View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15941_high_108 (Length: 311)
Name: NF15941_high_108
Description: NF15941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15941_high_108 |
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Alignment Details
Target: chr3 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 26492056 - 26491764
Alignment:
| Q |
1 |
aaaatcaaaaagcgatatatttttagggaagaaaaacatatttaattctaattgaaaatgattatgtaaattttactaagcttttagatattgttttgag |
100 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
26492056 |
aaaatcaaaaagcgatatatttttagggaacaaaaacatatttaattctaattgaaaatgattatgtaaattttactaagcttttagatattgttttaag |
26491957 |
T |
|
| Q |
101 |
ttgacaccattcatgtatgtattgcagttagagaagcagaagaactagactggggaatgagaaagaggatagctatgggaatagcttactgtctagacca |
200 |
Q |
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||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26491956 |
ttg-caccattcatgtatatattgcagttagagaagcagaagagctagactggggaatgagaaagaggatagctatgggaatagcttactgtctagacca |
26491858 |
T |
|
| Q |
201 |
catgcatcaactcacaccacccatttcccacagaaatctgttatcttcttctatatacctcactgaagattatgctgctaaaatatcagacctt |
294 |
Q |
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||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
26491857 |
catgcataatctcacaccacccatttcccacagaaatctgttatcttcttctatatacctaactgaagattatgctgctaaaatatcagacctt |
26491764 |
T |
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