaaggaaaggctatgtagaaa |
31285528 |
T |
|
| Q |
515 |
gaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctggaggacttgattggtt |
589 |
Q |
| |
|
|||| |||| ||||||| ||||||||| || | ||||| ||| |||||| |||||||||||||||||||||||| |
|
|
| T |
31285529 |
gaagattcttttgattctcgatgatgttgacaatatgaatcaactgcatgctttggctggaggacttgattggtt |
31285603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 88 - 532
Target Start/End: Complemental strand, 28098082 - 28097638
Alignment:
| Q |
88 |
atttactcaaacttatttgattgtgtaggaatggttatgaacacgagtttattgagaagatagtcaaatatgtatctaacaagatcaatcatgttccttt |
187 |
Q |
| |
|
|||||||||||||||| | |||| |||||||| |||||| |||||||||| | | ||||||||||||||||| ||||| | |||||||| | ||| |
|
|
| T |
28098082 |
atttactcaaacttatcttattggccaggaatggatatgaattcgagtttattcgggaaatagtcaaatatgtatccaacaaattgaatcatgtcctttt |
28097983 |
T |
|
| Q |
188 |
atatgttgctgattaccctgttggtattgagtctagggttcttaaagtaaattcacttatggattttggatctaatggcgaagttcagatgctagggatc |
287 |
Q |
| |
|
| |||||| ||||||||| ||||| | | | | ||| | |||||||| |||||| | | |||||||||||| |||| ||||||| |||||| |
|
|
| T |
28097982 |
acatgttgttgattaccccgttggcctacaacatcgagttttaaaagtaaactcacttctaaaagttggatctaatgataaagtcaagatgcttgggatc |
28097883 |
T |
|
| Q |
288 |
tatgggcctagaggaaagggaaagacgacacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttcttcatgatgtaagga |
387 |
Q |
| |
|
||||| || |||| | || ||||| |||||||||| ||| |||||||||| ||| |||| ||||||||| | | ||||| ||||| |||| || |
|
|
| T |
28097882 |
tatggaccaggagggataggtaagacaacacttgcaaaagcggtttataatttcattgctggtcaatttgaatgtgtctgtttccttcacaatgtgagag |
28097783 |
T |
|
| Q |
388 |
aaagttcagctaaatatggtttggagcatctgcagggaaagctcctttctaaattagttgaactggacattaagttaggagatgtcaacgagggaattcc |
487 |
Q |
| |
|
||| |||||| ||| |||| || |||||||| || | | | ||||| || | |||| | ||||||||||||||| |||| | ||||||||||| |
|
|
| T |
28097782 |
aaaattcagcaaaacatggcttagagcatctccaaaaagatttgctttccaagattgttggattggacattaagttagcagatactagtgagggaattcc |
28097683 |
T |
|
| Q |
488 |
aatcataaagcaaaggcttcaccgaaagaaggttctgctgattct |
532 |
Q |
| |
|
||||||||| |||||||| || | |||||||||||| ||||||| |
|
|
| T |
28097682 |
aatcataaaacaaaggctacaacaaaagaaggttctattgattct |
28097638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 492 - 589
Target Start/End: Complemental strand, 27610355 - 27610258
Alignment:
| Q |
492 |
ataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctggaggacttgattggtt |
589 |
Q |
| |
|
|||||| ||||||| || ||||||||||||| ||||||| ||||||||| || | ||||||||| | |||| |||||||||||||| ||||||||| |
|
|
| T |
27610355 |
ataaaggaaaggctacatagaaagaaggttcttttgattcttgatgatgttgacaatatgaagcaactacatgctttggctggaggacctgattggtt |
27610258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 492 - 589
Target Start/End: Complemental strand, 27717734 - 27717637
Alignment:
| Q |
492 |
ataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctggaggacttgattggtt |
589 |
Q |
| |
|
|||||| ||||||| || ||||||||||||| ||||||| ||||||||| || | ||||||||| | |||| |||||||||||||| ||||||||| |
|
|
| T |
27717734 |
ataaaggaaaggctacatagaaagaaggttcttttgattcttgatgatgttgacaatatgaagcaactacatgctttggctggaggacctgattggtt |
27717637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 456 - 594
Target Start/End: Complemental strand, 27426883 - 27426745
Alignment:
| Q |
456 |
attaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagc |
555 |
Q |
| |
|
|||||||||| |||||||| |||||||| ||||||||||| ||||| | |||||||| |||| ||||||| ||||| ||| || | ||||||| |
|
|
| T |
27426883 |
attaagttagcagatgtcagtgagggaatctcaatcataaaggaaaggttgtgtagaaagaagattcttttgattctcgatgacgttgacaatatgaagc |
27426784 |
T |
|
| Q |
556 |
aattgcatgttttggctggaggacttgattggtttggtc |
594 |
Q |
| |
|
|| || ||| ||||||||||||| |||||||||| |||| |
|
|
| T |
27426783 |
aactgaatgctttggctggaggagttgattggttcggtc |
27426745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 511 - 589
Target Start/End: Original strand, 27679916 - 27679994
Alignment:
| Q |
511 |
gaaagaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctggaggacttgattggtt |
589 |
Q |
| |
|
|||||||| |||| ||||||| ||||||||| || | |||||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
27679916 |
gaaagaagattcttttgattctcgatgatgttgacaatttgaagcaactgcatgctttggctggaggacttgattggtt |
27679994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 26849290 - 26849378
Alignment:
| Q |
123 |
tatgaacacgagtttattgagaagatagtcaaatatgtatctaacaagatcaatcatgttcctttatatgttgctgattaccctgttgg |
211 |
Q |
| |
|
||||||||| | ||||||| ||| ||||| || |||| || ||||||||||| ||||||||||| ||||||||||||||| |||||| |
|
|
| T |
26849290 |
tatgaacaccattttattgggaaaatagttaaggatgtctccaacaagatcaaccatgttcctttgcatgttgctgattaccttgttgg |
26849378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 315 - 382
Target Start/End: Complemental strand, 27705816 - 27705749
Alignment:
| Q |
315 |
acacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttcttcatgatgt |
382 |
Q |
| |
|
||||||||||||||| ||||||||| | |||||||||||||| | ||| ||||||||||||||||| |
|
|
| T |
27705816 |
acacttgcaagagcaatttataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgt |
27705749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 592
Target Start/End: Original strand, 26803427 - 26803493
Alignment:
| Q |
526 |
tgattctagatgatgttcacgaaatgaagcaattgcatgttttggctggaggacttgattggtttgg |
592 |
Q |
| |
|
||||||| ||||||||| |||| ||| ||||| | |||| |||||||||||||| |||||||||||| |
|
|
| T |
26803427 |
tgattctcgatgatgttgacgatatggagcaactacatgctttggctggaggacctgattggtttgg |
26803493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 589
Target Start/End: Original strand, 26656876 - 26657009
Alignment:
| Q |
456 |
attaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagc |
555 |
Q |
| |
|
||||||||||||||||| | ||||||||||||||||||||| |||| || |||||||| |||| ||||||| ||||||||| || || || ||| |
|
|
| T |
26656876 |
attaagttaggagatgttagtgagggaattccaatcataaaggaaagactatctagaaagaagattcttttgattctcgatgatgttgacaaactggagc |
26656975 |
T |
|
| Q |
556 |
aattgcatgttttggctggaggacttgattggtt |
589 |
Q |
| |
|
| | | | |||||| ||||||||||||||||| |
|
|
| T |
26656976 |
agctagaggctttggcaggaggacttgattggtt |
26657009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 589
Target Start/End: Original strand, 26762847 - 26762980
Alignment:
| Q |
456 |
attaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagc |
555 |
Q |
| |
|
||||||||||||||||| | ||||||||||||||||||||| |||| || |||||||| |||| ||||||| ||||||||| || || || ||| |
|
|
| T |
26762847 |
attaagttaggagatgttagtgagggaattccaatcataaaggaaagactatctagaaagaagattcttttgattctcgatgatgttgacaaactggagc |
26762946 |
T |
|
| Q |
556 |
aattgcatgttttggctggaggacttgattggtt |
589 |
Q |
| |
|
| | | | |||||| ||||||||||||||||| |
|
|
| T |
26762947 |
agctagaggctttggcaggaggacttgattggtt |
26762980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 315 - 576
Target Start/End: Original strand, 28140305 - 28140566
Alignment:
| Q |
315 |
acacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttcttcatgatgtaaggaaaagttcagctaaatatggtttggagc |
414 |
Q |
| |
|
||||||||| |||| ||||||||| || || ||||||||||| |||||||||||||||| |||| || ||| |||||||||| |||| || || |
|
|
| T |
28140305 |
acacttgcacaagcaatttataattttattgccgatcaatttgaatgtttgtgttttcttcataatgtgagagaaatttcagctaaacatggcttagaag |
28140404 |
T |
|
| Q |
415 |
atctgcagggaaagctcctttctaaattagttgaactggacattaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaa |
514 |
Q |
| |
|
|||| || | ||| |||||||||||| ||||| || | ||||||| ||| |||| | || ||||| ||||| |||||| ||||||| | | ||| |
|
|
| T |
28140405 |
atctccaagaaaaactcctttctaaaacagttggtttgagcgttaagtttggacatgtaagtgaaggaataccaataataaaggaaaggctacgactaaa |
28140504 |
T |
|
| Q |
515 |
gaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctggag |
576 |
Q |
| |
|
||||||||| ||||||| ||||| ||| | ||| | || || ||| | ||||||||||||| |
|
|
| T |
28140505 |
gaaggttcttttgattctcgatgacgttgatgaactaaaacagttgaaggttttggctggag |
28140566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 480 - 589
Target Start/End: Original strand, 28240289 - 28240398
Alignment:
| Q |
480 |
ggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctggaggac |
579 |
Q |
| |
|
|||||||| ||||||||||||| || |||| ||||| ||||| ||||||||||| || | | ||| |||||||| |||| | |||||||||||| | |
|
|
| T |
28240289 |
ggaattcctatcataaagcaaatcctacaccataagaatgttcttttgattctagataatatggatgaactgaagcaactgcagggtttggctggagggc |
28240388 |
T |
|
| Q |
580 |
ttgattggtt |
589 |
Q |
| |
|
|||||||||| |
|
|
| T |
28240389 |
ttgattggtt |
28240398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 31288895 - 31288972
Alignment:
| Q |
135 |
tttattgagaagatagtcaaatatgtatctaacaagatcaatcatgttcctttatatgttgctgattaccctgttggt |
212 |
Q |
| |
|
|||||||| || ||||| | | |||| || |||||||| || |||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
31288895 |
tttattgaaaaaatagttacagatgtctccaacaagattaaccatgttcctttacatgttgctgattaccttgttggt |
31288972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 26623861 - 26623937
Alignment:
| Q |
135 |
tttattgagaagatagtcaaatatgtatctaacaagatcaatcatgttcctttatatgttgctgattaccctgttgg |
211 |
Q |
| |
|
|||||||| |||||||||||||| | || ||||||||||||| ||| || ||| |||||||| | ||||||||||| |
|
|
| T |
26623861 |
tttattgaaaagatagtcaaatacatctccaacaagatcaatcgtgtgcccttacatgttgctaaataccctgttgg |
26623937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 26729838 - 26729914
Alignment:
| Q |
135 |
tttattgagaagatagtcaaatatgtatctaacaagatcaatcatgttcctttatatgttgctgattaccctgttgg |
211 |
Q |
| |
|
|||||||| |||||||||||||| | || ||||||||||||| ||| || ||| |||||||| | ||||||||||| |
|
|
| T |
26729838 |
tttattgaaaagatagtcaaatacatctccaacaagatcaatcgtgtgcccttacatgttgctaaataccctgttgg |
26729914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 382
Target Start/End: Original strand, 26056692 - 26056759
Alignment:
| Q |
315 |
acacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttcttcatgatgt |
382 |
Q |
| |
|
|||||||||| |||||||| |||||| || |||||||||||||| | | | |||||||||||| |||| |
|
|
| T |
26056692 |
acacttgcaaaagcagtttttaattctattgctgatcaatttgaaggtgtatgttttcttcataatgt |
26056759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 382
Target Start/End: Original strand, 26076662 - 26076729
Alignment:
| Q |
315 |
acacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttcttcatgatgt |
382 |
Q |
| |
|
|||||||||| |||||||| |||||| || |||||||||||||| | | | |||||||||||| |||| |
|
|
| T |
26076662 |
acacttgcaaaagcagtttttaattctattgctgatcaatttgaaggtgtatgttttcttcataatgt |
26076729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 569
Target Start/End: Original strand, 26950656 - 26950767
Alignment:
| Q |
458 |
taagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagcaa |
557 |
Q |
| |
|
|||||| ||| |||| || || ||||||||||||||||| | |||||| | | ||||| ||| || ||||||| ||||||||| || |||| |||||| |
|
|
| T |
26950656 |
taagtttggacatgttaatgaaggaattccaatcataaaacgaaggctatatcagaagaaagttttgttgattctcgatgatgttgacaaaataaagcaa |
26950755 |
T |
|
| Q |
558 |
ttgcatgttttg |
569 |
Q |
| |
|
||||| |||||| |
|
|
| T |
26950756 |
ttgcaggttttg |
26950767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 26959746 - 26959793
Alignment:
| Q |
165 |
aacaagatcaatcatgttcctttatatgttgctgattaccctgttggt |
212 |
Q |
| |
|
|||||||| || |||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
26959746 |
aacaagattaaccatgttcctttacatgttgctgattaccttgttggt |
26959793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 594
Target Start/End: Complemental strand, 27337395 - 27337228
Alignment:
| Q |
427 |
agctcctttctaaattagttgaactggacattaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgct |
526 |
Q |
| |
|
|||||||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||||||||||| ||| ||||||| | |||||| |||| | |
|
|
| T |
27337395 |
agctcctttcaaaaacagttcaactgaacattaagttaagagatgtttctgagggaattccaatcattaaggaaaggctatgtaggaagaagattctttt |
27337296 |
T |
|
| Q |
527 |
gattctagatgatgttcacgaaatgaagcaattgcatgttttggctggaggacttgattggtttggtc |
594 |
Q |
| |
|
|||||| ||||||||| || || || | || | | | |||||||||||||||||||||||| |||| |
|
|
| T |
27337295 |
gattctcgatgatgttgaccaactggatcagctagaggctttggctggaggacttgattggttcggtc |
27337228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 594
Target Start/End: Complemental strand, 27398135 - 27397968
Alignment:
| Q |
427 |
agctcctttctaaattagttgaactggacattaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgct |
526 |
Q |
| |
|
|||||||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||||||||||| ||| ||||||| | |||||| |||| | |
|
|
| T |
27398135 |
agctcctttcaaaaacagttcaactgaacattaagttaagagatgtttctgagggaattccaatcattaaggaaaggctatgtaggaagaagattctttt |
27398036 |
T |
|
| Q |
527 |
gattctagatgatgttcacgaaatgaagcaattgcatgttttggctggaggacttgattggtttggtc |
594 |
Q |
| |
|
|||||| ||||||||| || || || | || | | | |||||||||||||||||||||||| |||| |
|
|
| T |
27398035 |
gattctcgatgatgttgaccaactggatcagctagaggctttggctggaggacttgattggttcggtc |
27397968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 542
Target Start/End: Complemental strand, 27530577 - 27530486
Alignment:
| Q |
451 |
tggacattaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgtt |
542 |
Q |
| |
|
|||||||||||||||||| ||| | |||||||||||||||| ||||||||||| |||||||| |||| ||||||| ||||||||| |
|
|
| T |
27530577 |
tggacattaagttaggaggtgttagtcagggaattccaatcattaagcaaaggctatgtagaaagaagattcttttgattcttgatgatgtt |
27530486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 382
Target Start/End: Original strand, 26803217 - 26803283
Alignment:
| Q |
316 |
cacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttcttcatgatgt |
382 |
Q |
| |
|
|||||||||||||| | ||||||| | |||||||||||||| | ||| ||||||||||||||||| |
|
|
| T |
26803217 |
cacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgt |
26803283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 27530713 - 27530655
Alignment:
| Q |
315 |
acacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttct |
373 |
Q |
| |
|
|||||||||| |||| ||||||||| ||| |||||||||||||| | ||| |||||||| |
|
|
| T |
27530713 |
acacttgcaaaagcaatttataatttcattgctgatcaatttgaagttttatgttttct |
27530655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 594
Target Start/End: Complemental strand, 29477300 - 29477198
Alignment:
| Q |
492 |
ataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctggaggacttgattggtttg |
591 |
Q |
| |
|
|||||||| ||||| |||||||||| ||||| || || ||||||||||| || | | ||||| || | | |||||||||||||||||||||||||| |
|
|
| T |
29477300 |
ataaagcacaggctctaccgaaagaaagttcttctcatcctagatgatgtggacagactagagcaaatggaggctttggctggaggacttgattggtttg |
29477201 |
T |
|
| Q |
592 |
gtc |
594 |
Q |
| |
|
||| |
|
|
| T |
29477200 |
gtc |
29477198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 25483637 - 25483694
Alignment:
| Q |
123 |
tatgaacacgagtttattgagaagatagtcaaatatgtatctaacaagatcaatcatg |
180 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||| | || ||||| |||||||||| |
|
|
| T |
25483637 |
tatgaacacaagtttattgagaagatagtccaatacatctccaacaatatcaatcatg |
25483694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 26975572 - 26975617
Alignment:
| Q |
166 |
acaagatcaatcatgttcctttatatgttgctgattaccctgttgg |
211 |
Q |
| |
|
|||||||||| || ||||||||| ||||||||||||||| |||||| |
|
|
| T |
26975572 |
acaagatcaaccacgttcctttacatgttgctgattaccttgttgg |
26975617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 25539121 - 25539209
Alignment:
| Q |
123 |
tatgaacacgagtttattgagaagatagtcaaatatgtatctaacaagatcaatcatgttcctttatatgttgctgattaccctgttgg |
211 |
Q |
| |
|
|||||| || |||||||||||||||||||| || | | || ||||| |||||||||||| ||||||||| || | ||||||||||| |
|
|
| T |
25539121 |
tatgaatacaagtttattgagaagatagtcgaagacatctccaacaatatcaatcatgtttttttatatgtggccaaataccctgttgg |
25539209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 298 - 358
Target Start/End: Original strand, 26849465 - 26849525
Alignment:
| Q |
298 |
gaggaaagggaaagacgacacttgcaagagcagtttataattccatagctgatcaatttga |
358 |
Q |
| |
|
|||||| |||||| || |||||||| ||||||||||||||| || |||||||||||||| |
|
|
| T |
26849465 |
gaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttga |
26849525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 315 - 383
Target Start/End: Original strand, 26937799 - 26937867
Alignment:
| Q |
315 |
acacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttcttcatgatgta |
383 |
Q |
| |
|
||||||||| ||||| ||||||||| || | |||||||||||| |||||||||||||||| ||||| |
|
|
| T |
26937799 |
acacttgcacgagcaatttataatttgattggtgatcaatttgaaagtttgtgttttcttcataatgta |
26937867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 377; Significance: 0; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 35 - 594
Target Start/End: Complemental strand, 57987 - 57427
Alignment:
| Q |
35 |
tgtatttatacaactattattaataaattgatgtggttgtgaatttgtgatgcatttactcaaacttatttgatt-gtgtaggaatggttatgaacacga |
133 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||| ||| | |||||||||| |||||| ||| |
|
|
| T |
57987 |
tgtatttatacaactattattaataaattgacgcggttgtgaatttatgatgcatttactcaaacttatttcatttgggtaggaatggatatgaatgcga |
57888 |
T |
|
| Q |
134 |
gtttattgagaagatagtcaaatatgtatctaacaagatcaatcatgttcctttatatgttgctgattaccctgttggtattgagtctagggttcttaaa |
233 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| || ||| |
|
|
| T |
57887 |
gtttattgagaagatagtcaaatatgtatctaacaagatcaatcatgttcctttatatgttgccgattaccctgttggtatcgaatctagggtcctaaaa |
57788 |
T |
|
| Q |
234 |
gtaaattcacttatggattttggatctaatggcgaagttcagatgctagggatctatgggcctagaggaaagggaaagacgacacttgcaagagcagttt |
333 |
Q |
| |
|
|||||||||||| ||||| || |||||||||| ||||||||||||||||||||||| || | |||||| ||||||||| |||||||| |||||||||| |
|
|
| T |
57787 |
gtaaattcacttctggatgttagatctaatggtgaagttcagatgctagggatctacggaattggaggaatgggaaagacaacacttgctagagcagttt |
57688 |
T |
|
| Q |
334 |
ataattccatagctgatcaatttgatgatttgtgttttcttcatgatgtaaggaaaagttcagctaaatatggtttggagcatctgcagggaaagctcct |
433 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| || |||||| ||| |||||||||||||||||| ||||||||||||||||| || || |
|
|
| T |
57687 |
ttaattccatagccgatcaatttgatgatttgtgttttcttcacgacgtaagggaaaattcagctaaatatggtttagagcatctgcagggaaaacttct |
57588 |
T |
|
| Q |
434 |
ttctaaattagttgaactggacattaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattcta |
533 |
Q |
| |
|
||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
57587 |
ttccaaattagttgaattggacattaagttagtagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttttgttgattctc |
57488 |
T |
|
| Q |
534 |
gatgatgttcacgaaatgaagcaattgcatgttttggctggaggacttgattggtttggtc |
594 |
Q |
| |
|
|||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
57487 |
gatgatgttcacgagctgaagcaattacaggttttggctggaggacttgattggtttggtc |
57427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 336; Significance: 0; HSPs: 5)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 35 - 594
Target Start/End: Original strand, 27941 - 28499
Alignment:
| Q |
35 |
tgtatttatacaactattattaataaattgatgtggttgtgaatttgtgatgcatttactcaaacttatttgattgtgtaggaatggttatgaacacgag |
134 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||| |||| |
|
|
| T |
27941 |
tgtatttatacaactattattaataaattgatatgattgtgaatttgtgatgcatttactcaaa-ttatttgattgggtaggaatggctatgaatgcgag |
28039 |
T |
|
| Q |
135 |
tttattgagaagatagtcaaatatgtatctaacaagatcaatcatgttcctttatatgttgctgattaccctgttggtattgagtctagggttcttaaag |
234 |
Q |
| |
|
||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||| |||||||| || |||| |
|
|
| T |
28040 |
tttatcgagaagatagtcaaatatatatctaacaagatcaatcatgttcctttacatgttgccgattaccctgttggtgttgaatctagggtcctaaaag |
28139 |
T |
|
| Q |
235 |
taaattcacttatggattttggatctaatggcgaagttcagatgctagggatctatgggcctagaggaaagggaaagacgacacttgcaagagcagttta |
334 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||| |||||| |||||||||| ||| | | |||| ||||||||| ||||||||||| |||||||| |
|
|
| T |
28140 |
taaattcacttatggatgttggatctaatggtgaagcacagatgatagggatctacgggaatcgtggaatgggaaagacaacacttgcaagggcagttta |
28239 |
T |
|
| Q |
335 |
taattccatagctgatcaatttgatgatttgtgttttcttcatgatgtaaggaaaagttcagctaaatatggtttggagcatctgcagggaaagctcctt |
434 |
Q |
| |
|
||||| ||||| ||||||||||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||| |||||||| ||| |||| ||||| |
|
|
| T |
28240 |
taattttatagccgatcaatttgatggtttgtgttttcttcacgatgtaagggaaaattcagctaaatatggtttagagcatctataggtaaagatcctt |
28339 |
T |
|
| Q |
435 |
tctaaattagttgaactggacattaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctag |
534 |
Q |
| |
|
|| |||||||||||| |||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||| ||||||| | |
|
|
| T |
28340 |
tccaaattagttgaattggaagttaagttaggagatgtcaacgagggaattccagtcttaaagcaaaggcttcaccgaaagaaagttctattgattctcg |
28439 |
T |
|
| Q |
535 |
atgatgttcacgaaatgaagcaattgcatgttttggctggaggacttgattggtttggtc |
594 |
Q |
| |
|
||||||||||| || | |||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
28440 |
atgatgttcacaaactaaagcaattgcgggttttggctggaggacttgattggtttggtc |
28499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #2
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 74 - 594
Target Start/End: Original strand, 35258 - 35776
Alignment:
| Q |
74 |
tgaatttgtgatgcatttactcaaacttatttgattgtgtaggaatggttatgaacacgagtttattgagaagatagtcaaatatgtatctaacaagatc |
173 |
Q |
| |
|
||||||||||||||||| || | ||||||||| ||||||||||||| |||||| || ||| |||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
35258 |
tgaatttgtgatgcattaaccaagacttatttg--tgtgtaggaatggatatgaatacaagtatattaagaagatagtcaaatatgtatcaaacaagatc |
35355 |
T |
|
| Q |
174 |
aatcatgttcctttatatgttgctgattaccctgttggtattgagtctagggttcttaaagtaaattcacttatggattttggatctaatggcgaagttc |
273 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| | |||||||||| || ||||||| |||| | ||||| ||||||||||||| ||||||| |
|
|
| T |
35356 |
aatcatgttcctttatatgttgccgattaccctgttggtctcaagtctagggtcctaaaagtaacttcatgtgtggatgttggatctaatggtgaagttc |
35455 |
T |
|
| Q |
274 |
agatgctagggatctatgggcctagaggaaagggaaagacgacacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttct |
373 |
Q |
| |
|
|||||||||||||||||||| || | |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
35456 |
agatgctagggatctatgggactggtggaattggaaagacaacacttgcaagagcagtttataattccatagctgatcaatttgatggtttgtgttttct |
35555 |
T |
|
| Q |
374 |
tcatgatgtaaggaaaagttcagctaaatatggtttggagcatctgcagggaaagctcctttctaaattagttgaactggacattaagttaggagatgtc |
473 |
Q |
| |
|
||| || |||||| ||| |||| ||||||||||||| |||||||| ||||||||||||||||| |||||||||||| ||||| || |||||||||||||| |
|
|
| T |
35556 |
tcacgacgtaagggaaaattcatctaaatatggtttagagcatctacagggaaagctcctttccaaattagttgaattggacgttgagttaggagatgtc |
35655 |
T |
|
| Q |
474 |
aacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctg |
573 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||| |||||||| | |
|
|
| T |
35656 |
aatgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgttgattctagatgatgttcacgaactaaagcaattgcaggttttggcgg |
35755 |
T |
|
| Q |
574 |
gaggacttgattggtttggtc |
594 |
Q |
| |
|
||| | ||||||||||||||| |
|
|
| T |
35756 |
gagaaattgattggtttggtc |
35776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #3
Raw Score: 297; E-Value: 1e-166
Query Start/End: Original strand, 82 - 594
Target Start/End: Original strand, 43494 - 44006
Alignment:
| Q |
82 |
tgatgcatttactcaaacttatttgattgtgtaggaatggttatgaacacgagtttattgagaagatagtcaaatatgtatctaacaagatcaatcatgt |
181 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||| |||||| |||| | ||| ||||||| ||| |
|
|
| T |
43494 |
tgatgcatttactcaaacttatttgattgggtaggaatggatatgaatacgagtttattgagaagatagtaaaatatttatccagcaaaatcaatcgtgt |
43593 |
T |
|
| Q |
182 |
tcctttatatgttgctgattaccctgttggtattgagtctagggttcttaaagtaaattcacttatggattttggatctaatggcgaagttcagatgcta |
281 |
Q |
| |
|
|||| |||||||||||||||||||||||||| | ||||||||||| || ||||||||| | || | ||| | ||||||| ||| | |||||| |||||| |
|
|
| T |
43594 |
tcctctatatgttgctgattaccctgttggtctcgagtctagggtcctaaaagtaaataaatttcttgatgtcggatctactggtgtagttcatatgcta |
43693 |
T |
|
| Q |
282 |
gggatctatgggcctagaggaaagggaaagacgacacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttcttcatgatg |
381 |
Q |
| |
|
|||||||||||| || | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||| |
|
|
| T |
43694 |
gggatctatgggactggtggaatgggaaagacaacacttgcaagagcagtttataattccatagctgatcaatttgattgtttatgttttcttcacgatg |
43793 |
T |
|
| Q |
382 |
taaggaaaagttcagctaaatatggtttggagcatctgcagggaaagctcctttctaaattagttgaactggacattaagttaggagatgtcaacgaggg |
481 |
Q |
| |
|
||||| ||| |||| ||||||||||||| |||||||| |||| |||||||||||| |||||||||||| |||||||| |||| |||||| |||||||||| |
|
|
| T |
43794 |
taagggaaaattcaactaaatatggtttagagcatctacaggaaaagctcctttccaaattagttgaattggacattgagttgggagatatcaacgaggg |
43893 |
T |
|
| Q |
482 |
aattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctggaggactt |
581 |
Q |
| |
|
||||||||| |||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||| ||||||||||||| ||||| |||||||||||| |
|
|
| T |
43894 |
aattccaataataaagaaaaggcttcaccgaaacaaggttctgctaattctcgatgatgttcacgaactgaagcaattgcaggttttagctggaggactt |
43993 |
T |
|
| Q |
582 |
gattggtttggtc |
594 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
43994 |
gattggttcggtc |
44006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 35 - 222
Target Start/End: Original strand, 117283 - 117470
Alignment:
| Q |
35 |
tgtatttatacaactattattaataaattgatgtggttgtgaatttgtgatgcatttactcaaacttatttgattgtgtaggaatggttatgaacacgag |
134 |
Q |
| |
|
|||||| ||||||| |||| || | |||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||| ||||| |
|
|
| T |
117283 |
tgtattcatacaacagttatcaacacattgatgttattgtgaatttgcgatgcatttactcaaacttatttgattgggtaggaatggctatgaatacgag |
117382 |
T |
|
| Q |
135 |
tttattgagaagatagtcaaatatgtatctaacaagatcaatcatgttcctttatatgttgctgattaccctgttggtattgagtcta |
222 |
Q |
| |
|
||||||||||||||||||||||| |||| | ||||||| | |||||||||||||||||| ||||||||||| ||| | ||||||| |
|
|
| T |
117383 |
tttattgagaagatagtcaaatacgtattcaggaagatcagttgtgttcctttatatgttgcggattaccctgtaggtctcgagtcta |
117470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 480 - 589
Target Start/End: Original strand, 40451 - 40560
Alignment:
| Q |
480 |
ggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctggaggac |
579 |
Q |
| |
|
|||||||| ||||||||||||| || |||| ||||| ||||| ||||||||||| || | | ||| |||||||| |||| | |||||||||||| | |
|
|
| T |
40451 |
ggaattcctatcataaagcaaatcctacaccataagaatgttcttttgattctagataatatggatgaactgaagcaactgcagggtttggctggagggc |
40550 |
T |
|
| Q |
580 |
ttgattggtt |
589 |
Q |
| |
|
|||||||||| |
|
|
| T |
40551 |
ttgattggtt |
40560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 102; Significance: 2e-50; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 79 - 595
Target Start/End: Complemental strand, 5090601 - 5090082
Alignment:
| Q |
79 |
ttgtgatgcatttactcaaacttatttgattgtgtaggaatggttatgaacacgagtttattgagaagatagtcaaatatgtatctaacaagatcaatca |
178 |
Q |
| |
|
|||||||||||||| ||||| |||| ||||| ||||| ||| |||||| ||||||||||| ||| |||||||| |||||| || |||||||||||||| |
|
|
| T |
5090601 |
ttgtgatgcatttattcaaatttatctgatttgataggactggatatgaatacgagtttattcagatgatagtcacatatgtctccaacaagatcaatca |
5090502 |
T |
|
| Q |
179 |
tgttcctttatatgttgctgattaccctgttggtattgagtctagggttcttaaagtaaattcacttatggattttggatctaatggcgaagttcagatg |
278 |
Q |
| |
|
||||||| |||||||||||||||| ||||| | ||| || | ||||| ||| || ||||||| ||||| |||| ||||||| |||| || ||| |
|
|
| T |
5090501 |
cactcctttacatgttgctgattacccggttggattagagcctcgtgttctgaaattatattcactactggatattggttctaatgataaagtccaaatg |
5090402 |
T |
|
| Q |
279 |
ctagggatctatgggcctagaggaaagggaaagacgacacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttcttcatg |
378 |
Q |
| |
|
||||||||||||||| || |||||| ||| || || ||||||| || |||| |||| |||| ||| ||| |||||||||| | | |||||||||| |
|
|
| T |
5090401 |
ctagggatctatgggactggaggaatgggtaaaaccacacttggaaaagcaatttacaatttcattgctcatcaatttgaatgtctttgttttcttccca |
5090302 |
T |
|
| Q |
379 |
atgtaaggaaaagttcagctaaa---tatggtttggagcatctgcagggaaagctcctttctaaattagttgaactggacattaagttaggagatgtcaa |
475 |
Q |
| |
|
|||| || ||| |||| ||||| ||||||| ||| |||| ||| | ||| |||||| |||| | ||| | |||| |||| ||| |||||| ||| |
|
|
| T |
5090301 |
atgtgagagaaaattcaactaaagtggatggtttagagtatcttcagagtaaggtcctttttaaaacaattggattggaaattaggtttggagatatcag |
5090202 |
T |
|
| Q |
476 |
cgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctgga |
575 |
Q |
| |
|
||||||||||||||||||||| ||||||| || ||||||| ||||| ||||||| |||||| || || || |||| ||| | || |||||||| ||| |
|
|
| T |
5090201 |
tgagggaattccaatcataaagaaaaggctacaaagaaagaaagttcttttgattctcgatgatattgacaaactgaaacaactacaggttttggccgga |
5090102 |
T |
|
| Q |
576 |
ggacttgattggtttggtct |
595 |
Q |
| |
|
| || ||||||||||||||| |
|
|
| T |
5090101 |
gaacctgattggtttggtct |
5090082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 456 - 594
Target Start/End: Original strand, 18074672 - 18074810
Alignment:
| Q |
456 |
attaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagc |
555 |
Q |
| |
|
|||||||||| |||||||| |||||||| ||||||||||| ||||| | |||||||| |||| ||||||| ||||| ||| || | ||||||| |
|
|
| T |
18074672 |
attaagttagcagatgtcagtgagggaatctcaatcataaaggaaaggttgtgtagaaagaagattcttttgattctcgatgacgttgacaatatgaagc |
18074771 |
T |
|
| Q |
556 |
aattgcatgttttggctggaggacttgattggtttggtc |
594 |
Q |
| |
|
|| || ||| ||||||||||||| |||||||||| |||| |
|
|
| T |
18074772 |
aactgaatgctttggctggaggagttgattggttcggtc |
18074810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 18731104 - 18731053
Alignment:
| Q |
123 |
tatgaacacgagtttattgagaagatagtcaaatatgtatctaacaagatca |
174 |
Q |
| |
|
|||||| || |||||||||| ||||||||||||||||| || |||||||||| |
|
|
| T |
18731104 |
tatgaatacaagtttattgaaaagatagtcaaatatgtctccaacaagatca |
18731053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 589
Target Start/End: Complemental strand, 18698667 - 18698534
Alignment:
| Q |
456 |
attaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagc |
555 |
Q |
| |
|
||||||||||||| ||| | ||||||||||| |||||| ||||||| || ||||||| |||| ||||||| ||||||||| || | || | | |
|
|
| T |
18698667 |
attaagttaggaggtgttagtgagggaattccttatataaaggaaaggctgcatacaaagaagattcttttgattctcgatgatgttgacaatttggaac |
18698568 |
T |
|
| Q |
556 |
aattgcatgttttggctggaggacttgattggtt |
589 |
Q |
| |
|
|| |||||| |||||||||||||| ||||||||| |
|
|
| T |
18698567 |
aactgcatgctttggctggaggacgtgattggtt |
18698534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 589
Target Start/End: Complemental strand, 18723296 - 18723219
Alignment:
| Q |
512 |
aaagaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctggaggacttgattggtt |
589 |
Q |
| |
|
||||||| |||| ||||||| ||||||||| || | |||| ||| |||||| |||||||||||||| ||||||||| |
|
|
| T |
18723296 |
aaagaagattcttttgattctcgatgatgttgacaatttgaaacaactgcatgctttggctggaggacctgattggtt |
18723219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 589
Target Start/End: Complemental strand, 18730771 - 18730638
Alignment:
| Q |
456 |
attaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagc |
555 |
Q |
| |
|
||||||||||||| ||| | ||||||||||| |||||| ||||||| || ||||||| |||| ||||||| ||||||||| || | || | | |
|
|
| T |
18730771 |
attaagttaggaggtgttagtgagggaattccctatataaaggaaaggctacatacaaagaagattcttttgattctcgatgatgttgacaatttggaac |
18730672 |
T |
|
| Q |
556 |
aattgcatgttttggctggaggacttgattggtt |
589 |
Q |
| |
|
|| |||||| |||||||||||||| ||||||||| |
|
|
| T |
18730671 |
aactgcatgctttggctggaggacgtgattggtt |
18730638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 95; Significance: 4e-46; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 96 - 590
Target Start/End: Original strand, 3280210 - 3280704
Alignment:
| Q |
96 |
aaacttatttgattgtgtaggaatggttatgaacacgagtttattgagaagatagtcaaatatgtatctaacaagatcaatcatgttcctttatatgttg |
195 |
Q |
| |
|
|||||||| |||||| | ||||||| ||| || || ||||||| | | | ||||||||| ||||||| |||||||| |||| || ||||||| |||||| |
|
|
| T |
3280210 |
aaacttatatgattgggcaggaatgaatatcaatacaagtttataggggatatagtcaaaaatgtatccaacaagataaatcgtgctcctttacatgttg |
3280309 |
T |
|
| Q |
196 |
ctgattaccctgttggtattgagtctagggttcttaaagtaaattcacttatggattttggatctaatggcgaagttcagatgctagggatctatgggcc |
295 |
Q |
| |
|
|||||||| ||||| || ||||| | || |||||||||||||||||| | || ||| ||||||| ||||| ||||| |||| |||||||| | |
|
|
| T |
3280310 |
tcgattacccggttggcatgcagtctcgagtccttaaagtaaattcacttctagaagttgcatctaattatgaagtcaagatgataggtatctatggact |
3280409 |
T |
|
| Q |
296 |
tagaggaaagggaaagacgacacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttcttcatgatgtaaggaaaagttca |
395 |
Q |
| |
|
| |||||| ||| ||||| || |||||||||||||||||||||| ||| ||| |||||||||| | | ||||||||||| |||| || ||| |||| |
|
|
| T |
3280410 |
tggaggaatgggtaagacaactcttgcaagagcagtttataatttcattgctaatcaatttgaatgtgtatgttttcttcacaatgtgagagaaaattca |
3280509 |
T |
|
| Q |
396 |
gctaaatatggtttggagcatctgcagggaaagctcctttctaaattagttgaactggacattaagttaggagatgtcaacgagggaattccaatcataa |
495 |
Q |
| |
|
|| ||| ||||| | |||||||| || | | ||||| ||| |||| | |||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
3280510 |
gcaaaacatggtctagagcatctccaaaaggattttctttccaaaactgttggattggacattaagttaggagatagtagtgagggaattccaatcataa |
3280609 |
T |
|
| Q |
496 |
agcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctggaggacttgattggttt |
590 |
Q |
| |
|
|||||||||| ||||| || |||||||| || |||| ||||| ||| ||||| ||||||| |||| || || |||||||| |||||||||||| |
|
|
| T |
3280610 |
agcaaaggctacaccggaaaaaggttctattggttcttgatgacgttaacgaattgaagcaggtgcaagtcttagctggagggcttgattggttt |
3280704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 315 - 594
Target Start/End: Complemental strand, 28127087 - 28126808
Alignment:
| Q |
315 |
acacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttcttcatgatgtaaggaaaagttcagctaaatatggtttggagc |
414 |
Q |
| |
|
|||||||||| |||| ||||||||| ||| |||||||||||||| | ||| |||||||| | ||||| || | | |||| || |||| |||| | | |
|
|
| T |
28127087 |
acacttgcaaaagcaatttataatttcattgctgatcaatttgaaggtttatgttttctagaagatgtgagagagatttcaactccatataatttgaaac |
28126988 |
T |
|
| Q |
415 |
atctgcagggaaagctcctttctaaattagttgaactggacattaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaa |
514 |
Q |
| |
|
|||| || | ||||||||||| ||| ||||| | |||||||||||||||||| ||| | ||||||||| |||||||||| |||||||| | |||| |
|
|
| T |
28126987 |
atctccaagaaaagctccttttgaaaacagttggattggacattaagttaggaggtgttagtgagggaattgcaatcataaaacaaaggctatgcagaaa |
28126888 |
T |
|
| Q |
515 |
gaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctggaggacttgattggtttggtc |
594 |
Q |
| |
|
|||| |||| ||||||| |||||||| || || || |||| | | | |||||||||||||||||||||||| |||| |
|
|
| T |
28126887 |
gaagattcttttgattcttgatgatgtcgacaaactggagcagctagaggctttggctggaggacttgattggttcggtc |
28126808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 477 - 589
Target Start/End: Complemental strand, 267590 - 267478
Alignment:
| Q |
477 |
gagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctggag |
576 |
Q |
| |
|
||||| ||||||||||| ||| ||||||| |||||||| |||| ||||||| ||||||||| |||| || || |||||||||| ||||||||||| |
|
|
| T |
267590 |
gagggcattccaatcattaaggaaaggctatgtagaaagaagattcttttgattctcgatgatgttaacgatataaaacaattgcatgctttggctggag |
267491 |
T |
|
| Q |
577 |
gacttgattggtt |
589 |
Q |
| |
|
||||||||||||| |
|
|
| T |
267490 |
gacttgattggtt |
267478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 452 - 594
Target Start/End: Complemental strand, 28163651 - 28163509
Alignment:
| Q |
452 |
ggacattaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatg |
551 |
Q |
| |
|
||||||||||||||||| ||| | ||||||||| |||||||||| |||||||| || |||| || |||| ||||||| |||||||| || || || |
|
|
| T |
28163651 |
ggacattaagttaggaggtgttagtgagggaattacaatcataaaacaaaggctacatagaaataaaattcttttgattcttgatgatgtcgacaaactg |
28163552 |
T |
|
| Q |
552 |
aagcaattgcatgttttggctggaggacttgattggtttggtc |
594 |
Q |
| |
|
|||| || | | ||||||||||||||| |||||||| |||| |
|
|
| T |
28163551 |
gagcagctggaggctttggctggaggactcgattggttcggtc |
28163509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 28163787 - 28163729
Alignment:
| Q |
315 |
acacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttct |
373 |
Q |
| |
|
|||||||||| |||| ||||||||| ||| |||||||||||||| | ||| |||||||| |
|
|
| T |
28163787 |
acacttgcaaaagcaatttataatttcattgctgatcaatttgaaggtttatgttttct |
28163729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 399
Target Start/End: Complemental strand, 267749 - 267668
Alignment:
| Q |
318 |
cttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttcttcatgatgtaaggaaaagttcagcta |
399 |
Q |
| |
|
|||||||||||| | ||||||| || |||||||||||||| | || ||||||||||||||||| || ||| |||||||| |
|
|
| T |
267749 |
cttgcaagagcaatctataattttattgctgatcaatttgaaggattatgttttcttcatgatgtgagagaaaattcagcta |
267668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 315 - 542
Target Start/End: Original strand, 16691637 - 16691864
Alignment:
| Q |
315 |
acacttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttcttcatgatgtaaggaaaagttcagctaaatatggtttggagc |
414 |
Q |
| |
|
|||||||| ||||| ||||||||| || |||||||||||||| |||||||||||||||||| || || ||| |||| ||||| |||| || || | |
|
|
| T |
16691637 |
acacttgctcgagcaatttataatttgattgctgatcaatttgaatgtttgtgttttcttcatgacgtgagagaaaattcatctaaacatggcttagaac |
16691736 |
T |
|
| Q |
415 |
atctgcagggaaagctcctttctaaattagttgaactggacattaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaa |
514 |
Q |
| |
|
|||| || | || ||||||||| ||| ||| | | ||||||||||||||| |||| | || ||||||||||| ||||| |||||||| || | ||| |
|
|
| T |
16691737 |
atcttcaagaaaggctcctttccaaaaccattggattagacattaagttaggacatgttagtgaaggaattccaataataaaacaaaggctacaacaaaa |
16691836 |
T |
|
| Q |
515 |
gaaggttctgctgattctagatgatgtt |
542 |
Q |
| |
|
|||||||| ||||||| ||||||||| |
|
|
| T |
16691837 |
aaaggttcttttgattctcgatgatgtt |
16691864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 16691423 - 16691463
Alignment:
| Q |
101 |
tatttgattgtgtaggaatggttatgaacacgagtttattg |
141 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
16691423 |
tatttgattgtgtaggaatgaatatgaacacgagtttattg |
16691463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 492 - 589
Target Start/End: Complemental strand, 2774 - 2677
Alignment:
| Q |
492 |
ataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagcaattgcatgttttggctggaggacttgattggtt |
589 |
Q |
| |
|
|||||| ||||||| || ||||||||||||| ||||||| ||||||||| || | ||||||||| | |||| |||||||||||||| ||||||||| |
|
|
| T |
2774 |
ataaaggaaaggctacatagaaagaaggttcttttgattcttgatgatgttgacaatatgaagcaactacatgctttggctggaggacctgattggtt |
2677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 456 - 594
Target Start/End: Original strand, 60480 - 60618
Alignment:
| Q |
456 |
attaagttaggagatgtcaacgagggaattccaatcataaagcaaaggcttcaccgaaagaaggttctgctgattctagatgatgttcacgaaatgaagc |
555 |
Q |
| |
|
|||||||||| |||||||| |||||||| ||||||||||| ||||| | |||||||| |||| ||||||| ||||| ||| || | ||||||| |
|
|
| T |
60480 |
attaagttagcagatgtcagtgagggaatctcaatcataaaggaaaggttgtgtagaaagaagattcttttgattctcgatgacgttgacaatatgaagc |
60579 |
T |
|
| Q |
556 |
aattgcatgttttggctggaggacttgattggtttggtc |
594 |
Q |
| |
|
|| || ||| ||||||||||||| |||||||||| |||| |
|
|
| T |
60580 |
aactgaatgctttggctggaggagttgattggttcggtc |
60618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 318 - 382
Target Start/End: Complemental strand, 29273247 - 29273183
Alignment:
| Q |
318 |
cttgcaagagcagtttataattccatagctgatcaatttgatgatttgtgttttcttcatgatgt |
382 |
Q |
| |
|
|||||||||||| | ||||||| | |||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
29273247 |
cttgcaagagcaatctataatttttttgctgatcaatttgaagatttatgttttcttcatgatgt |
29273183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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