View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15940_high_18 (Length: 342)
Name: NF15940_high_18
Description: NF15940
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15940_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 21 - 332
Target Start/End: Original strand, 39180908 - 39181219
Alignment:
| Q |
21 |
tcaagtatatgctgcctttcataaaaagtgctgcatattctattttgccaccataatccatttcaattagagttttaggcaccggagtgagaactaaccg |
120 |
Q |
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| T |
39180908 |
tcaagtatatgctgcctttcataaaaagtgctgcatattctattttgccaccataatccatttcaattagagttttaggcaccggagtgagaactagccg |
39181007 |
T |
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| Q |
121 |
aacacctgttttgttttaagttaccggagtgagtgctaaccttgaatcgttgtggtttgatctgaaatggtgctacctttcaattaagacttcagcttcc |
220 |
Q |
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| T |
39181008 |
aacacctgttttgttttaagttaccggagtgagtgctaaccttgaatcgttgtggtttgatctgaaatggtgctacctttcaattaagacttcagcttcc |
39181107 |
T |
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| Q |
221 |
ggagtgagcaccagcccaatattgttgcagcttggttttgcttattgttaagcgtcatgttttctagtttttgcccttgagagttaagctttggcagctt |
320 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
39181108 |
ggagtgagcaccagcccaatattgttgcagcttggttttgcttattgttaagcgtcatgttttctagtttttgccctagagagttaagctttggcagctt |
39181207 |
T |
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| Q |
321 |
ctttcctctgtg |
332 |
Q |
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|||||||||||| |
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| T |
39181208 |
ctttcctctgtg |
39181219 |
T |
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