View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15940_high_32 (Length: 233)
Name: NF15940_high_32
Description: NF15940
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15940_high_32 |
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Alignment Details
Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 15 - 217
Target Start/End: Complemental strand, 43395337 - 43395138
Alignment:
| Q |
15 |
tgaacctaatagccgtccgggagattgatcacaacgtgaaggagaagaagcaacgacgagtcttgcttcttgcaaccattcttgtgttaaccttgcactg |
114 |
Q |
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| T |
43395337 |
tgaacctaatagccgtccgggagatt---cacaacgtgaaggagaagaagcaacgacgagtcttgcttcttgcaaccattcttgtgttaaccttgcactg |
43395241 |
T |
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| Q |
115 |
ttacttctagtactatcatcgaaaccatcatcttcctcatcatcatccatgttcataccaaccccaccagtgaggtcataggttttctggtgagtgtcca |
214 |
Q |
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| T |
43395240 |
ttacttctagtactatcatcgaaaccatcatcttcctcatcatcatccatgttcataccaaccccaccagtgaggtcataggttttctggtgagtgtcta |
43395141 |
T |
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