View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15938_low_44 (Length: 239)

Name: NF15938_low_44
Description: NF15938
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15938_low_44
NF15938_low_44
[»] chr4 (48 HSPs)
chr4 (40-219)||(1374454-1374634)
chr4 (80-223)||(54426051-54426195)
chr4 (80-223)||(21731574-21731718)
chr4 (81-223)||(39603090-39603232)
chr4 (80-222)||(26783-26925)
chr4 (142-223)||(7839341-7839423)
chr4 (116-194)||(21523595-21523673)
chr4 (82-223)||(15173223-15173362)
chr4 (79-215)||(13126493-13126630)
chr4 (131-218)||(2244064-2244152)
chr4 (80-223)||(17822783-17822927)
chr4 (80-223)||(39691067-39691205)
chr4 (131-222)||(46588042-46588134)
chr4 (81-223)||(44862903-44863046)
chr4 (121-223)||(50681048-50681151)
chr4 (80-223)||(55414331-55414482)
chr4 (131-222)||(46592178-46592270)
chr4 (81-215)||(24169279-24169414)
chr4 (80-217)||(55302263-55302401)
chr4 (80-224)||(29388621-29388766)
chr4 (79-223)||(35571548-35571693)
chr4 (80-223)||(40830948-40831091)
chr4 (139-223)||(50662715-50662800)
chr4 (131-223)||(54069386-54069479)
chr4 (81-161)||(437083-437163)
chr4 (93-181)||(22030254-22030342)
chr4 (80-162)||(23319923-23320003)
chr4 (116-218)||(25904177-25904280)
chr4 (132-222)||(56249533-56249623)
chr4 (107-216)||(49202660-49202770)
chr4 (131-207)||(55064859-55064936)
chr4 (164-223)||(15177204-15177264)
chr4 (80-176)||(42403941-42404036)
chr4 (80-143)||(18815112-18815175)
chr4 (132-194)||(27330046-27330109)
chr4 (1-63)||(29877611-29877667)
chr4 (83-162)||(49003963-49004042)
chr4 (83-217)||(52315118-52315253)
chr4 (116-170)||(4304104-4304158)
chr4 (79-194)||(10192320-10192439)
chr4 (81-194)||(41336797-41336911)
chr4 (131-223)||(2996581-2996673)
chr4 (130-183)||(7601796-7601849)
chr4 (138-223)||(30668343-30668428)
chr4 (163-223)||(33586956-33587017)
chr4 (80-161)||(55437147-55437228)
chr4 (187-223)||(9760448-9760484)
chr4 (80-160)||(49940085-49940165)
[»] chr5 (30 HSPs)
chr5 (80-223)||(16937801-16937945)
chr5 (138-218)||(42500218-42500298)
chr5 (80-217)||(7705916-7706054)
chr5 (80-217)||(10639967-10640105)
chr5 (81-221)||(12857257-12857398)
chr5 (121-221)||(12857664-12857765)
chr5 (131-223)||(37954694-37954787)
chr5 (102-217)||(29925855-29925970)
chr5 (81-223)||(11700171-11700313)
chr5 (116-194)||(32859674-32859752)
chr5 (116-194)||(32861846-32861924)
chr5 (116-194)||(32862630-32862708)
chr5 (80-223)||(34102231-34102376)
chr5 (80-223)||(15246841-15246985)
chr5 (121-223)||(16457938-16458041)
chr5 (93-215)||(12425587-12425712)
chr5 (82-223)||(25461568-25461709)
chr5 (134-223)||(39105472-39105562)
chr5 (145-223)||(32009700-32009780)
chr5 (92-176)||(3520633-3520717)
chr5 (101-204)||(29815034-29815137)
chr5 (83-212)||(40438875-40439004)
chr5 (167-221)||(13697764-13697819)
chr5 (131-178)||(32942648-32942695)
chr5 (80-221)||(1464938-1465080)
chr5 (82-222)||(9107099-9107240)
chr5 (40-73)||(22573787-22573820)
chr5 (80-161)||(41535452-41535533)
chr5 (93-216)||(40426780-40426904)
chr5 (103-155)||(41981644-41981696)
[»] chr2 (39 HSPs)
chr2 (101-223)||(43279466-43279591)
chr2 (140-223)||(26202036-26202120)
chr2 (80-208)||(15305697-15305826)
chr2 (116-223)||(32592594-32592702)
chr2 (81-220)||(15757577-15757717)
chr2 (155-222)||(39073682-39073750)
chr2 (81-223)||(20952363-20952506)
chr2 (80-217)||(4606939-4607077)
chr2 (131-218)||(5745754-5745842)
chr2 (80-223)||(45229519-45229663)
chr2 (116-223)||(24100935-24101044)
chr2 (139-220)||(36125372-36125454)
chr2 (80-223)||(42420140-42420285)
chr2 (131-223)||(12289805-12289898)
chr2 (80-223)||(26143560-26143702)
chr2 (131-223)||(40279415-40279507)
chr2 (132-216)||(23974463-23974547)
chr2 (81-222)||(30331769-30331902)
chr2 (87-218)||(36534781-36534913)
chr2 (80-223)||(39659427-39659571)
chr2 (81-192)||(41812011-41812123)
chr2 (101-223)||(18066136-18066259)
chr2 (81-180)||(20933783-20933877)
chr2 (121-215)||(41851551-41851646)
chr2 (158-223)||(12194960-12195026)
chr2 (158-218)||(20926516-20926577)
chr2 (80-161)||(42659129-42659210)
chr2 (83-155)||(1633421-1633493)
chr2 (131-222)||(11863910-11864002)
chr2 (133-216)||(16451133-16451217)
chr2 (93-176)||(449903-449986)
chr2 (79-161)||(15120253-15120336)
chr2 (132-217)||(12313144-12313229)
chr2 (39-73)||(33321217-33321251)
chr2 (79-223)||(33931487-33931632)
chr2 (132-217)||(42457962-42458048)
chr2 (80-161)||(27317450-27317531)
chr2 (122-178)||(7782798-7782853)
chr2 (82-225)||(40682312-40682458)
[»] chr1 (47 HSPs)
chr1 (78-223)||(3233931-3234077)
chr1 (80-222)||(2295105-2295248)
chr1 (132-223)||(49938755-49938847)
chr1 (132-223)||(51929509-51929601)
chr1 (80-222)||(14576572-14576714)
chr1 (83-222)||(5741615-5741755)
chr1 (82-194)||(42575389-42575502)
chr1 (80-223)||(473172-473315)
chr1 (131-223)||(5709635-5709727)
chr1 (121-223)||(24915010-24915113)
chr1 (80-223)||(36872740-36872880)
chr1 (83-222)||(5720934-5721074)
chr1 (92-221)||(29904761-29904891)
chr1 (80-219)||(43230690-43230828)
chr1 (80-223)||(37631477-37631621)
chr1 (137-223)||(17603359-17603446)
chr1 (134-182)||(341497-341545)
chr1 (164-223)||(1510312-1510372)
chr1 (145-223)||(30286502-30286581)
chr1 (81-160)||(50644174-50644253)
chr1 (132-216)||(37473418-37473503)
chr1 (121-194)||(37617424-37617497)
chr1 (80-161)||(38247398-38247479)
chr1 (79-222)||(7941615-7941759)
chr1 (140-210)||(41184628-41184699)
chr1 (157-223)||(42174863-42174930)
chr1 (102-186)||(7927911-7927996)
chr1 (134-218)||(15477578-15477663)
chr1 (108-180)||(44931901-44931974)
chr1 (131-222)||(596184-596276)
chr1 (98-213)||(7069434-7069550)
chr1 (101-161)||(7119877-7119937)
chr1 (140-223)||(14443457-14443540)
chr1 (40-72)||(38781050-38781082)
chr1 (134-221)||(40977375-40977463)
chr1 (79-205)||(3887549-3887676)
chr1 (116-203)||(27145690-27145777)
chr1 (140-194)||(36872302-36872357)
chr1 (134-223)||(34290244-34290333)
chr1 (39-73)||(41196615-41196649)
chr1 (132-182)||(41505734-41505784)
chr1 (93-223)||(6556979-6557111)
chr1 (40-73)||(48819275-48819308)
chr1 (131-223)||(51695464-51695557)
chr1 (131-194)||(4445745-4445808)
chr1 (84-222)||(10199330-10199469)
chr1 (80-223)||(13810006-13810150)
[»] chr3 (31 HSPs)
chr3 (79-223)||(39980737-39980882)
chr3 (81-223)||(20880484-20880627)
chr3 (98-223)||(30443901-30444027)
chr3 (131-223)||(901932-902025)
chr3 (85-211)||(31365232-31365359)
chr3 (85-194)||(31365111-31365221)
chr3 (83-223)||(21367675-21367816)
chr3 (139-223)||(49556866-49556951)
chr3 (92-192)||(46778121-46778222)
chr3 (82-217)||(584060-584196)
chr3 (92-218)||(13715502-13715629)
chr3 (80-215)||(20257551-20257689)
chr3 (84-194)||(37689267-37689377)
chr3 (133-192)||(26911624-26911684)
chr3 (81-221)||(24684741-24684883)
chr3 (82-223)||(24085258-24085400)
chr3 (177-223)||(35696246-35696292)
chr3 (177-223)||(47132339-47132385)
chr3 (83-223)||(18405752-18405893)
chr3 (146-211)||(19983795-19983860)
chr3 (131-223)||(20170531-20170624)
chr3 (131-223)||(37273142-37273234)
chr3 (98-214)||(38902083-38902199)
chr3 (157-221)||(46478697-46478764)
chr3 (134-216)||(4401059-4401142)
chr3 (145-223)||(36631034-36631113)
chr3 (157-207)||(35574863-35574913)
chr3 (142-194)||(38276039-38276092)
chr3 (40-73)||(53261838-53261871)
chr3 (92-223)||(39602141-39602272)
chr3 (82-174)||(51929277-51929369)
[»] chr7 (32 HSPs)
chr7 (132-223)||(19022555-19022647)
chr7 (81-223)||(11619077-11619220)
chr7 (121-223)||(21568454-21568557)
chr7 (80-223)||(19302481-19302621)
chr7 (98-223)||(21196277-21196402)
chr7 (98-223)||(34744036-34744162)
chr7 (83-203)||(3927931-3928052)
chr7 (85-216)||(420375-420507)
chr7 (85-223)||(33678788-33678927)
chr7 (103-223)||(19214347-19214468)
chr7 (135-223)||(28614441-28614530)
chr7 (82-221)||(33601330-33601470)
chr7 (81-223)||(20526454-20526597)
chr7 (121-178)||(22940015-22940072)
chr7 (116-223)||(39629913-39630019)
chr7 (121-223)||(39967928-39968031)
chr7 (155-221)||(45338458-45338525)
chr7 (158-223)||(38138475-38138541)
chr7 (80-182)||(48140253-48140354)
chr7 (121-178)||(27288001-27288058)
chr7 (135-223)||(34035925-34036014)
chr7 (80-223)||(48470052-48470196)
chr7 (80-172)||(4970710-4970802)
chr7 (132-171)||(9210664-9210703)
chr7 (148-222)||(30570917-30570992)
chr7 (122-222)||(45593536-45593638)
chr7 (80-174)||(5947299-5947393)
chr7 (177-223)||(46280288-46280334)
chr7 (81-161)||(23214925-23215006)
chr7 (97-221)||(33601962-33602087)
chr7 (92-223)||(27863655-27863787)
chr7 (81-157)||(33266405-33266481)
[»] chr8 (36 HSPs)
chr8 (80-219)||(43045643-43045783)
chr8 (87-221)||(18133666-18133801)
chr8 (99-222)||(26771274-26771398)
chr8 (102-223)||(28763376-28763498)
chr8 (80-212)||(35643906-35644039)
chr8 (92-223)||(12976221-12976352)
chr8 (81-221)||(44792668-44792807)
chr8 (79-212)||(36963271-36963404)
chr8 (80-223)||(30251372-30251516)
chr8 (92-207)||(1058007-1058122)
chr8 (93-223)||(35534544-35534675)
chr8 (137-215)||(16825513-16825591)
chr8 (93-194)||(32840917-32841019)
chr8 (82-176)||(40859703-40859796)
chr8 (93-220)||(10758188-10758315)
chr8 (80-223)||(15180549-15180691)
chr8 (134-223)||(37945604-37945694)
chr8 (139-223)||(10114497-10114582)
chr8 (93-217)||(35749501-35749626)
chr8 (131-172)||(41589646-41589687)
chr8 (132-223)||(27028839-27028931)
chr8 (81-161)||(29818863-29818943)
chr8 (82-181)||(40981155-40981254)
chr8 (131-165)||(2487978-2488012)
chr8 (131-212)||(10120775-10120857)
chr8 (131-220)||(16736095-16736185)
chr8 (134-183)||(8146378-8146427)
chr8 (143-223)||(11861812-11861892)
chr8 (142-194)||(15247757-15247810)
chr8 (79-160)||(18591893-18591974)
chr8 (116-221)||(6881936-6882043)
chr8 (187-223)||(30657798-30657834)
chr8 (82-217)||(31716147-31716283)
chr8 (80-148)||(38602411-38602479)
chr8 (80-223)||(38648359-38648503)
chr8 (83-155)||(43717855-43717927)
[»] chr6 (22 HSPs)
chr6 (80-220)||(34430726-34430866)
chr6 (131-223)||(6536623-6536715)
chr6 (131-194)||(35099074-35099137)
chr6 (80-194)||(30926557-30926671)
chr6 (138-194)||(34863188-34863245)
chr6 (84-176)||(9559344-9559436)
chr6 (80-203)||(34882339-34882463)
chr6 (80-194)||(848026-848140)
chr6 (134-223)||(6200567-6200658)
chr6 (146-223)||(6016359-6016437)
chr6 (134-223)||(20368153-20368242)
chr6 (81-170)||(4163215-4163304)
chr6 (81-170)||(4224836-4224925)
chr6 (148-223)||(9763568-9763644)
chr6 (131-222)||(29754068-29754160)
chr6 (83-119)||(32861655-32861691)
chr6 (98-218)||(2455004-2455122)
chr6 (121-171)||(18611134-18611184)
chr6 (98-194)||(2455296-2455393)
chr6 (81-161)||(9559460-9559538)
chr6 (155-220)||(12836164-12836231)
chr6 (177-221)||(30536520-30536564)
[»] scaffold0221 (1 HSPs)
scaffold0221 (80-217)||(22245-22383)
[»] scaffold0050 (1 HSPs)
scaffold0050 (142-223)||(58750-58832)
[»] scaffold0147 (1 HSPs)
scaffold0147 (179-223)||(23639-23683)


Alignment Details
Target: chr4 (Bit Score: 105; Significance: 1e-52; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 40 - 219
Target Start/End: Original strand, 1374454 - 1374634
Alignment:
Q  40 cataagctcaaaaataagccaatcaaaatgggccagtcttctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttggg 139  Q
    |||||||||||||||||||||||| ||||||| |||| ||||||| ||||| ||||||||||||||||||||||| |||| |||||||| ||||||||||    
T  1374454 cataagctcaaaaataagccaatccaaatgggtcagtgttctgttaggattggcttaattgagcttatctactagcataaattttgtgattctgtttggg 1374553  T
Q  140 agaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttctttagttctccaatatagcttataa 219  Q
    ||||| |||||||||||||||| ||||| ||||||| || |||||||||||||||| | |  ||||||||||| |||||||    
T  1374554 agaatatatgaaaacaacttatgacaatattcataaattattttcaacttattttcataaaatctccaatataacttataa 1374634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 223
Target Start/End: Complemental strand, 54426195 - 54426051
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tt 178  Q
    ||||||||||| ||||| ||||||||||||||| | |||| ||||||||  ||| ||||||||| ||| ||||||| ||||| |||||||||||||| ||    
T  54426195 ctgtttggattggcttatttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttatgacaattttcataagctt 54426096  T
Q  179 ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||| |||||||| | ||||||||||||||| ||||||||||    
T  54426095 ttttcaagttattttcataagttctccaatatagattataaaaac 54426051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 80 - 223
Target Start/End: Original strand, 21731574 - 21731718
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcat-aagtt 178  Q
    ||||||||||| | ||| |||||| ||||||||   |||| ||||||||   |||||||||||| ||||||||||| ||||| ||||||||||| || ||    
T  21731574 ctgtttggattggtttatttgagcatatctactgacataagttttgtgagattgtttgggagaacttatgaaaacagcttatcacaattttcataaactt 21731673  T
Q  179 ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||| |||| | | ||||||||||||||||||||||||    
T  21731674 ttttcaacttactttcataaattctccaatatagcttataaaaac 21731718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 39603090 - 39603232
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttt 179  Q
    |||||||||| ||||| |||||||| |||| | | |||| ||||||||  ||||||||||||| ||| ||||||| ||||| |||||||| ||||| |||    
T  39603090 tgtttggattggcttatttgagctt-tctattggtataagttttgtgagactgtttgggagaacttaggaaaacagcttatgacaatttttataagcttt 39603188  T
Q  180 tttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||| || |||||||| | |||||||||||||| |||||||||||    
T  39603189 ttttaagttattttcataagttctccaatataccttataaaaac 39603232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 222
Target Start/End: Original strand, 26783 - 26925
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttt 179  Q
    ||||||||||| ||||| ||||||||||| ||| | ||||  ||||| |  ||||||  ||||| ||||||||||| ||||| |||| ||||| ||| ||    
T  26783 ctgtttggattggcttatttgagcttatcaactggcataagctttgttagactgtttccgagaaattatgaaaacagcttatgacaaatttcacaagctt 26882  T
Q  180 tttcaacttattttctttagttctccaatatagcttataaaaa 222  Q
    |||||  |||||||| | |||||||||||||||||||||||||    
T  26883 tttcagattattttcataagttctccaatatagcttataaaaa 26925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 7839341 - 7839423
Alignment:
Q  142 aatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||| | |||||| |||| ||||||||||||||    
T  7839341 aatttatgaaaacaacttatgacaattttcataagcttttttcaacttattttcgtaagttcttcaatctagcttataaaaac 7839423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 21523673 - 21523595
Alignment:
Q  116 ataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttttttcaacttattttc 194  Q
    |||| ||||||||| |||||||| |||||||||||||||||||||| ||| |||||||||| ||||||| |||||||||    
T  21523673 ataaattttgtgacactgtttggaagaatttatgaaaacaacttatgacatttttcataagctttttcagcttattttc 21523595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 223
Target Start/End: Original strand, 15173223 - 15173362
Alignment:
Q  82 gtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tttt 180  Q
    |||||||||  |||| |||| ||||||||||   |||| ||||||||  |||||||||||| |||||||||| | ||||| |||||||||||||| ||||    
T  15173223 gtttggattgacttatttgaacttatctactgacataagttttgtgagactgtttgggagactttatgaaaatagcttatgacaattttcataagttttt 15173322  T
Q  181 ttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||| | |||||| ||||   |||| ||||||||||||||||    
T  15173323 ttcaaatgattttcattag---tccagtatagcttataaaaac 15173362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 215
Target Start/End: Original strand, 13126493 - 13126630
Alignment:
Q  79 tctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-t 177  Q
    |||||||||||| ||||| || |||||| ||||||  |||| ||||||||  |||||||| |||| |||| |||||| ||||| ||| || ||||||| |    
T  13126493 tctgtttggattggcttattttagcttacctactaacataagttttgtgagactgtttggaagaacttataaaaacagcttatgacatttatcataagct 13126592  T
Q  178 tttttcaacttattttctttagttctccaatatagctt 215  Q
    ||||||| ||||||||| | ||||||| || |||||||    
T  13126593 tttttcagcttattttcataagttctcgaagatagctt 13126630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 2244152 - 2244064
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttata 218  Q
    |||||||||||||||| | |||||| ||||| ||||| |||||||  |||||||| ||||||||| | |||||||||||||||||||||    
T  2244152 ctgtttgggagaatttttaaaaacagcttatgacaatattcataaacttttttcaccttattttcataagttctccaatatagcttata 2244064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 223
Target Start/End: Original strand, 17822783 - 17822927
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tt 178  Q
    |||||||||||  |||| |||||||||||||||   |||| || |||||  || ||| ||||||  |||||||||| ||||| ||| |||||||||| ||    
T  17822783 ctgtttggattaacttatttgagcttatctactgacataagttctgtgagactatttaggagaacatatgaaaacagcttatgacatttttcataagctt 17822882  T
Q  179 ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||| | ||||||||| | |||||||||| ||||||||| |||||    
T  17822883 tttttagcttattttcataagttctccaagatagcttatgaaaac 17822927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 223
Target Start/End: Original strand, 39691067 - 39691205
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttt 179  Q
    ||||||| |||  |||| ||||||||||||||||| |||| ||||||||  ||||||| |||||||||||  |||| |||||     || || |||||||    
T  39691067 ctgtttgaattgacttatttgagcttatctactagcataagttttgtgagactgtttgagagaatttatgggaacagcttat-----ttatc-taagttt 39691160  T
Q  180 t-ttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    | |||||||||||||| | |||||| |||||||||||||||||||    
T  39691161 ttttcaacttattttcgtaagttcttcaatatagcttataaaaac 39691205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 46588042 - 46588134
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataagttttttc-aacttattttctttagttctccaatatagcttataaaaa 222  Q
    |||||||| |||| ||| ||||| ||||||| ||||||||||||||  ||||| ||||||||||| | |||||||||||||| ||||||||||    
T  46588042 ctgtttggtagaacttacgaaaataacttatgacaattttcataagccttttccaacttattttcataagttctccaatataacttataaaaa 46588134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 44862903 - 44863046
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttt 179  Q
    |||||||||| || || |||||||| |||||| | | || ||||||||   |||||||||||| || || ||| || |||| || ||||||||||| |||    
T  44862903 tgtttggattggcatatttgagcttgtctactggcaaaagttttgtgagattgtttgggagaaattgtgtaaagaaattatgacgattttcataagcttt 44863002  T
Q  180 tttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||||| | | |||||| |||| ||||||||||||||    
T  44863003 tttcaacttatttgcataagttctacaatttagcttataaaaac 44863046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 50681048 - 50681151
Alignment:
Q  121 ttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataa 219  Q
    ||||||||  ||||||| ||||| |||||||||||  | || |||||||||||||| ||||||||| |||||||| | | |||||||||||||||||||     
T  50681048 ttttgtgagactgtttgagagaacttatgaaaacagttaatgacaattttcataagcttttttcaatttattttcataatttctccaatatagcttatat 50681147  T
Q  220 aaac 223  Q
    ||||    
T  50681148 aaac 50681151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 223
Target Start/End: Original strand, 55414331 - 55414482
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaa-------caacttataacaattttca 172  Q
    |||||||||||  |||| |||||  |||||||| | |||| ||||||||  |||||| ||||||||||||||||       || ||||| ||| ||||||    
T  55414331 ctgtttggattgacttatttgagagtatctactggcataatttttgtgatgctgtttaggagaatttatgaaaagtgaaaacagcttatgacatttttca 55414430  T
Q  173 taag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||| |||||||||||||||||| | |||||||||| ||| ||||| |||||    
T  55414431 taagcttttttcaacttattttcataagttctccaagataacttatgaaaac 55414482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 46592178 - 46592270
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataagttttttc-aacttattttctttagttctccaatatagcttataaaaa 222  Q
    |||||||| |||| |||  |||| ||||||| ||||||||||||||  ||||| ||||||||||| | |||||||||||||| ||||||||||    
T  46592178 ctgtttggaagaacttacaaaaataacttatgacaattttcataagccttttccaacttattttcataagttctccaatataacttataaaaa 46592270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 24169414 - 24169279
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttt 179  Q
    |||||||||| ||||| | ||| ||||||||| | |||| ||||||||  || |||| ||||| || | |||| | ||||| ||| |||||||||| |||    
T  24169414 tgtttggattggcttattagagtttatctactggcataagttttgtgagactatttgagagaacttttaaaaatagcttatgacatttttcataagattt 24169315  T
Q  180 tttcaacttattttctttagttctccaatatagctt 215  Q
    ||||||||||||||| | || ||||||| |||||||    
T  24169314 tttcaacttattttcataagctctccaagatagctt 24169279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 217
Target Start/End: Complemental strand, 55302401 - 55302263
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tt 178  Q
    ||||| ||||||||||| || |||||||||| | | |||| ||||||||  |||||  ||| || ||||  ||||| ||||| ||||||||| |||| ||    
T  55302401 ctgttaggatttgcttattttagcttatctaatggcataagttttgtgagcctgttccggaaaacttatagaaacagcttatgacaattttcgtaagctt 55302302  T
Q  179 ttttcaacttattttctttagttctccaatatagcttat 217  Q
    |||||| ||||||||| | |||| ||||| |||||||||    
T  55302301 ttttcagcttattttcataagttttccaacatagcttat 55302263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 224
Target Start/End: Complemental strand, 29388766 - 29388621
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt- 178  Q
    |||||||| ||  |||| |||| |||||||||||  |||| |||||| |   |||||||||||| ||| |||| ||  |||| |||||||| ||| | |     
T  29388766 ctgtttgggttgacttatttgaccttatctactaacataagttttgtaagattgtttgggagaacttacgaaagcagtttatgacaatttttatatgctc 29388667  T
Q  179 ttttcaacttattttctttagttctccaatatagcttataaaaact 224  Q
    |||||||||||||||| | | ||||||| |||||||||||||||||    
T  29388666 ttttcaacttattttcataaattctccagtatagcttataaaaact 29388621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 223
Target Start/End: Original strand, 35571548 - 35571693
Alignment:
Q  79 tctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-t 177  Q
    |||||||||||| ||||| ||||||||||||||||| |||| |||||||     ||||||||||| || | |||||| ||||| ||| | ||||| || |    
T  35571548 tctgtttggattggcttatttgagcttatctactagcataagttttgtgggatagtttgggagaacttttaaaaacagcttattacactgttcatgagct 35571647  T
Q  178 tttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
      |||||||||||||||   ||||||| || ||||||||| |||||    
T  35571648 ggtttcaacttattttcacaagttctctaagatagcttatgaaaac 35571693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 223
Target Start/End: Original strand, 40830948 - 40831091
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatga-aaacaacttataacaattttcataag-t 177  Q
    ||||||||||| ||| | ||||||||||||| | | |||| ||||||||  ||||| || |||| |||||| ||||| ||||  |||| ||| ||||| |    
T  40830948 ctgtttggattggctaatttgagcttatctatt-gcataagttttgtgagactgttcggaagaaattatgagaaacagcttacgacaacttttataagct 40831046  T
Q  178 tttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||||||| | | ||||||||||| ||||||||||||||    
T  40831047 tttttcaacttattt-cataagttctccaatctagcttataaaaac 40831091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 50662715 - 50662800
Alignment:
Q  139 gagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||| |||||||||||  | || |||||||||||||| ||||||||||||||||||   | ||||||||||||||||||| ||||    
T  50662715 gagaacttatgaaaacagttaatgacaattttcataagcttttttcaacttattttcacaatttctccaatatagcttatataaac 50662800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 54069386 - 54069479
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||| || |||| |||||||| |||| ||||||||||||||| | |||| ||||||||||| |  ||||| ||||||| |||||||||||    
T  54069386 ctgtttggtaggatttttgaaaacagcttacaacaattttcataagctgtttttaacttattttcatatgttcttcaatataacttataaaaac 54069479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 437083 - 437163
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttat 161  Q
    |||||||||| | ||| |||||| |||||| ||| |||||||||||||  || ||||||| || |||||||||||||||||    
T  437083 tgtttggattggtttatttgagcatatctagtagcataacttttgtgagactatttgggaaaacttatgaaaacaacttat 437163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 22030342 - 22030254
Alignment:
Q  93 cttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttttt 181  Q
    |||| |||||||| |||| ||| |||| ||||||||  || |||||||||| ||||||||||| ||||| |||||||||| ||| ||||    
T  22030342 cttatttgagcttgtctattagcataagttttgtgagcctatttgggagaacttatgaaaacagcttatgacaattttcaaaagctttt 22030254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 23320003 - 23319923
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttata 162  Q
    ||||||||||| ||||| ||||| ||||||||||| |||  ||||| ||||  ||||||||||| ||||||||||| ||||||    
T  23320003 ctgtttggattggcttatttgagattatctactagcatacattttgagact--gtttgggagaagttatgaaaacagcttata 23319923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 25904177 - 25904280
Alignment:
Q  116 ataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagct 214  Q
    |||| ||||||||  ||||||||||||  ||||||||||| |||||  || |||||||||| |||||||| ||||||||  | |||||||||| | ||||    
T  25904177 ataaattttgtgagactgtttgggagagcttatgaaaacagcttatgccatttttcataagcttttttcagcttatttttataagttctccaaaacagct 25904276  T
Q  215 tata 218  Q
    ||||    
T  25904277 tata 25904280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 56249623 - 56249533
Alignment:
Q  132 tgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaa 222  Q
    ||||||| | || |||| |||||| ||||| ||| |||||||||| |||||||||||||||||||| ||| ||||||| |||||||| ||||    
T  56249623 tgtttggaacaacttatcaaaacagcttatgaca-ttttcataagcttttttcaacttattttcttaagtcctccaatgtagcttattaaaa 56249533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 216
Target Start/End: Complemental strand, 49202770 - 49202660
Alignment:
Q  107 tctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttctttagttctcc 205  Q
    |||||| | |||| ||||||||  |||||||| |||| |||| ||| ||  |||| ||| | |||||||||| |||||||||||||||| |||||| |||    
T  49202770 tctacttgcataagttttgtgagactgtttggaagaacttataaaaccagattatcacattgttcataagttgttttcaacttattttcattagttatcc 49202671  T
Q  206 aatatagctta 216  Q
    || ||||||||    
T  49202670 aagatagctta 49202660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 55064936 - 55064859
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttc-ataagttttttcaacttattttctttagttctccaa 207  Q
    ||||||||||||| || |||||||||||||| ||| ||||| |||  |||||||| ||||||||| | ||||||||||    
T  55064936 ctgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcataagttctccaa 55064859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 223
Target Start/End: Original strand, 15177204 - 15177264
Alignment:
Q  164 caattttcataagtttttt-caacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||||||||||| ||| | |||||| ||||||||| | ||||||||||||||||    
T  15177204 caattttcataagtttttttcaaatgattttcattagttctctagtatagcttataaaaac 15177264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 176
Target Start/End: Original strand, 42403941 - 42404036
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag 176  Q
    |||||||||||  |||| ||||||||||| |||   |||| |||||||   || ||||||||||||| |||||||| ||||| ||||||||||||||    
T  42403941 ctgtttggattgacttatttgagcttatcaactgacataagttttgtgtg-ctatttgggagaatttctgaaaacagcttatgacaattttcataag 42404036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 18815175 - 18815112
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaa 143  Q
    ||||||||||| ||||| ||||||||| ||||||| |||| ||||||||  ||||||| |||||    
T  18815175 ctgtttggattggcttatttgagcttacctactagcataagttttgtgagactgtttgagagaa 18815112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 27330046 - 27330109
Alignment:
Q  132 tgtttgggagaatttatgaaaacaacttataacaattttcataa-gttttttcaacttattttc 194  Q
    |||||| ||| ||||||||||||||||||| ||||||| |||||  ||||||||| ||||||||    
T  27330046 tgtttgagaggatttatgaaaacaacttatgacaatttgcataaccttttttcaaattattttc 27330109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 29877667 - 29877611
Alignment:
Q  1 ataaaagcttatttatttgcaagcttataaattgtttcacataagctcaaaaataagccaatc 63  Q
    |||||||||||||||||||||      ||||||||||  ||||||||||||||||||||||||    
T  29877667 ataaaagcttatttatttgca------taaattgttttgcataagctcaaaaataagccaatc 29877611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 49003963 - 49004042
Alignment:
Q  83 tttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttata 162  Q
    |||||| ||||||| |||||||||||||||||  ||| ||||||||  || |||| ||||| ||||||||| || |||||    
T  49003963 tttggaattgcttatttgagcttatctactagcttaagttttgtgagactatttgagagaacttatgaaaataagttata 49004042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 217
Target Start/End: Original strand, 52315118 - 52315253
Alignment:
Q  83 tttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt-ttt 181  Q
    ||||||||  |||| ||||| |||||||||    ||| ||||||||   ||||||| |||| |||| |||||||||||| ||| | ||||||||||  ||    
T  52315118 tttggattgacttatttgagtttatctactgacgtaagttttgtgagattgtttggaagaacttatcaaaacaacttatcacattattcataagttgctt 52315217  T
Q  182 tcaacttattttctttagttctccaatatagcttat 217  Q
    ||| ||||||||| | |||| ||||| |||||||||    
T  52315218 tcagcttattttcataagttttccaaaatagcttat 52315253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 4304104 - 4304158
Alignment:
Q  116 ataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaatttt 170  Q
    |||| ||||||||  ||||||| ||||| |||||||||||| |||||||||||||    
T  4304104 ataagttttgtgaaactgtttgagagaacttatgaaaacaatttataacaatttt 4304158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 194
Target Start/End: Complemental strand, 10192439 - 10192320
Alignment:
Q  79 tctgtttggatttgcttaattgagcttatctactagaat-aacttttgtgactctgtttgggagaatttatgaaaacaacttataaca---attttcata 174  Q
    |||| ||||||||||||| |||||||||| |||| | || ||| |||||||  ||||||| ||||| |||| |||| |||||||||||   || ||| ||    
T  10192439 tctggttggatttgcttatttgagcttatgtactggcataaacatttgtga-actgtttgagagaacttataaaaataacttataacatgcatgttcgta 10192341  T
Q  175 agtt-ttttcaacttattttc 194  Q
    |||| ||||||||||||||||    
T  10192340 agttgttttcaacttattttc 10192320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 41336911 - 41336797
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttt 179  Q
    ||||||||||  |||| ||||| |||||||||   |||| ||||||||    ||| || |||| ||| ||||||| ||||| ||| |||||||||| |||    
T  41336911 tgtttggattgacttatttgagtttatctactcacataagttttgtgagatagttaggaagaacttaagaaaacagcttatgacagttttcataagcttt 41336812  T
Q  180 tttcaacttattttc 194  Q
    |||||||||||||||    
T  41336811 tttcaacttattttc 41336797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 2996673 - 2996581
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||| ||||  ||||||||||||||||| ||| | | |||||| |||||||||||||||||| |  | ||||||| ||||||||| |||||    
T  2996673 ctgtttgagagagcttatgaaaacaacttatgaca-tgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaac 2996581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 7601849 - 7601796
Alignment:
Q  130 tctgtttgggagaatttatgaaaacaacttataacaattttcataagttttttc 183  Q
    ||||| || ||||| |||| |||||||||||| |||||||||| ||||||||||    
T  7601849 tctgtatgagagaacttataaaaacaacttatgacaattttcaaaagttttttc 7601796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 223
Target Start/End: Original strand, 30668343 - 30668428
Alignment:
Q  138 ggagaatttatgaaaacaacttataacaattttcataagttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||| || |||||||| ||||| ||| |||||||||| ||||||| |||| |||| | |  | ||||| |||||||||||||||    
T  30668343 ggagaacttgtgaaaacagcttatgacacttttcataagctttttcagcttaatttcataaactatccaagatagcttataaaaac 30668428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 33586956 - 33587017
Alignment:
Q  163 acaattttcataagttttt-tcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||| |||||||| |||| | ||||||||||| | |||||||| |||||||||||||||||    
T  33586956 acaatattcataagcttttcttaacttattttcataagttctccgatatagcttataaaaac 33587017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 55437228 - 55437147
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttat 161  Q
    ||||||||||| ||||| ||||| |||||||||   |||| ||||||||   ||||||  |||| |||||||||||||||||    
T  55437228 ctgtttggattggcttatttgagtttatctactgccataagttttgtgaaattgtttgaaagaacttatgaaaacaacttat 55437147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 223
Target Start/End: Complemental strand, 9760484 - 9760448
Alignment:
Q  187 ttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||| | ||||||||||||||||||||||||||    
T  9760484 ttattttcataagttctccaatatagcttataaaaac 9760448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 49940085 - 49940165
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaactta 160  Q
    |||||||||||  |||| ||||||||| || |||  |||| ||||||||  ||||||| ||||| ||||||||||| ||||    
T  49940085 ctgtttggattgacttatttgagcttacctgctaacataagttttgtgagactgtttgagagaacttatgaaaacagctta 49940165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 223
Target Start/End: Original strand, 16937801 - 16937945
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tt 178  Q
    ||||||||||| ||||| ||||||||||||||||| |||| ||||||||   ||||||| |||| ||||||||||| ||||| |||| ||||||||| ||    
T  16937801 ctgtttggattggcttatttgagcttatctactagcataagttttgtgagagtgtttggaagaacttatgaaaacagcttatgacaaatttcataagctt 16937900  T
Q  179 ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||| ||||||||| | |||||||||||||||| |||||||||    
T  16937901 ttttcagcttattttcctaagttctccaatatagcgtataaaaac 16937945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 218
Target Start/End: Original strand, 42500218 - 42500298
Alignment:
Q  138 ggagaatttatgaaaacaacttataacaattttcataagttttttcaacttattttctttagttctccaatatagcttata 218  Q
    |||||| ||||| ||||||||||  |||||||||||||| ||||||||||||||||| | |||||||||||||||||||||    
T  42500218 ggagaacttatggaaacaacttacgacaattttcataagctttttcaacttattttcataagttctccaatatagcttata 42500298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 217
Target Start/End: Original strand, 7705916 - 7706054
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tt 178  Q
    |||||||||||  |||| |||||| |||||||||| |||| ||||||||| || |||||||||| ||||||||||| ||||| ||| ||||||   | ||    
T  7705916 ctgtttggattgacttatttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagcttatgacagttttcacctgctt 7706015  T
Q  179 ttttcaacttattttctttagttctccaatatagcttat 217  Q
    |||||  |||||||||   ||||||||||||||||||||    
T  7706016 ttttcggcttattttcacaagttctccaatatagcttat 7706054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 217
Target Start/End: Complemental strand, 10640105 - 10639967
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttt 179  Q
    ||||||||||| ||||| ||||| |||||||||   |||| ||||||||   |||||||||||| ||||||||||| ||||| ||| |||||||||| ||    
T  10640105 ctgtttggattagcttatttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaacagcttatgacatttttcataagctt 10640006  T
Q  180 tttc-aacttattttctttagttctccaatatagcttat 217  Q
    |||| | ||||||||| | |||||||||| |||| ||||    
T  10640005 tttctagcttattttcataagttctccaaaatagtttat 10639967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 12857257 - 12857398
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttt 179  Q
    |||||||||| | ||| ||||||||||||| |    ||| ||||||||  || ||  |||||| ||||||||||||||||| |||||||||| ||| |||    
T  12857257 tgtttggattggtttatttgagcttatctattgacgtaagttttgtgaaacttttccggagaacttatgaaaacaacttatgacaattttcacaagcttt 12857356  T
Q  180 tttcaacttattttctttagttctccaatatagcttataaaa 221  Q
    ||||| ||||||||  | ||||||||||||||||||||||||    
T  12857357 tttcagcttatttttgtaagttctccaatatagcttataaaa 12857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 12857664 - 12857765
Alignment:
Q  121 ttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataa 219  Q
    ||||||||  |||||  |||||| ||||||||||||||||| |||||||||| ||  |||||||| ||||||||| | ||||||||||||||||||||||    
T  12857664 ttttgtgaaactgttccggagaacttatgaaaacaacttatgacaattttcacaaccttttttcagcttattttcataagttctccaatatagcttataa 12857763  T
Q  220 aa 221  Q
    ||    
T  12857764 aa 12857765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 37954787 - 37954694
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||| |||||| |||||||||||| ||||| | ||||||||| || |||||||||||||||||| |  |||||||||||||||||||||||||    
T  37954787 ctgttcgggagagtttatgaaaacagcttatgaaaattttcattagcttttttcaacttattttcatatgttctccaatatagcttataaaaac 37954694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 217
Target Start/End: Complemental strand, 29925970 - 29925855
Alignment:
Q  102 gcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtttttt-caacttattttctttagt 200  Q
    ||||||||||||| | || ||||||||  | ||||||||||| ||||||||||| ||||| ||||| |||||  ||||||| |||||||||||| | |||    
T  29925970 gcttatctactagca-aagttttgtgagaccgtttgggagaacttatgaaaacagcttatgacaatgttcatgtgtttttttcaacttattttcataagt 29925872  T
Q  201 tctccaatatagcttat 217  Q
    |||||||||||||||||    
T  29925871 tctccaatatagcttat 29925855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 11700313 - 11700171
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtttt 180  Q
    |||||||||||||||| ||||||||||| ||| | |||| ||||||||  ||||||   |||| ||||| ||||||||||| ||| | ||||||| || |    
T  11700313 tgtttggatttgcttatttgagcttatccactggcataagttttgtgagactgtttcacagaacttatggaaacaacttatgacattgttcataaattgt 11700214  T
Q  181 ttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||| ||||||||| | |||||||||  ||||| ||| |||||    
T  11700213 ttcatcttattttcataagttctccacgatagcatatcaaaac 11700171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 32859674 - 32859752
Alignment:
Q  116 ataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttttttcaacttattttc 194  Q
    |||| ||||||||| |||||||| |||||||||||||||||||||  ||| |||||||||| ||||||| |||||||||    
T  32859674 ataaattttgtgacactgtttggaagaatttatgaaaacaacttacgacatttttcataagctttttcagcttattttc 32859752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 32861846 - 32861924
Alignment:
Q  116 ataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttttttcaacttattttc 194  Q
    |||| ||||||||| |||||||| |||||||||||||||||||||  ||| |||||||||| ||||||| |||||||||    
T  32861846 ataaattttgtgacactgtttggaagaatttatgaaaacaacttacgacatttttcataagctttttcagcttattttc 32861924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 32862630 - 32862708
Alignment:
Q  116 ataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttttttcaacttattttc 194  Q
    |||| ||||||||| |||||||| |||||||||||||||||||||  ||| |||||||||| |||| || |||||||||    
T  32862630 ataaattttgtgacactgtttggaagaatttatgaaaacaacttacgacatttttcataagcttttccagcttattttc 32862708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 223
Target Start/End: Original strand, 34102231 - 34102376
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttt 179  Q
    ||||||||| |  |||| ||||||||| ||| | | |||| ||||||||| ||||||||| ||||||||||||| | ||||  ||||||||||||| |||    
T  34102231 ctgtttggaatcacttatttgagcttaactattggcataagttttgtgacactgtttgggggaatttatgaaaatagcttaagacaattttcataacttt 34102330  T
Q  180 tt--tcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||  |  |||| ||||| | |||||||||| || ||||||||||||    
T  34102331 tttattgacttgttttcatgagttctccaacatggcttataaaaac 34102376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 223
Target Start/End: Complemental strand, 15246985 - 15246841
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttt 179  Q
    ||||||||||||| ||| |||||||||||||||   |||| |||| | |   |||||||||||| |||||||| |||||||| |||   |||||||||||    
T  15246985 ctgtttggatttgtttatttgagcttatctactgacataagttttattagaatgtttgggagaacttatgaaagcaacttatgacatcattcataagttt 15246886  T
Q  180 ttt-caacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||| |||||||||||  | | ||||| || ||||||||| |||||    
T  15246885 tttgcaacttatttttatcatttctctaagatagcttatgaaaac 15246841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 16457938 - 16458041
Alignment:
Q  121 ttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataa 219  Q
    ||||||||  ||||||||||||| ||||||||||| ||||| ||| |||||||||| | ||||||  ||||||||   ||||||||||| ||||| ||||    
T  16457938 ttttgtgagactgtttgggagaacttatgaaaacagcttatgacagttttcataagctcttttcagtttattttcacaagttctccaatttagctcataa 16458037  T
Q  220 aaac 223  Q
    ||||    
T  16458038 aaac 16458041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 215
Target Start/End: Complemental strand, 12425712 - 12425587
Alignment:
Q  93 cttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttat--gaaaacaacttataacaattttcataagtt-ttttcaactta 189  Q
    |||| |||||||||||||||   |||| ||||||||  ||||||||||||| ||||  ||||||||| || |||| | |  ||||||| |||||||||||    
T  12425712 cttatttgagcttatctactgtcataagttttgtgagactgtttgggagaacttatatgaaaacaacctaaaacattgtcaataagttgttttcaactta 12425613  T
Q  190 ttttctttagttctccaatatagctt 215  Q
    ||||| | |||||||||| |||||||    
T  12425612 ttttcataagttctccaagatagctt 12425587  T

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Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 223
Target Start/End: Original strand, 25461568 - 25461709
Alignment:
Q  82 gtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttttt 181  Q
    ||||||||| ||||| |||||||||||||  || |||| ||| ||||  |||||||| ||||||  || ||| | |||||  ||||||||||||| |||     
T  25461568 gtttggattggcttatttgagcttatctatcagcataagttt-gtgatactgtttggtagaattcttggaaatagcttatggcaattttcataagctttg 25461666  T
Q  182 -tcaacttattttctttagttctccaatatagcttataaaaac 223  Q
     ||||||||||||  | |||||||||||| |||||||||||||    
T  25461667 atcaacttattttaataagttctccaatagagcttataaaaac 25461709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 39105562 - 39105472
Alignment:
Q  134 tttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||||||||||||||||| ||||| ||| | |||||||| | |||| | ||||||||| | |||||||||| ||||||||| |||||    
T  39105562 tttgggagaatttatgaaaacagcttatgacattgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaac 39105472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 223
Target Start/End: Complemental strand, 32009780 - 32009700
Alignment:
Q  145 ttatgaaaacaacttataacaattttcataag--ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||| ||| | |||||||||||||   |||||| ||||| ||||| | ||||||||||||||||||||||||||    
T  32009780 ttatgaaaacagcttgtgacaattttcataaagcttttttgaacttgttttcataagttctccaatatagcttataaaaac 32009700  T

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Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 3520717 - 3520633
Alignment:
Q  92 gcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag 176  Q
    ||||| ||||||| ||||||||| |||| || |||||  ||||||||||||| ||||||||||| ||||| ||  ||||||||||    
T  3520717 gcttatttgagctcatctactagtataagttgtgtgagactgtttgggagaacttatgaaaacatcttatgacttttttcataag 3520633  T

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Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 29815034 - 29815137
Alignment:
Q  101 agcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttttttcaacttattttctttagt 200  Q
    |||||||||||| | |||| ||||||||  || ||| | |||| ||| |||||||||||||||||||||||| ||| |||| |  ||||||||| | |||    
T  29815034 agcttatctacttgtataagttttgtgagactatttagaagaacttacgaaaacaacttataacaattttcaaaagcttttccgccttattttcataagt 29815133  T
Q  201 tctc 204  Q
    ||||    
T  29815134 tctc 29815137  T

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Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 40438875 - 40439004
Alignment:
Q  83 tttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtttttt 182  Q
    |||||||| ||||| ||| ||| ||||||| | |||| |||||| |    |||||||||||  | |||||||||||| | ||| |||||||||| |||||    
T  40438875 tttggattggcttatttgggctcatctactggcataagttttgtaaagacgtttgggagaacatttgaaaacaacttgtgacatttttcataagcttttt 40438974  T
Q  183 caacttattttctttagttctccaatatag 212  Q
    ||| |||||||| |  ||||||||| ||||    
T  40438975 caatttattttcatatgttctccaagatag 40439004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 13697764 - 13697819
Alignment:
Q  167 ttttcataagtttt-ttcaacttattttctttagttctccaatatagcttataaaa 221  Q
    |||||||||||||| |||||||||||||| | | |||||||| |||||||||||||    
T  13697764 ttttcataagtttttttcaacttattttcataacttctccaacatagcttataaaa 13697819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 32942695 - 32942648
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataagtt 178  Q
    ||||||||||||||||||||| ||| ||||| ||| ||||||||||||    
T  32942695 ctgtttgggagaatttatgaatacagcttatgacatttttcataagtt 32942648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 221
Target Start/End: Original strand, 1464938 - 1465080
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt- 178  Q
    ||||||| |||  |||| ||||||||| || |||| |||| || || ||  ||||| ||||||| ||||||||||| |||||  || |  |||||||||     
T  1464938 ctgtttgaattgacttatttgagcttagcttctagcataagttctgcgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 1465037  T
Q  179 ttttcaacttattttctttagttctccaatatagcttataaaa 221  Q
    |||||| |||||||||   ||| |||||| |||||||||||||    
T  1465038 ttttcagcttattttcacaagtcctccaagatagcttataaaa 1465080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 222
Target Start/End: Complemental strand, 9107240 - 9107099
Alignment:
Q  82 gtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttca-taagtttt 180  Q
    |||||||||  |||| ||||| ||||||| |   |||| ||||||||   |||||||||||| | ||||||||| ||||  ||||||||||  || ||||    
T  9107240 gtttggattgacttatttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagcttaggacaattttcacaaactttt 9107141  T
Q  181 ttcaacttattttctttagttctccaatatagcttataaaaa 222  Q
    |||  || |||||| | |||||||||||||| |||| |||||    
T  9107140 ttctgctaattttcataagttctccaatataacttacaaaaa 9107099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 22573787 - 22573820
Alignment:
Q  40 cataagctcaaaaataagccaatcaaaatgggcc 73  Q
    |||||||||||||||||||||||| |||||||||    
T  22573787 cataagctcaaaaataagccaatccaaatgggcc 22573820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 41535533 - 41535452
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttat 161  Q
    ||||| ||||| ||||| || ||||||||||||   || | ||||||||  | ||||||||||| |||||||||||||||||    
T  41535533 ctgttcggattggcttatttaagcttatctacttatatcagttttgtgaaacagtttgggagaacttatgaaaacaacttat 41535452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 40426904 - 40426780
Alignment:
Q  93 cttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttatt 191  Q
    |||| ||||||||||||| |   |||| ||||||||  ||||||||| |   ||||||||||| |||||  || |||||||||| |||||| | ||||||    
T  40426904 cttatttgagcttatctaatgacataaattttgtgagactgtttgggggtgcttatgaaaacagcttatgccatttttcataagcttttttaagcttatt 40426805  T
Q  192 ttctttagttctccaatatagctta 216  Q
    ||| | |||||||||| | ||||||    
T  40426804 ttcgtaagttctccaagacagctta 40426780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 155
Target Start/End: Original strand, 41981644 - 41981696
Alignment:
Q  103 cttatctactagaataacttttgtgactctgtttgggagaatttatgaaaaca 155  Q
    |||||||||||| || | ||||||||  ||||||||||||| |||||||||||    
T  41981644 cttatctactagcattagttttgtgagactgtttgggagaacttatgaaaaca 41981696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 43279466 - 43279591
Alignment:
Q  101 agcttatctactagaataacttttgtgactctgtttgggaga--atttatgaaaacaacttataacaattttcataag-ttttttcaacttattttcttt 197  Q
    |||||||||||||| |||| ||||||||  ||||||||||||  ||||||||||||| ||||| |||||||||||||| ||||||||||||||||||       
T  43279466 agcttatctactagcataagttttgtgagactgtttgggagagaatttatgaaaacagcttatgacaattttcataagcttttttcaacttattttcaca 43279565  T
Q  198 agttctccaatatagcttataaaaac 223  Q
    ||||||||||||||||||||||||||    
T  43279566 agttctccaatatagcttataaaaac 43279591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 26202120 - 26202036
Alignment:
Q  140 agaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||||||||||| | |||||||||||||| |||||||||||    
T  26202120 agaatttatgagaacaacttatgacaattttcataagcttttttcaacttattttcataagttctccaatatatcttataaaaac 26202036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 208
Target Start/End: Complemental strand, 15305826 - 15305697
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt- 178  Q
    ||||||||||| ||||| ||||||||||||| |   |||| ||||||||  |||||||| |||| || ||| ||||||||||  |||||||||||||||     
T  15305826 ctgtttggattggcttatttgagcttatctattgacataagttttgtgaaactgtttggtagaacttttgacaacaacttatggcaattttcataagttt 15305727  T
Q  179 ttttcaacttattttctttagttctccaat 208  Q
    |||||||||||||||| | |||||||||||    
T  15305726 ttttcaacttattttcataagttctccaat 15305697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 32592702 - 32592594
Alignment:
Q  116 ataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttttt-tcaacttattttctttagttctccaatatagct 214  Q
    |||| ||||| || ||| |||||||||| ||||||||| | ||||  |||||||||||||| |||| ||||||||||||| | ||||||||||||| |||    
T  32592702 ataagttttgggagtctatttgggagaacttatgaaaatagcttacgacaattttcataagcttttctcaacttattttcataagttctccaatattgct 32592603  T
Q  215 tataaaaac 223  Q
    |||||||||    
T  32592602 tataaaaac 32592594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 220
Target Start/End: Original strand, 15757577 - 15757717
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttt 179  Q
    |||||||| | | ||| |||||||||| |||| | |||| ||||||||  ||| ||||||||||||||||||||  ||||| |||||||||| ||| |||    
T  15757577 tgtttggaatggtttatttgagcttatttactggcataagttttgtgagactgcttgggagaatttatgaaaactgcttatgacaattttcagaagcttt 15757676  T
Q  180 tttcaacttattttctttagttctccaatatagcttataaa 220  Q
    ||||| ||||||||| |  ||||||   |||||||||||||    
T  15757677 tttcagcttattttcatacgttctcttgtatagcttataaa 15757717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 39073682 - 39073750
Alignment:
Q  155 aacttataacaattttcataagtttt-ttcaacttattttctttagttctccaatatagcttataaaaa 222  Q
    ||||||| |||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||||||    
T  39073682 aacttatgacaattttcataagtttcgttcaacttattttcactagttctccaatatagcttataaaaa 39073750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 20952506 - 20952363
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcat-aagttt 179  Q
    ||||||||||  |||| |||||||||| |||| | | || |||||| |  || |||  ||||| |||||||||||  ||||  |||||||||| || |||    
T  20952506 tgtttggattgacttatttgagcttatatactggcaaaagttttgttagactatttaagagaacttatgaaaacagtttatgccaattttcattaacttt 20952407  T
Q  180 tttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||    
T  20952406 tttcaacttattttcataagttctccaatatagctaataaaaac 20952363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 217
Target Start/End: Complemental strand, 4607077 - 4606939
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tt 178  Q
    ||||||||||| ||||| |||||||||||||| |  |||| ||||||||  || |||||||||| || |||||||||||||| ||| | ||||| || |     
T  4607077 ctgtttggattggcttatttgagcttatctaccaatataagttttgtgagactatttgggagaacttgtgaaaacaacttatgacattgttcatgagctg 4606978  T
Q  179 ttttcaacttattttctttagttctccaatatagcttat 217  Q
     ||| | ||||||||| | |||||||||| |||||||||    
T  4606977 cttttagcttattttcataagttctccaagatagcttat 4606939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 218
Target Start/End: Original strand, 5745754 - 5745842
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttata 218  Q
    |||||| | |||||||||||||||| ||||| |||||||||||||| ||||| ||||| |||||| | ||| ||| |||||||||||||    
T  5745754 ctgtttagaagaatttatgaaaacagcttatgacaattttcataagctttttccaactaattttcctaagtcctcaaatatagcttata 5745842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 223
Target Start/End: Complemental strand, 45229663 - 45229519
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tt 178  Q
    ||||||||||| | | | ||||||||||||||| | |||| || ||  || | ||||||||||| ||||||||| | ||||| ||| ||||||| || ||    
T  45229663 ctgtttggattggttgatttgagcttatctactggcataagttatgccacaccgtttgggagaacttatgaaaagaccttatgacatttttcattagctt 45229564  T
Q  179 ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||| ||||||||| | ||||||| || ||||||||| |||||    
T  45229563 ttttcagcttattttcataagttctcgaagatagcttatgaaaac 45229519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 24101044 - 24100935
Alignment:
Q  116 ataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag--ttttttcaacttattttctttagttctccaatatagc 213  Q
    |||| ||||||||  ||||||||||||| ||||| ||||| ||||| ||||| ||||||||  ||||||| |||| ||||  | |||||| |||||||||    
T  24101044 ataagttttgtgagactgtttgggagaacttatggaaacaccttatgacaatattcataagctttttttctacttgtttttataagttcttcaatatagc 24100945  T
Q  214 ttataaaaac 223  Q
    |||| |||||    
T  24100944 ttattaaaac 24100935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 220
Target Start/End: Complemental strand, 36125454 - 36125372
Alignment:
Q  139 gagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaa 220  Q
    |||||| |||||||||| |||||  |||||||| |||| |||||| ||||||||||| | ||||||||||| |||||||||||    
T  36125454 gagaatatatgaaaacagcttattgcaattttcgtaagctttttttaacttattttcataagttctccaatttagcttataaa 36125372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 223
Target Start/End: Original strand, 42420140 - 42420285
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataa-cttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-t 177  Q
    |||||||||||  |||| |||||| |||| ||||| |||| |  |||||||  |||||  ||||| ||| ||||||||||||| ||||||||||| || |    
T  42420140 ctgtttggattgacttacttgagcatatccactagcataagcccttgtgacattgtttctgagaacttacgaaaacaacttatgacaattttcattagct 42420239  T
Q  178 tttttcaac-ttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||| |||||||| | || ||||||||||||||| |||||||    
T  42420240 tttttcaactttattttcataag-tctccaatatagcttgtaaaaac 42420285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 12289898 - 12289805
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||||| |  | ||||||  |||| ||||| |||||||| |||||||||||||||||| | ||||||||||||||  ||||||||||    
T  12289898 ctgtttgggagaactattaaaaacagtttatgacaatattcataagcttttttcaacttattttcataagttctccaatataaattataaaaac 12289805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 223
Target Start/End: Original strand, 26143560 - 26143702
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt- 178  Q
    ||||||||||| ||||  |||||||||||||||   |||| ||||| ||||  ||||||||||| ||| |||||||||||||  || | |||| | |||     
T  26143560 ctgtttggattggcttgtttgagcttatctactgacataaattttgagact--gtttgggagaacttacgaaaacaacttatgtcattgttcacaggtta 26143657  T
Q  179 ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||| ||||||||| | ||||||||||  |||||||| |||||    
T  26143658 ttttcagcttattttcataagttctccaagttagcttatgaaaac 26143702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 40279507 - 40279415
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||||| | ||||||||||||| ||||| | | |||||  | |||||||||||||||| | |||||||||||||||||||| |||||    
T  40279507 ctgtttgggagaact-atgaaaacaacttttaacattgtccataaactgttttcaacttattttcataagttctccaatatagcttatgaaaac 40279415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 23974463 - 23974547
Alignment:
Q  132 tgtttgggagaatttatgaaaacaacttataacaattttcataagttttttcaacttattttctttagttctccaatatagctta 216  Q
    ||||| |||||| ||||||||||| ||||| |||||||||| |||||||||   || |||||| | ||||||| |||||||||||    
T  23974463 tgttttggagaacttatgaaaacagcttatgacaattttcacaagtttttttggctcattttcataagttctcaaatatagctta 23974547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 222
Target Start/End: Complemental strand, 30331902 - 30331769
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtttt 180  Q
    ||||||||||  |||| || ||||||||||||   |||| ||||||||  ||||||||||||| ||||||||| | ||||| |||||||||| ||| |      
T  30331902 tgtttggattgacttatttcagcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaaaaccttatgacaattttcacaagct-- 30331805  T
Q  181 ttcaacttattttctttagttctccaatatagcttataaaaa 222  Q
          |||||||| | |||||||||||||| ||||||||||    
T  30331804 ------ttattttcataagttctccaatatatcttataaaaa 30331769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 36534913 - 36534781
Alignment:
Q  87 gatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaa 185  Q
    |||| ||||| |||||||||| | ||   |||| ||||||||  |||||||||| || ||||||||||| ||||||| | | |||||||  | ||||||     
T  36534913 gattggcttatttgagcttatatgctttcataagttttgtgagactgtttgggataacttatgaaaacagcttataaaattgttcataatctattttcag 36534814  T
Q  186 cttattttctttagttctccaatatagcttata 218  Q
    ||||||||| ||| |||||| ||||||||||||    
T  36534813 cttattttcattaattctcctatatagcttata 36534781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 223
Target Start/End: Original strand, 39659427 - 39659571
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tt 178  Q
    ||||||||||| ||||  |||||||||||||||   |||| ||| ||||  |||| || ||||| ||| ||||||| ||||| |||| |||  |||| ||    
T  39659427 ctgtttggattggcttgcttgagcttatctactgacataagtttcgtgaggctgtctgagagaacttacgaaaacagcttatgacaaattttctaagctt 39659526  T
Q  179 ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    || ||| ||||| ||| | ||||||| ||||||||||||||||||    
T  39659527 ttgtcaccttatcttcataagttctctaatatagcttataaaaac 39659571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 192
Target Start/End: Original strand, 41812011 - 41812123
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttt 179  Q
    |||||||||| ||||| |||||||||||| |    | || ||| ||||  ||||||||||||| || |||||||| ||||| ||| |||||||||| |||    
T  41812011 tgtttggattggcttatttgagcttatctgcagtcaaaagtttagtgaggctgtttgggagaacttttgaaaacagcttatgacatttttcataagcttt 41812110  T
Q  180 tttcaacttattt 192  Q
    |||||||||||||    
T  41812111 tttcaacttattt 41812123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 18066259 - 18066136
Alignment:
Q  101 agcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttctttag 199  Q
    ||||||||||||   |||| ||||||||  |||||| | | || ||||||||||| ||||| ||| |  ||||||| | |||||| ||||||||||| ||    
T  18066259 agcttatctactgacataagttttgtgaaactgttttgtacaacttatgaaaacagcttatgacattgctcataagctattttcaccttattttcttaag 18066160  T
Q  200 ttctccaatatagcttataaaaac 223  Q
    |||||||| ||||||||| |||||    
T  18066159 ttctccaagatagcttatgaaaac 18066136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 180
Target Start/End: Complemental strand, 20933877 - 20933783
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtttt 180  Q
    ||||||||||| |||| ||||||||||||| ||| | || |||||| |     |||||||||| |||||||||||  |||| ||||||||||||||||||    
T  20933877 tgtttggattttcttatttgagcttatctattagcagaagttttgtta-----tttgggagaacttatgaaaacagtttatgacaattttcataagtttt 20933783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 41851646 - 41851551
Alignment:
Q  121 ttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagctt 215  Q
    ||||||||  ||| ||||||||||||||| ||||||||||| ||| |||||||||| |||| ||| |||| |||| | | |||||||| |||||||    
T  41851646 ttttgtgagactgattgggagaatttatggaaacaacttatgacacttttcataagcttttctcagcttaatttcataaattctccaagatagctt 41851551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 12195026 - 12194960
Alignment:
Q  158 ttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||| |||||||||||||| ||||||||||||||||||   |||||||||||||| |||||| ||||    
T  12195026 ttatgacaattttcataagcttttttcaacttattttcacaagttctccaatataacttatataaac 12194960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 20926577 - 20926516
Alignment:
Q  158 ttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttata 218  Q
    |||| ||||||||||| || |||||||||||||||||| | ||||||| |||||||||||||    
T  20926577 ttatgacaattttcattagcttttttcaacttattttcataagttctctaatatagcttata 20926516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 42659129 - 42659210
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttat 161  Q
    |||||||| || ||||| |||||||||| |||| | |||| ||||||||  ||||||||||||| || |||||||| |||||    
T  42659129 ctgtttgggttggcttatttgagcttatttactggcataagttttgtgagactgtttgggagaagttttgaaaacagcttat 42659210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 1633421 - 1633493
Alignment:
Q  83 tttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaaca 155  Q
    ||||||||| |||| ||||| ||||||||||| |||| |||||| |  ||||| ||||||| |||||||||||    
T  1633421 tttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacttatgaaaaca 1633493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 11864002 - 11863910
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcat-aagttttttcaacttattttctttagttctccaatatagcttataaaaa 222  Q
    |||||||||||||  | |||||||||||||| ||| ||||||| || |||||| ||||||||||  | |||||| |||||||| |||| ||||    
T  11864002 ctgtttgggagaacatttgaaaacaacttatgacatttttcataaactttttttaacttattttaataagttcttcaatataggttatgaaaa 11863910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 16451217 - 16451133
Alignment:
Q  133 gtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagctta 216  Q
    ||||||||||| ||||||||||||||||| ||| | ||||| || | |||||| |||||||||   |||||||||| ||||||||    
T  16451217 gtttgggagaacttatgaaaacaacttatgacattgttcatgagctgttttcagcttattttcacgagttctccaagatagctta 16451133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 449986 - 449903
Alignment:
Q  93 cttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag 176  Q
    |||| ||||||||||||||||| |||| |||| |||   |||||||||| | || |||||||| ||||| ||| ||||||||||    
T  449986 cttatttgagcttatctactagcataagttttatgagattgtttgggaggacttttgaaaacagcttatgacatttttcataag 449903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 15120336 - 15120253
Alignment:
Q  79 tctgtttggatttgcttaattgagcttatctactagaataa-cttttgtgactctgtttgggagaatttatgaaaacaacttat 161  Q
    ||||||||||||  |||| |||| |||||||||||| |||| |  |||||| |||||||||||||  ||||| |||||||||||    
T  15120336 tctgtttggattgacttatttgaacttatctactagcataaacagttgtgaatctgtttgggagagcttatggaaacaacttat 15120253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 12313144 - 12313229
Alignment:
Q  132 tgtttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttctttagttctccaatatagcttat 217  Q
    |||||||||||||||||||||||| |||||  | || ||||||||||  ||||| ||||||||| | || ||||||| |||||||||    
T  12313144 tgtttgggagaatttatgaaaacagcttat-gccatgttcataagttgatttcaccttattttcataagctctccaagatagcttat 12313229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 33321251 - 33321217
Alignment:
Q  39 acataagctcaaaaataagccaatcaaaatgggcc 73  Q
    ||||||||||||||||||||||||| |||||||||    
T  33321251 acataagctcaaaaataagccaatccaaatgggcc 33321217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 223
Target Start/End: Original strand, 33931487 - 33931632
Alignment:
Q  79 tctgtttggatttgcttaattgagcttatctactagaataa-cttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagt 177  Q
    ||||| ||||||  |||| ||||||||| ||| ||| |||| |  |||||||||||||||||||||   | |||| |||||||| || || |||||||||    
T  33931487 tctgtctggattaacttatttgagcttacctaatagcataagcacttgtgactctgtttgggagaacaaaagaaatcaacttatgac-atgttcataagt 33931585  T
Q  178 tt-tttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    || ||||| ||||||| |  || |||||||| ||||||||| |||||    
T  33931586 ttatttcagcttatttccactatttctccaaaatagcttatgaaaac 33931632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 42458048 - 42457962
Alignment:
Q  132 tgtttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttctttagttctccaatatagcttat 217  Q
    ||||| ||||| ||||||||||||||||| |||| |||  ||||||| |||||| ||||||||| |  |||||| || |||||||||    
T  42458048 tgtttaggagagtttatgaaaacaacttaaaacattttcaataagttgttttcagcttattttcatatgttctctaagatagcttat 42457962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 27317531 - 27317450
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttat 161  Q
    |||||||||||  |||| ||||||||||||||    |||| |||| |||  ||||||| ||||| |||||||||||||||||    
T  27317531 ctgtttggattgacttatttgagcttatctaccgacataagttttatgagactgtttgagagaacttatgaaaacaacttat 27317450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 7782853 - 7782798
Alignment:
Q  122 tttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt 178  Q
    |||||||  ||||||  |||||||||| ||||||||||||||| |||||||||||||    
T  7782853 tttgtgatactgtttaagagaatttataaaaacaacttataac-attttcataagtt 7782798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 225
Target Start/End: Original strand, 40682312 - 40682458
Alignment:
Q  82 gtttggatttgcttaattgagcttatctacta--ga-ataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt 178  Q
    ||||||||| ||||| ||||| || |||||||  || |||| ||||||||   |||||||||||| || | |||| | ||||| ||| | ||||||||||    
T  40682312 gtttggattggcttatttgagtttgtctactactgacataagttttgtgagattgtttgggagaacttgttaaaatagcttatgacattgttcataagtt 40682411  T
Q  179 -ttttcaacttattttctttagttctccaatatagcttataaaaactg 225  Q
     |||||||||||||||| | |||||| ||| ||| ||||| |||||||    
T  40682412 gttttcaacttattttcataagttct-caagatatcttatgaaaactg 40682458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 78 - 223
Target Start/End: Original strand, 3233931 - 3234077
Alignment:
Q  78 ttctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag- 176  Q
    |||||||||||||  |||| ||||||||||||| |    ||| ||||||||  ||||| ||||||| ||||||||||||||||||||| ||||||||||     
T  3233931 ttctgtttggattgacttatttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaacaacttataacagttttcataagt 3234030  T
Q  177 ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||| |||||||||| | ||||||||||||||||||||||||||    
T  3234031 ttttttctacttattttcataagttctccaatatagcttataaaaac 3234077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 222
Target Start/End: Complemental strand, 2295248 - 2295105
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tt 178  Q
    ||||||| ||| ||||| ||||||||||||||| | |||| ||||||||  ||||||||||||| ||||||||||| ||||| |||||||||||||| |     
T  2295248 ctgtttgaattggcttatttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcataagctc 2295149  T
Q  179 ttttcaacttattttctttagttctccaatatagcttataaaaa 222  Q
    | ||||||||||||||   |||||||  ||||||||||||||||    
T  2295148 tattcaacttattttcacaagttctctgatatagcttataaaaa 2295105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 132 - 223
Target Start/End: Complemental strand, 49938847 - 49938755
Alignment:
Q  132 tgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||||||| ||||||||||| ||||| |||||||||| ||| |||||||||||||||||| | ||||||| ||||||||||||||||||    
T  49938847 tgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttttcaacttattttcataagttctctaatatagcttataaaaac 49938755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 51929509 - 51929601
Alignment:
Q  132 tgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||||||||| | | ||||||||||||||| ||||||||||    
T  51929509 tgtttgggagaattcatgaaaacagcttatgacaattttcataagcttttttcaacttatttccataagttctccaatatagtttataaaaac 51929601  T

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Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 80 - 222
Target Start/End: Original strand, 14576572 - 14576714
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tt 178  Q
    ||||||||||| ||||| ||||||||||||||| |  ||| ||||||| | |||||||||| || || |||||||| ||||| |||||||||| ||| ||    
T  14576572 ctgtttggattggcttatttgagcttatctactggcttaaattttgtggcactgtttgggacaacttgtgaaaacagcttatgacaattttcaaaagctt 14576671  T
Q  179 ttttcaacttattttctttagttctccaatatagcttataaaaa 222  Q
    |||||| |||||||||   ||||||| |||||||||||||||||    
T  14576672 ttttcagcttattttc-aaagttctctaatatagcttataaaaa 14576714  T

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Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 5741755 - 5741615
Alignment:
Q  83 tttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag--tttt 180  Q
    |||||||| ||||| ||||||||| ||||| | |||| ||||||    ||||||||||||| ||||||||||||||||| |||| |||||||||  ||||    
T  5741755 tttggattggcttatttgagcttaactacttgcataagttttgttgaactgtttgggagaacttatgaaaacaacttatgacaa-tttcataagtatttt 5741657  T
Q  181 ttcaacttattttctttagttctccaatatagcttataaaaa 222  Q
    |||| || |||||| | ||||||| |||||||||||||||||    
T  5741656 ttcagctgattttcataagttctctaatatagcttataaaaa 5741615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 194
Target Start/End: Original strand, 42575389 - 42575502
Alignment:
Q  82 gtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tttt 180  Q
    |||||||||  |||| ||||||||||||||||| |||| ||||||||  ||||||| || ||||||| |||||||||||| ||| |||||||||| ||||    
T  42575389 gtttggattgccttatttgagcttatctactagcataaattttgtgaggctgtttgagaaaatttataaaaacaacttatgacagttttcataagctttt 42575488  T
Q  181 ttcaacttattttc 194  Q
    |||||||| |||||    
T  42575489 ttcaacttcttttc 42575502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 223
Target Start/End: Complemental strand, 473315 - 473172
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tt 178  Q
    |||||| |||| ||||| |||||| |||||||| | |||| || |||||  |  |||||||||| ||||||||| | |||||| ||||||||||||| ||    
T  473315 ctgtttagattggcttatttgagcctatctactggcataagttctgtgaaacattttgggagaacttatgaaaaaagcttata-caattttcataagctt 473217  T
Q  179 ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||||||||||| | |||||||||||| | |||||||||||    
T  473216 ttttcaacttattttcataagttctccaatagaacttataaaaac 473172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 5709727 - 5709635
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataagttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||||||||||||||| | ||| |  ||||||||||||| |||||||||||||||||   |||||||||||||||||| |||||||    
T  5709727 ctgtttgggagaatttatgaaaatagcttttggcaattttcataagctttttcaacttattttcacaagttctccaatatagcttctaaaaac 5709635  T

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Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 24915010 - 24915113
Alignment:
Q  121 ttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataa 219  Q
    ||||||||  |||||||||| |||||||||||||||||||| ||| |||||||||| ||||||||||||||||||   |||||||||| | ||||||| |    
T  24915010 ttttgtgaggctgtttgggacaatttatgaaaacaacttatgacatttttcataagcttttttcaacttattttcacaagttctccaagacagcttatga 24915109  T
Q  220 aaac 223  Q
    ||||    
T  24915110 aaac 24915113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 80 - 223
Target Start/End: Complemental strand, 36872880 - 36872740
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttt 179  Q
    ||||||||||| ||||| || |||||| |||  |  |||| ||||| ||  |||||| |||||||||||||||||   |||| |||||||| ||||| ||    
T  36872880 ctgtttggattggcttatttaagcttaactaacaacataagttttgcgagactgttttggagaatttatgaaaac---ttatgacaattttgataagctt 36872784  T
Q  180 tttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||||||| | |||||| ||||||||||| |||||||    
T  36872783 tttcaacttattttcataagttctgcaatatagcttgtaaaaac 36872740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 5721074 - 5720934
Alignment:
Q  83 tttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag--tttt 180  Q
    |||||||| ||||| ||||||||| ||||| | |||| ||||||    ||||||||||||| ||||||||||| ||||| |||| |||||||||  ||||    
T  5721074 tttggattggcttatttgagcttaactacttgcataagttttgttggactgtttgggagaacttatgaaaacagcttatgacaa-tttcataagtatttt 5720976  T
Q  181 ttcaacttattttctttagttctccaatatagcttataaaaa 222  Q
    |||| || |||||| |  |||||| |||||||||||||||||    
T  5720975 ttcagctgattttcatatgttctctaatatagcttataaaaa 5720934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 221
Target Start/End: Complemental strand, 29904891 - 29904761
Alignment:
Q  92 gcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttat 190  Q
    ||||| ||||||||||||||| | |||| ||||||||  ||||||| ||||| |||| |||||| |||||  ||||||||| ||| |||||||| |||||    
T  29904891 gcttatttgagcttatctacttgcataagttttgtgagactgtttgagagaacttataaaaacagcttatggcaattttcaaaagcttttttcaccttat 29904792  T
Q  191 tttctttagttctccaatatagcttataaaa 221  Q
    |||| | ||||||  ||||||| ||||||||    
T  29904791 tttcataagttctataatatagtttataaaa 29904761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 219
Target Start/End: Original strand, 43230690 - 43230828
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tt 178  Q
    ||||||||||| || || |||||||| |||||| | |||| ||||  ||   ||||| |||||||||||||||||| |||   ||| |||| ||||| ||    
T  43230690 ctgtttggattggcatatttgagcttctctactggcataagttttacgagattgtttaggagaatttatgaaaacagcttg--acagtttttataagctt 43230787  T
Q  179 ttttcaacttattttctttagttctccaatatagcttataa 219  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  43230788 ttttcaacttattttcattagttctccaatatagcctataa 43230828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 223
Target Start/End: Original strand, 37631477 - 37631621
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tt 178  Q
    ||||||||||| ||||| ||||||| ||||| ||| |||| ||| ||||  | ||   ||| || ||||||||||| ||| | |||||||||| ||| ||    
T  37631477 ctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctt 37631576  T
Q  179 ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||| ||||||||| | ||||||||||||||||||| ||||||    
T  37631577 ttttcagcttattttcataagttctccaatatagcttacaaaaac 37631621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 17603359 - 17603446
Alignment:
Q  137 gggagaatttatgaaaacaacttataacaattttcataagtttttt-caacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||| ||| ||||||| ||||| |||||||||||||  ||||| ||||||||||||   ||||||||||||||||||||||||||    
T  17603359 gggagaacttacgaaaacagcttatgacaattttcataaactttttacaacttattttcagaagttctccaatatagcttataaaaac 17603446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 341545 - 341497
Alignment:
Q  134 tttgggagaatttatgaaaacaacttataacaattttcataagtttttt 182  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  341545 tttgggataatttatgaaaacaacttatgacaattttcataagtttttt 341497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 223
Target Start/End: Original strand, 1510312 - 1510372
Alignment:
Q  164 caattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||||| |||||||||||||||||| | |||||||||||| |||||||||||||    
T  1510312 caattttcataagcttttttcaacttattttcgtaagttctccaatagagcttataaaaac 1510372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 30286502 - 30286581
Alignment:
Q  145 ttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||| | |||  |||||||| ||| |||||||||||||||    
T  30286502 ttatgaaaacagcttatgacaattttcataagcttttttcaactaaattttcttagttcttcaaaatagcttataaaaac 30286581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 50644174 - 50644253
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaactta 160  Q
    ||||||||||  |||| ||||||||||||||||  |||  ||||||||  ||||||||||||| ||||||||||||||||    
T  50644174 tgtttggattgacttatttgagcttatctactaacatatgttttgtgagactgtttgggagaacttatgaaaacaactta 50644253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 37473503 - 37473418
Alignment:
Q  132 tgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagctta 216  Q
    |||||||||||| || |||||||||||||| ||| |||||||||| ||||| || ||||||||| | |||||||||| ||| ||||    
T  37473503 tgtttgggagaacttttgaaaacaacttatgacatttttcataagctttttccagcttattttcataagttctccaagataactta 37473418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 37617424 - 37617497
Alignment:
Q  121 ttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttttttcaacttattttc 194  Q
    ||||||||  ||||||| ||||||||||||||||| ||| | |||| ||||||||| ||| |||||||||||||    
T  37617424 ttttgtgagactgtttgcgagaatttatgaaaacagcttttgacaaatttcataagctttgtcaacttattttc 37617497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 38247479 - 38247398
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttat 161  Q
    ||||||||||| | ||| |||| |||||||||| | |||| ||||||| | ||||||||||||| ||||||||||| |||||    
T  38247479 ctgtttggattgggttatttgaacttatctactggcataagttttgtgtcactgtttgggagaacttatgaaaacagcttat 38247398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 222
Target Start/End: Complemental strand, 7941759 - 7941615
Alignment:
Q  79 tctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-t 177  Q
    |||||||||||| | ||| ||||| |||||| |||   | | ||||||||  |||||||| |||||||||||||||| ||||| ||| | |||  ||| |    
T  7941759 tctgtttggattggtttatttgagtttatctgctaacgtgagttttgtgagactgtttggaagaatttatgaaaacagcttatgacattgttccgaagct 7941660  T
Q  178 tttttcaacttattttctttagttctccaatatagcttataaaaa 222  Q
     |||||||||||||||| | |||||||| | ||||||||| ||||    
T  7941659 attttcaacttattttcataagttctccgaaatagcttatgaaaa 7941615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 41184628 - 41184699
Alignment:
Q  140 agaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatat 210  Q
    |||| ||||||||| | ||||| |||||||||||||| |||||||||||||||||| | |||| ||||||||    
T  41184628 agaacttatgaaaatagcttatgacaattttcataagtttttttcaacttattttcataagttttccaatat 41184699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 42174930 - 42174863
Alignment:
Q  157 cttataacaattttcataagtt-ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||| |||||||||||||| | |||| ||||||||||| | |||||||||||||| |||||||||||    
T  42174930 cttatgacaattttcataagctgtttttaacttattttcataagttctccaatataacttataaaaac 42174863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 7927996 - 7927911
Alignment:
Q  102 gcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaac 186  Q
    |||||||||||   |||| |||||||||| |||||||||||   |||||| ||||||||| |||||| ||||||| ||||||||||    
T  7927996 gcttatctactgacataaattttgtgactttgtttgggagagcctatgaatacaacttatgacaattgtcataagcttttttcaac 7927911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 15477663 - 15477578
Alignment:
Q  134 tttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttata 218  Q
    |||| ||||| ||||||||||| ||||| |||||||||| ||| |||||||| ||||| ||| | ||||||| |||||| ||||||    
T  15477663 tttgtgagaacttatgaaaacagcttatgacaattttcaaaagcttttttcagcttatattcataagttctctaatataacttata 15477578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 44931901 - 44931974
Alignment:
Q  108 ctactagaataacttttgtgactctgtttgggagaatttatg-aaaacaacttataacaattttcataagtttt 180  Q
    ||||||| |||| ||||| ||  ||||||||||||||||||| |||| | ||||| ||||||||||||||||||    
T  44931901 ctactagcataagttttgagagactgtttgggagaatttatgaaaaatagcttatgacaattttcataagtttt 44931974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 596276 - 596184
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataagtttttt-caacttattttctttagttctccaatatagcttataaaaa 222  Q
    |||||||| |||| |  ||||||||||| || |||||| ||  ||||||||| |||||||||||| ||||||||||  ||||| |||||||||    
T  596276 ctgtttggaagaagtgttgaaaacaactcatgacaattatcgcaagtttttttcaacttattttcattagttctcccgtatagattataaaaa 596184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 213
Target Start/End: Complemental strand, 7069550 - 7069434
Alignment:
Q  98 ttgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttctt 196  Q
    |||||||||||||||| ||| | |||||| |  || ||||| |||| |||| |||||| |||||  || | |||||||||| ||||||| ||||||||      
T  7069550 ttgagcttatctactaaaattagttttgtaagactatttggaagaacttatcaaaacagcttatgccattgttcataagtttttttcaaattattttcac 7069451  T
Q  197 tagttctccaatatagc 213  Q
    ||||||||||| |||||    
T  7069450 tagttctccaagatagc 7069434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 7119877 - 7119937
Alignment:
Q  101 agcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttat 161  Q
    ||||||| |||||| |||| ||||||||  |||||||  ||||||||||||||||||||||    
T  7119877 agcttatatactagcataagttttgtgagactgtttgcaagaatttatgaaaacaacttat 7119937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 14443540 - 14443457
Alignment:
Q  140 agaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||||||||||| ||| ||||| | ||| |||||| |||||| ||||||||| | | ||||||||| ||||||||||||||    
T  14443540 agaatttatgaaaacagcttttaaca-tgttcgtaagttgttttcaccttattttcataaattctccaatgtagcttataaaaac 14443457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 72
Target Start/End: Complemental strand, 38781082 - 38781050
Alignment:
Q  40 cataagctcaaaaataagccaatcaaaatgggc 72  Q
    |||||||||||||||||||||||||||||||||    
T  38781082 cataagctcaaaaataagccaatcaaaatgggc 38781050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 40977375 - 40977463
Alignment:
Q  134 tttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaa 221  Q
    |||||||||| |||||||||||| |||| |||||||||| ||| ||||| || ||||||||| |  ||||||  |||| ||||||||||    
T  40977375 tttgggagaacttatgaaaacaatttatgacaattttcaaaagctttttccagcttattttcatatgttctcttatatggcttataaaa 40977463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 205
Target Start/End: Original strand, 3887549 - 3887676
Alignment:
Q  79 tctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-t 177  Q
    ||||||||||||  |||| ||||||||  ||| | | |||| |||||| |  |||||||| |||| ||||||||||| ||||| ||| | |||||||| |    
T  3887549 tctgtttggattgacttatttgagctttactattggtataagttttgtaaggctgtttggaagaacttatgaaaacatcttatgacattgttcataagct 3887648  T
Q  178 tttttcaacttattttctttagttctcc 205  Q
     |||| ||||||||||| | ||||||||    
T  3887649 gtttttaacttattttcataagttctcc 3887676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 27145690 - 27145777
Alignment:
Q  116 ataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttttttcaacttattttctttagttct 203  Q
    |||| ||||||||  || ||||| |||| ||| |||||| |||||| ||| | |||||||||||||||| ||||||||| | ||||||    
T  27145690 ataagttttgtgagactttttggaagaacttaagaaaacgacttatgacattgttcataagttttttcagcttattttcataagttct 27145777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 36872357 - 36872302
Alignment:
Q  140 agaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttc 194  Q
    |||||||||||||||| ||||| | |||||||||||| ||||||||||||| ||||    
T  36872357 agaatttatgaaaacagcttattataattttcataagcttttttcaacttaatttc 36872302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 34290333 - 34290244
Alignment:
Q  134 tttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||||||| |||| | ||||| || || |||||||||| |||||| ||||||||| | |||||| ||| ||||||||| |||||    
T  34290333 tttgggagaatttattaaaaaagcttatgac-atattcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaac 34290244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 41196649 - 41196615
Alignment:
Q  39 acataagctcaaaaataagccaatcaaaatgggcc 73  Q
    ||||||||||||||||||||||||| |||||||||    
T  41196649 acataagctcaaaaataagccaatccaaatgggcc 41196615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 41505784 - 41505734
Alignment:
Q  132 tgtttgggagaatttatgaaaacaacttataacaattttcataagtttttt 182  Q
    |||||||||||| ||||||||||| ||||| |||||||||  |||||||||    
T  41505784 tgtttgggagaacttatgaaaacagcttatgacaattttcccaagtttttt 41505734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 223
Target Start/End: Complemental strand, 6557111 - 6556979
Alignment:
Q  93 cttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag--ttttttcaacttat 190  Q
    |||| |||| |||||||||||  |||| ||||||||  || |||| ||||| ||||||||| | ||||| ||| |||||| |||  |||||| | |||||    
T  6557111 cttatttgaacttatctactaacataagttttgtgagactatttgagagaacttatgaaaatagcttatgacagttttcaaaaggttttttttagcttat 6557012  T
Q  191 tttctttagttctccaatatagcttataaaaac 223  Q
    | || | ||||||  |||||| |||||||||||    
T  6557011 tgtcataagttctttaatataacttataaaaac 6556979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 48819308 - 48819275
Alignment:
Q  40 cataagctcaaaaataagccaatcaaaatgggcc 73  Q
    |||||||||||||||||||||||| |||||||||    
T  48819308 cataagctcaaaaataagccaatccaaatgggcc 48819275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 51695464 - 51695557
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||| |||| ||||  ||||||||||| ||| | |||||||| | |||||| ||||||||| | | |||||||| ||||||||| |||||    
T  51695464 ctgtttggaagaacttatataaacaacttatcacattgttcataagctattttcagcttattttcataaattctccaagatagcttatgaaaac 51695557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 4445808 - 4445745
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttc 194  Q
    |||||||||||||||||||||| || |||||||| || |||| ||| | ||||||||||||||||    
T  4445808 ctgtttgggagaatttatgaaagcagcttataac-atgttcagaagctgttttcaacttattttc 4445745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 222
Target Start/End: Original strand, 10199330 - 10199469
Alignment:
Q  84 ttggatttgcttaattgagcttatctactagaataa-cttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt-ttt 181  Q
    |||||||  |||| ||||||||||||||||  |||| |  ||||||| || |||||||||| | ||||||| | ||||| || || |||||||||| |||    
T  10199330 ttggattgacttatttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagcttatgac-atgttcataagttgttt 10199428  T
Q  182 tcaacttattttctttagttctccaatatagcttataaaaa 222  Q
    ||| ||||||||| | || |||| || ||||||||| ||||    
T  10199429 tcagcttattttcataagctctctaaaatagcttatgaaaa 10199469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 223
Target Start/End: Complemental strand, 13810150 - 13810006
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttt 179  Q
    |||| |||||| ||||| ||| |||||||||||    ||| ||||||||  || |||  ||||| ||||||| |||  |||| |||||||||| ||||||    
T  13810150 ctgtatggattggcttatttgtgcttatctactgacgtaagttttgtgagactcttttagagaacttatgaatacagtttatgacaattttcaaaagttt 13810051  T
Q  180 tt-tcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    || | | |||||||||   ||||||| ||||||| ||||||||||    
T  13810050 ttcttagcttattttcacaagttctctaatatagtttataaaaac 13810006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 79 - 223
Target Start/End: Complemental strand, 39980882 - 39980737
Alignment:
Q  79 tctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-t 177  Q
    |||||||||||| ||||  ||||||||||||||||| |||| ||||||||  ||||||  ||||| ||||||||||| ||||| ||   ||||||||| |    
T  39980882 tctgtttggattggcttgtttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaacagcttatgactggtttcataagct 39980783  T
Q  178 tttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  39980782 tttttcaacttattttcataagttctccaatatagcttataaaaac 39980737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 20880627 - 20880484
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttt 179  Q
    |||||||||| ||||| ||||||||||||||| | |||| |||  | |  || ||||||||||  |||||||||| ||||| |||||||||||||| |||    
T  20880627 tgtttggattggcttatttgagcttatctacttgcataagtttccttagactatttgggagaacctatgaaaacagcttatgacaattttcataagcttt 20880528  T
Q  180 tttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||| | ||||||||| | |||||||||||||||||| |||||||    
T  20880527 tttgagcttattttcataagttctccaatatagcttttaaaaac 20880484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 223
Target Start/End: Complemental strand, 30444027 - 30443901
Alignment:
Q  98 ttgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctt 196  Q
    ||||||||||||||| | |||| ||| ||||  |||||||| |||  ||||||||||| ||||| |||||||||| ||| |||||||| ||||||||| |    
T  30444027 ttgagcttatctactggcataaatttggtgagactgtttggtagagcttatgaaaacagcttatgacaattttcacaagcttttttcagcttattttcat 30443928  T
Q  197 tagttctccaatatagcttataaaaac 223  Q
     ||||||||||||||| ||||||||||    
T  30443927 aagttctccaatatagtttataaaaac 30443901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 902025 - 901932
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||||| || ||||||||||| || |||||| ||| |||||| |||||||||||||||||| | ||||||||||||||||||||||||||    
T  902025 ctgtttgggaaaacttatgaaaacagctaataacattttccataagcttttttcaacttattttcataagttctccaatatagcttataaaaac 901932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 31365232 - 31365359
Alignment:
Q  85 tggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagt-tttttc 183  Q
    |||||| ||||| ||||| ||||||| | | |||| ||||||||| ||||||||||||| ||||||| ||| ||||| ||||||||||||| | ||||||    
T  31365232 tggattggcttatttgagtttatctattggcataatttttgtgacactgtttgggagaacttatgaatacagcttatgacaattttcataaatctttttc 31365331  T
Q  184 aacttattttctttagttctccaatata 211  Q
    |||| |||||| | | ||||||||||||    
T  31365332 aactcattttcataaattctccaatata 31365359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 31365111 - 31365221
Alignment:
Q  85 tggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttc 183  Q
    |||||| ||||| ||||||||||||| | | |||| ||||||||  ||||||||||||| |||||||| || ||||| |||||||||||||| |||||||    
T  31365111 tggattggcttatttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaagcagcttatgacaattttcataagcttttttc 31365210  T
Q  184 aacttattttc 194  Q
    |||| ||||||    
T  31365211 aactcattttc 31365221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 223
Target Start/End: Complemental strand, 21367816 - 21367675
Alignment:
Q  83 tttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttt 181  Q
    |||||||| ||||| ||||| |||||||| || |||| |||||||   ||||||||||||| ||||||||||| ||||| ||| | |||| ||| | |||    
T  21367816 tttggattggcttatttgagattatctaccagcataagttttgtgggactgtttgggagaacttatgaaaacagcttatgacattgttcacaagctgttt 21367717  T
Q  182 tcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||| ||||||||| | |||||||||| ||||||||| |||||    
T  21367716 tcagcttattttcataagttctccaagatagcttatgaaaac 21367675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 49556951 - 49556866
Alignment:
Q  139 gagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||||||||| ||||| |||||||||||||| |||||||||||||||| ||  ||| ||||| |||||| |||||||||    
T  49556951 gagaatttatgaaaacagcttatgacaattttcataagcttttttcaacttatttcctcaagtcctccagtatagcctataaaaac 49556866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 46778121 - 46778222
Alignment:
Q  92 gcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtttt-ttcaacttat 190  Q
    ||||| |||||||||| || | | |||| ||||||||  | ||||||||||| ||||||||||||||||| ||| |||||||||||||| |||| |||||    
T  46778121 gcttatttgagcttatttagtggcataaattttgtgaaaccgtttgggagaacttatgaaaacaacttatgacatttttcataagttttgttcagcttat 46778220  T
Q  191 tt 192  Q
    ||    
T  46778221 tt 46778222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 584196 - 584060
Alignment:
Q  82 gtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttt-t 180  Q
    |||||||||  |||| ||||||||||||||||| |||| || |||||  |||||| |||||||||||||||||| ||||   || |||||||| |||| |    
T  584196 gtttggattgacttatttgagcttatctactagcataagttctgtgagactgttttggagaatttatgaaaacagcttacggcagttttcataggtttct 584097  T
Q  181 ttcaacttattttctttagttctccaatatagcttat 217  Q
    || | |||| |||| | |||||| ||| |||||||||    
T  584096 ttaagcttaatttcataagttcttcaagatagcttat 584060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 13715502 - 13715629
Alignment:
Q  92 gcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttat 190  Q
    ||||| |||| |||||||||||| |||  ||||||||  |||||||| |||| ||   |||||| ||||| |||| |||||||||  |||||||||||||    
T  13715502 gcttatttgatcttatctactagcatatgttttgtgagactgtttggtagaacttcctaaaacagcttatgacaactttcataagcatttttcaacttat 13715601  T
Q  191 tttctttagttctccaatatagcttata 218  Q
    |||| | |||| |||||||| |||||||    
T  13715602 tttcataagttgtccaatatcgcttata 13715629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 20257689 - 20257551
Alignment:
Q  80 ctgtttggatttgcttaattgagctt-atctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt 178  Q
    ||||||||||| ||||| ||||| || ||||||    |||| ||||||||  ||||||||||||| |||||||| || || || ||||||||||||||||    
T  20257689 ctgtttggattggcttatttgagttttatctacagccataaattttgtgagactgtttgggagaacttatgaaagcagctaatgacaattttcataagtt 20257590  T
Q  179 tttt-caactta-ttttctttagttctccaatatagctt 215  Q
    ||||  |||||| ||||| | || |||||||||||||||    
T  20257589 ttttaaaacttatttttcataagctctccaatatagctt 20257551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 37689377 - 37689267
Alignment:
Q  84 ttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttttttc 183  Q
    ||||||| ||||| |||||||||| ||||  ||||  || |||||  |||| |||||||| ||| ||||||| ||||| |||||||||| |  |||||||    
T  37689377 ttggattagcttatttgagcttatttactgaaataggttctgtgatactgtatgggagaacttaagaaaacagcttatgacaattttcaaagcttttttc 37689278  T
Q  184 aacttattttc 194  Q
    |||||||||||    
T  37689277 aacttattttc 37689267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 26911684 - 26911624
Alignment:
Q  133 gtttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattt 192  Q
    |||||||| ||| |||||||||| ||||| |||||||||||||||| ||||||||||||||    
T  26911684 gtttgggataatatatgaaaacagcttatgacaattttcataagtttttttcaacttattt 26911624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 24684741 - 24684883
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag--tt 178  Q
    ||||||||||  |||| ||||||||||||||| | |||| |||| |||  |  |||||  ||| ||||||||||||||||| ||||||| || |||  ||    
T  24684741 tgtttggattaacttatttgagcttatctactggcataagttttttgagacattttggttgaacttatgaaaacaacttatgacaatttgcacaagattt 24684840  T
Q  179 ttttcaacttattttctttagttctccaatatagcttataaaa 221  Q
    |||||  ||||||||||  || ||||| |||| ||||||||||    
T  24684841 ttttcgtcttattttctcaagatctccgatattgcttataaaa 24684883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 223
Target Start/End: Original strand, 24085258 - 24085400
Alignment:
Q  82 gtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tttt 180  Q
    ||||||||| ||||| ||||||||||||||  | |||| ||||||||  ||| || |||||| ||||||||||| |||||   | | |||||| | | ||    
T  24085258 gtttggattggcttatttgagcttatctaccggcataagttttgtgagactggtttggagaacttatgaaaacagcttatggtactgttcatacgctgtt 24085357  T
Q  181 ttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||| |||||||||   |||||||||| |||||||| ||||||    
T  24085358 ttcagcttattttcacaagttctccaagatagcttacaaaaac 24085400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 35696292 - 35696246
Alignment:
Q  177 ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||    
T  35696292 ttttttcaacttattttcacaagttctccaatatagcttataaaaac 35696246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 47132385 - 47132339
Alignment:
Q  177 ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||||||||||||| | | ||||||||||||||||||||||||    
T  47132385 ttttttcaacttattttcataacttctccaatatagcttataaaaac 47132339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 223
Target Start/End: Original strand, 18405752 - 18405893
Alignment:
Q  83 tttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtttttt 182  Q
    |||||||| | ||| |||||||||||||||   |||| ||||||||  |||||||  |||| |||||||||||  | |  ||| |||||||||  |||||    
T  18405752 tttggattggtttatttgagcttatctactgacataagttttgtgagactgtttgcaagaacttatgaaaacagttcacgacacttttcataatcttttt 18405851  T
Q  183 caa-cttattttctttagttctccaatatagcttataaaaac 223  Q
    ||| |||| |||| | |||||||||| ||||||||| |||||    
T  18405852 caagcttaatttcataagttctccaagatagcttatgaaaac 18405893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 211
Target Start/End: Complemental strand, 19983860 - 19983795
Alignment:
Q  146 tatgaaaacaacttataacaattttcataagttttttcaacttattttctttagttctccaatata 211  Q
    |||||||| ||||||| | | |||||||||| ||||||||||||||||| | |||||||| |||||    
T  19983860 tatgaaaataacttatgagatttttcataagctttttcaacttattttcataagttctccgatata 19983795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 20170624 - 20170531
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||||| ||| ||||||| || ||   | |||||||||| |||||||||||||||||| ||||||||| || ||| ||| |||||||    
T  20170624 ctgtttgggagaacttaagaaaacagctaatgggatttttcataagcttttttcaacttattttcattagttctcaaaaataacttgtaaaaac 20170531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 37273234 - 37273142
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||||  ||||| ||||||||||| ||| | | |||||||| |||||||||||||| | | |||||||||| ||||||||| |||||    
T  37273234 ctgtttgggagagcttatggaaacaacttatgaca-tgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaac 37273142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 214
Target Start/End: Complemental strand, 38902199 - 38902083
Alignment:
Q  98 ttgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttctt 196  Q
    ||||||||||||||| | |||| |||||  |  |||||||| |||||||||||||||| | ||| ||| | |||||| ||| |||||||||||||||| |    
T  38902199 ttgagcttatctactggcataagttttgcaaa-ctgtttggaagaatttatgaaaacagcatatgacattgttcatacgttgttttcaacttattttcat 38902101  T
Q  197 tagttctccaatatagct 214  Q
     |||||| ||| ||||||    
T  38902100 gagttcttcaagatagct 38902083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 46478764 - 46478697
Alignment:
Q  157 cttataacaattttcataag-ttttttcaacttattttctttagttctccaa--tatagcttataaaa 221  Q
    ||||| ||| |||||||||| |||||||||||||||||| | ||||||||||  ||||||||||||||    
T  46478764 cttatgacagttttcataagcttttttcaacttattttcataagttctccaatatatagcttataaaa 46478697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 216
Target Start/End: Complemental strand, 4401142 - 4401059
Alignment:
Q  134 tttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttctttagttctccaatatagctta 216  Q
    ||||| |||||||  ||||||| ||||| ||||||| |||||| | |||| ||||||||||| | |||||||||||||| ||||    
T  4401142 tttggtagaattttggaaaacagcttatgacaatttccataagctgtttttaacttattttcataagttctccaatataactta 4401059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 36631034 - 36631113
Alignment:
Q  145 ttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||| || ||||| || ||||||| ||| |||||||  ||||||||| | ||||||||||||||||| ||||||||    
T  36631034 ttatgaaaccagcttatgacgattttcaaaagcttttttctgcttattttcataagttctccaatatagctcataaaaac 36631113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 35574863 - 35574913
Alignment:
Q  157 cttataacaattttcataagttttttcaacttattttctttagttctccaa 207  Q
    ||||| |||||||||||||||||||||  ||||||||| | ||||||||||    
T  35574863 cttatgacaattttcataagttttttctgcttattttcataagttctccaa 35574913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 38276039 - 38276092
Alignment:
Q  142 aatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttc 194  Q
    ||||||||||| |||||||  ||||||||||| |||| ||||||||||||||||    
T  38276039 aatttatgaaaccaacttaagacaattttcatgagttgttttcaacttattttc 38276092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 53261838 - 53261871
Alignment:
Q  40 cataagctcaaaaataagccaatcaaaatgggcc 73  Q
    |||||||||||||||||||||||| |||||||||    
T  53261838 cataagctcaaaaataagccaatccaaatgggcc 53261871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 223
Target Start/End: Original strand, 39602141 - 39602272
Alignment:
Q  92 gcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttat 190  Q
    ||||| ||||||||| ||||| | || | ||||||||  || ||||| |||  ||||||| ||| ||||| ||| | ||||||| || ||||||||||||    
T  39602141 gcttatttgagcttagctactggcatcagttttgtgaggctatttggaagagcttatgaagacagcttatgaca-tgttcataaattgttttcaacttat 39602239  T
Q  191 tttctttagttctccaatatagcttataaaaac 223  Q
    |||| | ||||||| || ||||||||| |||||    
T  39602240 tttcataagttctcaaagatagcttatgaaaac 39602272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 51929277 - 51929369
Alignment:
Q  82 gtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcata 174  Q
    |||||||||  |||| |||| ||||| |||| | |||| ||||||||  || |||| |||||||| ||||||||  |||| ||||||||||||    
T  51929277 gtttggattgacttatttgaccttatttactggcataagttttgtgatactatttgagagaatttctgaaaacagattatgacaattttcata 51929369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 4e-31; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 19022555 - 19022647
Alignment:
Q  132 tgtttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||| | ||||||||||||||||||||||||||    
T  19022555 tgtttgggagaatttatgaaaacaacttatgacaattttcataagttgtcttcaacttattttcataagttctccaatatagcttataaaaac 19022647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 11619077 - 11619220
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttt 179  Q
    |||||||||| ||||| |||||||||||||||   ||||  ||  |||  | | ||||||||||||||||||||||||||| |||||||||||||| |||    
T  11619077 tgtttggattggcttatttgagcttatctactgacataagcttcatgaaacagattgggagaatttatgaaaacaacttatgacaattttcataagcttt 11619176  T
Q  180 tttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||||| |||| | ||||||||||  ||||||||||||||    
T  11619177 tttcaacttaatttcataagttctccaacgtagcttataaaaac 11619220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 21568454 - 21568557
Alignment:
Q  121 ttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataa 219  Q
    ||||||||  ||||||||||||| ||||||||||| |||||||||||||||||||| | ||||||||||| || | | ||||||||||||||||||||||    
T  21568454 ttttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctcttttcaacttagttccataagttctccaatatagcttataa 21568553  T
Q  220 aaac 223  Q
    ||||    
T  21568554 aaac 21568557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 80 - 223
Target Start/End: Original strand, 19302481 - 19302621
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcat-aagtt 178  Q
    ||||||| |||  |||| |||||||||||||||   |||| ||||||||   | |||||||||||||||||||||| ||||| ||||||||||| || ||    
T  19302481 ctgtttgaattgacttatttgagcttatctactgacataagttttgtgagaatatttgggagaatttatgaaaacagcttatgacaattttcataaactt 19302580  T
Q  179 ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||||||||||| | ||||||    ||||||||||||||||    
T  19302581 ttttcaacttattttcataagttct----tatagcttataaaaac 19302621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 223
Target Start/End: Complemental strand, 21196402 - 21196277
Alignment:
Q  98 ttgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctt 196  Q
    |||||||||| |||||| |||| ||||||||  |||||| | |||||||||| ||||| || || |||||||||||| | |||||| |||||||||||||    
T  21196402 ttgagcttatatactagcataagttttgtgagactgtttagaagaatttatgcaaacagct-atgacaattttcatatgctttttttaacttattttctt 21196304  T
Q  197 tagttctccaatatagcttataaaaac 223  Q
     |||||| ||||| |||||||||||||    
T  21196303 aagttctgcaataaagcttataaaaac 21196277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 223
Target Start/End: Complemental strand, 34744162 - 34744036
Alignment:
Q  98 ttgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctt 196  Q
    ||||||||||||||||  ||||  |||||||  |||||||| |||| | ||||||| ||||||| |||||||||| ||| |||||||  ||||||||  |    
T  34744162 ttgagcttatctactaacataagatttgtgagactgtttggaagaactaatgaaaagaacttatgacaattttcacaagcttttttcgccttatttttat 34744063  T
Q  197 tagttctccaatatagcttataaaaac 223  Q
     |||||||||||||||||||| |||||    
T  34744062 aagttctccaatatagcttatgaaaac 34744036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 3927931 - 3928052
Alignment:
Q  83 tttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttt 181  Q
    |||||||  ||||| |||||  |||||||||| |||| ||||||||  || |||| |||||||| | ||||||| |||| |||||||||||||| |||||    
T  3927931 tttggatcggcttatttgaggctatctactagcataagttttgtgagactatttgagagaattttttaaaacaatttatgacaattttcataagcttttt 3928030  T
Q  182 tcaacttattttctttagttct 203  Q
    ||||||||||||| | ||||||    
T  3928031 tcaacttattttcataagttct 3928052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 216
Target Start/End: Complemental strand, 420507 - 420375
Alignment:
Q  85 tggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagt-tttttc 183  Q
    |||||| ||||  |||||||| |||||| |  |||  |||||||  ||||||||||||| |||||||||||| |||| ||| |||||  |||  ||||||    
T  420507 tggattggcttctttgagcttgtctactggcttaagctttgtgagactgtttgggagaacttatgaaaacaatttatgacagttttctaaagcctttttc 420408  T
Q  184 aacttattttctttagttctccaatatagctta 216  Q
    ||||||||||| | |||||||||||||||||||    
T  420407 aacttattttcataagttctccaatatagctta 420375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 223
Target Start/End: Complemental strand, 33678927 - 33678788
Alignment:
Q  85 tggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttc 183  Q
    |||||| ||||| || | |||||||||| | |||| ||||||||  |  |||||||||| ||||||||||||||||||||| | ||||| || | |||||    
T  33678927 tggattggcttatttaaacttatctacttgcataagttttgtgagacaatttgggagaacttatgaaaacaacttataacattgttcatgagatgttttc 33678828  T
Q  184 aacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||||||   |||| ||||| ||||||||| |||||    
T  33678827 aacttattttcacaagttttccaagatagcttatgaaaac 33678788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 223
Target Start/End: Original strand, 19214347 - 19214468
Alignment:
Q  103 cttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttt-tttcaacttattttctttagtt 201  Q
    |||||||||  | |||| ||||||||   |||||||||||| ||||||||||| |  || |||||||||||||  || ||||||||||||||| | ||||    
T  19214347 cttatctacatgcataagttttgtgagattgtttgggagaacttatgaaaacagcaaatgacaattttcataaacttgtttcaacttattttcataagtt 19214446  T
Q  202 ctccaatatagcttataaaaac 223  Q
    || |||||||||||||| ||||    
T  19214447 ctacaatatagcttatacaaac 19214468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 28614530 - 28614441
Alignment:
Q  135 ttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||| ||||||||||||| |||||||||||||| ||| ||||||||  ||| |||| | |||||||||||| ||||| |||||||    
T  28614530 ttgggagaacttatgaaaacaacatataacaattttcacaagcttttttcagtttaatttcataagttctccaatacagcttttaaaaac 28614441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 33601330 - 33601470
Alignment:
Q  82 gtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tttt 180  Q
    ||||||| ||| ||| ||||||||||||| | | |||| ||||||||  || |||  ||||| ||||||||||| ||||| ||| |||||||||| ||||    
T  33601330 gtttggaattgattatttgagcttatctattggcataagttttgtgagactcttttcgagaacttatgaaaacagcttatgacacttttcataagctttt 33601429  T
Q  181 ttcaacttattttctttagttctccaatatagcttataaaa 221  Q
    |||| ||||  ||| | ||||||| || |||||||||||||    
T  33601430 ttcagcttaaattcataagttctctaagatagcttataaaa 33601470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 20526597 - 20526454
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt-t 179  Q
    ||||||||||  |||| ||||| ||||||| | | | || ||||||||  ||||||| ||||| |||||||||||  |||| ||| ||||| |||| | |    
T  20526597 tgtttggattgacttatttgagtttatctattggtagaaattttgtgagactgtttgagagaacttatgaaaacagtttatcacatttttcgtaagctgt 20526498  T
Q  180 tttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||| | ||||||||| |||||||||||| ||||||||| |||||    
T  20526497 ttttagcttattttcattagttctccaaaatagcttatgaaaac 20526454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 22940015 - 22940072
Alignment:
Q  121 ttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt 178  Q
    ||||||||  || ||||| |||| ||||||||||||||||||||||||||||||||||    
T  22940015 ttttgtgagactatttggaagaacttatgaaaacaacttataacaattttcataagtt 22940072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 39629913 - 39630019
Alignment:
Q  116 ataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagct 214  Q
    |||| |||||||  ||||||| |||||| ||  ||||||| ||||| |||||||||||||| ||||||||||||||  || | |||||| ||||||||||    
T  39629913 ataagttttgtgtgtctgtttaggagaactt--gaaaacagcttatgacaattttcataagcttttttcaacttatagtcataagttcttcaatatagct 39630010  T
Q  215 tataaaaac 223  Q
    || ||||||    
T  39630011 taaaaaaac 39630019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 223
Target Start/End: Complemental strand, 39968031 - 39967928
Alignment:
Q  121 ttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttctttagttctccaatatagcttataa 219  Q
    |||||||| |||| ||| ||||| ||||||||||| |||||  || | |||||||| | |||||||||||||||| |||||||||  | ||||||||| |    
T  39968031 ttttgtgattctggttgcgagaacttatgaaaacagcttatggcattgttcataagctgttttcaacttattttcattagttctctcagatagcttatga 39967932  T
Q  220 aaac 223  Q
    ||||    
T  39967931 aaac 39967928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 45338525 - 45338458
Alignment:
Q  155 aacttataacaattttcataagtttttt-caacttattttctttagttctccaatatagcttataaaa 221  Q
    ||||||| |||||||| || |||||||| |||||||||||| | ||||||||||||||||||| ||||    
T  45338525 aacttatgacaatttttattagtttttttcaacttattttcatcagttctccaatatagcttaaaaaa 45338458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 38138475 - 38138541
Alignment:
Q  158 ttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||| |||||||||||||| |||||||||||||||||| | |||||  |||||||||| ||||||||    
T  38138475 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaac 38138541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 182
Target Start/End: Complemental strand, 48140354 - 48140253
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttt 179  Q
    ||||||||||| ||||| | ||| ||||||| | | |||| || |||||  |||||||||||||| |||||||||| ||| |||||||||| ||||| ||    
T  48140354 ctgtttggattggctta-tagagtttatctattggcataagttatgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttataagatt 48140256  T
Q  180 ttt 182  Q
    |||    
T  48140255 ttt 48140253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 27288058 - 27288001
Alignment:
Q  121 ttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt 178  Q
    ||||||||  || ||||| |||| ||||||||||| ||||||||||||||||||||||    
T  27288058 ttttgtgagactatttggaagaacttatgaaaacagcttataacaattttcataagtt 27288001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 34036014 - 34035925
Alignment:
Q  135 ttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||| |||| ||||||||| ||||||| ||| | |||||||||| ||||||||||||||||   ||||||| || ||||||||| |||||    
T  34036014 ttggaagaacttatgaaaataacttatgacattgttcataagttgttttcaacttattttcgcaagttctctaagatagcttatgaaaac 34035925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 223
Target Start/End: Complemental strand, 48470196 - 48470052
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactaga-ataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-t 177  Q
    ||||| ||||| ||||| ||||||||||||| |||| |||| |||| |||   |||||||||||| ||||||||||| |||||  || |||||||||| |    
T  48470196 ctgttaggattggcttatttgagcttatcta-tagacataagttttatgagattgtttgggagaacttatgaaaacagcttatggcatttttcataagct 48470098  T
Q  178 tttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||| | ||||| ||| | |||| | ||| ||||||||| |||||    
T  48470097 tttttgagcttatgttcataagttattcaaaatagcttatgaaaac 48470052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 172
Target Start/End: Original strand, 4970710 - 4970802
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttca 172  Q
    |||||||||||  |||| ||||||||||||  |   |||| | ||||||  ||||||||||||| |||||||||||||||||  |||||||||    
T  4970710 ctgtttggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgggagaacttatgaaaacaacttatggcaattttca 4970802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 171
Target Start/End: Complemental strand, 9210703 - 9210664
Alignment:
Q  132 tgtttgggagaatttatgaaaacaacttataacaattttc 171  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  9210703 tgtttgggaaaatttatgaaaacaacttatgacaattttc 9210664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 30570917 - 30570992
Alignment:
Q  148 tgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaa 222  Q
    |||||||| ||||| |||||||||||||| ||||||||  ||| |||| | ||||||||||| ||| |||||||||    
T  30570917 tgaaaacagcttatgacaattttcataagcttttttcatgttaatttcataagttctccaatgtaggttataaaaa 30570992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 45593638 - 45593536
Alignment:
Q  122 tttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag--ttttttcaacttattttctttagttctccaatatagcttataa 219  Q
    |||||||  ||||||||||||| |||| |||||| || || ||| ||||||||||  ||||| ||  |||||||| | |||||||||| |||||||| ||    
T  45593638 tttgtgagactgtttgggagaacttataaaaacatctgatgacatttttcataagcttttttccagtttattttcgtaagttctccaagatagcttagaa 45593539  T
Q  220 aaa 222  Q
    |||    
T  45593538 aaa 45593536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 5947393 - 5947299
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcata 174  Q
    ||||||||||| ||||| ||||||||||||| | | |||| |||| |||  |||||||| |||| || ||||| || ||||| ||| ||||||||    
T  5947393 ctgtttggattggcttatttgagcttatctattggtataagttttatgagactgtttggaagaacttttgaaaccagcttatgacatttttcata 5947299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 46280288 - 46280334
Alignment:
Q  177 ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||| | ||||||| | ||||||||||||||||||||||||||    
T  46280288 ttttttcagcctattttcataagttctccaatatagcttataaaaac 46280334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 23215006 - 23214925
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataa-cttttgtgactctgtttgggagaatttatgaaaacaacttat 161  Q
    ||||||||||  |||| |||| |||||||||||| |||| |  || |||  ||||||| |||||||||||||||||||||||    
T  23215006 tgtttggattgacttatttgaccttatctactagcataaacacttatgagactgtttgagagaatttatgaaaacaacttat 23214925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 221
Target Start/End: Original strand, 33601962 - 33602087
Alignment:
Q  97 attgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttct 195  Q
    |||||||||||||||| | |||| |||| |||  || |||  || || ||||||||||| ||||| ||| ||||||||||  ||||||| ||||  |||     
T  33601962 attgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattca 33602061  T
Q  196 ttagttctccaatatagcttataaaa 221  Q
    | ||||||| || |||||||||||||    
T  33602062 taagttctctaagatagcttataaaa 33602087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 223
Target Start/End: Original strand, 27863655 - 27863787
Alignment:
Q  92 gcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttc-ataagttttttcaacttat 190  Q
    ||||| ||||||||||| ||| | |||| ||||||||  || |||| ||||| ||||||||||| |||   | ||||||| | || |||||||| |||||    
T  27863655 gcttatttgagcttatccactggcataagttttgtgagactatttgagagaacttatgaaaacagcttgagaaaattttcaaaaacttttttcagcttat 27863754  T
Q  191 tttctttagttctccaatatagcttataaaaac 223  Q
     ||| | ||||||| ||||||| |||| |||||    
T  27863755 gttcataagttctctaatatagtttattaaaac 27863787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 33266405 - 33266481
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaac 157  Q
    ||||||||||  |||| ||||||||||||||    |||| ||||||||  || |||||||||||||| |||||||||    
T  33266405 tgtttggattgacttatttgagcttatctaccgacataagttttgtgaaactatttgggagaatttacgaaaacaac 33266481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 219
Target Start/End: Original strand, 43045643 - 43045783
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tt 178  Q
    ||||||||||| ||||| || |||||||||||||| ||||  |||||||  |||||| |||||  ||||||||||| |||| ||||||||| ||||| ||    
T  43045643 ctgtttggattggcttatttaagcttatctactagcataagatttgtgagactgttttggagatcttatgaaaacagcttacaacaattttaataagctt 43045742  T
Q  179 ttttcaacttattttctttagttctccaatatagcttataa 219  Q
    |||||||||||||||| | ||||||||||||||| ||||||    
T  43045743 ttttcaacttattttcataagttctccaatatagtttataa 43045783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 221
Target Start/End: Complemental strand, 18133801 - 18133666
Alignment:
Q  87 gatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaa 185  Q
    |||| ||||| || |||||||||||||| |||| ||||||||  ||||||||||||  || ||||| || |||||||||||||||| ||| ||||||||     
T  18133801 gattggcttatttaagcttatctactagtataagttttgtgagactgtttgggagagcttgtgaaatcagcttataacaattttcacaagcttttttcag 18133702  T
Q  186 cttattttctttagttctccaatatagcttataaaa 221  Q
    ||||||||| | ||||||||||||||| ||||||||    
T  18133701 cttattttcataagttctccaatatagtttataaaa 18133666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 99 - 222
Target Start/End: Complemental strand, 26771398 - 26771274
Alignment:
Q  99 tgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttcttt 197  Q
    |||||||||||||  | |||| ||||||||  ||||||||||||| ||||||||||| ||||| |||||||||| |||  ||||||||||||||||| |     
T  26771398 tgagcttatctacgggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcctttttcaacttattttcata 26771299  T
Q  198 agttctccaatatagcttataaaaa 222  Q
    ||||||| |||||| ||||||||||    
T  26771298 agttctctaatatatcttataaaaa 26771274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 102 - 223
Target Start/End: Complemental strand, 28763498 - 28763376
Alignment:
Q  102 gcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag--ttttttcaacttattttctttag 199  Q
    ||||||||| ||  |||| ||||||||  ||||||||||||| ||||||||||| ||||||||||||||||||||  ||||||||||||| |||| | ||    
T  28763498 gcttatctagtaacataagttttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctttttttcaactta-tttcataag 28763400  T
Q  200 ttctccaatatagcttataaaaac 223  Q
    |||  |||||||||||||||||||    
T  28763399 ttcagcaatatagcttataaaaac 28763376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 212
Target Start/End: Original strand, 35643906 - 35644039
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tt 178  Q
    ||||| ||||| ||||| ||| ||||||||||| | |||| ||||||||  |||||||||| || ||||||||| |  |||| |||||||||||||| ||    
T  35643906 ctgttgggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctt 35644005  T
Q  179 ttttcaacttattttctttagttctccaatatag 212  Q
    |||||||||||||||| | || ||||||||||||    
T  35644006 ttttcaacttattttcataagctctccaatatag 35644039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 223
Target Start/End: Complemental strand, 12976352 - 12976221
Alignment:
Q  92 gcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttat 190  Q
    ||||| ||||||||||||||||| ||||  |||||||  |||||| | |||| |||||| |||| ||| |||||||||||| ||| |||||||| ||||     
T  12976352 gcttatttgagcttatctactagcataaggtttgtgagactgtttagtagaacttatgagaacagcttctaacaattttcaaaagcttttttcagctta- 12976254  T
Q  191 tttctttagttctccaatatagcttataaaaac 223  Q
    |||| | ||||||| ||||||||||||||||||    
T  12976253 tttcataagttctctaatatagcttataaaaac 12976221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 44792807 - 44792668
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtttt 180  Q
    |||||||||| ||||| ||||||||||||||| | |||| || |||||  |||||| |||||| |||  | ||||||||||  |||||||||||||| ||    
T  44792807 tgtttggattggcttatttgagcttatctactgggataaattatgtgagactgttttggagaacttagaacaacaacttatggcaattttcataagt-tt 44792709  T
Q  181 ttcaacttattttctttagttctccaatatagcttataaaa 221  Q
    ||||||| |||||| | | || |||||||||||||| ||||    
T  44792708 ttcaactcattttcataaattatccaatatagcttacaaaa 44792668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 212
Target Start/End: Original strand, 36963271 - 36963404
Alignment:
Q  79 tctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-t 177  Q
    |||||||||||| ||||| ||||||| ||||||| | |||| ||||||||  ||||||||||||| |||  |||||| ||| | |||||||||| ||| |    
T  36963271 tctgtttggattggcttatttgagctaatctactggcataagttttgtgagactgtttgggagaacttacaaaaacagcttttgacaattttcaaaagct 36963370  T
Q  178 tttttcaacttattttctttagttctccaatatag 212  Q
    |||| |||||||||||  ||||||||| |||||||    
T  36963371 ttttacaacttatttt-attagttctctaatatag 36963404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 223
Target Start/End: Original strand, 30251372 - 30251516
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tt 178  Q
    ||||||||||| ||||| |||||||||||||||   |||| ||| ||||  ||||||||||||| ||| ||||||| |||||  || |||||||||| ||    
T  30251372 ctgtttggattggcttatttgagcttatctactgacataagtttcgtgagactgtttgggagaacttacgaaaacagcttattgcatttttcataagctt 30251471  T
Q  179 ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||| || ||||||||| | |||  ||||| ||||||||| |||||    
T  30251472 tttacagcttattttcataagtggtccaagatagcttatgaaaac 30251516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 1058007 - 1058122
Alignment:
Q  92 gcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttttttcaacttatt 191  Q
    ||||| |||||||||||||||   |||| ||||||||  ||||||||||||| || |||||||  ||||| ||| ||||||| |||||||||  ||||||    
T  1058007 gcttatttgagcttatctacttacataagttttgtgagactgtttgggagaacttttgaaaactgcttatgacatttttcattagttttttccgcttatt 1058106  T
Q  192 ttctttagttctccaa 207  Q
    ||| | ||||||||||    
T  1058107 ttcataagttctccaa 1058122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 223
Target Start/End: Original strand, 35534544 - 35534675
Alignment:
Q  93 cttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttatt 191  Q
    |||| ||||||||||||||||  |||| ||||||||  ||||||| ||||| || |||||||| ||||| |||||||| | ||| |||||||  |||| |    
T  35534544 cttatttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttatgacaattttaacaagcttttttcggcttact 35534643  T
Q  192 ttctttagttctccaatatagcttataaaaac 223  Q
    ||| | |||||||||||||| ||||| |||||    
T  35534644 ttcataagttctccaatataacttatgaaaac 35534675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 215
Target Start/End: Original strand, 16825513 - 16825591
Alignment:
Q  137 gggagaatttatgaaaacaacttataacaattttcataagttttttcaacttattttctttagttctccaatatagctt 215  Q
    ||||||| ||||||||| | ||||| |||||||||||||| ||||||||||||||||| | |||||  |||||||||||    
T  16825513 gggagaacttatgaaaatagcttatgacaattttcataagctttttcaacttattttcataagttcggcaatatagctt 16825591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 32840917 - 32841019
Alignment:
Q  93 cttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttatt 191  Q
    |||| |||||||||||||||   | || ||||| ||  ||||||||||||| ||||||||||||||||| ||| | |||||||||| |||||| ||||||    
T  32840917 cttacttgagcttatctactcacacaagttttgcgagactgtttgggagaacttatgaaaacaacttatgacattgttcataagttgttttcagcttatt 32841016  T
Q  192 ttc 194  Q
    |||    
T  32841017 ttc 32841019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 176
Target Start/End: Original strand, 40859703 - 40859796
Alignment:
Q  82 gtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag 176  Q
    ||||||||| ||||| |||||||||||| |||  |||| ||||||||  |||||| |||| | ||||||||||| ||||| ||||||||||||||    
T  40859703 gtttggattggcttatttgagcttatctgctaacataagttttgtgaggctgttttggag-acttatgaaaacagcttatgacaattttcataag 40859796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 220
Target Start/End: Original strand, 10758188 - 10758315
Alignment:
Q  93 cttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttatt 191  Q
    |||| |||| ||||||| |||  |||| ||||||||  |||||||  |||||||||||||||| ||||| |||||||||| ||| |||||||| ||| ||    
T  10758188 cttatttgaacttatctgctaacataagttttgtgagactgtttgatagaatttatgaaaacagcttatgacaattttcaaaagcttttttcagcttgtt 10758287  T
Q  192 ttctttagttctccaatatagcttataaa 220  Q
    ||| | ||||  | |||||||||||||||    
T  10758288 ttcataagtt-gctaatatagcttataaa 10758315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 223
Target Start/End: Complemental strand, 15180691 - 15180549
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttt 179  Q
    ||||||||||| ||||| ||||| |||||||||   |||| |||| |||  || ||||| ||||||| ||||||||  || | |||||||||  |  |||    
T  15180691 ctgtttggattggcttatttgagtttatctactgccataagttttatgagactttttgg-agaatttctgaaaacaggttttgacaattttccaagtttt 15180593  T
Q  180 tttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||| |||||||||||   ||||||||||||||||||||| ||||    
T  15180592 tttaaacttattttcagaagttctccaatatagcttatagaaac 15180549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 37945694 - 37945604
Alignment:
Q  134 tttgggagaatttatgaaaacaacttataacaattttcataagt-tttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||||| || |||||||| ||||| ||||||| ||||||  ||||| |||||||||||   |||| | |||||||||||||||||||    
T  37945694 tttgggagaacttctgaaaacagcttatgacaatttccataagcattttttaacttattttcagaagttgtacaatatagcttataaaaac 37945604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 10114582 - 10114497
Alignment:
Q  139 gagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||| ||||||||||||||||||||| || ||||| | | |||||| ||||||||| |  |||||||||||||||| || |||||    
T  10114582 gagaacttatgaaaacaacttataacatttatcatatgctgttttcagcttattttcatatgttctccaatatagctaatgaaaac 10114497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 217
Target Start/End: Original strand, 35749501 - 35749626
Alignment:
Q  93 cttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcat-aagttttttcaacttatt 191  Q
    |||||||||||||||||| |   |||| ||||| ||  ||||||| ||||| ||||||||||| ||| || || ||||||| || |||||||||| ||||    
T  35749501 cttaattgagcttatctattgacataagttttgcgaggctgtttgagagaacttatgaaaacagcttgtagcatttttcataaacttttttcaacatatt 35749600  T
Q  192 ttctttagttctccaatatagcttat 217  Q
    ||| | ||||||  || |||||||||    
T  35749601 ttcataagttctttaagatagcttat 35749626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 41589687 - 41589646
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttca 172  Q
    |||||| |||||| ||||||||||||||||||||||||||||    
T  41589687 ctgttttggagaacttatgaaaacaacttataacaattttca 41589646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 223
Target Start/End: Complemental strand, 27028931 - 27028839
Alignment:
Q  132 tgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||||||| || |||||||| ||||  ||| |||||||||| | |||||| ||||||||| | || ||||||| ||||||||| |||||    
T  27028931 tgtttgggagaaattctgaaaacagcttaggacatttttcataagctattttcagcttattttcataagctctccaagatagcttatgaaaac 27028839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 29818863 - 29818943
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttat 161  Q
    |||||||||| || || ||||||||||||||||  |||| ||||||||  |||||| |||||||| || || |||||||||    
T  29818863 tgtttggattggcatatttgagcttatctactatcataagttttgtgagactgtttcggagaattaattaacacaacttat 29818943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 181
Target Start/End: Complemental strand, 40981254 - 40981155
Alignment:
Q  82 gtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttttt 181  Q
    |||| |||| ||||| ||| ||||||||||| | |||  ||||| ||  |||||||||||||  | |||||||||||||| ||| |||||||||| ||||    
T  40981254 gtttagattggcttatttgggcttatctactggtatatgttttgcgaggctgtttgggagaacatttgaaaacaacttatgacatttttcataagctttt 40981155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 165
Target Start/End: Original strand, 2487978 - 2488012
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataaca 165  Q
    ||||||||||||| |||||||||||||||||||||    
T  2487978 ctgtttgggagaacttatgaaaacaacttataaca 2488012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 212
Target Start/End: Complemental strand, 10120857 - 10120775
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttctttagttctccaatatag 212  Q
    ||||||| ||||| ||||||||||| ||||| ||| || ||||| | | |||||| ||||||||| | |||||||||||||||    
T  10120857 ctgtttgagagaacttatgaaaacagcttatgacatttatcatatgctgttttcagcttattttcataagttctccaatatag 10120775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 16736185 - 16736095
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaa 220  Q
    ||||| ||| |||||||||||||||| |||| ||||| || ||||| || |||||| |||||||| | | || |||||||||| |||||||    
T  16736185 ctgttagggggaatttatgaaaacaatttatgacaatatttataagcttctttcaagttattttcataaattttccaatatagtttataaa 16736095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 8146427 - 8146378
Alignment:
Q  134 tttgggagaatttatgaaaacaacttataacaattttcataagttttttc 183  Q
    |||||||||| |||||||||||  |||| ||| |||||||||||||||||    
T  8146427 tttgggagaacttatgaaaacagtttatgacacttttcataagttttttc 8146378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 11861892 - 11861812
Alignment:
Q  143 atttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||||||||||||| |  |||||||| ||| |||||| ||| ||||||| | ||||||| | ||||||||||||||||    
T  11861892 atttatgaaaacaacttacat-aattttcaaaagctttttttaacgtattttcataagttctctattatagcttataaaaac 11861812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 15247757 - 15247810
Alignment:
Q  142 aatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttc 194  Q
    |||||||||||||||||||| ||| | ||||| || ||||||||||||||||||    
T  15247757 aatttatgaaaacaacttatgacattgttcattagtttttttcaacttattttc 15247810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 18591893 - 18591974
Alignment:
Q  79 tctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaactta 160  Q
    |||||||| ||| | ||||||||||||||||| | | |||| |||| |||  ||||||||||||| |||| | |||||||||    
T  18591893 tctgtttgaattggtttaattgagcttatctattggtataagttttatgagactgtttgggagaacttattataacaactta 18591974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 221
Target Start/End: Complemental strand, 6882043 - 6881936
Alignment:
Q  116 ataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag--ttttttcaacttattttctttagttctccaatatagc 213  Q
    |||| ||||||||  |||||||||||||  |||||||||| || || | |||||| | |||  ||||||   ||||||||| | ||||||||||| ||||    
T  6882043 ataagttttgtgagactgtttgggagaacctatgaaaacagctcatgataattttaacaagctttttttttgcttattttcataagttctccaatttagc 6881944  T
Q  214 ttataaaa 221  Q
    ||||||||    
T  6881943 ttataaaa 6881936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 30657798 - 30657834
Alignment:
Q  187 ttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||| | ||||||||||||||||||||||||||    
T  30657798 ttattttcataagttctccaatatagcttataaaaac 30657834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 31716147 - 31716283
Alignment:
Q  82 gtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tttt 180  Q
    ||||| ||| ||||| ||||||||||||| | | |||  |||| |||  |||||| |||||| || |||||||| ||||| ||| | |||||||| ||||    
T  31716147 gtttgaattagcttatttgagcttatctattggcatattttttttgagactgtttcggagaacttttgaaaacagcttatgacattcttcataagctttt 31716246  T
Q  181 ttcaacttattttctttagttctccaatatagcttat 217  Q
    |||| |||||||   | | |||||||| |||||||||    
T  31716247 ttcagcttatttctataacttctccaagatagcttat 31716283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 38602479 - 38602411
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttat 148  Q
    |||||||||||  |||| |||||||||||||||   |||| ||||||||  ||||||||||||| ||||    
T  38602479 ctgtttggattgacttatttgagcttatctactgacataagttttgtgaggctgtttgggagaacttat 38602411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 223
Target Start/End: Complemental strand, 38648503 - 38648359
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tt 178  Q
    ||||| ||||| ||||| || || |||||||||   |||| ||||||||  ||||||||||||  ||||||||||| || || ||| || ||||||| ||    
T  38648503 ctgttaggattggcttatttaagattatctactgacataagttttgtgagactgtttgggagaccttatgaaaacagctcatgacagttctcataagctt 38648404  T
Q  179 ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||| | | || |||| | |||||| ||| ||||||||| |||||    
T  38648403 ttttaagcgtaatttcataagttctacaagatagcttatgaaaac 38648359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 43717855 - 43717927
Alignment:
Q  83 tttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaaca 155  Q
    |||||||| ||||| ||||||||||||| |   |||| ||||||||  || |||||||||| |||||||||||    
T  43717855 tttggattggcttatttgagcttatctattgacataagttttgtgagactatttgggagaacttatgaaaaca 43717927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 220
Target Start/End: Complemental strand, 34430866 - 34430726
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttt 179  Q
    ||||||||||| ||||| ||||||||||| ||| |||||| |||||| |   ||||||||| |||||||||||||||||||| |||||||||||| | ||    
T  34430866 ctgtttggattggcttatttgagcttatcaact-gaataagttttgtaagattgtttgggataatttatgaaaacaacttatgacaattttcatatgctt 34430768  T
Q  180 tttc-aacttattttctttagttctccaatatagcttataaa 220  Q
    |||| ||||||||||| | |||||| | || | |||||||||    
T  34430767 tttcaaacttattttcataagttcttcgatcttgcttataaa 34430726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 6536715 - 6536623
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||||||||||||| ||| || |||| | ||||||||||||| |||||||||||||||||| | | |||||||||||||||| |||||||    
T  6536715 ctgtttgggagaatttatcaaa-cagcttacagcaattttcataagcttttttcaacttattttcataaattctccaatatagcttctaaaaac 6536623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 35099137 - 35099074
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcataagttttttcaacttattttc 194  Q
    ||||||||||||||||| ||||||| || || ||| ||||| ||||||||||||||||||||||    
T  35099137 ctgtttgggagaatttaggaaaacagctaatgacatttttcgtaagttttttcaacttattttc 35099074  T

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Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 30926671 - 30926557
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagttt 179  Q
    |||||||| || ||||| |||||||||| | || | |||| |||  |||  |||||||| |||| ||||||||||| ||||| |||||||||||  ||||    
T  30926671 ctgtttggtttggcttatttgagcttattttctggcataaatttgatgagactgtttggaagaacttatgaaaacagcttatgacaattttcatgggttt 30926572  T
Q  180 tttcaacttattttc 194  Q
    ||||||||| |||||    
T  30926571 tttcaactttttttc 30926557  T

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Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 34863245 - 34863188
Alignment:
Q  138 ggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttc 194  Q
    ||||||||||| |||||||||||| |||||||| ||||||| ||||||||||||||||    
T  34863245 ggagaatttataaaaacaacttattacaattttaataagtttttttcaacttattttc 34863188  T

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Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 176
Target Start/End: Original strand, 9559344 - 9559436
Alignment:
Q  84 ttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag 176  Q
    |||||||||| |||||||| ||||||| | | |||| ||||||||  |||||| |||||| ||||||||||| |||| |||| | ||||||||    
T  9559344 ttggatttgcctaattgagattatctattggcataagttttgtgagactgtttaggagaagttatgaaaacagcttacaacattgttcataag 9559436  T

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Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 203
Target Start/End: Original strand, 34882339 - 34882463
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt- 178  Q
    |||||||||||  |||| || | |||||||||||| |||| ||||||    |||||| |||||||||||||||| || |||| ||| | ||||||||||     
T  34882339 ctgtttggattgacttatttcatcttatctactagtataagttttgttggactgtttaggagaatttatgaaaataagttatgacattgttcataagttg 34882438  T
Q  179 ttttcaacttattttctttagttct 203  Q
    ||||| |||||||||| | ||||||    
T  34882439 ttttccacttattttcataagttct 34882463  T

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Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 848140 - 848026
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tt 178  Q
    |||||||||||  |||| ||||||||||||| ||| |||| ||||||||  |||||||| |||| |||| |||||  ||||| ||| ||||| |||| ||    
T  848140 ctgtttggattgccttatttgagcttatcta-tagcataagttttgtgagactgtttggaagaacttataaaaactgcttatgacatttttcttaagctt 848042  T
Q  179 ttttcaacttattttc 194  Q
    |||||| |||||||||    
T  848041 ttttcagcttattttc 848026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 6200658 - 6200567
Alignment:
Q  134 tttgggagaatttatgaaaacaacttataacaattttcataagt-tttttc-aacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||| |||||||| |||||| | |||||||||||||| |||| | |||||| ||| ||||||| ||||||||||||||||  ||||||||||    
T  6200658 tttgtgagaatttttgaaaataccttataacaatttttataaatatttttctaacatattttcattagttctccaatatattttataaaaac 6200567  T

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Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 6016359 - 6016437
Alignment:
Q  146 tatgaaaacaacttataacaattttcataagtttt-ttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||||||||||| |   |||||||||||||| |||||||||||||  |  |||||||||||||| ||||||||||    
T  6016359 tatgaaaacaacttattatggttttcataagtttttttcaacttatttttatatgttctccaatatagtttataaaaac 6016437  T

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Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 20368153 - 20368242
Alignment:
Q  134 tttgggagaatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||||| ||||||||||||||||| || || |||||||| |  ||||||||||||||| | |||||||||| | ||||||| |||||    
T  20368153 tttgggagaacttatgaaaacaacttatgac-atgttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaac 20368242  T

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Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 4163304 - 4163215
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaatttt 170  Q
    |||||||||| ||||| ||||||||||||||| | |||| ||||  ||  ||||| | |||||  |||||||||||||||| ||||||||    
T  4163304 tgtttggattggcttatttgagcttatctactggcataagttttacgagactgttcgtgagaacctatgaaaacaacttatgacaatttt 4163215  T

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Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 4224925 - 4224836
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaatttt 170  Q
    |||||||||| ||||| ||||||||||||||| | |||| ||||  ||  ||||| | |||||  |||||||||||||||| ||||||||    
T  4224925 tgtttggattggcttatttgagcttatctactggcataagttttacgagactgttcgtgagaacctatgaaaacaacttatgacaatttt 4224836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 9763644 - 9763568
Alignment:
Q  148 tgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    |||||||| ||||| ||| |||| ||||| ||||||||||||| |||| | |||||| ||||||||||||| |||||    
T  9763644 tgaaaacagcttatgacacttttgataagcttttttcaacttaatttcataagttctacaatatagcttatgaaaac 9763568  T

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Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 29754068 - 29754160
Alignment:
Q  131 ctgtttgggagaatttatgaaaacaacttataacaattttcata-agttttttcaacttattttctttagttctccaatatagcttataaaaa 222  Q
    ||||||||||||| ||| ||||||| |||||    ||||||||| | | |||||||||||||||  | ||||||||||||||| |||||||||    
T  29754068 ctgtttgggagaacttacgaaaacagcttatgcatattttcatagaatgttttcaacttatttttataagttctccaatatagtttataaaaa 29754160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 119
Target Start/End: Complemental strand, 32861691 - 32861655
Alignment:
Q  83 tttggatttgcttaattgagcttatctactagaataa 119  Q
    |||||||||||||| ||||||||||||||||||||||    
T  32861691 tttggatttgcttatttgagcttatctactagaataa 32861655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 218
Target Start/End: Complemental strand, 2455122 - 2455004
Alignment:
Q  98 ttgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttctt 196  Q
    |||| |||||||||||  |||| ||||||||  ||||||||||||| || |||||||   |||| ||| | |||||||  | |||||| ||||||||| |    
T  2455122 ttgaacttatctactaacataagttttgtgagactgtttgggagaacttctgaaaac---ttatgacattgttcataacctgttttcagcttattttcat 2455026  T
Q  197 tagttctccaatatagcttata 218  Q
    ||||||||||| ||| ||||||    
T  2455025 tagttctccaacataacttata 2455004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 18611184 - 18611134
Alignment:
Q  121 ttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttc 171  Q
    ||||||||| ||||||| || || ||||||||||||||||||||| |||||    
T  18611184 ttttgtgacactgtttgagataacttatgaaaacaacttataacacttttc 18611134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 2455393 - 2455296
Alignment:
Q  98 ttgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataagtt-ttttcaacttattttc 194  Q
    |||||||||||||| |  |||| ||| ||||  || |||| ||||| ||||||||||||||||| ||| | || ||||||| |||||| |||||||||    
T  2455393 ttgagcttatctacaaacataagtttggtgaaactatttgagagaacttatgaaaacaacttattacattgtttataagttgttttcagcttattttc 2455296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 9559460 - 9559538
Alignment:
Q  81 tgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttat 161  Q
    |||||||||| ||||| ||| ||||||||| | | |||| ||||| |||| |  ||||||||| |||||||||||||||||    
T  9559460 tgtttggattggcttagttgcgcttatctattggcataaattttgagactat--ttgggagaacttatgaaaacaacttat 9559538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 12836164 - 12836231
Alignment:
Q  155 aacttataacaattttcataag--ttttttcaacttattttctttagttctccaatatagcttataaa 220  Q
    ||||||| ||||||||||||||  ||||| |||||||||||| | |||| |  |||||||||||||||    
T  12836164 aacttatgacaattttcataaggttttttacaacttattttcgtaagttttttaatatagcttataaa 12836231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 30536564 - 30536520
Alignment:
Q  177 ttttttcaacttattttctttagttctccaatatagcttataaaa 221  Q
    |||||||||||||||||| | | ||||||||||||||| ||||||    
T  30536564 ttttttcaacttattttcataaattctccaatatagctaataaaa 30536520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 217
Target Start/End: Complemental strand, 22383 - 22245
Alignment:
Q  80 ctgtttggatttgcttaattgagcttatctactagaataacttttgtgactctgtttgggagaatttatgaaaacaacttataacaattttcataag-tt 178  Q
    ||||| ||||||||||| || |||||||||| | | |||| ||||||||  |||||  ||| || ||||  ||||| ||||| ||||||||| |||| ||    
T  22383 ctgttaggatttgcttattttagcttatctaatggcataagttttgtgagcctgttccggaaaacttatagaaacagcttatgacaattttcgtaagctt 22284  T
Q  179 ttttcaacttattttctttagttctccaatatagcttat 217  Q
    |||||| ||||||||| | |||| ||||| |||||||||    
T  22283 ttttcagcttattttcataagttttccaacatagcttat 22245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 58832 - 58750
Alignment:
Q  142 aatttatgaaaacaacttataacaattttcataag-ttttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||| ||  |||| |||||||||||||| ||||||||||||| |||| | |||||| ||| ||||||||| |||||    
T  58832 aatttatgaaagcagtttatgacaattttcataagcttttttcaacttaatttcataagttcttcaacatagcttatgaaaac 58750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 23683 - 23639
Alignment:
Q  179 ttttcaacttattttctttagttctccaatatagcttataaaaac 223  Q
    ||||||||||||||||   ||||||||||||||||||||||||||    
T  23683 ttttcaacttattttcacaagttctccaatatagcttataaaaac 23639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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